F374385

General Info

Members Datasets Scaffolds Average Seq Length
266 168 532 563

Family's Representative Sequence

Representative Sequence 3300050511|nmdc:mga08y16_19485_c1|nmdc:mga08y16_19485_c1_3267_5021
Length 579
Sequence MCFFEQWDTFGRTFKGVFFATINGISMPNLLLASLPSSFLSVHRCNIDTSMKRLQIRQLVLLLSTTLVLLSCMQSAAPQPQSGNTQIDRDLTEVSVTALQSMYASGKYTVTQVTQWHLDRIARYDGVYKSFLHVDSAGALATARAEDAAKRTAGSSFRPGPLWGIPMAVKGNTSVKGLVTINGWEGYTIPGRELTAPADASIVTKLKAAGAVILGHTNLPDFAAADTTISSAGGRTGNAYNWRFSPGGSSGGTASFAVLGTGTDTSNSIRLPSGASGLVGVLPTRGLTSINGIHPLDWLLDNTGPMARNVTDAAITLGVMAGEDAKDFRTLGSSTKAQPGPYLQYLKKDALKGKRFGVPSFIMDDAALRPETRDMFMKAIERLRSEGATIVANDAVLGGSFEALTEAIQTRPYLRDGLERFLQEFGPAQYHSTTEYARIVGSSLPQFFVGMPVRNLQTDPAAESNFWGPQRRALTAYQETLEQYRLDGFVYPALQMPPNDETVRQPGGGQSEGPHTRTGWTNTIGVPAVVVPGGIYSNGLPFGIEFSARPWKDGDLLGWAFAYEQATQFRKPPVLTDRN

Samples

Sample ID Description Type Environment
1 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
54 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
77 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
78 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
79 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
80 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
81 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
82 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
121 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
125 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
126 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
127 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
128 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
129 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
130 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
131 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
132 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
133 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
134 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
135 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
136 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
137 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
138 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
139 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
140 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
141 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
142 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
143 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
144 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
145 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
148 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
153 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
154 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
155 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
156 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
159 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
160 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
161 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
165 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
166 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
167 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
168 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0.75
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.01
Nodule 0
Rhizoplane 4.51
Rhizosphere 91.73
Stem 0
Stem Tuber 0
Unclassified 9.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga08y16_19485_c1 3300050511 Bacteria 7152
2 Ga0065712_10000691 3300005290 Bacteria 16475
3 Ga0065715_10000241 3300005293 Bacteria 25430
4 Ga0070658_10105611 3300005327 Bacteria 2330
5 Ga0070676_10013455 3300005328 Unclassified 4483
6 Ga0070676_10038630 3300005328 Bacteria 2758
7 Ga0070683_100059447 3300005329 Bacteria 3551
8 Ga0070690_100027034 3300005330 Bacteria 3544
9 Ga0070670_100002643 3300005331 Bacteria 14812
10 Ga0070670_100114420 3300005331 Bacteria 2326
11 Ga0070680_100010707 3300005336 Bacteria 7080
12 Ga0070680_100024114 3300005336 Unclassified 4855
13 Ga0068868_100015891 3300005338 Bacteria 5578
14 Ga0070660_100005354 3300005339 Bacteria 8880
15 Ga0070689_100020611 3300005340 Bacteria 4894
16 Ga0070687_100002486 3300005343 Bacteria 6936
17 Ga0070661_100003510 3300005344 Bacteria 10799
18 Ga0070668_100060742 3300005347 Bacteria 2928
19 Ga0070668_100097871 3300005347 Unclassified 2321
20 Ga0070669_100015174 3300005353 Bacteria 5487
21 Ga0070669_100075186 3300005353 Unclassified 2505
22 Ga0070675_100000061 3300005354 Bacteria 66703
23 Ga0070675_100000714 3300005354 Bacteria 23102
24 Ga0070675_100001039 3300005354 Bacteria 19977
25 Ga0070675_100004165 3300005354 Bacteria 10981
26 Ga0070671_100006700 3300005355 Bacteria 9213
27 Ga0070673_100010458 3300005364 Bacteria 6283
28 Ga0070673_100013427 3300005364 Bacteria 5665
29 Ga0070673_100023588 3300005364 Bacteria 4497
30 Ga0070688_100039287 3300005365 Bacteria 2895
31 Ga0070688_100047299 3300005365 Bacteria 2668
32 Ga0070688_100060398 3300005365 Bacteria 2393
33 Ga0070659_100031014 3300005366 Unclassified 4139
34 Ga0070659_100096647 3300005366 Unclassified 2373
35 Ga0070667_100054610 3300005367 Bacteria 3373
36 Ga0070714_100023317 3300005435 Bacteria 5083
37 Ga0070714_100055507 3300005435 Bacteria 3386
38 Ga0070701_10061600 3300005438 Bacteria 1979
39 Ga0070663_100046281 3300005455 Bacteria 3078
40 Ga0070662_100022473 3300005457 Bacteria 4319
41 Ga0070681_10077074 3300005458 Bacteria 3292
42 Ga0070681_10103996 3300005458 Bacteria 2783
43 Ga0068867_100052339 3300005459 Bacteria 3013
44 Ga0070685_10012146 3300005466 Bacteria 4518
45 Ga0070685_10019906 3300005466 Bacteria 3627
46 Ga0070679_100027994 3300005530 Bacteria 5553
47 Ga0070684_100077829 3300005535 Unclassified 2929
48 Ga0070672_100069081 3300005543 Bacteria 2804
49 Ga0070686_100025496 3300005544 Bacteria 3558
50 Ga0070665_100029718 3300005548 Bacteria 5499
51 Ga0070665_100057797 3300005548 Bacteria 3889
52 Ga0070665_100123979 3300005548 Bacteria 2586
53 Ga0068855_100000283 3300005563 Bacteria 62643
54 Ga0068855_100009062 3300005563 Bacteria 12025
55 Ga0068855_100102139 3300005563 Bacteria 3300
56 Ga0070664_100007988 3300005564 Bacteria 8547
57 Ga0070664_100009031 3300005564 Bacteria 8086
58 Ga0070664_100009889 3300005564 Bacteria 7731
59 Ga0070664_100053808 3300005564 Bacteria 3413
60 Ga0068854_100087554 3300005578 Bacteria 2311
61 Ga0068852_100021823 3300005616 Bacteria 5122
62 Ga0068859_100002156 3300005617 Bacteria 20001
63 Ga0068864_100003522 3300005618 Bacteria 12945
64 Ga0068851_10026688 3300005834 Unclassified 2841
65 Ga0068870_10064266 3300005840 Bacteria 1982
66 Ga0068863_100000177 3300005841 Bacteria 67749
67 Ga0068858_100025380 3300005842 Bacteria 5514
68 Ga0068858_100031437 3300005842 Unclassified 4930
69 Ga0068858_100087274 3300005842 Bacteria 2901
70 Ga0068860_100010871 3300005843 Bacteria 8977
71 Ga0070717_10000121 3300006028 Bacteria 60014
72 Ga0070712_100037031 3300006175 Unclassified 3323
73 Ga0075367_10019931 3300006178 Bacteria 3727
74 Ga0075366_10003426 3300006195 Bacteria 8359
75 Ga0075366_10050344 3300006195 Bacteria 2473
76 Ga0097621_100003426 3300006237 Bacteria 10925
77 Ga0097621_100031125 3300006237 Unclassified 4231
78 Ga0068871_100098456 3300006358 Bacteria 2447
79 Ga0075428_100010906 3300006844 Bacteria 10108
80 Ga0075428_100100893 3300006844 Bacteria 3147
81 Ga0075433_10054121 3300006852 Bacteria 3501
82 Ga0075434_100013484 3300006871 Bacteria 7781
83 Ga0075434_100033519 3300006871 Bacteria 5069
84 Ga0097620_100002156 3300006931 Bacteria 20001
85 Ga0075435_100039445 3300007076 Bacteria 3768
86 Ga0105240_10000987 3300009093 Bacteria 50763
87 Ga0105240_10004848 3300009093 Bacteria 20269
88 Ga0105240_10050354 3300009093 Bacteria 5252
89 Ga0105240_10073177 3300009093 Bacteria 4232
90 Ga0111539_10003764 3300009094 Bacteria 19971
91 Ga0111539_10004534 3300009094 Bacteria 18164
92 Ga0111539_10006469 3300009094 Bacteria 15090
93 Ga0111539_10048441 3300009094 Bacteria 5073
94 Ga0111539_10061285 3300009094 Unclassified 4457
95 Ga0111539_10160684 3300009094 Bacteria 2628
96 Ga0105245_10060267 3300009098 Bacteria 3418
97 Ga0105247_10031980 3300009101 Bacteria 3195
98 Ga0114129_10000783 3300009147 Bacteria 40711
99 Ga0114129_10002602 3300009147 Bacteria 25091
100 Ga0114129_10007060 3300009147 Bacteria 15990
101 Ga0114129_10026807 3300009147 Bacteria 8160
102 Ga0105243_10023959 3300009148 Bacteria 4651
103 Ga0105243_10041447 3300009148 Bacteria 3601
104 Ga0105242_10079845 3300009176 Viruses 2733
105 Ga0105248_10000483 3300009177 Bacteria 45473
106 Ga0105248_10005837 3300009177 Bacteria 13531
107 Ga0105248_10023105 3300009177 Bacteria 6906
108 Ga0105248_10036140 3300009177 Bacteria 5525
109 Ga0105248_10071869 3300009177 Bacteria 3888
110 Ga0105237_10007602 3300009545 Bacteria 11843
111 Ga0105238_10082910 3300009551 Bacteria 3196
112 Ga0105238_10099481 3300009551 Bacteria 2891
113 Ga0105249_10081010 3300009553 Bacteria 3017
114 Ga0105239_10018839 3300010375 Bacteria 7626
115 Ga0157374_10053848 3300013296 Bacteria 3752
116 Ga0157374_10059155 3300013296 Bacteria 3582
117 Ga0157378_10007881 3300013297 Bacteria 9295
118 Ga0163162_10000637 3300013306 Bacteria 32481
119 Ga0163162_10096622 3300013306 Bacteria 3043
120 Ga0157372_10016850 3300013307 Bacteria 7844
121 Ga0157375_10001494 3300013308 Bacteria 20078
122 Ga0157375_10036385 3300013308 Bacteria 4709
123 Ga0157375_10071201 3300013308 Bacteria 3489
124 Ga0163163_10048892 3300014325 Bacteria 4161
125 Ga0163163_10083718 3300014325 Bacteria 3195
126 Ga0163163_10153613 3300014325 Bacteria 2345
127 Ga0157380_10003336 3300014326 Bacteria 11020
128 Ga0157377_10004168 3300014745 Bacteria 6606
129 Ga0157379_10000189 3300014968 Bacteria 47351
130 Ga0157379_10025167 3300014968 Bacteria 5284
131 Ga0157376_10093477 3300014969 Bacteria 2611
132 Ga0157376_10151869 3300014969 Bacteria 2089
133 Ga0163161_10014539 3300017792 Bacteria 5479
134 Ga0163161_10023302 3300017792 Bacteria 4367
135 Ga0213872_10001282 3300021361 Bacteria 16816
136 Ga0228598_1000013 3300024227 Bacteria 24982
137 Ga0207697_10001849 3300025315 Bacteria 11324
138 Ga0207645_10001351 3300025907 Bacteria 20143
139 Ga0207645_10059585 3300025907 Bacteria 2438
140 Ga0207643_10017793 3300025908 Bacteria 3891
141 Ga0207705_10049186 3300025909 Unclassified 3035
142 Ga0207707_10010391 3300025912 Bacteria 8078
143 Ga0207707_10083910 3300025912 Bacteria 2782
144 Ga0207695_10003254 3300025913 Bacteria 23089
145 Ga0207695_10011170 3300025913 Bacteria 10895
146 Ga0207671_10010292 3300025914 Bacteria 7730
147 Ga0207671_10020488 3300025914 Bacteria 5032
148 Ga0207693_10039717 3300025915 Bacteria 3705
149 Ga0207660_10069449 3300025917 Bacteria 2558
150 Ga0207662_10022824 3300025918 Bacteria 3591
151 Ga0207657_10001501 3300025919 Bacteria 24948
152 Ga0207657_10110060 3300025919 Bacteria 2276
153 Ga0207649_10075100 3300025920 Unclassified 2171
154 Ga0207681_10012716 3300025923 Bacteria 5199
155 Ga0207681_10032244 3300025923 Bacteria 3429
156 Ga0207650_10002232 3300025925 Bacteria 13528
157 Ga0207650_10027064 3300025925 Bacteria 4100
158 Ga0207650_10038349 3300025925 Bacteria 3498
159 Ga0207650_10120621 3300025925 Bacteria 2041
160 Ga0207659_10000141 3300025926 Bacteria 42371
161 Ga0207659_10027858 3300025926 Bacteria 3832
162 Ga0207687_10035959 3300025927 Bacteria 3372
163 Ga0207644_10026871 3300025931 Bacteria 3973
164 Ga0207644_10072064 3300025931 Bacteria 2529
165 Ga0207690_10033624 3300025932 Unclassified 3298
166 Ga0207690_10105759 3300025932 Bacteria 2018
167 Ga0207690_10107139 3300025932 Unclassified 2007
168 Ga0207706_10000350 3300025933 Bacteria 49761
169 Ga0207706_10014035 3300025933 Bacteria 7265
170 Ga0207706_10043044 3300025933 Bacteria 4002
171 Ga0207686_10013290 3300025934 Bacteria 4552
172 Ga0207665_10003549 3300025939 Bacteria 10419
173 Ga0207691_10000661 3300025940 Bacteria 34030
174 Ga0207691_10001425 3300025940 Bacteria 23862
175 Ga0207691_10037550 3300025940 Bacteria 4486
176 Ga0207711_10000890 3300025941 Bacteria 28793
177 Ga0207711_10035616 3300025941 Bacteria 4220
178 Ga0207711_10061434 3300025941 Bacteria 3240
179 Ga0207689_10003882 3300025942 Bacteria 13621
180 Ga0207661_10048524 3300025944 Bacteria 3375
181 Ga0207679_10003985 3300025945 Bacteria 9172
182 Ga0207679_10005387 3300025945 Bacteria 8015
183 Ga0207679_10017134 3300025945 Bacteria 4824
184 Ga0207679_10026484 3300025945 Bacteria 3998
185 Ga0207667_10000696 3300025949 Bacteria 43589
186 Ga0207651_10014805 3300025960 Bacteria 4515
187 Ga0207651_10014935 3300025960 Bacteria 4498
188 Ga0207651_10092308 3300025960 Bacteria 2220
189 Ga0207712_10017294 3300025961 Bacteria 4682
190 Ga0207712_10071044 3300025961 Bacteria 2503
191 Ga0207658_10025814 3300025986 Bacteria 4115
192 Ga0207658_10031377 3300025986 Bacteria 3772
193 Ga0207677_10007246 3300026023 Bacteria 6114
194 Ga0207703_10007682 3300026035 Bacteria 8545
195 Ga0207678_10046637 3300026067 Bacteria 3747
196 Ga0207641_10000472 3300026088 Bacteria 45544
197 Ga0207641_10069688 3300026088 Bacteria 3021
198 Ga0207648_10044603 3300026089 Unclassified 3890
199 Ga0207674_10000394 3300026116 Bacteria 56421
200 Ga0207674_10006258 3300026116 Bacteria 14026
201 Ga0207674_10039932 3300026116 Bacteria 4862
202 Ga0207675_100001519 3300026118 Bacteria 23273
203 Ga0207698_10064902 3300026142 Bacteria 2864
204 Ga0207428_10003629 3300027907 Bacteria 14876
205 Ga0207428_10027992 3300027907 Unclassified 4686
206 Ga0207428_10077442 3300027907 Bacteria 2603
207 Ga0207428_10093428 3300027907 Unclassified 2333
208 Ga0268266_10064209 3300028379 Bacteria 3171
209 Ga0268265_10026540 3300028380 Bacteria 4122
210 Ga0268265_10065756 3300028380 Bacteria 2800
211 Ga0268264_10122515 3300028381 Bacteria 2293
212 Ga0265762_1005547 3300030760 Bacteria 2262
213 Ga0265760_10015255 3300031090 Bacteria 2202
214 Ga0265331_10045275 3300031250 Bacteria 2124
215 Ga0307516_10000131 3300031730 Bacteria 89180
216 Ga0307413_10106719 3300031824 Bacteria 1865
217 Ga0373939_0014379 3300035114 Bacteria 2053
218 Ga0373931_0060966 3300035691 Unclassified 2033
219 Ga0373925_0002922 3300037068 Bacteria 13479
220 Ga0395898_0006860 3300037466 Bacteria 12112
221 Ga0395901_0042256 3300038443 Bacteria 4726
222 Ga0436361_0056287 3300039447 Bacteria 40350
223 Ga0436363_0638216 3300039450 Bacteria 2218
224 Ga0439434_0010736 3300042435 Bacteria 2702
225 Ga0466959_0062923 3300045049 Bacteria 2696
226 Ga0466958_0003573 3300045836 Bacteria 8097
227 Ga0495580_0001939 3300046472 Bacteria 18188
228 Ga0495628_0153816 3300046516 Unclassified 1751
229 Ga0495640_0054520 3300046533 Unclassified 2738
230 Ga0495669_0026963 3300046684 Bacteria 2512
231 Ga0495613_0019777 3300046689 Bacteria 5018
232 Ga0495684_0017921 3300047471 Bacteria 5456
233 Ga0495602_0118963 3300048088 Unclassified 2130
234 Ga0496102_0005694 3300048905 Bacteria 10581
235 Ga0496102_0089165 3300048905 Bacteria 2853
236 Ga0496104_0019428 3300048907 Bacteria 6217
237 Ga0496105_0190335 3300048908 Bacteria 1678
238 Ga0496107_0093589 3300048910 Bacteria 2198
239 Ga0496108_0009272 3300048911 Bacteria 7964
240 Ga0496109_0003519 3300048912 Bacteria 13078
241 Ga0496110_0141420 3300048913 Bacteria 2176
242 Ga0496112_0017114 3300048915 Bacteria 6805
243 Ga0496112_0029720 3300048915 Bacteria 5287
244 Ga0496113_0072626 3300048916 Bacteria 2619
245 Ga0496114_0005472 3300048917 Bacteria 9936
246 Ga0501033_0027598 3300049570 Bacteria 4269
247 Ga0501047_0137593 3300049581 Unclassified 2322
248 nmdc:mga00v17_71198_c1 3300050491 Bacteria 2155
249 nmdc:mga0k408_13198_c1 3300050493 Bacteria 4527
250 nmdc:mga06z11_26575_c1 3300050494 Bacteria 2756
251 nmdc:mga07m45_7240_c1 3300050496 Bacteria 5660
252 nmdc:mga05p37_239390_c1 3300050507 Bacteria 2183
253 nmdc:mga05p37_307_c1 3300050507 Bacteria 51565
254 nmdc:mga05p37_3862_c1 3300050507 Bacteria 17527
255 nmdc:mga06r32_28161_c1 3300050510 Bacteria 5254
256 nmdc:mga08y16_1661_c1 3300050511 Bacteria 22561
257 nmdc:mga08y16_3616_c1 3300050511 Bacteria 16060
258 nmdc:mga08y16_79992_c1 3300050511 Unclassified 3407
259 nmdc:mga08y16_8500_c1 3300050511 Bacteria 10750
260 nmdc:mga0n895_136427_c1 3300050512 Bacteria 2480
261 nmdc:mga0n895_26809_c1 3300050512 Bacteria 5465
262 nmdc:mga0n895_44595_c1 3300050512 Bacteria 4324
263 nmdc:mga08x19_17747_c1 3300050514 Unclassified 4358
264 nmdc:mga0a205_26263_c1 3300050515 Bacteria 5550
265 Ga0495619_0001526 3300053085 Bacteria 15263
266 Ga0500556_0003519 3300053104 Bacteria 4588
267 nmdc:mga08y16_19485_c1
268 Ga0065712_10000691
269 Ga0065715_10000241
270 Ga0070658_10105611
271 Ga0070676_10013455
272 Ga0070676_10038630
273 Ga0070683_100059447
274 Ga0070690_100027034
275 Ga0070670_100002643
276 Ga0070670_100114420
277 Ga0070680_100010707
278 Ga0070680_100024114
279 Ga0068868_100015891
280 Ga0070660_100005354
281 Ga0070689_100020611
282 Ga0070687_100002486
283 Ga0070661_100003510
284 Ga0070668_100060742
285 Ga0070668_100097871
286 Ga0070669_100015174
287 Ga0070669_100075186
288 Ga0070675_100000061
289 Ga0070675_100000714
290 Ga0070675_100001039
291 Ga0070675_100004165
292 Ga0070671_100006700
293 Ga0070673_100010458
294 Ga0070673_100013427
295 Ga0070673_100023588
296 Ga0070688_100039287
297 Ga0070688_100047299
298 Ga0070688_100060398
299 Ga0070659_100031014
300 Ga0070659_100096647
301 Ga0070667_100054610
302 Ga0070714_100023317
303 Ga0070714_100055507
304 Ga0070701_10061600
305 Ga0070663_100046281
306 Ga0070662_100022473
307 Ga0070681_10077074
308 Ga0070681_10103996
309 Ga0068867_100052339
310 Ga0070685_10012146
311 Ga0070685_10019906
312 Ga0070679_100027994
313 Ga0070684_100077829
314 Ga0070672_100069081
315 Ga0070686_100025496
316 Ga0070665_100029718
317 Ga0070665_100057797
318 Ga0070665_100123979
319 Ga0068855_100000283
320 Ga0068855_100009062
321 Ga0068855_100102139
322 Ga0070664_100007988
323 Ga0070664_100009031
324 Ga0070664_100009889
325 Ga0070664_100053808
326 Ga0068854_100087554
327 Ga0068852_100021823
328 Ga0068859_100002156
329 Ga0068864_100003522
330 Ga0068851_10026688
331 Ga0068870_10064266
332 Ga0068863_100000177
333 Ga0068858_100025380
334 Ga0068858_100031437
335 Ga0068858_100087274
336 Ga0068860_100010871
337 Ga0070717_10000121
338 Ga0070712_100037031
339 Ga0075367_10019931
340 Ga0075366_10003426
341 Ga0075366_10050344
342 Ga0097621_100003426
343 Ga0097621_100031125
344 Ga0068871_100098456
345 Ga0075428_100010906
346 Ga0075428_100100893
347 Ga0075433_10054121
348 Ga0075434_100013484
349 Ga0075434_100033519
350 Ga0097620_100002156
351 Ga0075435_100039445
352 Ga0105240_10000987
353 Ga0105240_10004848
354 Ga0105240_10050354
355 Ga0105240_10073177
356 Ga0111539_10003764
357 Ga0111539_10004534
358 Ga0111539_10006469
359 Ga0111539_10048441
360 Ga0111539_10061285
361 Ga0111539_10160684
362 Ga0105245_10060267
363 Ga0105247_10031980
364 Ga0114129_10000783
365 Ga0114129_10002602
366 Ga0114129_10007060
367 Ga0114129_10026807
368 Ga0105243_10023959
369 Ga0105243_10041447
370 Ga0105242_10079845
371 Ga0105248_10000483
372 Ga0105248_10005837
373 Ga0105248_10023105
374 Ga0105248_10036140
375 Ga0105248_10071869
376 Ga0105237_10007602
377 Ga0105238_10082910
378 Ga0105238_10099481
379 Ga0105249_10081010
380 Ga0105239_10018839
381 Ga0157374_10053848
382 Ga0157374_10059155
383 Ga0157378_10007881
384 Ga0163162_10000637
385 Ga0163162_10096622
386 Ga0157372_10016850
387 Ga0157375_10001494
388 Ga0157375_10036385
389 Ga0157375_10071201
390 Ga0163163_10048892
391 Ga0163163_10083718
392 Ga0163163_10153613
393 Ga0157380_10003336
394 Ga0157377_10004168
395 Ga0157379_10000189
396 Ga0157379_10025167
397 Ga0157376_10093477
398 Ga0157376_10151869
399 Ga0163161_10014539
400 Ga0163161_10023302
401 Ga0213872_10001282
402 Ga0228598_1000013
403 Ga0207697_10001849
404 Ga0207645_10001351
405 Ga0207645_10059585
406 Ga0207643_10017793
407 Ga0207705_10049186
408 Ga0207707_10010391
409 Ga0207707_10083910
410 Ga0207695_10003254
411 Ga0207695_10011170
412 Ga0207671_10010292
413 Ga0207671_10020488
414 Ga0207693_10039717
415 Ga0207660_10069449
416 Ga0207662_10022824
417 Ga0207657_10001501
418 Ga0207657_10110060
419 Ga0207649_10075100
420 Ga0207681_10012716
421 Ga0207681_10032244
422 Ga0207650_10002232
423 Ga0207650_10027064
424 Ga0207650_10038349
425 Ga0207650_10120621
426 Ga0207659_10000141
427 Ga0207659_10027858
428 Ga0207687_10035959
429 Ga0207644_10026871
430 Ga0207644_10072064
431 Ga0207690_10033624
432 Ga0207690_10105759
433 Ga0207690_10107139
434 Ga0207706_10000350
435 Ga0207706_10014035
436 Ga0207706_10043044
437 Ga0207686_10013290
438 Ga0207665_10003549
439 Ga0207691_10000661
440 Ga0207691_10001425
441 Ga0207691_10037550
442 Ga0207711_10000890
443 Ga0207711_10035616
444 Ga0207711_10061434
445 Ga0207689_10003882
446 Ga0207661_10048524
447 Ga0207679_10003985
448 Ga0207679_10005387
449 Ga0207679_10017134
450 Ga0207679_10026484
451 Ga0207667_10000696
452 Ga0207651_10014805
453 Ga0207651_10014935
454 Ga0207651_10092308
455 Ga0207712_10017294
456 Ga0207712_10071044
457 Ga0207658_10025814
458 Ga0207658_10031377
459 Ga0207677_10007246
460 Ga0207703_10007682
461 Ga0207678_10046637
462 Ga0207641_10000472
463 Ga0207641_10069688
464 Ga0207648_10044603
465 Ga0207674_10000394
466 Ga0207674_10006258
467 Ga0207674_10039932
468 Ga0207675_100001519
469 Ga0207698_10064902
470 Ga0207428_10003629
471 Ga0207428_10027992
472 Ga0207428_10077442
473 Ga0207428_10093428
474 Ga0268266_10064209
475 Ga0268265_10026540
476 Ga0268265_10065756
477 Ga0268264_10122515
478 Ga0265762_1005547
479 Ga0265760_10015255
480 Ga0265331_10045275
481 Ga0307516_10000131
482 Ga0307413_10106719
483 Ga0373939_0014379
484 Ga0373931_0060966
485 Ga0373925_0002922
486 Ga0395898_0006860
487 Ga0395901_0042256
488 Ga0436361_0056287
489 Ga0436363_0638216
490 Ga0439434_0010736
491 Ga0466959_0062923
492 Ga0466958_0003573
493 Ga0495580_0001939
494 Ga0495628_0153816
495 Ga0495640_0054520
496 Ga0495669_0026963
497 Ga0495613_0019777
498 Ga0495684_0017921
499 Ga0495602_0118963
500 Ga0496102_0005694
501 Ga0496102_0089165
502 Ga0496104_0019428
503 Ga0496105_0190335
504 Ga0496107_0093589
505 Ga0496108_0009272
506 Ga0496109_0003519
507 Ga0496110_0141420
508 Ga0496112_0017114
509 Ga0496112_0029720
510 Ga0496113_0072626
511 Ga0496114_0005472
512 Ga0501033_0027598
513 Ga0501047_0137593
514 nmdc:mga00v17_71198_c1
515 nmdc:mga0k408_13198_c1
516 nmdc:mga06z11_26575_c1
517 nmdc:mga07m45_7240_c1
518 nmdc:mga05p37_239390_c1
519 nmdc:mga05p37_307_c1
520 nmdc:mga05p37_3862_c1
521 nmdc:mga06r32_28161_c1
522 nmdc:mga08y16_1661_c1
523 nmdc:mga08y16_3616_c1
524 nmdc:mga08y16_79992_c1
525 nmdc:mga08y16_8500_c1
526 nmdc:mga0n895_136427_c1
527 nmdc:mga0n895_26809_c1
528 nmdc:mga0n895_44595_c1
529 nmdc:mga08x19_17747_c1
530 nmdc:mga0a205_26263_c1
531 Ga0495619_0001526
532 Ga0500556_0003519

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01425

Amidase

Amidase

112

557

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ac3-assembly1.cif.gz_A crystal structure of pam12a 0.8337 29 549
1m22-assembly2.cif.gz_B x-ray structure of native peptide amidase from stenotrophomonas maltophilia at 1.4 a 0.8328 29 548
1m21-assembly2.cif.gz_B crystal structure analysis of the peptide amidase pam in complex with the competitive inhibitor chymostatin 0.8251 29 548
5ac3-assembly1.cif.gz_A crystal structure of pam12a 0.8194 29 549
1m22-assembly2.cif.gz_B x-ray structure of native peptide amidase from stenotrophomonas maltophilia at 1.4 a 0.8166 29 548
ID Description Score Start End Superfamily
1m22A00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8333 29 548 3.90.1300.10
4gyrA01 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8267 29 553 3.90.1300.10
af_A0A1P8B760_22_510_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8255 1 548 3.90.1300.10
af_A0A1P8B760_22_510_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8239 1 548 3.90.1300.10
2dqnA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.823 29 537 3.90.1300.10
ID Description Score Start End GO Terms
AF-A0A382BA98-F1-model_v4 Amidase domain-containing protein 0.9364 22 267 GO:0003824
AF-U7ULL3-F1-model_v4 Amidase domain protein 0.9288 24 267 GO:0003824
AF-A0A382RLN9-F1-model_v4 Amidase domain-containing protein 0.9218 22 349 GO:0003824
AF-A0A3C0SA14-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA 0.9159 27 271 GO:0016740
AF-A0A382BA98-F1-model_v4 Amidase domain-containing protein 0.9148 22 267 GO:0003824

Map