F374151

General Info

Members Datasets Scaffolds Average Seq Length
266 202 532 321

Family's Representative Sequence

Representative Sequence 3300028379|Ga0268266_10078851|Ga0268266_100788511
Length 364
Sequence MILCCYARPGRAFITRQTTMMNPAPKIITTAPALFHSPCRSRRVLIICAAGLAALASVATALAADDYPTKAIKVVVPVQPGFTTDAVARIVAEKLQMKLGKPVVVENRAGGAGGNVGTEAVARSTPDGYTLLVASPGPLAINKYLYPKLAFDPTEFVPISLLASAVNVLVVRADSPIRSVRDLITYAKANPGKLSYASGGAGTTQHLATELLKSQGGNLDIFHVPYKGSAPAMQGFLQGQGDIMFAELGSTLPHIKSGKLRAIAVGGTTRNQAVPDVPTMSETLPGFVTTAWYGLVAPPKTPPAIAAMLSSAVAEIVKDPDVNARLRNMNLQPAGSTPAELATLVREEGDRWGKVIRAAKITVE

Samples

Sample ID Description Type Environment
1 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
6 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
7 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
8 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
24 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
25 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
31 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
73 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
75 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
115 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
116 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
119 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
120 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
121 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
122 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
123 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
124 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
125 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
128 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
129 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
130 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
131 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
132 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
133 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
134 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
135 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
136 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
137 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
138 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
139 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
140 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
141 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
142 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
143 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
144 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
145 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
146 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
147 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
148 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
149 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
150 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
151 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
152 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
153 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
154 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
155 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
156 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
157 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
158 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
159 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
160 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
161 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
162 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
163 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
164 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
165 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
166 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
167 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
168 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
169 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
170 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
171 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
172 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
178 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
179 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
180 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
181 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
182 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
183 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
184 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
185 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
186 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
187 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
188 2643221569 Achromobacter sp. Root565 Isolate Unclassified
189 2643221594 Achromobacter sp. Root170 Isolate Unclassified
190 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
191 2643221621 Achromobacter sp. Root83 Isolate Unclassified
192 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
193 2831864461 Roseateles noduli HZ7 Isolate Nodule
194 2855730933 Achromobacter sp. HZ28 Isolate Nodule
195 2855767633 Achromobacter sp. HZ34 Isolate Nodule
196 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
197 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
198 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
199 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
200 2941479691
201 8048746797 Alcaligenes endophyticus DSM 100498 Isolate Unclassified
202 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.48
Metatranscriptomes 0
Isolates 7.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.02
Nodule 1.13
Rhizoplane 8.27
Rhizosphere 65.41
Stem 0
Stem Tuber 0
Unclassified 0.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0268266_10078851 3300028379 Bacteria 2867
2 JGI25151J46595_10000857 3300003187 Bacteria 24191
3 JGI25406J46586_10000099 3300003203 Bacteria 38165
4 JGI25153J46596_10007912 3300003215 Bacteria 5157
5 Ga0055526_1009351 3300003771 Bacteria 4728
6 Ga0055536_1004112 3300003781 Bacteria 7556
7 Ga0055540_1002450 3300003792 Bacteria 9789
8 Ga0055531_10001933 3300003794 Bacteria 14480
9 Ga0055531_10025554 3300003794 Bacteria 2140
10 Ga0070658_10016305 3300005327 Bacteria 5946
11 Ga0070676_10132101 3300005328 Bacteria 1580
12 Ga0070683_100010005 3300005329 Bacteria 8134
13 Ga0070690_100030612 3300005330 Bacteria 3346
14 Ga0070666_10223543 3300005335 Bacteria 1328
15 Ga0068868_100333407 3300005338 Bacteria 1295
16 Ga0070660_100015750 3300005339 Bacteria 5469
17 Ga0070689_100053805 3300005340 Bacteria 3116
18 Ga0070689_100183101 3300005340 Bacteria 1702
19 Ga0070687_100046267 3300005343 Bacteria 2226
20 Ga0070661_100000924 3300005344 Bacteria 21054
21 Ga0070668_100222012 3300005347 Bacteria 1559
22 Ga0070668_100252252 3300005347 Bacteria 1465
23 Ga0070669_100010792 3300005353 Bacteria 6485
24 Ga0070675_100040649 3300005354 Bacteria 3797
25 Ga0070671_100047717 3300005355 Bacteria 3561
26 Ga0070674_100056294 3300005356 Bacteria 2726
27 Ga0070674_100136377 3300005356 Bacteria 1836
28 Ga0070673_100145661 3300005364 Bacteria 2002
29 Ga0070688_100022792 3300005365 Bacteria 3676
30 Ga0070659_100065322 3300005366 Bacteria 2882
31 Ga0070714_100002617 3300005435 Bacteria 13269
32 Ga0070662_100104097 3300005457 Bacteria 2153
33 Ga0068867_100404590 3300005459 Bacteria 1152
34 Ga0070685_10037167 3300005466 Bacteria 2757
35 Ga0070706_100345001 3300005467 Bacteria 1388
36 Ga0070679_100055365 3300005530 Bacteria 3950
37 Ga0070684_100001236 3300005535 Bacteria 18340
38 Ga0068853_100026292 3300005539 Bacteria 4887
39 Ga0070672_100102099 3300005543 Bacteria 2327
40 Ga0070665_100029095 3300005548 Bacteria 5561
41 Ga0070665_100060037 3300005548 Bacteria 3812
42 Ga0070665_100125248 3300005548 Bacteria 2572
43 Ga0070704_100045904 3300005549 Bacteria 3043
44 Ga0068855_100001592 3300005563 Bacteria 28507
45 Ga0070664_100000444 3300005564 Bacteria 31204
46 Ga0070664_100490550 3300005564 Bacteria 1131
47 Ga0068857_100000450 3300005577 Bacteria 29306
48 Ga0068854_100030045 3300005578 Bacteria 3766
49 Ga0068856_100015829 3300005614 Bacteria 7293
50 Ga0068852_100004891 3300005616 Bacteria 9514
51 Ga0068864_100120175 3300005618 Bacteria 2349
52 Ga0068861_100326518 3300005719 Bacteria 1338
53 Ga0068851_10024979 3300005834 Bacteria 2928
54 Ga0068863_100041383 3300005841 Bacteria 4381
55 Ga0068863_100227146 3300005841 Bacteria 1800
56 Ga0081539_10000322 3300005985 Bacteria 106875
57 Ga0081539_10008583 3300005985 Bacteria 8838
58 Ga0075366_10018620 3300006195 Bacteria 4010
59 Ga0097621_100425141 3300006237 Bacteria 1193
60 Ga0068871_100206485 3300006358 Bacteria 1698
61 Ga0075430_100000184 3300006846 Bacteria 41914
62 Ga0075430_100197968 3300006846 Bacteria 1669
63 Ga0075436_100083249 3300006914 Bacteria 2220
64 Ga0105240_10000933 3300009093 Bacteria 51939
65 Ga0114129_10222697 3300009147 Bacteria 2544
66 Ga0105243_10203380 3300009148 Bacteria 1738
67 Ga0105241_10373988 3300009174 Bacteria 1243
68 Ga0105248_10018648 3300009177 Bacteria 7671
69 Ga0105248_10155811 3300009177 Bacteria 2578
70 Ga0105237_10449151 3300009545 Bacteria 1295
71 Ga0105238_10001076 3300009551 Bacteria 27590
72 Ga0157373_10005352 3300013100 Bacteria 9644
73 Ga0157370_10002186 3300013104 Bacteria 23850
74 Ga0157370_10006235 3300013104 Bacteria 13208
75 Ga0157369_10011135 3300013105 Bacteria 10227
76 Ga0157374_10496025 3300013296 Unclassified 1225
77 Ga0157372_10002866 3300013307 Bacteria 18643
78 Ga0163163_10591699 3300014325 Bacteria 1173
79 Ga0157380_10016927 3300014326 Bacteria 5385
80 Ga0157380_10111493 3300014326 Bacteria 2300
81 Ga0157380_10390916 3300014326 Unclassified 1316
82 Ga0182008_10040420 3300014497 Bacteria 2329
83 Ga0182008_10121632 3300014497 Bacteria 1298
84 Ga0163161_10067349 3300017792 Bacteria 2615
85 Ga0209673_1020673 3300025273 Bacteria 2325
86 Ga0209676_1003402 3300025292 Bacteria 9841
87 Ga0209025_1000003 3300025294 Bacteria 1366495
88 Ga0209564_1000005 3300025295 Bacteria 1147192
89 Ga0209758_1000240 3300025297 Bacteria 114169
90 Ga0209050_1000827 3300025298 Bacteria 42937
91 Ga0209051_1001753 3300025303 Bacteria 17262
92 Ga0209051_1010199 3300025303 Bacteria 4772
93 Ga0209257_1004148 3300025304 Bacteria 11526
94 Ga0207656_10019031 3300025321 Bacteria 2712
95 Ga0207682_10005514 3300025893 Bacteria 5154
96 Ga0207645_10131887 3300025907 Bacteria 1626
97 Ga0207654_10070686 3300025911 Bacteria 2073
98 Ga0207707_10173785 3300025912 Bacteria 1882
99 Ga0207695_10024385 3300025913 Bacteria 6809
100 Ga0207662_10154788 3300025918 Bacteria 1460
101 Ga0207657_10055220 3300025919 Bacteria 3432
102 Ga0207649_10003627 3300025920 Bacteria 8431
103 Ga0207652_10031473 3300025921 Bacteria 4456
104 Ga0207681_10296831 3300025923 Bacteria 1277
105 Ga0207694_10005271 3300025924 Bacteria 9960
106 Ga0207659_10089481 3300025926 Bacteria 2296
107 Ga0207659_10177740 3300025926 Bacteria 1684
108 Ga0207659_10219249 3300025926 Bacteria 1528
109 Ga0207664_10005985 3300025929 Bacteria 8328
110 Ga0207644_10100222 3300025931 Bacteria 2175
111 Ga0207690_10008503 3300025932 Bacteria 6089
112 Ga0207691_10013471 3300025940 Bacteria 7824
113 Ga0207691_10092472 3300025940 Bacteria 2709
114 Ga0207711_10128320 3300025941 Bacteria 2271
115 Ga0207661_10006678 3300025944 Bacteria 8160
116 Ga0207679_10001441 3300025945 Bacteria 14953
117 Ga0207667_10003753 3300025949 Bacteria 18711
118 Ga0207668_10034809 3300025972 Bacteria 3348
119 Ga0207668_10055203 3300025972 Bacteria 2760
120 Ga0207668_10192342 3300025972 Bacteria 1618
121 Ga0207640_10021895 3300025981 Bacteria 3817
122 Ga0207658_10020997 3300025986 Bacteria 4528
123 Ga0207658_10039345 3300025986 Bacteria 3412
124 Ga0207703_10192660 3300026035 Bacteria 1807
125 Ga0207639_10121700 3300026041 Bacteria 2145
126 Ga0207678_10058638 3300026067 Bacteria 3312
127 Ga0207702_10008048 3300026078 Bacteria 8920
128 Ga0207641_10135779 3300026088 Bacteria 2214
129 Ga0207676_10147594 3300026095 Bacteria 2021
130 Ga0207674_10000118 3300026116 Bacteria 92408
131 Ga0207675_100354943 3300026118 Bacteria 1437
132 Ga0207698_10004060 3300026142 Bacteria 8890
133 Ga0268266_10070739 3300028379 Bacteria 3023
134 Ga0268266_10089106 3300028379 Bacteria 2701
135 Ga0268266_10200325 3300028379 Bacteria 1827
136 Ga0268265_10093665 3300028380 Bacteria 2407
137 Ga0268264_10060428 3300028381 Bacteria 3176
138 Ga0307412_10000290 3300031911 Bacteria 31888
139 Ga0307412_10000460 3300031911 Bacteria 24510
140 Ga0307416_100151194 3300032002 Bacteria 2129
141 Ga0373951_0031499 3300035091 Bacteria 1251
142 Ga0373931_0016429 3300035691 Bacteria 3642
143 Ga0373931_0023810 3300035691 Bacteria 3094
144 Ga0373925_0293419 3300037068 Bacteria 1312
145 Ga0395905_0005728 3300037471 Bacteria 12634
146 Ga0395905_0034521 3300037471 Bacteria 4749
147 Ga0439433_0007774 3300041999 Bacteria 2318
148 Ga0450911_001085 3300042115 Bacteria 6833
149 Ga0450898_007084 3300042134 Bacteria 1739
150 Ga0439446_0006432 3300042156 Bacteria 3061
151 Ga0453683_0019560 3300044673 Bacteria 4335
152 Ga0466965_0151018 3300044683 Bacteria 1214
153 Ga0466970_0037069 3300044765 Bacteria 2584
154 Ga0451576_0003667 3300045051 Bacteria 20840
155 Ga0466967_0242660 3300045976 Bacteria 1719
156 Ga0495638_0018189 3300046460 Bacteria 4670
157 Ga0495638_0045728 3300046460 Bacteria 2753
158 Ga0495638_0051622 3300046460 Bacteria 2565
159 Ga0495583_0001067 3300046506 Bacteria 30637
160 Ga0495610_0013049 3300046512 Bacteria 4959
161 Ga0495616_0000974 3300046513 Bacteria 20508
162 Ga0495616_0022292 3300046513 Bacteria 3420
163 Ga0495620_0019594 3300046515 Bacteria 3323
164 Ga0495631_0000031 3300046518 Bacteria 85555
165 Ga0495637_0009838 3300046520 Bacteria 4649
166 Ga0495643_0000259 3300046522 Bacteria 77609
167 Ga0495648_0152531 3300046524 Bacteria 1204
168 Ga0495587_0092952 3300046536 Bacteria 1742
169 Ga0495598_0069142 3300046537 Bacteria 1108
170 Ga0495609_0000244 3300046538 Bacteria 51384
171 Ga0495621_0001901 3300046539 Bacteria 5486
172 Ga0495621_0012230 3300046539 Bacteria 2673
173 Ga0495621_0030033 3300046539 Bacteria 1856
174 Ga0495656_0010682 3300046615 Bacteria 3345
175 Ga0495656_0176571 3300046615 Bacteria 1047
176 Ga0495625_0013887 3300046660 Bacteria 6451
177 Ga0495661_0058047 3300046665 Bacteria 2308
178 Ga0495670_0013272 3300046691 Bacteria 4052
179 Ga0495671_0003940 3300046692 Bacteria 9003
180 Ga0495626_0001196 3300048091 Bacteria 21538
181 Ga0495626_0021515 3300048091 Bacteria 3200
182 Ga0496100_0005383 3300048903 Bacteria 6888
183 Ga0496101_0004707 3300048904 Bacteria 8639
184 Ga0496102_0064110 3300048905 Bacteria 3365
185 Ga0496104_0008049 3300048907 Bacteria 9350
186 Ga0496105_0016191 3300048908 Bacteria 5948
187 Ga0496105_0070711 3300048908 Bacteria 2885
188 Ga0496106_0115500 3300048909 Bacteria 2093
189 Ga0496107_0041859 3300048910 Bacteria 3290
190 Ga0496107_0092523 3300048910 Bacteria 2211
191 Ga0496108_0457068 3300048911 Bacteria 1115
192 Ga0496109_0086232 3300048912 Bacteria 2899
193 Ga0496109_0124157 3300048912 Bacteria 2406
194 Ga0496110_0032080 3300048913 Bacteria 4534
195 Ga0496110_0034037 3300048913 Bacteria 4410
196 Ga0496110_0524093 3300048913 Bacteria 1078
197 Ga0496111_0214184 3300048914 Bacteria 1431
198 Ga0496112_0190528 3300048915 Bacteria 2013
199 Ga0496112_0279056 3300048915 Bacteria 1618
200 Ga0496113_0085229 3300048916 Bacteria 2427
201 Ga0496114_0004071 3300048917 Bacteria 11291
202 Ga0496114_0094582 3300048917 Bacteria 2542
203 Ga0496116_0000485 3300048919 Bacteria 54705
204 Ga0496117_0005360 3300048920 Bacteria 13510
205 Ga0496117_0072046 3300048920 Bacteria 2313
206 Ga0496118_0005976 3300048921 Bacteria 13580
207 Ga0496118_0013998 3300048921 Bacteria 7535
208 Ga0496119_0007489 3300048922 Bacteria 9814
209 Ga0496119_0121783 3300048922 Bacteria 1433
210 Ga0496120_0012350 3300048923 Bacteria 5819
211 Ga0496121_0000164 3300048924 Bacteria 145421
212 Ga0496121_0012566 3300048924 Bacteria 9210
213 Ga0496121_0025586 3300048924 Bacteria 5594
214 Ga0496121_0035158 3300048924 Bacteria 4495
215 Ga0496122_0000102 3300048925 Bacteria 197296
216 Ga0496122_0007960 3300048925 Bacteria 11584
217 Ga0496122_0061322 3300048925 Bacteria 2761
218 Ga0496123_0000742 3300048926 Bacteria 52830
219 Ga0496123_0003111 3300048926 Bacteria 19028
220 Ga0496123_0048777 3300048926 Bacteria 2845
221 Ga0496124_0000004 3300048927 Bacteria 976131
222 Ga0496124_0000007 3300048927 Bacteria 883534
223 Ga0496125_0000190 3300048928 Bacteria 132540
224 Ga0496125_0000414 3300048928 Bacteria 79745
225 Ga0496125_0010227 3300048928 Bacteria 9510
226 Ga0496125_0014375 3300048928 Bacteria 7713
227 Ga0496125_0088517 3300048928 Bacteria 2333
228 Ga0496126_0004648 3300048929 Bacteria 16233
229 Ga0496126_0009262 3300048929 Bacteria 10491
230 Ga0496126_0095096 3300048929 Bacteria 2614
231 Ga0501033_0006641 3300049570 Bacteria 9047
232 Ga0501034_0111826 3300049571 Bacteria 2722
233 Ga0501037_0226392 3300049573 Bacteria 1314
234 Ga0501047_0117558 3300049581 Bacteria 2540
235 Ga0501035_0069644 3300049822 Bacteria 3117
236 Ga0501044_0050993 3300049823 Bacteria 4268
237 nmdc:mga0k408_5063_c1 3300050493 Bacteria 6982
238 nmdc:mga0qj67_83_c1 3300050509 Bacteria 63959
239 nmdc:mga06r32_551033_c1 3300050510 Bacteria 1127
240 nmdc:mga08x19_25221_c1 3300050514 Bacteria 3702
241 Ga0500610_0000920 3300053079 Bacteria 9507
242 Ga0500651_0011698 3300053093 Bacteria 5300
243 Ga0500554_026412 3300053102 Bacteria 1668
244 Ga0500594_0000057 3300053118 Bacteria 34625
245 Ga0500595_000950 3300053119 Bacteria 16349
246 Ga0500595_005717 3300053119 Bacteria 5385
247 2599905367 2599185292 Bacteria 6290804
248 2643858870 2643221569 Bacteria 6064337
249 2643981207 2643221594 Bacteria 5811388
250 2643981965 2643221594 Bacteria 5811388
251 2644029191 2643221603 Bacteria 6147767
252 2644120734 2643221621 Bacteria 6212786
253 2644122734 2643221621 Bacteria 6212786
254 2809034068 2808606395 Bacteria 6020352
255 2809035056 2808606395 Bacteria 6020352
256 2831868309 2831864461 Bacteria 6502356
257 2855734117 2855730933 Bacteria 7047938
258 2855769707 2855767633 Bacteria 7049357
259 2857543823 2857542790 Bacteria 5326616
260 2857546130 2857542790 Bacteria 5326616
261 2881414046 2881412998 Bacteria 6492157
262 2894777071 2894772417 Bacteria 5305674
263 2929205890 2929199973 Bacteria 7260745
264 2941480553
265 8048748191 8048746797 Bacteria 3557226
266 8055912365 8055909800 Bacteria 7278581
267 Ga0268266_10078851
268 JGI25151J46595_10000857
269 JGI25406J46586_10000099
270 JGI25153J46596_10007912
271 Ga0055526_1009351
272 Ga0055536_1004112
273 Ga0055540_1002450
274 Ga0055531_10001933
275 Ga0055531_10025554
276 Ga0070658_10016305
277 Ga0070676_10132101
278 Ga0070683_100010005
279 Ga0070690_100030612
280 Ga0070666_10223543
281 Ga0068868_100333407
282 Ga0070660_100015750
283 Ga0070689_100053805
284 Ga0070689_100183101
285 Ga0070687_100046267
286 Ga0070661_100000924
287 Ga0070668_100222012
288 Ga0070668_100252252
289 Ga0070669_100010792
290 Ga0070675_100040649
291 Ga0070671_100047717
292 Ga0070674_100056294
293 Ga0070674_100136377
294 Ga0070673_100145661
295 Ga0070688_100022792
296 Ga0070659_100065322
297 Ga0070714_100002617
298 Ga0070662_100104097
299 Ga0068867_100404590
300 Ga0070685_10037167
301 Ga0070706_100345001
302 Ga0070679_100055365
303 Ga0070684_100001236
304 Ga0068853_100026292
305 Ga0070672_100102099
306 Ga0070665_100029095
307 Ga0070665_100060037
308 Ga0070665_100125248
309 Ga0070704_100045904
310 Ga0068855_100001592
311 Ga0070664_100000444
312 Ga0070664_100490550
313 Ga0068857_100000450
314 Ga0068854_100030045
315 Ga0068856_100015829
316 Ga0068852_100004891
317 Ga0068864_100120175
318 Ga0068861_100326518
319 Ga0068851_10024979
320 Ga0068863_100041383
321 Ga0068863_100227146
322 Ga0081539_10000322
323 Ga0081539_10008583
324 Ga0075366_10018620
325 Ga0097621_100425141
326 Ga0068871_100206485
327 Ga0075430_100000184
328 Ga0075430_100197968
329 Ga0075436_100083249
330 Ga0105240_10000933
331 Ga0114129_10222697
332 Ga0105243_10203380
333 Ga0105241_10373988
334 Ga0105248_10018648
335 Ga0105248_10155811
336 Ga0105237_10449151
337 Ga0105238_10001076
338 Ga0157373_10005352
339 Ga0157370_10002186
340 Ga0157370_10006235
341 Ga0157369_10011135
342 Ga0157374_10496025
343 Ga0157372_10002866
344 Ga0163163_10591699
345 Ga0157380_10016927
346 Ga0157380_10111493
347 Ga0157380_10390916
348 Ga0182008_10040420
349 Ga0182008_10121632
350 Ga0163161_10067349
351 Ga0209673_1020673
352 Ga0209676_1003402
353 Ga0209025_1000003
354 Ga0209564_1000005
355 Ga0209758_1000240
356 Ga0209050_1000827
357 Ga0209051_1001753
358 Ga0209051_1010199
359 Ga0209257_1004148
360 Ga0207656_10019031
361 Ga0207682_10005514
362 Ga0207645_10131887
363 Ga0207654_10070686
364 Ga0207707_10173785
365 Ga0207695_10024385
366 Ga0207662_10154788
367 Ga0207657_10055220
368 Ga0207649_10003627
369 Ga0207652_10031473
370 Ga0207681_10296831
371 Ga0207694_10005271
372 Ga0207659_10089481
373 Ga0207659_10177740
374 Ga0207659_10219249
375 Ga0207664_10005985
376 Ga0207644_10100222
377 Ga0207690_10008503
378 Ga0207691_10013471
379 Ga0207691_10092472
380 Ga0207711_10128320
381 Ga0207661_10006678
382 Ga0207679_10001441
383 Ga0207667_10003753
384 Ga0207668_10034809
385 Ga0207668_10055203
386 Ga0207668_10192342
387 Ga0207640_10021895
388 Ga0207658_10020997
389 Ga0207658_10039345
390 Ga0207703_10192660
391 Ga0207639_10121700
392 Ga0207678_10058638
393 Ga0207702_10008048
394 Ga0207641_10135779
395 Ga0207676_10147594
396 Ga0207674_10000118
397 Ga0207675_100354943
398 Ga0207698_10004060
399 Ga0268266_10070739
400 Ga0268266_10089106
401 Ga0268266_10200325
402 Ga0268265_10093665
403 Ga0268264_10060428
404 Ga0307412_10000290
405 Ga0307412_10000460
406 Ga0307416_100151194
407 Ga0373951_0031499
408 Ga0373931_0016429
409 Ga0373931_0023810
410 Ga0373925_0293419
411 Ga0395905_0005728
412 Ga0395905_0034521
413 Ga0439433_0007774
414 Ga0450911_001085
415 Ga0450898_007084
416 Ga0439446_0006432
417 Ga0453683_0019560
418 Ga0466965_0151018
419 Ga0466970_0037069
420 Ga0451576_0003667
421 Ga0466967_0242660
422 Ga0495638_0018189
423 Ga0495638_0045728
424 Ga0495638_0051622
425 Ga0495583_0001067
426 Ga0495610_0013049
427 Ga0495616_0000974
428 Ga0495616_0022292
429 Ga0495620_0019594
430 Ga0495631_0000031
431 Ga0495637_0009838
432 Ga0495643_0000259
433 Ga0495648_0152531
434 Ga0495587_0092952
435 Ga0495598_0069142
436 Ga0495609_0000244
437 Ga0495621_0001901
438 Ga0495621_0012230
439 Ga0495621_0030033
440 Ga0495656_0010682
441 Ga0495656_0176571
442 Ga0495625_0013887
443 Ga0495661_0058047
444 Ga0495670_0013272
445 Ga0495671_0003940
446 Ga0495626_0001196
447 Ga0495626_0021515
448 Ga0496100_0005383
449 Ga0496101_0004707
450 Ga0496102_0064110
451 Ga0496104_0008049
452 Ga0496105_0016191
453 Ga0496105_0070711
454 Ga0496106_0115500
455 Ga0496107_0041859
456 Ga0496107_0092523
457 Ga0496108_0457068
458 Ga0496109_0086232
459 Ga0496109_0124157
460 Ga0496110_0032080
461 Ga0496110_0034037
462 Ga0496110_0524093
463 Ga0496111_0214184
464 Ga0496112_0190528
465 Ga0496112_0279056
466 Ga0496113_0085229
467 Ga0496114_0004071
468 Ga0496114_0094582
469 Ga0496116_0000485
470 Ga0496117_0005360
471 Ga0496117_0072046
472 Ga0496118_0005976
473 Ga0496118_0013998
474 Ga0496119_0007489
475 Ga0496119_0121783
476 Ga0496120_0012350
477 Ga0496121_0000164
478 Ga0496121_0012566
479 Ga0496121_0025586
480 Ga0496121_0035158
481 Ga0496122_0000102
482 Ga0496122_0007960
483 Ga0496122_0061322
484 Ga0496123_0000742
485 Ga0496123_0003111
486 Ga0496123_0048777
487 Ga0496124_0000004
488 Ga0496124_0000007
489 Ga0496125_0000190
490 Ga0496125_0000414
491 Ga0496125_0010227
492 Ga0496125_0014375
493 Ga0496125_0088517
494 Ga0496126_0004648
495 Ga0496126_0009262
496 Ga0496126_0095096
497 Ga0501033_0006641
498 Ga0501034_0111826
499 Ga0501037_0226392
500 Ga0501047_0117558
501 Ga0501035_0069644
502 Ga0501044_0050993
503 nmdc:mga0k408_5063_c1
504 nmdc:mga0qj67_83_c1
505 nmdc:mga06r32_551033_c1
506 nmdc:mga08x19_25221_c1
507 Ga0500610_0000920
508 Ga0500651_0011698
509 Ga0500554_026412
510 Ga0500594_0000057
511 Ga0500595_000950
512 Ga0500595_005717
513 2599905367
514 2643858870
515 2643981207
516 2643981965
517 2644029191
518 2644120734
519 2644122734
520 2809034068
521 2809035056
522 2831868309
523 2855734117
524 2855769707
525 2857543823
526 2857546130
527 2881414046
528 2894777071
529 2929205890
530 2941480553
531 8048748191
532 8055912365

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

87

361

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qpq-assembly3.cif.gz_C structure of bug27 from bordetella pertussis 0.9614 24 317
2qpq-assembly2.cif.gz_B structure of bug27 from bordetella pertussis 0.9572 23 317
7ndr-assembly1.cif.gz_E crystal structure of tphc in an open conformation 0.9559 25 316
8hk9-assembly2.cif.gz_A apo-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis 0.953 26 316
7ndr-assembly1.cif.gz_E crystal structure of tphc in an open conformation 0.9528 25 316
ID Description Score Start End Superfamily
6hkeC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9521 122 244 3.40.190.10
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.946 23 317 3.40.190.150
4x9tA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9428 122 239 3.40.190.10
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9414 23 319 3.40.190.150
2f5xC01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9407 23 317 3.40.190.150
ID Description Score Start End GO Terms
AF-A0A1F4DK31-F1-model_v4 LacI family transcriptional regulator 0.9842 23 319
AF-A0A375FQQ0-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9823 60 317
AF-A0A2N4SUF0-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9818 31 319
AF-A0A4V2HUY2-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9798 86 317
AF-A0A1Q3XNW8-F1-model_v4 deleted 0.9772 23 317

Map