F373999

General Info

Members Datasets Scaffolds Average Seq Length
266 156 532 622

Family's Representative Sequence

Representative Sequence 3300006852|Ga0075433_10002996|Ga0075433_100029969
Length 714
Sequence MISSCADGLLIPGGSRVEGEWYHTRWGARGTRGMTLPAFVDGGIDRLHSTHMSSSSFEPGDGVVRRVRPAAESRDVLAEKAGAVADHAADAVLALQKPDGYWCGDLLGDSTLESDYVVLQLWLHPPDDGPWRPPSWDRILRAREAILGQQGPDGGFPIYPGGPGEINATVKAYAALKLAGLSPDAEPMRRARDAVLRLGGIQETNSYVRINLSLFGLYPRRYVPTIPPELVLLPGGIIYEMSSWTRAIVVPLSVVQARAGRRPVPAGFTLDELAVPGKSFRFPRRDRLSAVFTQIDAALKVWEHRAPDVIRRSALREAEKWMFDRTRHSDGLGAIFPAMMYFIMALECLGYPRDHPDVVEAIRVYEELMTDTGERLYFQPCFSPVWDTAIAMFALGEQGRDATDAQRRAADWLIGKEIRKRPETEPSGWAFEYNNEHYPDIDDTAMVLLALQHAKASDPAAQDRCERRALTWLTQMQSSDGGWAAFDVDNNWALLNRVPFADHNAMLDPTCPDITGRVLEALCRRGLRITDQPVDRGASYLLQTQEEDGSWYGRWGVNYVYGTFLALRGLRAAHDRTASRAMFQAGRWLASVQNVDGGWGEGCESYSEGHFVPAPSTPSQTAWGLLGLIAAGQGDGEGLIRGVRYLIDTQKADGTWDESLATGTGFPGVFYLRYTLYRNYFPLLALAHARRTLEASARSLRLVREGGAHAHDAD

Samples

Sample ID Description Type Environment
1 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
95 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
96 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
97 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
98 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
99 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
100 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
101 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
102 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
103 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
104 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
105 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
111 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
112 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
113 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
114 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
115 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
116 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
117 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
121 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
122 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
123 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
124 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
125 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
126 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
127 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
128 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
132 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
140 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
143 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
144 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
145 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
146 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
153 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 2856287931 Paraburkholderia bannensis BE22 Isolate Rhizosphere
156 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0
Isolates 0.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.38
Rhizosphere 94.74
Stem 0
Stem Tuber 0
Unclassified 4.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075433_10002996 3300006852 Bacteria 12975
2 Ga0070683_100004024 3300005329 Bacteria 12031
3 Ga0070683_100067313 3300005329 Bacteria 3336
4 Ga0070666_10016803 3300005335 Bacteria 4686
5 Ga0070666_10073359 3300005335 Bacteria 2331
6 Ga0070680_100003693 3300005336 Bacteria 11430
7 Ga0068868_100010342 3300005338 Bacteria 6748
8 Ga0070660_100001736 3300005339 Bacteria 14950
9 Ga0070660_100049300 3300005339 Bacteria 3237
10 Ga0070660_100074308 3300005339 Bacteria 2660
11 Ga0070691_10000928 3300005341 Bacteria 11892
12 Ga0070661_100062709 3300005344 Bacteria 2729
13 Ga0070659_100041751 3300005366 Unclassified 3586
14 Ga0070667_100072716 3300005367 Bacteria 2931
15 Ga0070714_100002697 3300005435 Bacteria 13080
16 Ga0070713_100000494 3300005436 Bacteria 25196
17 Ga0070711_100002930 3300005439 Bacteria 9835
18 Ga0070694_100015861 3300005444 Bacteria 4740
19 Ga0070662_100036526 3300005457 Bacteria 3476
20 Ga0070681_10007133 3300005458 Bacteria 10888
21 Ga0070681_10014512 3300005458 Bacteria 7840
22 Ga0070681_10016012 3300005458 Bacteria 7474
23 Ga0070707_100000552 3300005468 Bacteria 37520
24 Ga0070707_100150517 3300005468 Bacteria 2266
25 Ga0070699_100082285 3300005518 Bacteria 2806
26 Ga0070679_100000611 3300005530 Bacteria 30391
27 Ga0070684_100001326 3300005535 Bacteria 17741
28 Ga0070695_100035176 3300005545 Bacteria 3145
29 Ga0070665_100025866 3300005548 Bacteria 5910
30 Ga0070665_100076372 3300005548 Bacteria 3357
31 Ga0068855_100003835 3300005563 Bacteria 18381
32 Ga0068855_100040552 3300005563 Bacteria 5526
33 Ga0068855_100042572 3300005563 Bacteria 5380
34 Ga0068857_100001630 3300005577 Bacteria 18004
35 Ga0068857_100016578 3300005577 Bacteria 6455
36 Ga0068857_100062130 3300005577 Bacteria 3320
37 Ga0068856_100006368 3300005614 Bacteria 11585
38 Ga0068856_100014642 3300005614 Bacteria 7575
39 Ga0068859_100056205 3300005617 Bacteria 3960
40 Ga0068859_100108872 3300005617 Bacteria 2832
41 Ga0068859_100112040 3300005617 Bacteria 2791
42 Ga0068858_100001223 3300005842 Bacteria 26580
43 Ga0068860_100052528 3300005843 Bacteria 3876
44 Ga0068860_100085343 3300005843 Bacteria 3004
45 Ga0068862_100046860 3300005844 Bacteria 3687
46 Ga0081455_10032614 3300005937 Bacteria 4691
47 Ga0081538_10015056 3300005981 Bacteria 6011
48 Ga0081539_10003888 3300005985 Bacteria 17434
49 Ga0070717_10014455 3300006028 Bacteria 6074
50 Ga0070717_10038329 3300006028 Bacteria 3896
51 Ga0097621_100014176 3300006237 Bacteria 5961
52 Ga0068871_100022484 3300006358 Bacteria 4862
53 Ga0068871_100061251 3300006358 Bacteria 3073
54 Ga0075431_100000073 3300006847 Bacteria 58648
55 Ga0068865_100023388 3300006881 Bacteria 4044
56 Ga0097620_100056203 3300006931 Bacteria 3960
57 Ga0097620_100108867 3300006931 Bacteria 2832
58 Ga0097620_100112038 3300006931 Bacteria 2791
59 Ga0105240_10000734 3300009093 Bacteria 59913
60 Ga0105240_10003130 3300009093 Bacteria 26057
61 Ga0105240_10008079 3300009093 Bacteria 15121
62 Ga0105240_10025184 3300009093 Bacteria 7825
63 Ga0105240_10052025 3300009093 Bacteria 5150
64 Ga0105240_10164578 3300009093 Bacteria 2631
65 Ga0105245_10002936 3300009098 Bacteria 15307
66 Ga0114129_10133751 3300009147 Bacteria 3404
67 Ga0105243_10032723 3300009148 Bacteria 4020
68 Ga0105243_10034042 3300009148 Bacteria 3942
69 Ga0105241_10005694 3300009174 Bacteria 9198
70 Ga0105242_10015672 3300009176 Bacteria 5888
71 Ga0105242_10048414 3300009176 Bacteria 3455
72 Ga0105242_10073177 3300009176 Unclassified 2848
73 Ga0105248_10058891 3300009177 Bacteria 4314
74 Ga0105248_10076108 3300009177 Bacteria 3772
75 Ga0105237_10003358 3300009545 Bacteria 19053
76 Ga0105237_10004997 3300009545 Bacteria 15107
77 Ga0105237_10050467 3300009545 Bacteria 4180
78 Ga0105237_10052812 3300009545 Bacteria 4078
79 Ga0105237_10104493 3300009545 Bacteria 2824
80 Ga0105238_10003861 3300009551 Bacteria 14883
81 Ga0105238_10015927 3300009551 Bacteria 7607
82 Ga0105238_10018907 3300009551 Bacteria 7016
83 Ga0105238_10030245 3300009551 Bacteria 5511
84 Ga0105249_10074515 3300009553 Bacteria 3142
85 Ga0105239_10002187 3300010375 Bacteria 25142
86 Ga0105239_10028882 3300010375 Bacteria 6097
87 Ga0105239_10047358 3300010375 Bacteria 4712
88 Ga0105239_10085244 3300010375 Bacteria 3481
89 Ga0105239_10088293 3300010375 Bacteria 3419
90 Ga0105239_10092958 3300010375 Bacteria 3330
91 Ga0157371_10111018 3300013102 Bacteria 1946
92 Ga0157370_10010864 3300013104 Bacteria 9562
93 Ga0157370_10017357 3300013104 Bacteria 7264
94 Ga0157370_10031888 3300013104 Bacteria 5150
95 Ga0157369_10004879 3300013105 Bacteria 15733
96 Ga0157369_10025686 3300013105 Bacteria 6536
97 Ga0157369_10034392 3300013105 Bacteria 5562
98 Ga0157369_10038983 3300013105 Bacteria 5194
99 Ga0157369_10146414 3300013105 Bacteria 2498
100 Ga0157374_10013445 3300013296 Bacteria 7143
101 Ga0157374_10015754 3300013296 Bacteria 6639
102 Ga0157374_10082427 3300013296 Unclassified 3054
103 Ga0157378_10091584 3300013297 Bacteria 2765
104 Ga0157372_10006695 3300013307 Bacteria 12260
105 Ga0157372_10044200 3300013307 Bacteria 4935
106 Ga0157372_10089612 3300013307 Bacteria 3495
107 Ga0157375_10000960 3300013308 Bacteria 24949
108 Ga0157375_10012973 3300013308 Bacteria 7402
109 Ga0163163_10017935 3300014325 Bacteria 6612
110 Ga0163163_10076513 3300014325 Bacteria 3342
111 Ga0157379_10062237 3300014968 Bacteria 3338
112 Ga0213872_10000545 3300021361 Bacteria 29288
113 Ga0213876_10014086 3300021384 Unclassified 4240
114 Ga0213875_10000029 3300021388 Bacteria 182973
115 Ga0213875_10020067 3300021388 Unclassified 3207
116 Ga0213875_10021131 3300021388 Bacteria 3121
117 Ga0207680_10003696 3300025903 Bacteria 7187
118 Ga0207654_10050446 3300025911 Unclassified 2391
119 Ga0207707_10000342 3300025912 Bacteria 49348
120 Ga0207695_10001377 3300025913 Bacteria 41152
121 Ga0207695_10002645 3300025913 Bacteria 26181
122 Ga0207695_10005068 3300025913 Bacteria 17663
123 Ga0207695_10032892 3300025913 Bacteria 5668
124 Ga0207695_10083690 3300025913 Bacteria 3223
125 Ga0207671_10003958 3300025914 Bacteria 14414
126 Ga0207671_10019876 3300025914 Bacteria 5125
127 Ga0207660_10013991 3300025917 Bacteria 5266
128 Ga0207657_10003147 3300025919 Bacteria 17648
129 Ga0207649_10048767 3300025920 Bacteria 2613
130 Ga0207652_10006289 3300025921 Bacteria 9586
131 Ga0207646_10000933 3300025922 Bacteria 37602
132 Ga0207694_10000227 3300025924 Bacteria 54475
133 Ga0207694_10002210 3300025924 Bacteria 15971
134 Ga0207694_10011269 3300025924 Bacteria 6752
135 Ga0207694_10018754 3300025924 Bacteria 5230
136 Ga0207694_10067639 3300025924 Bacteria 2789
137 Ga0207694_10072401 3300025924 Bacteria 2694
138 Ga0207687_10007824 3300025927 Bacteria 7007
139 Ga0207687_10010175 3300025927 Bacteria 6147
140 Ga0207687_10013596 3300025927 Bacteria 5313
141 Ga0207687_10086457 3300025927 Bacteria 2277
142 Ga0207664_10003316 3300025929 Bacteria 10706
143 Ga0207690_10034013 3300025932 Bacteria 3281
144 Ga0207686_10003863 3300025934 Bacteria 8034
145 Ga0207686_10079436 3300025934 Bacteria 2136
146 Ga0207670_10029238 3300025936 Bacteria 3509
147 Ga0207704_10015434 3300025938 Bacteria 3892
148 Ga0207704_10016162 3300025938 Bacteria 3827
149 Ga0207711_10004094 3300025941 Bacteria 12504
150 Ga0207711_10078284 3300025941 Bacteria 2884
151 Ga0207711_10096270 3300025941 Bacteria 2612
152 Ga0207661_10002550 3300025944 Bacteria 12537
153 Ga0207661_10088714 3300025944 Bacteria 2571
154 Ga0207667_10002537 3300025949 Bacteria 22738
155 Ga0207667_10006875 3300025949 Bacteria 13743
156 Ga0207667_10008499 3300025949 Bacteria 12189
157 Ga0207667_10034846 3300025949 Bacteria 5403
158 Ga0207658_10038973 3300025986 Bacteria 3427
159 Ga0207703_10006055 3300026035 Bacteria 9674
160 Ga0207639_10008182 3300026041 Bacteria 7155
161 Ga0207639_10010789 3300026041 Bacteria 6333
162 Ga0207702_10002752 3300026078 Bacteria 16450
163 Ga0207702_10009221 3300026078 Bacteria 8298
164 Ga0207702_10011606 3300026078 Bacteria 7341
165 Ga0207702_10026316 3300026078 Bacteria 4830
166 Ga0207702_10102284 3300026078 Bacteria 2532
167 Ga0207702_10153601 3300026078 Unclassified 2096
168 Ga0207641_10120052 3300026088 Bacteria 2344
169 Ga0207648_10020288 3300026089 Bacteria 5988
170 Ga0207674_10000771 3300026116 Bacteria 41769
171 Ga0207674_10005667 3300026116 Bacteria 14807
172 Ga0207674_10020143 3300026116 Bacteria 7214
173 Ga0207698_10002633 3300026142 Bacteria 10661
174 Ga0207428_10000367 3300027907 Bacteria 57765
175 Ga0207428_10023002 3300027907 Bacteria 5249
176 Ga0268266_10084813 3300028379 Bacteria 2767
177 Ga0268265_10106681 3300028380 Bacteria 2276
178 Ga0268264_10020996 3300028381 Bacteria 5336
179 Ga0265323_10002362 3300028653 Bacteria 8695
180 Ga0265320_10002434 3300031240 Bacteria 12961
181 Ga0265325_10000386 3300031241 Bacteria 31166
182 Ga0265339_10012477 3300031249 Bacteria 5188
183 Ga0265331_10005411 3300031250 Bacteria 7714
184 Ga0265316_10001474 3300031344 Bacteria 25216
185 Ga0265316_10007729 3300031344 Bacteria 10074
186 Ga0265313_10010909 3300031595 Bacteria 5697
187 Ga0265314_10000345 3300031711 Bacteria 64760
188 Ga0265314_10002339 3300031711 Bacteria 19579
189 Ga0265314_10002471 3300031711 Bacteria 18895
190 Ga0373953_0003479 3300035117 Bacteria 4911
191 Ga0373954_0005968 3300035118 Bacteria 5299
192 Ga0373954_0010200 3300035118 Bacteria 4141
193 Ga0373955_0086674 3300035172 Bacteria 1779
194 Ga0373927_0006764 3300035695 Bacteria 7801
195 Ga0373937_0019301 3300036401 Bacteria 6102
196 Ga0373937_0032989 3300036401 Bacteria 4699
197 Ga0373937_0140789 3300036401 Bacteria 2257
198 Ga0373925_0104110 3300037068 Bacteria 2185
199 Ga0436364_0175627 3300037853 Bacteria 26156
200 Ga0436364_0236982 3300037853 Bacteria 3989
201 Ga0436364_0364416 3300037853 Bacteria 84577
202 Ga0436364_0768177 3300037853 Bacteria 5628
203 Ga0436364_1401175 3300037853 Bacteria 4997
204 Ga0436365_0285145 3300039437 Bacteria 5110
205 Ga0436365_0428077 3300039437 Bacteria 4755
206 Ga0436365_0566736 3300039437 Bacteria 4071
207 Ga0436360_0169275 3300039438 Bacteria 11285
208 Ga0436361_0419405 3300039447 Bacteria 103155
209 Ga0436363_0089207 3300039450 Unclassified 4911
210 Ga0436362_0101640 3300039453 Bacteria 5278
211 Ga0436362_0380575 3300039453 Bacteria 4037
212 Ga0451577_0005607 3300042876 Bacteria 12766
213 Ga0453683_0030408 3300044673 Bacteria 3414
214 Ga0453684_0008076 3300044712 Bacteria 19024
215 Ga0451576_0012177 3300045051 Bacteria 9694
216 Ga0466967_0095038 3300045976 Bacteria 2716
217 Ga0495580_0009234 3300046472 Bacteria 7769
218 Ga0495580_0010087 3300046472 Bacteria 7380
219 Ga0495664_0009666 3300046477 Bacteria 5400
220 Ga0495608_0044223 3300046511 Bacteria 2973
221 Ga0495628_0085516 3300046516 Bacteria 2446
222 Ga0495665_0024879 3300046531 Bacteria 3217
223 Ga0495587_0001448 3300046536 Bacteria 15816
224 Ga0495645_0039570 3300046543 Bacteria 3439
225 Ga0495645_0057362 3300046543 Bacteria 2826
226 Ga0495613_0063893 3300046689 Unclassified 2693
227 Ga0495649_0004949 3300046694 Bacteria 8581
228 Ga0495604_0070796 3300047317 Bacteria 2640
229 Ga0495674_0080155 3300047319 Bacteria 2802
230 Ga0495684_0005805 3300047471 Bacteria 9598
231 Ga0495684_0029854 3300047471 Bacteria 4185
232 Ga0495684_0038038 3300047471 Bacteria 3690
233 Ga0495684_0049550 3300047471 Bacteria 3208
234 Ga0495602_0004525 3300048088 Bacteria 14508
235 Ga0495602_0025686 3300048088 Bacteria 5696
236 Ga0496109_0000187 3300048912 Bacteria 61841
237 Ga0501034_0039509 3300049571 Bacteria 4779
238 Ga0501034_0046952 3300049571 Unclassified 4362
239 Ga0501036_0006462 3300049572 Bacteria 9522
240 Ga0501036_0067233 3300049572 Unclassified 3032
241 Ga0501037_0001447 3300049573 Bacteria 17428
242 Ga0501039_0009002 3300049575 Bacteria 7604
243 Ga0501043_0006162 3300049579 Bacteria 9632
244 Ga0501043_0107023 3300049579 Unclassified 2196
245 Ga0501046_0000783 3300049580 Bacteria 30741
246 Ga0501067_0001195 3300049583 Bacteria 14103
247 Ga0501068_0005905 3300049584 Bacteria 6722
248 Ga0501070_0117871 3300049586 Unclassified 2193
249 Ga0501072_0001455 3300049588 Bacteria 17748
250 Ga0501073_0000325 3300049589 Bacteria 31963
251 Ga0501074_0010241 3300049590 Bacteria 6803
252 Ga0501077_0007568 3300049593 Bacteria 6702
253 Ga0501079_0044759 3300049741 Bacteria 3415
254 Ga0501080_0000021 3300049742 Bacteria 91749
255 Ga0501035_0003973 3300049822 Bacteria 14094
256 Ga0501044_0003605 3300049823 Bacteria 17424
257 Ga0501044_0031670 3300049823 Bacteria 5565
258 nmdc:mga0qj67_93952_c1 3300050509 Bacteria 2412
259 nmdc:mga08y16_37362_c1 3300050511 Bacteria 5101
260 nmdc:mga08y16_6845_c1 3300050511 Bacteria 11951
261 nmdc:mga0n895_37085_c1 3300050512 Bacteria 4713
262 nmdc:mga0a205_24858_c1 3300050515 Bacteria 5700
263 nmdc:mga0a205_6831_c1 3300050515 Bacteria 10325
264 Ga0501084_0001230 3300054114 Bacteria 20169
265 2856288734 2856287931 Bacteria 7223934
266 2857362117 2857357740 Bacteria 9937880
267 Ga0075433_10002996
268 Ga0070683_100004024
269 Ga0070683_100067313
270 Ga0070666_10016803
271 Ga0070666_10073359
272 Ga0070680_100003693
273 Ga0068868_100010342
274 Ga0070660_100001736
275 Ga0070660_100049300
276 Ga0070660_100074308
277 Ga0070691_10000928
278 Ga0070661_100062709
279 Ga0070659_100041751
280 Ga0070667_100072716
281 Ga0070714_100002697
282 Ga0070713_100000494
283 Ga0070711_100002930
284 Ga0070694_100015861
285 Ga0070662_100036526
286 Ga0070681_10007133
287 Ga0070681_10014512
288 Ga0070681_10016012
289 Ga0070707_100000552
290 Ga0070707_100150517
291 Ga0070699_100082285
292 Ga0070679_100000611
293 Ga0070684_100001326
294 Ga0070695_100035176
295 Ga0070665_100025866
296 Ga0070665_100076372
297 Ga0068855_100003835
298 Ga0068855_100040552
299 Ga0068855_100042572
300 Ga0068857_100001630
301 Ga0068857_100016578
302 Ga0068857_100062130
303 Ga0068856_100006368
304 Ga0068856_100014642
305 Ga0068859_100056205
306 Ga0068859_100108872
307 Ga0068859_100112040
308 Ga0068858_100001223
309 Ga0068860_100052528
310 Ga0068860_100085343
311 Ga0068862_100046860
312 Ga0081455_10032614
313 Ga0081538_10015056
314 Ga0081539_10003888
315 Ga0070717_10014455
316 Ga0070717_10038329
317 Ga0097621_100014176
318 Ga0068871_100022484
319 Ga0068871_100061251
320 Ga0075431_100000073
321 Ga0068865_100023388
322 Ga0097620_100056203
323 Ga0097620_100108867
324 Ga0097620_100112038
325 Ga0105240_10000734
326 Ga0105240_10003130
327 Ga0105240_10008079
328 Ga0105240_10025184
329 Ga0105240_10052025
330 Ga0105240_10164578
331 Ga0105245_10002936
332 Ga0114129_10133751
333 Ga0105243_10032723
334 Ga0105243_10034042
335 Ga0105241_10005694
336 Ga0105242_10015672
337 Ga0105242_10048414
338 Ga0105242_10073177
339 Ga0105248_10058891
340 Ga0105248_10076108
341 Ga0105237_10003358
342 Ga0105237_10004997
343 Ga0105237_10050467
344 Ga0105237_10052812
345 Ga0105237_10104493
346 Ga0105238_10003861
347 Ga0105238_10015927
348 Ga0105238_10018907
349 Ga0105238_10030245
350 Ga0105249_10074515
351 Ga0105239_10002187
352 Ga0105239_10028882
353 Ga0105239_10047358
354 Ga0105239_10085244
355 Ga0105239_10088293
356 Ga0105239_10092958
357 Ga0157371_10111018
358 Ga0157370_10010864
359 Ga0157370_10017357
360 Ga0157370_10031888
361 Ga0157369_10004879
362 Ga0157369_10025686
363 Ga0157369_10034392
364 Ga0157369_10038983
365 Ga0157369_10146414
366 Ga0157374_10013445
367 Ga0157374_10015754
368 Ga0157374_10082427
369 Ga0157378_10091584
370 Ga0157372_10006695
371 Ga0157372_10044200
372 Ga0157372_10089612
373 Ga0157375_10000960
374 Ga0157375_10012973
375 Ga0163163_10017935
376 Ga0163163_10076513
377 Ga0157379_10062237
378 Ga0213872_10000545
379 Ga0213876_10014086
380 Ga0213875_10000029
381 Ga0213875_10020067
382 Ga0213875_10021131
383 Ga0207680_10003696
384 Ga0207654_10050446
385 Ga0207707_10000342
386 Ga0207695_10001377
387 Ga0207695_10002645
388 Ga0207695_10005068
389 Ga0207695_10032892
390 Ga0207695_10083690
391 Ga0207671_10003958
392 Ga0207671_10019876
393 Ga0207660_10013991
394 Ga0207657_10003147
395 Ga0207649_10048767
396 Ga0207652_10006289
397 Ga0207646_10000933
398 Ga0207694_10000227
399 Ga0207694_10002210
400 Ga0207694_10011269
401 Ga0207694_10018754
402 Ga0207694_10067639
403 Ga0207694_10072401
404 Ga0207687_10007824
405 Ga0207687_10010175
406 Ga0207687_10013596
407 Ga0207687_10086457
408 Ga0207664_10003316
409 Ga0207690_10034013
410 Ga0207686_10003863
411 Ga0207686_10079436
412 Ga0207670_10029238
413 Ga0207704_10015434
414 Ga0207704_10016162
415 Ga0207711_10004094
416 Ga0207711_10078284
417 Ga0207711_10096270
418 Ga0207661_10002550
419 Ga0207661_10088714
420 Ga0207667_10002537
421 Ga0207667_10006875
422 Ga0207667_10008499
423 Ga0207667_10034846
424 Ga0207658_10038973
425 Ga0207703_10006055
426 Ga0207639_10008182
427 Ga0207639_10010789
428 Ga0207702_10002752
429 Ga0207702_10009221
430 Ga0207702_10011606
431 Ga0207702_10026316
432 Ga0207702_10102284
433 Ga0207702_10153601
434 Ga0207641_10120052
435 Ga0207648_10020288
436 Ga0207674_10000771
437 Ga0207674_10005667
438 Ga0207674_10020143
439 Ga0207698_10002633
440 Ga0207428_10000367
441 Ga0207428_10023002
442 Ga0268266_10084813
443 Ga0268265_10106681
444 Ga0268264_10020996
445 Ga0265323_10002362
446 Ga0265320_10002434
447 Ga0265325_10000386
448 Ga0265339_10012477
449 Ga0265331_10005411
450 Ga0265316_10001474
451 Ga0265316_10007729
452 Ga0265313_10010909
453 Ga0265314_10000345
454 Ga0265314_10002339
455 Ga0265314_10002471
456 Ga0373953_0003479
457 Ga0373954_0005968
458 Ga0373954_0010200
459 Ga0373955_0086674
460 Ga0373927_0006764
461 Ga0373937_0019301
462 Ga0373937_0032989
463 Ga0373937_0140789
464 Ga0373925_0104110
465 Ga0436364_0175627
466 Ga0436364_0236982
467 Ga0436364_0364416
468 Ga0436364_0768177
469 Ga0436364_1401175
470 Ga0436365_0285145
471 Ga0436365_0428077
472 Ga0436365_0566736
473 Ga0436360_0169275
474 Ga0436361_0419405
475 Ga0436363_0089207
476 Ga0436362_0101640
477 Ga0436362_0380575
478 Ga0451577_0005607
479 Ga0453683_0030408
480 Ga0453684_0008076
481 Ga0451576_0012177
482 Ga0466967_0095038
483 Ga0495580_0009234
484 Ga0495580_0010087
485 Ga0495664_0009666
486 Ga0495608_0044223
487 Ga0495628_0085516
488 Ga0495665_0024879
489 Ga0495587_0001448
490 Ga0495645_0039570
491 Ga0495645_0057362
492 Ga0495613_0063893
493 Ga0495649_0004949
494 Ga0495604_0070796
495 Ga0495674_0080155
496 Ga0495684_0005805
497 Ga0495684_0029854
498 Ga0495684_0038038
499 Ga0495684_0049550
500 Ga0495602_0004525
501 Ga0495602_0025686
502 Ga0496109_0000187
503 Ga0501034_0039509
504 Ga0501034_0046952
505 Ga0501036_0006462
506 Ga0501036_0067233
507 Ga0501037_0001447
508 Ga0501039_0009002
509 Ga0501043_0006162
510 Ga0501043_0107023
511 Ga0501046_0000783
512 Ga0501067_0001195
513 Ga0501068_0005905
514 Ga0501070_0117871
515 Ga0501072_0001455
516 Ga0501073_0000325
517 Ga0501074_0010241
518 Ga0501077_0007568
519 Ga0501079_0044759
520 Ga0501080_0000021
521 Ga0501035_0003973
522 Ga0501044_0003605
523 Ga0501044_0031670
524 nmdc:mga0qj67_93952_c1
525 nmdc:mga08y16_37362_c1
526 nmdc:mga08y16_6845_c1
527 nmdc:mga0n895_37085_c1
528 nmdc:mga0a205_24858_c1
529 nmdc:mga0a205_6831_c1
530 Ga0501084_0001230
531 2856288734
532 2857362117

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13243

SQHop_cyclase_C

Squalene-hopene cyclase C-terminal domain

382

691

0.98

PF13249

SQHop_cyclase_N

Squalene-hopene cyclase N-terminal domain

85

374

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3sqc-assembly3.cif.gz_C squalene-hopene cyclase 0.9207 17 627
1gsz-assembly1.cif.gz_A crystal structure of a squalene cyclase in complex with the potential anticholesteremic drug ro48-8071 0.9204 19 627
3sqc-assembly3.cif.gz_C squalene-hopene cyclase 0.9078 17 627
1gsz-assembly1.cif.gz_A crystal structure of a squalene cyclase in complex with the potential anticholesteremic drug ro48-8071 0.9045 19 627
2sqc-assembly1.cif.gz_A squalene-hopene cyclase from alicyclobacillus acidocaldarius 0.8862 14 629
ID Description Score Start End Superfamily
1h35A01 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9665 311 627 1.50.10.20
af_A0A1D6LG90_353_536_1.50.10.20 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9153 450 595 1.50.10.20
af_A0A1D6GVH8_540_765_1.50.10.20 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9122 414 623 1.50.10.20
1w6kA02 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.8917 311 626 1.50.10.20
af_Q55D85_364_695_1.50.10.20 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.8838 313 624 1.50.10.20
ID Description Score Start End GO Terms
AF-A0A7C4BYL1-F1-model_v4 Squalene--hopene cyclase 0.9808 517 624 GO:0005811
GO:0016020
GO:0016104
GO:0016866
AF-B1PWQ2-F1-model_v4 Squalene hopene cyclase 0.9776 311 536 GO:0016104
GO:0016866
AF-A0A2N9N9L4-F1-model_v4 Squalene--hopene cyclase (EC 4.2.1.129, EC 5.4.99.17) 0.9765 211 629 GO:0005811
GO:0016104
GO:0016829
GO:0051007
AF-R9VYT6-F1-model_v4 Squalene-hopene cyclase (EC 5.4.99.17) 0.9751 311 536 GO:0005811
GO:0016104
GO:0051007
AF-A0A2N9LZN2-F1-model_v4 Squalene--hopene cyclase (EC 4.2.1.129, EC 5.4.99.17) 0.9737 358 629 GO:0005811
GO:0016104
GO:0016829
GO:0051007

Map