F374130

General Info

Members Datasets Scaffolds Average Seq Length
266 171 532 128

Family's Representative Sequence

Representative Sequence 3300025939|Ga0207665_10069817|Ga0207665_100698172
Length 145
Sequence VTVEPVRTPSAPPVAGPYSPAVRAGDFVALAGQVGIGADGKLVAGGIEAETEQVLANIRAVLADCGGSWGDVARATIFLTDLGNFATVNALYEGAIGAHRPARTTVGVAGLPAGAQVEIECWAYLPEETTWRKRKSPHASRAQHS

Samples

Sample ID Description Type Environment
1 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
54 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
95 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
98 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
99 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
103 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
104 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
105 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
106 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
111 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
112 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
113 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
114 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
115 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
116 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
117 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
121 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
122 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
123 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
124 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
125 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
126 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
127 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
128 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
129 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
130 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
131 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
132 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
133 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
134 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
135 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
141 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
142 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
143 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
144 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
145 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
146 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
147 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
157 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
160 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
165 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
166 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
167 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
168 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
169 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
170 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
171 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.13
Nodule 0
Rhizoplane 9.4
Rhizosphere 89.1
Stem 0
Stem Tuber 0
Unclassified 6.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207665_10069817 3300025939 Bacteria 2396
2 Ga0065707_10132283 3300005295 Bacteria 1899
3 Ga0070683_101407471 3300005329 Bacteria 670
4 Ga0070683_101676480 3300005329 Bacteria 611
5 Ga0070670_101716172 3300005331 Bacteria 578
6 Ga0070692_10168285 3300005345 Bacteria 1261
7 Ga0070668_100356991 3300005347 Bacteria 1238
8 Ga0070669_100727991 3300005353 Bacteria 839
9 Ga0070671_100530575 3300005355 Bacteria 1014
10 Ga0070671_101688708 3300005355 Bacteria 562
11 Ga0070659_100570464 3300005366 Bacteria 970
12 Ga0070667_100737025 3300005367 Bacteria 913
13 Ga0070703_10303440 3300005406 Bacteria 666
14 Ga0070709_10158365 3300005434 Bacteria 1572
15 Ga0070709_10200740 3300005434 Bacteria 1412
16 Ga0070709_10256730 3300005434 Unclassified 1261
17 Ga0070714_100041578 3300005435 Bacteria 3880
18 Ga0070713_101253319 3300005436 Bacteria 718
19 Ga0070701_10234677 3300005438 Bacteria 1100
20 Ga0070711_100106273 3300005439 Bacteria 2052
21 Ga0070700_101346292 3300005441 Bacteria 602
22 Ga0070694_100099591 3300005444 Bacteria 2054
23 Ga0070708_100023435 3300005445 Bacteria 5249
24 Ga0070708_101181545 3300005445 Bacteria 716
25 Ga0070663_101049968 3300005455 Bacteria 710
26 Ga0070678_100037100 3300005456 Bacteria 3419
27 Ga0070678_100307032 3300005456 Bacteria 1350
28 Ga0070706_101582336 3300005467 Bacteria 598
29 Ga0070707_100062223 3300005468 Bacteria 3580
30 Ga0070707_100079593 3300005468 Bacteria 3163
31 Ga0070707_100452266 3300005468 Bacteria 1245
32 Ga0070707_100714002 3300005468 Bacteria 965
33 Ga0070698_100000021 3300005471 Bacteria 106028
34 Ga0070698_100005612 3300005471 Bacteria 13719
35 Ga0070698_100015350 3300005471 Bacteria 8095
36 Ga0070698_100067579 3300005471 Bacteria 3593
37 Ga0070698_100106811 3300005471 Bacteria 2767
38 Ga0070698_100796916 3300005471 Bacteria 889
39 Ga0070699_100000897 3300005518 Bacteria 27796
40 Ga0070699_100002345 3300005518 Bacteria 17004
41 Ga0070699_100628368 3300005518 Bacteria 980
42 Ga0070699_101399061 3300005518 Bacteria 642
43 Ga0070697_100596487 3300005536 Bacteria 971
44 Ga0068853_101369461 3300005539 Bacteria 684
45 Ga0070672_101856322 3300005543 Bacteria 542
46 Ga0070686_101572051 3300005544 Bacteria 556
47 Ga0070695_100490673 3300005545 Bacteria 948
48 Ga0070696_100028528 3300005546 Bacteria 3809
49 Ga0070696_100184680 3300005546 Bacteria 1549
50 Ga0070693_100015447 3300005547 Bacteria 3931
51 Ga0070693_100244683 3300005547 Bacteria 1186
52 Ga0070665_100636065 3300005548 Bacteria 1080
53 Ga0070704_100071327 3300005549 Bacteria 2524
54 Ga0070704_102106908 3300005549 Bacteria 524
55 Ga0068859_100013749 3300005617 Bacteria 8115
56 Ga0068859_100042349 3300005617 Bacteria 4573
57 Ga0068859_100994993 3300005617 Bacteria 921
58 Ga0068866_10419087 3300005718 Bacteria 868
59 Ga0068863_100820348 3300005841 Bacteria 928
60 Ga0068863_102453885 3300005841 Bacteria 531
61 Ga0068858_100619189 3300005842 Bacteria 1051
62 Ga0068862_100055687 3300005844 Bacteria 3387
63 Ga0068862_102025393 3300005844 Bacteria 586
64 Ga0070717_10597559 3300006028 Unclassified 1001
65 Ga0075364_10399991 3300006051 Bacteria 937
66 Ga0075364_10421589 3300006051 Bacteria 911
67 Ga0070716_100162052 3300006173 Bacteria 1450
68 Ga0070712_100045799 3300006175 Bacteria 3022
69 Ga0075427_10073065 3300006194 Bacteria 613
70 Ga0075428_100194983 3300006844 Bacteria 2190
71 Ga0075428_100215040 3300006844 Bacteria 2077
72 Ga0075428_101465570 3300006844 Bacteria 715
73 Ga0075428_102130338 3300006844 Unclassified 579
74 Ga0075430_100061006 3300006846 Bacteria 3170
75 Ga0075430_100671851 3300006846 Bacteria 854
76 Ga0075430_100795766 3300006846 Bacteria 779
77 Ga0075431_100047916 3300006847 Bacteria 4407
78 Ga0075434_100276416 3300006871 Bacteria 1699
79 Ga0075429_100005268 3300006880 Bacteria 11125
80 Ga0075429_100194611 3300006880 Bacteria 1776
81 Ga0068865_102166380 3300006881 Bacteria 506
82 Ga0075436_100827783 3300006914 Bacteria 690
83 Ga0097620_100013749 3300006931 Bacteria 8115
84 Ga0097620_100042351 3300006931 Bacteria 4573
85 Ga0097620_100995021 3300006931 Bacteria 921
86 Ga0075435_100377733 3300007076 Bacteria 1217
87 Ga0099794_10101649 3300007265 Bacteria 1435
88 Ga0111539_10573837 3300009094 Bacteria 1314
89 Ga0111539_10589478 3300009094 Bacteria 1295
90 Ga0114129_10051033 3300009147 Bacteria 5808
91 Ga0114129_10086583 3300009147 Bacteria 4345
92 Ga0114129_10190364 3300009147 Bacteria 2786
93 Ga0114129_10402195 3300009147 Bacteria 1804
94 Ga0114129_10646737 3300009147 Bacteria 1365
95 Ga0105248_10512144 3300009177 Bacteria 1353
96 Ga0105249_10274838 3300009553 Bacteria 1680
97 Ga0105249_10912177 3300009553 Bacteria 946
98 Ga0105239_11798013 3300010375 Bacteria 710
99 Ga0105246_10373229 3300011119 Bacteria 1176
100 Ga0163162_11818072 3300013306 Bacteria 697
101 Ga0163163_10559217 3300014325 Bacteria 1207
102 Ga0163163_10816409 3300014325 Bacteria 996
103 Ga0163163_11256623 3300014325 Unclassified 803
104 Ga0163163_11376867 3300014325 Bacteria 767
105 Ga0157380_12435515 3300014326 Bacteria 589
106 Ga0157379_10716307 3300014968 Unclassified 940
107 Ga0207692_10328207 3300025898 Bacteria 938
108 Ga0207688_11040619 3300025901 Bacteria 517
109 Ga0207699_10058835 3300025906 Bacteria 2301
110 Ga0207684_10791924 3300025910 Bacteria 802
111 Ga0207693_10086589 3300025915 Bacteria 2455
112 Ga0207663_10158725 3300025916 Bacteria 1594
113 Ga0207646_10046351 3300025922 Bacteria 3900
114 Ga0207646_10058949 3300025922 Bacteria 3428
115 Ga0207646_10662183 3300025922 Bacteria 935
116 Ga0207646_11424125 3300025922 Bacteria 602
117 Ga0207681_10671807 3300025923 Bacteria 860
118 Ga0207694_11438049 3300025924 Bacteria 582
119 Ga0207687_10359881 3300025927 Bacteria 1187
120 Ga0207687_11283691 3300025927 Bacteria 629
121 Ga0207700_11472637 3300025928 Bacteria 604
122 Ga0207664_10278674 3300025929 Unclassified 1467
123 Ga0207644_10484434 3300025931 Bacteria 1019
124 Ga0207690_10629068 3300025932 Bacteria 878
125 Ga0207691_10788011 3300025940 Bacteria 799
126 Ga0207711_11227242 3300025941 Bacteria 691
127 Ga0207661_10279901 3300025944 Bacteria 1491
128 Ga0207661_11924626 3300025944 Bacteria 537
129 Ga0207712_10227386 3300025961 Bacteria 1495
130 Ga0207712_10576798 3300025961 Bacteria 970
131 Ga0207668_10406957 3300025972 Bacteria 1152
132 Ga0207658_11286083 3300025986 Bacteria 669
133 Ga0207677_10153786 3300026023 Bacteria 1778
134 Ga0207677_10831132 3300026023 Bacteria 829
135 Ga0207641_10236837 3300026088 Bacteria 1699
136 Ga0207676_10216210 3300026095 Bacteria 1704
137 Ga0207683_10609742 3300026121 Bacteria 1010
138 Ga0209999_1029363 3300027543 Bacteria 1020
139 Ga0207428_10183976 3300027907 Bacteria 1577
140 Ga0268266_10741881 3300028379 Bacteria 947
141 Ga0268265_10573459 3300028380 Bacteria 1074
142 Ga0268265_11573954 3300028380 Bacteria 662
143 Ga0268264_10770110 3300028381 Bacteria 960
144 Ga0265320_10122544 3300031240 Bacteria 1185
145 Ga0265327_10119316 3300031251 Bacteria 1252
146 Ga0307409_100772245 3300031995 Bacteria 966
147 Ga0373962_0100820 3300035242 Unclassified 900
148 Ga0373931_0390753 3300035691 Unclassified 879
149 Ga0373931_0506153 3300035691 Bacteria 780
150 Ga0373933_0735333 3300035724 Bacteria 649
151 Ga0373937_1535243 3300036401 Bacteria 613
152 Ga0373925_0495414 3300037068 Bacteria 1003
153 Ga0373925_1718152 3300037068 Unclassified 512
154 Ga0395905_0440198 3300037471 Bacteria 1201
155 Ga0436365_1398867 3300039437 Unclassified 945
156 Ga0453683_1005784 3300044673 Bacteria 554
157 Ga0453684_0394338 3300044712 Bacteria 1552
158 Ga0451576_1394523 3300045051 Bacteria 729
159 Ga0466967_0293092 3300045976 Bacteria 1564
160 Ga0495603_0307955 3300046455 Bacteria 910
161 Ga0495629_0792869 3300046459 Unclassified 625
162 Ga0495651_0302639 3300046462 Bacteria 1072
163 Ga0495653_0017191 3300046463 Bacteria 5881
164 Ga0495653_0469054 3300046463 Bacteria 789
165 Ga0495582_0203008 3300046473 Bacteria 1132
166 Ga0495662_0131132 3300046476 Bacteria 1232
167 Ga0495664_0394164 3300046477 Bacteria 832
168 Ga0495594_0096091 3300046499 Bacteria 1664
169 Ga0495608_0133422 3300046511 Bacteria 1588
170 Ga0495618_0097796 3300046514 Bacteria 1878
171 Ga0495628_0008722 3300046516 Bacteria 8673
172 Ga0495628_0168048 3300046516 Bacteria 1664
173 Ga0495628_1174561 3300046516 Unclassified 522
174 Ga0495630_0068674 3300046517 Bacteria 2665
175 Ga0495630_0236249 3300046517 Bacteria 1397
176 Ga0495630_0281656 3300046517 Bacteria 1270
177 Ga0495630_0453883 3300046517 Bacteria 982
178 Ga0495630_0532289 3300046517 Bacteria 901
179 Ga0495666_0022881 3300046526 Bacteria 3093
180 Ga0495587_0704660 3300046536 Unclassified 553
181 Ga0495645_0851624 3300046543 Bacteria 544
182 Ga0495634_0454324 3300046642 Bacteria 755
183 Ga0495657_0143615 3300046675 Bacteria 1486
184 Ga0495657_0517119 3300046675 Unclassified 695
185 Ga0495657_0632494 3300046675 Bacteria 618
186 Ga0495599_0277396 3300046678 Bacteria 1016
187 Ga0495623_0517832 3300046679 Unclassified 628
188 Ga0495658_0082171 3300046683 Bacteria 1893
189 Ga0495613_0237519 3300046689 Bacteria 1275
190 Ga0495600_0266573 3300046809 Bacteria 1087
191 Ga0495674_0134946 3300047319 Bacteria 2077
192 Ga0495674_1055475 3300047319 Bacteria 620
193 Ga0495674_1215718 3300047319 Unclassified 569
194 Ga0495676_0560448 3300047321 Bacteria 746
195 Ga0495680_0183495 3300047322 Bacteria 1509
196 Ga0495680_0212575 3300047322 Bacteria 1384
197 Ga0495675_0138775 3300047444 Bacteria 1508
198 Ga0495684_0015478 3300047471 Bacteria 5869
199 Ga0495684_0408033 3300047471 Bacteria 952
200 Ga0495602_0481047 3300048088 Bacteria 871
201 Ga0496100_0059498 3300048903 Bacteria 2511
202 Ga0496100_0887128 3300048903 Bacteria 700
203 Ga0496100_1017939 3300048903 Bacteria 652
204 Ga0496101_0465386 3300048904 Bacteria 998
205 Ga0496102_0092778 3300048905 Bacteria 2797
206 Ga0496102_0369911 3300048905 Bacteria 1349
207 Ga0496102_0472734 3300048905 Bacteria 1175
208 Ga0496102_1584595 3300048905 Bacteria 573
209 Ga0496104_0012855 3300048907 Bacteria 7540
210 Ga0496104_0039854 3300048907 Bacteria 4400
211 Ga0496105_0008812 3300048908 Bacteria 7856
212 Ga0496105_0049645 3300048908 Bacteria 3465
213 Ga0496105_0171790 3300048908 Bacteria 1777
214 Ga0496105_1022694 3300048908 Bacteria 617
215 Ga0496107_0287267 3300048910 Bacteria 1224
216 Ga0496108_0183923 3300048911 Bacteria 1810
217 Ga0496108_0629466 3300048911 Bacteria 934
218 Ga0496109_0125792 3300048912 Bacteria 2390
219 Ga0496110_0136880 3300048913 Bacteria 2214
220 Ga0496110_0487318 3300048913 Bacteria 1123
221 Ga0496110_0813208 3300048913 Bacteria 839
222 Ga0496113_0274883 3300048916 Bacteria 1347
223 Ga0496114_0054763 3300048917 Bacteria 3326
224 Ga0496114_0606531 3300048917 Bacteria 965
225 Ga0496115_0010475 3300048918 Bacteria 6928
226 Ga0501036_0078174 3300049572 Bacteria 2799
227 Ga0501038_0391618 3300049574 Bacteria 1076
228 Ga0501040_0400261 3300049576 Bacteria 986
229 Ga0501043_0021779 3300049579 Bacteria 5026
230 Ga0501046_0194152 3300049580 Bacteria 1513
231 Ga0501047_0127378 3300049581 Bacteria 2426
232 Ga0501068_0093771 3300049584 Bacteria 1855
233 Ga0501068_0345900 3300049584 Bacteria 955
234 Ga0501070_0031130 3300049586 Bacteria 4469
235 Ga0501073_0054955 3300049589 Bacteria 2787
236 Ga0501073_0883313 3300049589 Bacteria 616
237 Ga0501077_0097323 3300049593 Bacteria 1865
238 Ga0501080_0350684 3300049742 Bacteria 1333
239 Ga0501080_0563081 3300049742 Bacteria 1014
240 Ga0501083_0556867 3300049744 Bacteria 746
241 nmdc:mga00v17_416438_c1 3300050491 Bacteria 873
242 nmdc:mga05p37_1279919_c1 3300050507 Bacteria 750
243 nmdc:mga05p37_19135_c1 3300050507 Bacteria 8283
244 nmdc:mga05p37_279797_c1 3300050507 Bacteria 1990
245 nmdc:mga05p37_67283_c1 3300050507 Bacteria 2786
246 nmdc:mga05p37_845787_c1 3300050507 Bacteria 994
247 nmdc:mga06r32_42627_c1 3300050510 Bacteria 4316
248 nmdc:mga06r32_667865_c1 3300050510 Bacteria 1006
249 nmdc:mga08y16_120192_c1 3300050511 Bacteria 2734
250 nmdc:mga08y16_1515888_c1 3300050511 Bacteria 630
251 nmdc:mga0n895_361944_c1 3300050512 Bacteria 1469
252 nmdc:mga0rr50_176_c2 3300050513 Bacteria 16946
253 nmdc:mga0rr50_391928_c1 3300050513 Bacteria 1172
254 nmdc:mga08x19_449328_c1 3300050514 Bacteria 907
255 Ga0495601_0099394 3300053077 Bacteria 1878
256 Ga0495601_0283167 3300053077 Bacteria 1081
257 Ga0495595_0060954 3300053084 Bacteria 1766
258 Ga0495595_0257452 3300053084 Bacteria 874
259 Ga0495619_0024098 3300053085 Bacteria 3902
260 Ga0495619_0054586 3300053085 Bacteria 2645
261 Ga0495619_0125803 3300053085 Bacteria 1759
262 Ga0495619_0187362 3300053085 Bacteria 1432
263 Ga0495619_0256794 3300053085 Bacteria 1211
264 Ga0501084_0534155 3300054114 Bacteria 991
265 Ga0501082_0143314 3300060353 Bacteria 2074
266 Ga0501082_1249092 3300060353 Bacteria 649
267 Ga0207665_10069817
268 Ga0065707_10132283
269 Ga0070683_101407471
270 Ga0070683_101676480
271 Ga0070670_101716172
272 Ga0070692_10168285
273 Ga0070668_100356991
274 Ga0070669_100727991
275 Ga0070671_100530575
276 Ga0070671_101688708
277 Ga0070659_100570464
278 Ga0070667_100737025
279 Ga0070703_10303440
280 Ga0070709_10158365
281 Ga0070709_10200740
282 Ga0070709_10256730
283 Ga0070714_100041578
284 Ga0070713_101253319
285 Ga0070701_10234677
286 Ga0070711_100106273
287 Ga0070700_101346292
288 Ga0070694_100099591
289 Ga0070708_100023435
290 Ga0070708_101181545
291 Ga0070663_101049968
292 Ga0070678_100037100
293 Ga0070678_100307032
294 Ga0070706_101582336
295 Ga0070707_100062223
296 Ga0070707_100079593
297 Ga0070707_100452266
298 Ga0070707_100714002
299 Ga0070698_100000021
300 Ga0070698_100005612
301 Ga0070698_100015350
302 Ga0070698_100067579
303 Ga0070698_100106811
304 Ga0070698_100796916
305 Ga0070699_100000897
306 Ga0070699_100002345
307 Ga0070699_100628368
308 Ga0070699_101399061
309 Ga0070697_100596487
310 Ga0068853_101369461
311 Ga0070672_101856322
312 Ga0070686_101572051
313 Ga0070695_100490673
314 Ga0070696_100028528
315 Ga0070696_100184680
316 Ga0070693_100015447
317 Ga0070693_100244683
318 Ga0070665_100636065
319 Ga0070704_100071327
320 Ga0070704_102106908
321 Ga0068859_100013749
322 Ga0068859_100042349
323 Ga0068859_100994993
324 Ga0068866_10419087
325 Ga0068863_100820348
326 Ga0068863_102453885
327 Ga0068858_100619189
328 Ga0068862_100055687
329 Ga0068862_102025393
330 Ga0070717_10597559
331 Ga0075364_10399991
332 Ga0075364_10421589
333 Ga0070716_100162052
334 Ga0070712_100045799
335 Ga0075427_10073065
336 Ga0075428_100194983
337 Ga0075428_100215040
338 Ga0075428_101465570
339 Ga0075428_102130338
340 Ga0075430_100061006
341 Ga0075430_100671851
342 Ga0075430_100795766
343 Ga0075431_100047916
344 Ga0075434_100276416
345 Ga0075429_100005268
346 Ga0075429_100194611
347 Ga0068865_102166380
348 Ga0075436_100827783
349 Ga0097620_100013749
350 Ga0097620_100042351
351 Ga0097620_100995021
352 Ga0075435_100377733
353 Ga0099794_10101649
354 Ga0111539_10573837
355 Ga0111539_10589478
356 Ga0114129_10051033
357 Ga0114129_10086583
358 Ga0114129_10190364
359 Ga0114129_10402195
360 Ga0114129_10646737
361 Ga0105248_10512144
362 Ga0105249_10274838
363 Ga0105249_10912177
364 Ga0105239_11798013
365 Ga0105246_10373229
366 Ga0163162_11818072
367 Ga0163163_10559217
368 Ga0163163_10816409
369 Ga0163163_11256623
370 Ga0163163_11376867
371 Ga0157380_12435515
372 Ga0157379_10716307
373 Ga0207692_10328207
374 Ga0207688_11040619
375 Ga0207699_10058835
376 Ga0207684_10791924
377 Ga0207693_10086589
378 Ga0207663_10158725
379 Ga0207646_10046351
380 Ga0207646_10058949
381 Ga0207646_10662183
382 Ga0207646_11424125
383 Ga0207681_10671807
384 Ga0207694_11438049
385 Ga0207687_10359881
386 Ga0207687_11283691
387 Ga0207700_11472637
388 Ga0207664_10278674
389 Ga0207644_10484434
390 Ga0207690_10629068
391 Ga0207691_10788011
392 Ga0207711_11227242
393 Ga0207661_10279901
394 Ga0207661_11924626
395 Ga0207712_10227386
396 Ga0207712_10576798
397 Ga0207668_10406957
398 Ga0207658_11286083
399 Ga0207677_10153786
400 Ga0207677_10831132
401 Ga0207641_10236837
402 Ga0207676_10216210
403 Ga0207683_10609742
404 Ga0209999_1029363
405 Ga0207428_10183976
406 Ga0268266_10741881
407 Ga0268265_10573459
408 Ga0268265_11573954
409 Ga0268264_10770110
410 Ga0265320_10122544
411 Ga0265327_10119316
412 Ga0307409_100772245
413 Ga0373962_0100820
414 Ga0373931_0390753
415 Ga0373931_0506153
416 Ga0373933_0735333
417 Ga0373937_1535243
418 Ga0373925_0495414
419 Ga0373925_1718152
420 Ga0395905_0440198
421 Ga0436365_1398867
422 Ga0453683_1005784
423 Ga0453684_0394338
424 Ga0451576_1394523
425 Ga0466967_0293092
426 Ga0495603_0307955
427 Ga0495629_0792869
428 Ga0495651_0302639
429 Ga0495653_0017191
430 Ga0495653_0469054
431 Ga0495582_0203008
432 Ga0495662_0131132
433 Ga0495664_0394164
434 Ga0495594_0096091
435 Ga0495608_0133422
436 Ga0495618_0097796
437 Ga0495628_0008722
438 Ga0495628_0168048
439 Ga0495628_1174561
440 Ga0495630_0068674
441 Ga0495630_0236249
442 Ga0495630_0281656
443 Ga0495630_0453883
444 Ga0495630_0532289
445 Ga0495666_0022881
446 Ga0495587_0704660
447 Ga0495645_0851624
448 Ga0495634_0454324
449 Ga0495657_0143615
450 Ga0495657_0517119
451 Ga0495657_0632494
452 Ga0495599_0277396
453 Ga0495623_0517832
454 Ga0495658_0082171
455 Ga0495613_0237519
456 Ga0495600_0266573
457 Ga0495674_0134946
458 Ga0495674_1055475
459 Ga0495674_1215718
460 Ga0495676_0560448
461 Ga0495680_0183495
462 Ga0495680_0212575
463 Ga0495675_0138775
464 Ga0495684_0015478
465 Ga0495684_0408033
466 Ga0495602_0481047
467 Ga0496100_0059498
468 Ga0496100_0887128
469 Ga0496100_1017939
470 Ga0496101_0465386
471 Ga0496102_0092778
472 Ga0496102_0369911
473 Ga0496102_0472734
474 Ga0496102_1584595
475 Ga0496104_0012855
476 Ga0496104_0039854
477 Ga0496105_0008812
478 Ga0496105_0049645
479 Ga0496105_0171790
480 Ga0496105_1022694
481 Ga0496107_0287267
482 Ga0496108_0183923
483 Ga0496108_0629466
484 Ga0496109_0125792
485 Ga0496110_0136880
486 Ga0496110_0487318
487 Ga0496110_0813208
488 Ga0496113_0274883
489 Ga0496114_0054763
490 Ga0496114_0606531
491 Ga0496115_0010475
492 Ga0501036_0078174
493 Ga0501038_0391618
494 Ga0501040_0400261
495 Ga0501043_0021779
496 Ga0501046_0194152
497 Ga0501047_0127378
498 Ga0501068_0093771
499 Ga0501068_0345900
500 Ga0501070_0031130
501 Ga0501073_0054955
502 Ga0501073_0883313
503 Ga0501077_0097323
504 Ga0501080_0350684
505 Ga0501080_0563081
506 Ga0501083_0556867
507 nmdc:mga00v17_416438_c1
508 nmdc:mga05p37_1279919_c1
509 nmdc:mga05p37_19135_c1
510 nmdc:mga05p37_279797_c1
511 nmdc:mga05p37_67283_c1
512 nmdc:mga05p37_845787_c1
513 nmdc:mga06r32_42627_c1
514 nmdc:mga06r32_667865_c1
515 nmdc:mga08y16_120192_c1
516 nmdc:mga08y16_1515888_c1
517 nmdc:mga0n895_361944_c1
518 nmdc:mga0rr50_176_c2
519 nmdc:mga0rr50_391928_c1
520 nmdc:mga08x19_449328_c1
521 Ga0495601_0099394
522 Ga0495601_0283167
523 Ga0495595_0060954
524 Ga0495595_0257452
525 Ga0495619_0024098
526 Ga0495619_0054586
527 Ga0495619_0125803
528 Ga0495619_0187362
529 Ga0495619_0256794
530 Ga0501084_0534155
531 Ga0501082_0143314
532 Ga0501082_1249092

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01042

Ribonuc_L-PSP

Endoribonuclease L-PSP

8

125

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3l7q-assembly2.cif.gz_E crystal structure of aldr from streptococcus mutans 0.9881 4 127
3mqw-assembly2.cif.gz_F crystal structure of a putative endoribonuclease l-psp from entamoeba histolytica with higher solvent content and an ordered n-terminal tag 0.9858 1 125
5yu2-assembly1.cif.gz_B structure of ribonuclease yabj 0.9856 4 127
3m1x-assembly1.cif.gz_A crystal structure of a putative endoribonuclease l-psp from entamoeba histolytica, rhomobohedral form 0.9847 1 125
3quw-assembly1.cif.gz_A crystal structure of yeast mmf1 0.9828 2 127
ID Description Score Start End Superfamily
3m1xA00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.9847 1 125 3.30.1330.40
3mqwD00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.9845 1 125 3.30.1330.40
1jd1F00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.9823 2 127 3.30.1330.40
af_Q86KR5_2_129_3.30.1330.40 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.9798 1 127 3.30.1330.40
5hp8A00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.9795 19 125 3.30.1330.40
ID Description Score Start End GO Terms
AF-A0A4P5VUU6-F1-model_v4 Reactive intermediate/imine deaminase 0.998 4 129 GO:0005829
GO:0019239
AF-A0A1H9TFP0-F1-model_v4 Endoribonuclease L-PSP 0.997 4 127 GO:0005829
GO:0019239
AF-A0A1D1ZAS0-F1-model_v4 RutC family protein PYRAB12510 0.9961 2 129 GO:0005739
GO:0005829
GO:0019239
AF-A0A1B1NJP4-F1-model_v4 deleted 0.9958 4 125
AF-A0A7V5KH78-F1-model_v4 RidA family protein 0.9951 3 128 GO:0005829
GO:0019239

Map