F373912

General Info

Members Datasets Scaffolds Average Seq Length
266 171 259 266

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100001745|Ga0070706_10000174517
Length 292
Sequence MIAIEHLAKRFHVVASPAKTGLTGLVKLARRAAPRIVHAVRDVSFEAPDGRITGLLGPNGAGKTTTLRMLAGLITPDAGSLHVDGVDVARAPRDALARMGMLSDARGLYPRLTARENIVYYGRLQGMTRDAANARAEHLAQMFEMGALLDRRTDGFSQGERMKTSLARALVHDPANIVLDEPTNGLDVLATRALRDSLRWLRSPEGGAKCIVFSTHIMQEVERLCDGVVVVSHGRTVARGTVSELLAQTGQADFEEAFVQLAFSADERAHHEAQVDAAVEMVDATTVDGTAA

Samples

Sample ID Description Type Environment
1 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
2 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
3 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
4 2643221585 Pelomonas sp. Root662 Isolate Unclassified
5 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
6 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
7 2643221656 Pelomonas sp. Root405 Isolate Unclassified
8 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
9 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
12 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
40 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
44 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300012512 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510 Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
54 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
55 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
57 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
58 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
93 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
94 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
95 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
96 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
97 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
98 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
99 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
100 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
101 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
102 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
103 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
109 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
110 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
111 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
112 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
113 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
114 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
115 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
116 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
117 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
118 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
119 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
120 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
121 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
122 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
123 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
124 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
125 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
126 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
127 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
133 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
134 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
135 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
136 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
137 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
138 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
139 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
140 3300049687 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_A_4_drought Metagenome Rhizosphere
141 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
142 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
143 3300049757 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_B_2_control Metagenome Rhizosphere
144 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
145 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
146 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
147 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
148 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
149 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
150 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
151 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
152 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
153 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
154 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
155 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
156 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
157 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
158 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
159 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
160 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
161 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
162 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
163 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
164 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
165 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
166 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
167 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
168 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
169 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
170 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
171 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.37
Metatranscriptomes 0
Isolates 2.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 33.46
Nodule 0
Rhizoplane 1.5
Rhizosphere 49.62
Stem 0
Stem Tuber 0
Unclassified 15.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25150J39212_1011064 3300002774 Bacteria 1650
2 JGI25153J46596_10000413 3300003215 Bacteria 28090
3 rootL2_10030316 3300003322 Bacteria 3573
4 Ga0055525_1000036 3300003759 Bacteria 298878
5 Ga0055540_1000093 3300003792 Bacteria 98452
6 Ga0055531_10001290 3300003794 Bacteria 18878
7 Ga0070658_10084962 3300005327 Bacteria 2602
8 Ga0070670_100164899 3300005331 Bacteria 1921
9 Ga0070680_100007501 3300005336 Bacteria 8318
10 Ga0070661_100005532 3300005344 Bacteria 8707
11 Ga0070675_100015765 3300005354 Bacteria 5981
12 Ga0070673_100230994 3300005364 Bacteria 1605
13 Ga0070688_100249565 3300005365 Bacteria 1263
14 Ga0070659_100001958 3300005366 Bacteria 14717
15 Ga0070667_100005441 3300005367 Bacteria 10634
16 Ga0070667_100146005 3300005367 Bacteria 2075
17 Ga0070663_100004366 3300005455 Bacteria 8297
18 Ga0070663_100053062 3300005455 Bacteria 2893
19 Ga0070662_100041560 3300005457 Bacteria 3280
20 Ga0068867_100000004 3300005459 Bacteria 180739
21 Ga0070706_100001745 3300005467 Bacteria 22564
22 Ga0070679_100010923 3300005530 Bacteria 8629
23 Ga0070686_100550641 3300005544 Bacteria 902
24 Ga0070665_100029507 3300005548 Bacteria 5521
25 Ga0070664_100004866 3300005564 Bacteria 10758
26 Ga0070664_100142874 3300005564 Bacteria 2109
27 Ga0068857_100220876 3300005577 Bacteria 1731
28 Ga0068856_100158991 3300005614 Bacteria 2270
29 Ga0068852_100412522 3300005616 Bacteria 1331
30 Ga0068859_100036763 3300005617 Bacteria 4916
31 Ga0068864_100037464 3300005618 Bacteria 4138
32 Ga0068864_100094030 3300005618 Bacteria 2649
33 Ga0068870_10174336 3300005840 Bacteria 1286
34 Ga0068858_100365724 3300005842 Bacteria 1383
35 Ga0075365_10041803 3300006038 Bacteria 2995
36 Ga0075368_10037103 3300006042 Bacteria 1905
37 Ga0075368_10067022 3300006042 Bacteria 1444
38 Ga0075368_10080595 3300006042 Bacteria 1324
39 Ga0075363_100019016 3300006048 Bacteria 3429
40 Ga0075363_100021838 3300006048 Bacteria 3230
41 Ga0075363_100072303 3300006048 Bacteria 1875
42 Ga0075362_10004451 3300006177 Bacteria 5038
43 Ga0075362_10012085 3300006177 Bacteria 3419
44 Ga0075362_10018656 3300006177 Bacteria 2874
45 Ga0075367_10211943 3300006178 Bacteria 1211
46 Ga0075367_10216515 3300006178 Bacteria 1198
47 Ga0075366_10000870 3300006195 Bacteria 14567
48 Ga0075366_10004387 3300006195 Bacteria 7571
49 Ga0075366_10015085 3300006195 Bacteria 4420
50 Ga0075366_10031545 3300006195 Bacteria 3119
51 Ga0075366_10064869 3300006195 Bacteria 2172
52 Ga0075366_10128517 3300006195 Bacteria 1529
53 Ga0075366_10185961 3300006195 Bacteria 1262
54 Ga0075370_10000638 3300006353 Bacteria 13583
55 Ga0075370_10001028 3300006353 Bacteria 11581
56 Ga0075370_10001503 3300006353 Bacteria 10182
57 Ga0075370_10004837 3300006353 Bacteria 6603
58 Ga0075370_10008598 3300006353 Bacteria 5263
59 Ga0075370_10052819 3300006353 Bacteria 2306
60 Ga0068865_100083610 3300006881 Bacteria 2298
61 Ga0097620_100036763 3300006931 Bacteria 4916
62 Ga0105240_10021285 3300009093 Bacteria 8627
63 Ga0105240_10039041 3300009093 Bacteria 6083
64 Ga0105243_10000569 3300009148 Bacteria 37205
65 Ga0105248_10013324 3300009177 Bacteria 9050
66 Ga0105237_10039833 3300009545 Bacteria 4741
67 Ga0157327_1007943 3300012512 Bacteria 938
68 Ga0157378_10152520 3300013297 Bacteria 2154
69 Ga0157378_10406871 3300013297 Bacteria 1342
70 Ga0157377_10000010 3300014745 Bacteria 380929
71 Ga0157379_10044439 3300014968 Bacteria 3966
72 Ga0209563_100014 3300025230 Bacteria 940582
73 Ga0207427_100301 3300025231 Bacteria 34522
74 Ga0209758_1000177 3300025297 Bacteria 142824
75 Ga0209050_1000665 3300025298 Bacteria 52282
76 Ga0209050_1000975 3300025298 Bacteria 36650
77 Ga0209256_1064857 3300025299 Bacteria 839
78 Ga0209051_1000004 3300025303 Bacteria 1155596
79 Ga0209051_1001639 3300025303 Bacteria 18161
80 Ga0209257_1000038 3300025304 Bacteria 609032
81 Ga0209257_1000044 3300025304 Bacteria 486709
82 Ga0207682_10021972 3300025893 Bacteria 2511
83 Ga0207643_10124217 3300025908 Bacteria 1531
84 Ga0207705_10270399 3300025909 Bacteria 1299
85 Ga0207684_10010010 3300025910 Bacteria 8355
86 Ga0207695_10139012 3300025913 Bacteria 2380
87 Ga0207652_10015887 3300025921 Bacteria 6134
88 Ga0207646_10310717 3300025922 Bacteria 1424
89 Ga0207681_10061267 3300025923 Bacteria 2586
90 Ga0207690_10000831 3300025932 Bacteria 19793
91 Ga0207706_10007785 3300025933 Bacteria 9885
92 Ga0207706_10074055 3300025933 Bacteria 2994
93 Ga0207709_10001632 3300025935 Bacteria 15246
94 Ga0207704_10081310 3300025938 Bacteria 2095
95 Ga0207691_10023278 3300025940 Bacteria 5831
96 Ga0207691_10042218 3300025940 Bacteria 4205
97 Ga0207689_10029351 3300025942 Bacteria 4594
98 Ga0207679_10000629 3300025945 Bacteria 23458
99 Ga0207679_10276835 3300025945 Bacteria 1437
100 Ga0207651_10162732 3300025960 Bacteria 1751
101 Ga0207658_10004663 3300025986 Bacteria 9500
102 Ga0207658_10072979 3300025986 Bacteria 2604
103 Ga0207677_10006234 3300026023 Bacteria 6523
104 Ga0207639_10135169 3300026041 Bacteria 2047
105 Ga0207678_10001341 3300026067 Bacteria 22686
106 Ga0207702_10128263 3300026078 Bacteria 2280
107 Ga0207641_10800436 3300026088 Bacteria 932
108 Ga0207648_10000002 3300026089 Bacteria 307909
109 Ga0207648_10008024 3300026089 Bacteria 10288
110 Ga0207676_10066674 3300026095 Bacteria 2872
111 Ga0207674_10067421 3300026116 Bacteria 3603
112 Ga0207683_10606016 3300026121 Bacteria 1014
113 Ga0207698_10099327 3300026142 Bacteria 2407
114 Ga0207698_10318688 3300026142 Bacteria 1455
115 Ga0209813_10019003 3300027866 Bacteria 1905
116 Ga0268266_10036002 3300028379 Bacteria 4210
117 Ga0268264_10020036 3300028381 Bacteria 5465
118 Ga0268264_10688227 3300028381 Bacteria 1015
119 Ga0307517_10001027 3300028786 Bacteria 47444
120 Ga0307517_10064707 3300028786 Bacteria 3395
121 Ga0307517_10147451 3300028786 Bacteria 1627
122 Ga0307515_10000374 3300028794 Bacteria 109304
123 Ga0307515_10000585 3300028794 Bacteria 85580
124 Ga0307515_10004409 3300028794 Bacteria 29143
125 Ga0307515_10033948 3300028794 Bacteria 8377
126 Ga0307515_10068990 3300028794 Bacteria 4844
127 Ga0307515_10088778 3300028794 Bacteria 3902
128 Ga0307511_10102946 3300030521 Bacteria 1863
129 Ga0307512_10094542 3300030522 Bacteria 2062
130 Ga0307512_10195779 3300030522 Bacteria 1104
131 Ga0307513_10004569 3300031456 Bacteria 18452
132 Ga0307513_10091310 3300031456 Bacteria 3104
133 Ga0307509_10000993 3300031507 Bacteria 48743
134 Ga0307509_10010193 3300031507 Bacteria 11559
135 Ga0307509_10067403 3300031507 Bacteria 3750
136 Ga0307509_10067676 3300031507 Bacteria 3740
137 Ga0307509_10104981 3300031507 Bacteria 2848
138 Ga0307509_10170305 3300031507 Bacteria 2058
139 Ga0307509_10291296 3300031507 Bacteria 1387
140 Ga0307508_10000539 3300031616 Bacteria 44995
141 Ga0307508_10001778 3300031616 Bacteria 23959
142 Ga0307508_10002735 3300031616 Bacteria 18411
143 Ga0307508_10093297 3300031616 Bacteria 2600
144 Ga0307508_10217433 3300031616 Bacteria 1511
145 Ga0307514_10034121 3300031649 Bacteria 4056
146 Ga0307514_10161992 3300031649 Bacteria 1479
147 Ga0307516_10001017 3300031730 Bacteria 38881
148 Ga0307516_10003030 3300031730 Bacteria 21913
149 Ga0307413_10208008 3300031824 Bacteria 1419
150 Ga0307507_10056850 3300033179 Bacteria 3691
151 Ga0307510_10000129 3300033180 Bacteria 60839
152 Ga0307510_10009594 3300033180 Bacteria 11535
153 Ga0307510_10104490 3300033180 Bacteria 2605
154 Ga0307510_10159909 3300033180 Bacteria 1851
155 Ga0373937_0101294 3300036401 Bacteria 2673
156 Ga0373937_0405922 3300036401 Bacteria 1293
157 Ga0373925_0021961 3300037068 Bacteria 4652
158 Ga0373925_0209723 3300037068 Bacteria 1552
159 Ga0395905_0084397 3300037471 Bacteria 2975
160 Ga0395905_0153453 3300037471 Bacteria 2166
161 Ga0436365_1376965 3300039437 Bacteria 1770
162 Ga0451577_0000941 3300042876 Bacteria 42690
163 Ga0453684_0022762 3300044712 Bacteria 9278
164 Ga0453684_0275517 3300044712 Bacteria 1921
165 Ga0495592_0004068 3300046454 Bacteria 10635
166 Ga0495638_0071865 3300046460 Bacteria 2116
167 Ga0495583_0000022 3300046506 Bacteria 282544
168 Ga0495583_0025859 3300046506 Bacteria 2924
169 Ga0495606_0006794 3300046507 Bacteria 10456
170 Ga0495610_0009558 3300046512 Bacteria 6115
171 Ga0495628_0351818 3300046516 Bacteria 1083
172 Ga0495632_0014804 3300046519 Bacteria 4399
173 Ga0495632_0016449 3300046519 Bacteria 4114
174 Ga0495586_0337751 3300046535 Bacteria 865
175 Ga0495621_0001983 3300046539 Bacteria 5385
176 Ga0495621_0044902 3300046539 Bacteria 1563
177 Ga0495625_0001405 3300046660 Bacteria 29481
178 Ga0495625_0007137 3300046660 Bacteria 9811
179 Ga0495625_0026508 3300046660 Bacteria 4380
180 Ga0495658_0140259 3300046683 Bacteria 1478
181 Ga0495669_0157665 3300046684 Bacteria 1076
182 Ga0495649_0001087 3300046694 Bacteria 21193
183 Ga0495649_0001790 3300046694 Bacteria 15814
184 Ga0495589_0025820 3300046794 Bacteria 2978
185 Ga0495687_001215 3300047443 Bacteria 24645
186 Ga0495687_035848 3300047443 Bacteria 2225
187 Ga0495686_0002515 3300047472 Bacteria 17179
188 Ga0495602_0174333 3300048088 Bacteria 1666
189 Ga0495626_0045038 3300048091 Bacteria 2061
190 Ga0496104_0173276 3300048907 Bacteria 2068
191 Ga0496105_0236563 3300048908 Bacteria 1483
192 Ga0496108_0133121 3300048911 Bacteria 2137
193 Ga0496112_0024543 3300048915 Bacteria 5775
194 Ga0495682_0072124 3300049460 Bacteria 1243
195 Ga0495682_0091442 3300049460 Bacteria 1093
196 Ga0501294_001623 3300049517 Bacteria 2232
197 Ga0501300_001497 3300049523 Bacteria 3504
198 Ga0501207_019800 3300049654 Bacteria 1070
199 Ga0501211_002741 3300049658 Bacteria 1847
200 Ga0501222_005521 3300049662 Bacteria 1704
201 Ga0501235_007633 3300049669 Bacteria 2357
202 Ga0501253_018016 3300049683 Bacteria 1199
203 Ga0501258_002747 3300049687 Bacteria 1567
204 Ga0501221_001259 3300049704 Bacteria 4194
205 Ga0501229_004235 3300049706 Bacteria 1739
206 Ga0501232_010585 3300049757 Bacteria 1043
207 Ga0501264_002423 3300049761 Bacteria 1743
208 Ga0501265_001163 3300049762 Bacteria 2975
209 Ga0501267_001058 3300049764 Bacteria 2289
210 Ga0501272_001681 3300049769 Bacteria 2128
211 nmdc:mga03n38_149808_c1 3300050490 Bacteria 1173
212 nmdc:mga03n38_3672_c1 3300050490 Bacteria 4965
213 nmdc:mga03n38_46766_c1 3300050490 Bacteria 1912
214 nmdc:mga00v17_10121_c1 3300050491 Bacteria 5138
215 nmdc:mga0k408_111818_c1 3300050493 Bacteria 1615
216 nmdc:mga0k408_223_c2 3300050493 Bacteria 25073
217 nmdc:mga0k408_298461_c1 3300050493 Bacteria 962
218 nmdc:mga0k408_30298_c1 3300050493 Bacteria 3085
219 nmdc:mga0k408_310872_c1 3300050493 Bacteria 941
220 nmdc:mga0k408_36171_c1 3300050493 Bacteria 2834
221 nmdc:mga0k408_4757_c1 3300050493 Bacteria 7194
222 nmdc:mga0k408_59465_c1 3300050493 Bacteria 2220
223 nmdc:mga0k408_70418_c1 3300050493 Bacteria 2041
224 nmdc:mga0k408_87273_c1 3300050493 Bacteria 1832
225 nmdc:mga06z11_103282_c1 3300050494 Bacteria 1567
226 nmdc:mga06z11_16306_c1 3300050494 Bacteria 3343
227 nmdc:mga06z11_258102_c1 3300050494 Bacteria 1028
228 nmdc:mga06z11_42027_c1 3300050494 Bacteria 2290
229 nmdc:mga04h51_7178_c1 3300050495 Bacteria 2929
230 nmdc:mga07m45_1355_c1 3300050496 Bacteria 11165
231 nmdc:mga07m45_1564_c1 3300050496 Bacteria 10533
232 nmdc:mga07m45_183_c1 3300050496 Bacteria 24910
233 nmdc:mga07m45_264972_c1 3300050496 Bacteria 1000
234 nmdc:mga07m45_3354_c1 3300050496 Bacteria 7720
235 nmdc:mga07m45_59451_c1 3300050496 Bacteria 2163
236 nmdc:mga07m45_8021_c1 3300050496 Bacteria 5414
237 nmdc:mga07m45_84214_c1 3300050496 Bacteria 1818
238 nmdc:mga07m45_9596_c1 3300050496 Bacteria 5029
239 Ga0495601_0152096 3300053077 Bacteria 1511
240 Ga0500578_0074349 3300053086 Bacteria 2165
241 Ga0500578_0115709 3300053086 Bacteria 1688
242 Ga0500644_0001115 3300053088 Bacteria 7912
243 Ga0500644_0035073 3300053088 Bacteria 1623
244 Ga0500647_0087518 3300053091 Bacteria 1493
245 Ga0500651_0016127 3300053093 Bacteria 4592
246 Ga0500651_0113876 3300053093 Bacteria 1648
247 Ga0500594_0002533 3300053118 Bacteria 3975
248 Ga0500655_003404 3300053133 Bacteria 2877
249 Ga0500658_0009086 3300053134 Bacteria 3668
250 Ga0500559_0000047 3300053136 Bacteria 95447
251 Ga0500564_125741 3300053138 Bacteria 1113
252 Ga0500590_002188 3300053148 Bacteria 8529
253 Ga0500604_0016873 3300053151 Bacteria 2014
254 Ga0500619_041876 3300053154 Bacteria 1450
255 Ga0500622_0001747 3300053156 Bacteria 16748
256 Ga0500636_0046390 3300053177 Bacteria 2562
257 Ga0500645_001983 3300053730 Bacteria 9648
258 Ga0500587_001828 3300053739 Bacteria 3026
259 Ga0500661_003075 3300055283 Bacteria 3137

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005336 Ga0070680_100007501 Ga0070680_1000075013 234
2 3300005530 Ga0070679_100010923 Ga0070679_1000109234 234
3 3300025921 Ga0207652_10015887 Ga0207652_100158874 234
4 3300036401 Ga0373937_0405922 Ga0373937_0405922_59_799 235
5 3300050496 nmdc:mga07m45_264972_c1 nmdc:mga07m45_264972_c1_36_761 238
6 3300044712 Ga0453684_0275517 Ga0453684_0275517_996_1772 239
7 3300039437 Ga0436365_1376965 Ga0436365_1376965_189_989 240
8 3300009093 Ga0105240_10021285 Ga0105240_100212852 242
9 3300009545 Ga0105237_10039833 Ga0105237_100398334 242
10 3300025913 Ga0207695_10139012 Ga0207695_101390122 242
11 iso_pu_bacteria 2585428062 2587756757 242
12 iso_pu_bacteria 2643221585 2643934723 242
13 iso_pu_bacteria 2643221639 2644218983 242
14 iso_pu_bacteria 2643221646 2644255496 242
15 iso_pu_bacteria 2643221656 2644316209 242
16 3300050493 nmdc:mga0k408_111818_c1 nmdc:mga0k408_111818_c1_244_1017 244
17 3300003792 Ga0055540_1000093 Ga0055540_100009366 245
18 3300003794 Ga0055531_10001290 Ga0055531_100012907 245
19 3300005327 Ga0070658_10084962 Ga0070658_100849622 245
20 3300005544 Ga0070686_100550641 Ga0070686_1005506411 245
21 3300025231 Ga0207427_100301 Ga0207427_10030117 245
22 3300025298 Ga0209050_1000665 Ga0209050_100066518 245
23 3300025303 Ga0209051_1000004 Ga0209051_1000004421 245
24 3300025303 Ga0209051_1001639 Ga0209051_10016394 245
25 3300025304 Ga0209257_1000038 Ga0209257_1000038555 245
26 3300025304 Ga0209257_1000044 Ga0209257_10000444 245
27 3300025909 Ga0207705_10270399 Ga0207705_102703992 245
28 3300028794 Ga0307515_10000374 Ga0307515_1000037435 245
29 3300028794 Ga0307515_10000585 Ga0307515_1000058524 245
30 3300028794 Ga0307515_10033948 Ga0307515_100339482 245
31 3300031507 Ga0307509_10067403 Ga0307509_100674032 245
32 3300031507 Ga0307509_10170305 Ga0307509_101703052 245
33 3300031507 Ga0307509_10291296 Ga0307509_102912962 245
34 3300031616 Ga0307508_10001778 Ga0307508_100017785 245
35 3300031649 Ga0307514_10034121 Ga0307514_100341215 245
36 3300033179 Ga0307507_10056850 Ga0307507_100568504 245
37 3300046506 Ga0495583_0000022 Ga0495583_0000022_61237_61998 245
38 3300046507 Ga0495606_0006794 Ga0495606_0006794_6057_6818 245
39 3300046660 Ga0495625_0007137 Ga0495625_0007137_2369_3130 245
40 3300046684 Ga0495669_0157665 Ga0495669_0157665_236_997 245
41 3300046694 Ga0495649_0001087 Ga0495649_0001087_10329_11090 245
42 3300046794 Ga0495589_0025820 Ga0495589_0025820_888_1649 245
43 3300050493 nmdc:mga0k408_59465_c1 nmdc:mga0k408_59465_c1_1026_1790 245
44 3300053086 Ga0500578_0074349 Ga0500578_0074349_235_996 245
45 3300053088 Ga0500644_0035073 Ga0500644_0035073_456_1232 245
46 3300055283 Ga0500661_003075 Ga0500661_003075_1514_2275 245
47 3300005344 Ga0070661_100005532 Ga0070661_1000055328 246
48 3300005366 Ga0070659_100001958 Ga0070659_1000019584 246
49 3300005548 Ga0070665_100029507 Ga0070665_1000295077 246
50 3300005564 Ga0070664_100004866 Ga0070664_1000048665 246
51 3300005617 Ga0068859_100036763 Ga0068859_1000367632 246
52 3300005618 Ga0068864_100094030 Ga0068864_1000940302 246
53 3300005840 Ga0068870_10174336 Ga0068870_101743362 246
54 3300005842 Ga0068858_100365724 Ga0068858_1003657242 246
55 3300006931 Ga0097620_100036763 Ga0097620_1000367632 246
56 3300013297 Ga0157378_10406871 Ga0157378_104068712 246
57 3300014968 Ga0157379_10044439 Ga0157379_100444392 246
58 3300025893 Ga0207682_10021972 Ga0207682_100219723 246
59 3300025908 Ga0207643_10124217 Ga0207643_101242172 246
60 3300025923 Ga0207681_10061267 Ga0207681_100612672 246
61 3300025932 Ga0207690_10000831 Ga0207690_100008319 246
62 3300025940 Ga0207691_10023278 Ga0207691_100232782 246
63 3300025945 Ga0207679_10000629 Ga0207679_1000062921 246
64 3300025986 Ga0207658_10072979 Ga0207658_100729792 246
65 3300026023 Ga0207677_10006234 Ga0207677_100062342 246
66 3300026121 Ga0207683_10606016 Ga0207683_106060162 246
67 3300028379 Ga0268266_10036002 Ga0268266_100360025 246
68 3300028381 Ga0268264_10688227 Ga0268264_106882272 246
69 3300028794 Ga0307515_10004409 Ga0307515_1000440922 246
70 3300028794 Ga0307515_10088778 Ga0307515_100887782 246
71 3300031456 Ga0307513_10004569 Ga0307513_100045694 246
72 3300031730 Ga0307516_10003030 Ga0307516_100030307 246
73 3300036401 Ga0373937_0101294 Ga0373937_0101294_1655_2431 246
74 3300042876 Ga0451577_0000941 Ga0451577_0000941_14610_15404 246
75 3300046512 Ga0495610_0009558 Ga0495610_0009558_2857_3636 246
76 3300046519 Ga0495632_0014804 Ga0495632_0014804_2308_3087 246
77 3300046539 Ga0495621_0001983 Ga0495621_0001983_1932_2714 246
78 3300046539 Ga0495621_0044902 Ga0495621_0044902_186_968 246
79 3300046660 Ga0495625_0001405 Ga0495625_0001405_19255_20034 246
80 3300049517 Ga0501294_001623 Ga0501294_001623_293_1075 246
81 3300049523 Ga0501300_001497 Ga0501300_001497_1734_2516 246
82 3300049654 Ga0501207_019800 Ga0501207_019800_213_995 246
83 3300049658 Ga0501211_002741 Ga0501211_002741_750_1532 246
84 3300049662 Ga0501222_005521 Ga0501222_005521_630_1412 246
85 3300049669 Ga0501235_007633 Ga0501235_007633_994_1776 246
86 3300049683 Ga0501253_018016 Ga0501253_018016_101_883 246
87 3300049687 Ga0501258_002747 Ga0501258_002747_288_1070 246
88 3300049704 Ga0501221_001259 Ga0501221_001259_1254_2036 246
89 3300049706 Ga0501229_004235 Ga0501229_004235_910_1692 246
90 3300049757 Ga0501232_010585 Ga0501232_010585_47_829 246
91 3300049761 Ga0501264_002423 Ga0501264_002423_367_1149 246
92 3300049762 Ga0501265_001163 Ga0501265_001163_1463_2245 246
93 3300049764 Ga0501267_001058 Ga0501267_001058_1095_1877 246
94 3300049769 Ga0501272_001681 Ga0501272_001681_1112_1894 246
95 3300050493 nmdc:mga0k408_310872_c1 nmdc:mga0k408_310872_c1_120_899 246
96 3300050493 nmdc:mga0k408_36171_c1 nmdc:mga0k408_36171_c1_1641_2420 246
97 3300050493 nmdc:mga0k408_70418_c1 nmdc:mga0k408_70418_c1_563_1342 246
98 3300050496 nmdc:mga07m45_59451_c1 nmdc:mga07m45_59451_c1_650_1429 246
99 3300050496 nmdc:mga07m45_84214_c1 nmdc:mga07m45_84214_c1_293_1072 246
100 3300053739 Ga0500587_001828 Ga0500587_001828_602_1381 246
101 3300003759 Ga0055525_1000036 Ga0055525_1000036155 247
102 3300005367 Ga0070667_100005441 Ga0070667_1000054419 247
103 3300005367 Ga0070667_100146005 Ga0070667_1001460052 247
104 3300006353 Ga0075370_10052819 Ga0075370_100528192 247
105 3300006881 Ga0068865_100083610 Ga0068865_1000836102 247
106 3300025230 Ga0209563_100014 Ga0209563_100014540 247
107 3300025938 Ga0207704_10081310 Ga0207704_100813102 247
108 3300025986 Ga0207658_10004663 Ga0207658_100046635 247
109 3300028786 Ga0307517_10001027 Ga0307517_1000102715 247
110 3300028786 Ga0307517_10064707 Ga0307517_100647072 247
111 3300030521 Ga0307511_10102946 Ga0307511_101029462 247
112 3300030522 Ga0307512_10195779 Ga0307512_101957792 247
113 3300031507 Ga0307509_10000993 Ga0307509_1000099315 247
114 3300031507 Ga0307509_10010193 Ga0307509_100101933 247
115 3300031507 Ga0307509_10067676 Ga0307509_100676762 247
116 3300031507 Ga0307509_10104981 Ga0307509_101049812 247
117 3300031616 Ga0307508_10000539 Ga0307508_1000053910 247
118 3300031616 Ga0307508_10002735 Ga0307508_1000273513 247
119 3300031616 Ga0307508_10093297 Ga0307508_100932972 247
120 3300031649 Ga0307514_10161992 Ga0307514_101619922 247
121 3300031824 Ga0307413_10208008 Ga0307413_102080082 247
122 3300033180 Ga0307510_10009594 Ga0307510_1000959411 247
123 3300033180 Ga0307510_10104490 Ga0307510_101044903 247
124 3300033180 Ga0307510_10159909 Ga0307510_101599092 247
125 3300037068 Ga0373925_0021961 Ga0373925_0021961_2773_3573 247
126 3300037068 Ga0373925_0209723 Ga0373925_0209723_602_1399 247
127 3300044712 Ga0453684_0022762 Ga0453684_0022762_538_1302 247
128 3300046454 Ga0495592_0004068 Ga0495592_0004068_9636_10430 247
129 3300046460 Ga0495638_0071865 Ga0495638_0071865_274_1068 247
130 3300046516 Ga0495628_0351818 Ga0495628_0351818_50_847 247
131 3300046535 Ga0495586_0337751 Ga0495586_0337751_42_839 247
132 3300046683 Ga0495658_0140259 Ga0495658_0140259_454_1260 247
133 3300047472 Ga0495686_0002515 Ga0495686_0002515_5589_6377 247
134 3300048088 Ga0495602_0174333 Ga0495602_0174333_636_1430 247
135 3300049460 Ga0495682_0091442 Ga0495682_0091442_94_894 247
136 3300050496 nmdc:mga07m45_8021_c1 nmdc:mga07m45_8021_c1_3913_4707 247
137 3300053077 Ga0495601_0152096 Ga0495601_0152096_421_1218 247
138 3300053088 Ga0500644_0001115 Ga0500644_0001115_6995_7789 247
139 3300053093 Ga0500651_0016127 Ga0500651_0016127_377_1171 247
140 3300053093 Ga0500651_0113876 Ga0500651_0113876_471_1265 247
141 3300053118 Ga0500594_0002533 Ga0500594_0002533_869_1663 247
142 3300053133 Ga0500655_003404 Ga0500655_003404_1907_2701 247
143 3300053136 Ga0500559_0000047 Ga0500559_0000047_15690_16484 247
144 3300053138 Ga0500564_125741 Ga0500564_125741_197_991 247
145 3300053148 Ga0500590_002188 Ga0500590_002188_1357_2154 247
146 3300053154 Ga0500619_041876 Ga0500619_041876_81_875 247
147 3300053156 Ga0500622_0001747 Ga0500622_0001747_15721_16515 247
148 3300053177 Ga0500636_0046390 Ga0500636_0046390_1571_2365 247
149 iso_pu_bacteria 2585428057 2587729860 247
150 iso_pu_bacteria 2588253510 2588294501 247
151 3300005618 Ga0068864_100037464 Ga0068864_1000374643 248
152 3300006195 Ga0075366_10064869 Ga0075366_100648692 248
153 3300009177 Ga0105248_10013324 Ga0105248_100133245 248
154 3300012512 Ga0157327_1007943 Ga0157327_10079431 248
155 3300026088 Ga0207641_10800436 Ga0207641_108004361 248
156 3300026095 Ga0207676_10066674 Ga0207676_100666742 248
157 3300028794 Ga0307515_10068990 Ga0307515_100689906 248
158 3300048907 Ga0496104_0173276 Ga0496104_0173276_301_1089 248
159 3300048908 Ga0496105_0236563 Ga0496105_0236563_509_1297 248
160 3300048911 Ga0496108_0133121 Ga0496108_0133121_806_1594 248
161 3300048915 Ga0496112_0024543 Ga0496112_0024543_4191_4979 248
162 3300053086 Ga0500578_0115709 Ga0500578_0115709_769_1587 248
163 3300053730 Ga0500645_001983 Ga0500645_001983_2651_3469 248
164 3300005331 Ga0070670_100164899 Ga0070670_1001648992 249
165 3300005354 Ga0070675_100015765 Ga0070675_1000157652 249
166 3300005364 Ga0070673_100230994 Ga0070673_1002309942 249
167 3300005365 Ga0070688_100249565 Ga0070688_1002495652 249
168 3300005457 Ga0070662_100041560 Ga0070662_1000415604 249
169 3300005564 Ga0070664_100142874 Ga0070664_1001428742 249
170 3300005616 Ga0068852_100412522 Ga0068852_1004125222 249
171 3300006353 Ga0075370_10004837 Ga0075370_100048372 249
172 3300025933 Ga0207706_10074055 Ga0207706_100740552 249
173 3300025940 Ga0207691_10042218 Ga0207691_100422182 249
174 3300025945 Ga0207679_10276835 Ga0207679_102768351 249
175 3300025960 Ga0207651_10162732 Ga0207651_101627322 249
176 3300026142 Ga0207698_10318688 Ga0207698_103186882 249
177 3300028381 Ga0268264_10020036 Ga0268264_100200364 249
178 3300031730 Ga0307516_10001017 Ga0307516_1000101717 249
179 3300033180 Ga0307510_10000129 Ga0307510_1000012916 249
180 3300037471 Ga0395905_0084397 Ga0395905_0084397_20_823 249
181 3300037471 Ga0395905_0153453 Ga0395905_0153453_1219_2031 249
182 3300050496 nmdc:mga07m45_1564_c1 nmdc:mga07m45_1564_c1_3514_4317 249
183 3300053091 Ga0500647_0087518 Ga0500647_0087518_601_1410 249
184 3300013297 Ga0157378_10152520 Ga0157378_101525202 250
185 3300002774 JGI25150J39212_1011064 JGI25150J39212_10110642 251
186 3300003215 JGI25153J46596_10000413 JGI25153J46596_1000041320 251
187 3300003322 rootL2_10030316 rootL2_100303162 251
188 3300005455 Ga0070663_100004366 Ga0070663_1000043662 251
189 3300005455 Ga0070663_100053062 Ga0070663_1000530622 251
190 3300005459 Ga0068867_100000004 Ga0068867_100000004126 251
191 3300005467 Ga0070706_100001745 Ga0070706_10000174517 251
192 3300005577 Ga0068857_100220876 Ga0068857_1002208762 251
193 3300005614 Ga0068856_100158991 Ga0068856_1001589912 251
194 3300006038 Ga0075365_10041803 Ga0075365_100418032 251
195 3300006042 Ga0075368_10037103 Ga0075368_100371032 251
196 3300006042 Ga0075368_10067022 Ga0075368_100670222 251
197 3300006042 Ga0075368_10080595 Ga0075368_100805952 251
198 3300006048 Ga0075363_100019016 Ga0075363_1000190162 251
199 3300006048 Ga0075363_100021838 Ga0075363_1000218381 251
200 3300006048 Ga0075363_100072303 Ga0075363_1000723032 251
201 3300006177 Ga0075362_10004451 Ga0075362_100044514 251
202 3300006177 Ga0075362_10012085 Ga0075362_100120852 251
203 3300006177 Ga0075362_10018656 Ga0075362_100186562 251
204 3300006178 Ga0075367_10211943 Ga0075367_102119432 251
205 3300006178 Ga0075367_10216515 Ga0075367_102165152 251
206 3300006195 Ga0075366_10000870 Ga0075366_1000087011 251
207 3300006195 Ga0075366_10004387 Ga0075366_100043875 251
208 3300006195 Ga0075366_10015085 Ga0075366_100150852 251
209 3300006195 Ga0075366_10031545 Ga0075366_100315452 251
210 3300006195 Ga0075366_10128517 Ga0075366_101285172 251
211 3300006195 Ga0075366_10185961 Ga0075366_101859612 251
212 3300006353 Ga0075370_10000638 Ga0075370_100006384 251
213 3300006353 Ga0075370_10001028 Ga0075370_100010289 251
214 3300006353 Ga0075370_10001503 Ga0075370_100015038 251
215 3300006353 Ga0075370_10008598 Ga0075370_100085984 251
216 3300009093 Ga0105240_10039041 Ga0105240_100390416 251
217 3300009148 Ga0105243_10000569 Ga0105243_1000056915 251
218 3300014745 Ga0157377_10000010 Ga0157377_10000010187 251
219 3300025297 Ga0209758_1000177 Ga0209758_100017755 251
220 3300025298 Ga0209050_1000975 Ga0209050_100097514 251
221 3300025299 Ga0209256_1064857 Ga0209256_10648571 251
222 3300025910 Ga0207684_10010010 Ga0207684_100100106 251
223 3300025922 Ga0207646_10310717 Ga0207646_103107172 251
224 3300025933 Ga0207706_10007785 Ga0207706_1000778510 251
225 3300025935 Ga0207709_10001632 Ga0207709_100016328 251
226 3300025942 Ga0207689_10029351 Ga0207689_100293512 251
227 3300026041 Ga0207639_10135169 Ga0207639_101351692 251
228 3300026067 Ga0207678_10001341 Ga0207678_1000134112 251
229 3300026078 Ga0207702_10128263 Ga0207702_101282632 251
230 3300026089 Ga0207648_10000002 Ga0207648_10000002124 251
231 3300026089 Ga0207648_10008024 Ga0207648_1000802412 251
232 3300026116 Ga0207674_10067421 Ga0207674_100674212 251
233 3300026142 Ga0207698_10099327 Ga0207698_100993272 251
234 3300027866 Ga0209813_10019003 Ga0209813_100190032 251
235 3300028786 Ga0307517_10147451 Ga0307517_101474512 251
236 3300030522 Ga0307512_10094542 Ga0307512_100945422 251
237 3300031456 Ga0307513_10091310 Ga0307513_100913102 251
238 3300031616 Ga0307508_10217433 Ga0307508_102174332 251
239 3300046506 Ga0495583_0025859 Ga0495583_0025859_264_1109 251
240 3300046519 Ga0495632_0016449 Ga0495632_0016449_1909_2754 251
241 3300046660 Ga0495625_0026508 Ga0495625_0026508_1452_2288 251
242 3300046694 Ga0495649_0001790 Ga0495649_0001790_11248_12093 251
243 3300047443 Ga0495687_001215 Ga0495687_001215_9293_10126 251
244 3300047443 Ga0495687_035848 Ga0495687_035848_1152_1997 251
245 3300048091 Ga0495626_0045038 Ga0495626_0045038_1008_1853 251
246 3300049460 Ga0495682_0072124 Ga0495682_0072124_84_929 251
247 3300050490 nmdc:mga03n38_149808_c1 nmdc:mga03n38_149808_c1_277_1155 251
248 3300050490 nmdc:mga03n38_3672_c1 nmdc:mga03n38_3672_c1_1740_2573 251
249 3300050490 nmdc:mga03n38_46766_c1 nmdc:mga03n38_46766_c1_511_1344 251
250 3300050491 nmdc:mga00v17_10121_c1 nmdc:mga00v17_10121_c1_2018_2851 251
251 3300050493 nmdc:mga0k408_223_c2 nmdc:mga0k408_223_c2_19860_20690 251
252 3300050493 nmdc:mga0k408_298461_c1 nmdc:mga0k408_298461_c1_59_889 251
253 3300050493 nmdc:mga0k408_30298_c1 nmdc:mga0k408_30298_c1_304_1128 251
254 3300050493 nmdc:mga0k408_4757_c1 nmdc:mga0k408_4757_c1_2517_3350 251
255 3300050493 nmdc:mga0k408_87273_c1 nmdc:mga0k408_87273_c1_58_888 251
256 3300050494 nmdc:mga06z11_103282_c1 nmdc:mga06z11_103282_c1_197_1027 251
257 3300050494 nmdc:mga06z11_16306_c1 nmdc:mga06z11_16306_c1_1331_2164 251
258 3300050494 nmdc:mga06z11_258102_c1 nmdc:mga06z11_258102_c1_82_960 251
259 3300050494 nmdc:mga06z11_42027_c1 nmdc:mga06z11_42027_c1_844_1677 251
260 3300050495 nmdc:mga04h51_7178_c1 nmdc:mga04h51_7178_c1_680_1513 251
261 3300050496 nmdc:mga07m45_1355_c1 nmdc:mga07m45_1355_c1_8244_9086 251
262 3300050496 nmdc:mga07m45_183_c1 nmdc:mga07m45_183_c1_22360_23184 251
263 3300050496 nmdc:mga07m45_3354_c1 nmdc:mga07m45_3354_c1_5020_5850 251
264 3300050496 nmdc:mga07m45_9596_c1 nmdc:mga07m45_9596_c1_1893_2726 251
265 3300053134 Ga0500658_0009086 Ga0500658_0009086_2805_3650 251
266 3300053151 Ga0500604_0016873 Ga0500604_0016873_643_1422 251

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

40

184

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4yer-assembly1.cif.gz_A crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9286 2 226
4yer-assembly1.cif.gz_B crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9149 2 225
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.8985 2 236
8f5b-assembly1.cif.gz_A human abca4 structure in complex with amp-pnp 0.8982 2 225
7lkp-assembly1.cif.gz_A structure of atp-free human abca4 0.8968 2 227
ID Description Score Start End Superfamily
af_A1ZBS3_1241_1472_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9408 1 225 3.40.50.300
af_Q9VDR4_479_718_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9323 2 223 3.40.50.300
af_P36879_1_236_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.931 2 225 3.40.50.300
af_Q9XW49_1237_1482_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9263 2 225 3.40.50.300
af_Q58429_1_224_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9252 2 221 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A318JKJ8-F1-model_v4 Sodium transport system ATP-binding protein 0.9575 1 240 GO:0005524
GO:0005886
GO:0016887
AF-A0A3B9FTI4-F1-model_v4 Export ABC transporter ATP-binding protein 0.9545 1 225 GO:0005524
GO:0016887
AF-A0A7C6SZZ9-F1-model_v4 ABC transporter ATP-binding protein 0.9501 2 227 GO:0005524
GO:0016887
AF-A0A7Y5JGK1-F1-model_v4 ABC transporter ATP-binding protein 0.9494 1 227 GO:0005524
GO:0016887
AF-A0A496Q1R8-F1-model_v4 ABC transporter ATP-binding protein 0.9479 2 226 GO:0005524
GO:0016887

Feature Viewer

pLDDT pTM Quality
90.37 0.86 High
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Predicted Structure (AlphaFold2)

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