F373891

General Info

Members Datasets Scaffolds Average Seq Length
266 161 532 391

Family's Representative Sequence

Representative Sequence 3300005444|Ga0070694_100008178|Ga0070694_1000081784
Length 454
Sequence MCAVNVASDGGFSCADRGTPLPFGPSSTLGKFVEPLAVARPGTRGAADRSAGHSRAVDLSLTHAQLELRARARAYVVDVLQPLEVAFERAGGRLPAETRDQLKRAAIAAGIHGGSFPRELGGQGWTVLEQVIVHEQLGQATGGLWSFIPGAYNALIHADADQRRRYLEPSLRGERFGGYAITEPNAGSDARTLEARAVRDPSTGDYVLNGEKWFVTGPPDETDFMIFHCLVGGDDAGPGGREAQPTLFLVDYDLPGVTMKHDPDYTHTFADRHPQFVLEDVRVPASAILGGIGRADELTNEWFVEERIHIGARCAGAMERLLTLGVEWATNRVQFGQRIYDFQGVSFPLADSAADAAAARLLTREAAALADAGADPKVVHAKASLAKLFASEAAWRCADRVVQVFGGRGYMREFPAERYLRELRVDRIWEGTSEIQRLIVARALEKRGVERVVG

Samples

Sample ID Description Type Environment
1 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
90 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
91 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
94 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
95 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
96 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
97 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
98 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
99 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
100 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
101 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
102 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
105 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
111 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
112 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
113 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
116 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
123 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
129 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
138 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
147 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
150 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
151 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
154 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
157 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
158 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
159 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.88
Nodule 0
Rhizoplane 13.53
Rhizosphere 84.21
Stem 0
Stem Tuber 0
Unclassified 1.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070694_100008178 3300005444 Bacteria 6390
2 Ga0070683_100020279 3300005329 Bacteria 5915
3 Ga0070683_100181785 3300005329 Bacteria 1996
4 Ga0070690_100023817 3300005330 Bacteria 3760
5 Ga0068869_100174531 3300005334 Bacteria 1681
6 Ga0070680_100000127 3300005336 Bacteria 45220
7 Ga0070682_100070264 3300005337 Bacteria 2238
8 Ga0068868_100158968 3300005338 Bacteria 1865
9 Ga0070660_100058290 3300005339 Bacteria 2993
10 Ga0070689_100139880 3300005340 Bacteria 1946
11 Ga0070692_10000522 3300005345 Bacteria 11882
12 Ga0070668_100059638 3300005347 Bacteria 2953
13 Ga0070675_100044475 3300005354 Bacteria 3631
14 Ga0070659_100003729 3300005366 Bacteria 10871
15 Ga0070659_100117305 3300005366 Bacteria 2153
16 Ga0070705_100067021 3300005440 Bacteria 2155
17 Ga0070705_100093198 3300005440 Bacteria 1882
18 Ga0070700_100003246 3300005441 Bacteria 8368
19 Ga0070700_100021136 3300005441 Bacteria 3780
20 Ga0070694_100003458 3300005444 Bacteria 9459
21 Ga0070708_100005286 3300005445 Bacteria 10227
22 Ga0070708_100104228 3300005445 Bacteria 2601
23 Ga0070663_100153988 3300005455 Bacteria 1765
24 Ga0070662_100085913 3300005457 Bacteria 2352
25 Ga0070706_100000262 3300005467 Bacteria 63811
26 Ga0070706_100007230 3300005467 Bacteria 10433
27 Ga0070706_100076635 3300005467 Unclassified 3095
28 Ga0070706_100089871 3300005467 Bacteria 2848
29 Ga0070706_100097582 3300005467 Bacteria 2729
30 Ga0070706_100191235 3300005467 Bacteria 1912
31 Ga0070706_100193962 3300005467 Bacteria 1898
32 Ga0070706_100272206 3300005467 Bacteria 1580
33 Ga0070707_100000698 3300005468 Bacteria 33367
34 Ga0070707_100010896 3300005468 Bacteria 8466
35 Ga0070707_100012197 3300005468 Bacteria 8021
36 Ga0070698_100120764 3300005471 Bacteria 2581
37 Ga0070698_100159643 3300005471 Bacteria 2199
38 Ga0070698_100258800 3300005471 Bacteria 1673
39 Ga0070699_100001081 3300005518 Bacteria 25370
40 Ga0070699_100039902 3300005518 Bacteria 4066
41 Ga0070699_100079919 3300005518 Bacteria 2849
42 Ga0070679_100182316 3300005530 Unclassified 2072
43 Ga0070684_100030284 3300005535 Bacteria 4596
44 Ga0070697_100135244 3300005536 Bacteria 2069
45 Ga0068853_100027757 3300005539 Bacteria 4757
46 Ga0070686_100018526 3300005544 Bacteria 4089
47 Ga0070686_100153427 3300005544 Bacteria 1615
48 Ga0070695_100013239 3300005545 Bacteria 4955
49 Ga0070695_100040240 3300005545 Bacteria 2958
50 Ga0070695_100087035 3300005545 Bacteria 2078
51 Ga0070693_100100396 3300005547 Bacteria 1762
52 Ga0070704_100052119 3300005549 Bacteria 2885
53 Ga0070704_100169033 3300005549 Unclassified 1737
54 Ga0070664_100116386 3300005564 Bacteria 2337
55 Ga0068857_100260743 3300005577 Bacteria 1591
56 Ga0068854_100022897 3300005578 Bacteria 4262
57 Ga0068852_100041407 3300005616 Bacteria 3893
58 Ga0068861_100080323 3300005719 Bacteria 2551
59 Ga0068862_100064562 3300005844 Bacteria 3152
60 Ga0081539_10002796 3300005985 Bacteria 23393
61 Ga0075365_10009134 3300006038 Bacteria 5678
62 Ga0075363_100004768 3300006048 Bacteria 5978
63 Ga0075364_10038001 3300006051 Bacteria 3119
64 Ga0075364_10192404 3300006051 Bacteria 1382
65 Ga0070712_100248168 3300006175 Bacteria 1421
66 Ga0075428_100000172 3300006844 Bacteria 60193
67 Ga0075433_10015746 3300006852 Bacteria 6213
68 Ga0075433_10076955 3300006852 Bacteria 2939
69 Ga0075433_10197187 3300006852 Bacteria 1791
70 Ga0075435_100081401 3300007076 Bacteria 2660
71 Ga0111539_10209128 3300009094 Bacteria 2273
72 Ga0105245_10180125 3300009098 Bacteria 2018
73 Ga0105245_10462380 3300009098 Bacteria 1279
74 Ga0114129_10003058 3300009147 Bacteria 23460
75 Ga0114129_10031413 3300009147 Bacteria 7506
76 Ga0114129_10263244 3300009147 Bacteria 2310
77 Ga0114129_10455208 3300009147 Bacteria 1678
78 Ga0105243_10052364 3300009148 Bacteria 3233
79 Ga0105243_10150832 3300009148 Bacteria 1994
80 Ga0105249_10121064 3300009553 Bacteria 2487
81 Ga0105249_10134370 3300009553 Bacteria 2365
82 Ga0105239_10065457 3300010375 Bacteria 3992
83 Ga0105239_10137900 3300010375 Bacteria 2716
84 Ga0105239_10429533 3300010375 Bacteria 1497
85 Ga0157374_10113829 3300013296 Bacteria 2604
86 Ga0157378_10048583 3300013297 Bacteria 3773
87 Ga0157372_10274976 3300013307 Bacteria 1958
88 Ga0157372_10564651 3300013307 Bacteria 1326
89 Ga0157375_10432956 3300013308 Bacteria 1481
90 Ga0163163_10034041 3300014325 Bacteria 4932
91 Ga0163163_10251859 3300014325 Bacteria 1816
92 Ga0157380_10288995 3300014326 Bacteria 1504
93 Ga0157380_10356445 3300014326 Bacteria 1371
94 Ga0157377_10016969 3300014745 Bacteria 3757
95 Ga0157379_10007946 3300014968 Bacteria 9199
96 Ga0157376_10210459 3300014969 Bacteria 1795
97 Ga0207688_10035194 3300025901 Bacteria 2774
98 Ga0207684_10000869 3300025910 Bacteria 34532
99 Ga0207684_10008192 3300025910 Bacteria 9311
100 Ga0207684_10139254 3300025910 Bacteria 2085
101 Ga0207684_10167809 3300025910 Bacteria 1892
102 Ga0207684_10199760 3300025910 Bacteria 1725
103 Ga0207660_10000001 3300025917 Bacteria 1034169
104 Ga0207660_10224045 3300025917 Bacteria 1477
105 Ga0207662_10175911 3300025918 Bacteria 1375
106 Ga0207657_10003401 3300025919 Bacteria 17003
107 Ga0207652_10091497 3300025921 Unclassified 2675
108 Ga0207646_10015352 3300025922 Bacteria 7235
109 Ga0207646_10039919 3300025922 Bacteria 4224
110 Ga0207681_10131037 3300025923 Bacteria 1854
111 Ga0207659_10044123 3300025926 Bacteria 3136
112 Ga0207690_10027878 3300025932 Bacteria 3573
113 Ga0207706_10003505 3300025933 Bacteria 14983
114 Ga0207706_10148175 3300025933 Bacteria 2064
115 Ga0207709_10045478 3300025935 Bacteria 2659
116 Ga0207691_10173573 3300025940 Bacteria 1886
117 Ga0207689_10186031 3300025942 Bacteria 1713
118 Ga0207661_10108189 3300025944 Bacteria 2346
119 Ga0207651_10187179 3300025960 Bacteria 1648
120 Ga0207712_10091149 3300025961 Bacteria 2245
121 Ga0207668_10011589 3300025972 Bacteria 5364
122 Ga0207658_10167025 3300025986 Bacteria 1809
123 Ga0207703_10174102 3300026035 Bacteria 1895
124 Ga0207639_10029827 3300026041 Bacteria 3998
125 Ga0207678_10008578 3300026067 Bacteria 9005
126 Ga0207708_10005979 3300026075 Bacteria 9012
127 Ga0207648_10042124 3300026089 Bacteria 4008
128 Ga0207674_10039690 3300026116 Bacteria 4880
129 Ga0207674_10169229 3300026116 Bacteria 2139
130 Ga0207674_10359178 3300026116 Bacteria 1408
131 Ga0207675_100146816 3300026118 Bacteria 2243
132 Ga0207698_10131966 3300026142 Bacteria 2136
133 Ga0268265_10167920 3300028380 Bacteria 1872
134 Ga0268264_10065677 3300028381 Bacteria 3058
135 Ga0265319_1022111 3300028563 Bacteria 2323
136 Ga0265318_10015334 3300028577 Bacteria 3191
137 Ga0265322_10035863 3300028654 Bacteria 1413
138 Ga0265338_10202589 3300028800 Bacteria 1495
139 Ga0265324_10003003 3300029957 Bacteria 8247
140 Ga0265332_10003604 3300031238 Bacteria 7430
141 Ga0265320_10016243 3300031240 Bacteria 4177
142 Ga0265340_10034497 3300031247 Bacteria 2516
143 Ga0265339_10036440 3300031249 Bacteria 2753
144 Ga0265316_10047246 3300031344 Bacteria 3406
145 Ga0265314_10007007 3300031711 Bacteria 9852
146 Ga0316578_10112705 3300031728 Bacteria 1634
147 Ga0316574_0128596 3300035398 Bacteria 1629
148 Ga0373931_0105879 3300035691 Bacteria 1589
149 Ga0373937_0044077 3300036401 Bacteria 4074
150 Ga0316582_0027549 3300036647 Bacteria 3434
151 Ga0373925_0196365 3300037068 Bacteria 1603
152 Ga0395899_0151499 3300037312 Bacteria 1643
153 Ga0395905_0054799 3300037471 Bacteria 3731
154 Ga0395905_0203914 3300037471 Bacteria 1854
155 Ga0395901_0017903 3300038443 Bacteria 7231
156 Ga0436365_1370628 3300039437 Bacteria 1938
157 Ga0450910_007558 3300042147 Bacteria 1516
158 Ga0495651_0105261 3300046462 Bacteria 2093
159 Ga0495582_0119426 3300046473 Bacteria 1485
160 Ga0495581_0126445 3300047315 Bacteria 1489
161 Ga0495674_0195856 3300047319 Bacteria 1678
162 Ga0496100_0015990 3300048903 Bacteria 4395
163 Ga0496101_0054210 3300048904 Bacteria 2895
164 Ga0496101_0141221 3300048904 Bacteria 1836
165 Ga0496101_0160337 3300048904 Bacteria 1724
166 Ga0496102_0009183 3300048905 Bacteria 8482
167 Ga0496102_0127067 3300048905 Bacteria 2384
168 Ga0496102_0179306 3300048905 Bacteria 1996
169 Ga0496103_0007459 3300048906 Bacteria 6520
170 Ga0496104_0005176 3300048907 Bacteria 11396
171 Ga0496104_0120250 3300048907 Bacteria 2522
172 Ga0496104_0125000 3300048907 Bacteria 2469
173 Ga0496105_0026481 3300048908 Bacteria 4730
174 Ga0496106_0047337 3300048909 Bacteria 3236
175 Ga0496106_0095990 3300048909 Bacteria 2294
176 Ga0496107_0080615 3300048910 Bacteria 2374
177 Ga0496107_0126775 3300048910 Bacteria 1883
178 Ga0496107_0224480 3300048910 Bacteria 1398
179 Ga0496108_0008906 3300048911 Bacteria 8135
180 Ga0496108_0024269 3300048911 Bacteria 4992
181 Ga0496108_0081861 3300048911 Bacteria 2736
182 Ga0496109_0037094 3300048912 Bacteria 4403
183 Ga0496109_0047195 3300048912 Bacteria 3915
184 Ga0496109_0081254 3300048912 Bacteria 2986
185 Ga0496110_0023935 3300048913 Bacteria 5200
186 Ga0496110_0030988 3300048913 Bacteria 4612
187 Ga0496110_0109224 3300048913 Bacteria 2484
188 Ga0496111_0010946 3300048914 Bacteria 6102
189 Ga0496111_0027085 3300048914 Bacteria 4052
190 Ga0496112_0031326 3300048915 Bacteria 5158
191 Ga0496113_0042553 3300048916 Bacteria 3357
192 Ga0496113_0060810 3300048916 Bacteria 2849
193 Ga0496113_0150003 3300048916 Bacteria 1839
194 Ga0496114_0002239 3300048917 Bacteria 14735
195 Ga0496114_0224668 3300048917 Bacteria 1649
196 Ga0496114_0247034 3300048917 Bacteria 1570
197 Ga0496114_0332018 3300048917 Bacteria 1344
198 Ga0501036_0037587 3300049572 Bacteria 4095
199 Ga0501036_0098103 3300049572 Bacteria 2477
200 Ga0501039_0127448 3300049575 Bacteria 1997
201 Ga0501040_0016280 3300049576 Bacteria 4919
202 Ga0501040_0094952 3300049576 Bacteria 2075
203 Ga0501040_0116630 3300049576 Bacteria 1871
204 Ga0501041_0036116 3300049577 Bacteria 2995
205 Ga0501041_0081331 3300049577 Bacteria 1995
206 Ga0501041_0149623 3300049577 Bacteria 1457
207 Ga0501042_0073735 3300049578 Bacteria 2441
208 Ga0501042_0077304 3300049578 Bacteria 2383
209 Ga0501042_0136464 3300049578 Bacteria 1769
210 Ga0501046_0051604 3300049580 Bacteria 3245
211 Ga0501046_0236663 3300049580 Bacteria 1348
212 Ga0501048_0042504 3300049582 Bacteria 3254
213 Ga0501048_0125091 3300049582 Bacteria 1818
214 Ga0501048_0188530 3300049582 Bacteria 1461
215 Ga0501067_0043990 3300049583 Bacteria 2481
216 Ga0501068_0021864 3300049584 Bacteria 3738
217 Ga0501071_0036992 3300049587 Bacteria 3483
218 Ga0501071_0102605 3300049587 Bacteria 2109
219 Ga0501071_0118525 3300049587 Bacteria 1961
220 Ga0501073_0105238 3300049589 Bacteria 1958
221 Ga0501074_0049364 3300049590 Bacteria 3038
222 Ga0501075_0144739 3300049591 Bacteria 1811
223 Ga0501075_0146838 3300049591 Bacteria 1797
224 Ga0501075_0201609 3300049591 Bacteria 1517
225 Ga0501076_0030708 3300049592 Bacteria 4186
226 Ga0501076_0044388 3300049592 Bacteria 3506
227 Ga0501076_0270838 3300049592 Bacteria 1390
228 Ga0501079_0018219 3300049741 Bacteria 5363
229 Ga0501079_0041072 3300049741 Bacteria 3570
230 Ga0501079_0123010 3300049741 Bacteria 2018
231 Ga0501080_0145809 3300049742 Bacteria 2188
232 Ga0501081_0046031 3300049743 Bacteria 2997
233 Ga0501081_0054795 3300049743 Bacteria 2755
234 Ga0501081_0103711 3300049743 Bacteria 2012
235 Ga0501083_0169358 3300049744 Bacteria 1428
236 Ga0501035_0057622 3300049822 Bacteria 3463
237 Ga0501045_0003298 3300049824 Bacteria 11025
238 Ga0501045_0040154 3300049824 Bacteria 3406
239 Ga0501045_0044687 3300049824 Bacteria 3227
240 Ga0501045_0059718 3300049824 Bacteria 2794
241 Ga0501045_0158298 3300049824 Bacteria 1685
242 nmdc:mga00v17_50302_c1 3300050491 Bacteria 2531
243 nmdc:mga05p37_13235_c1 3300050507 Bacteria 9877
244 nmdc:mga05p37_222281_c1 3300050507 Bacteria 2278
245 nmdc:mga05p37_257620_c1 3300050507 Bacteria 2090
246 nmdc:mga08y16_176023_c1 3300050511 Bacteria 2221
247 nmdc:mga0n895_285916_c1 3300050512 Bacteria 1672
248 nmdc:mga0n895_45469_c1 3300050512 Bacteria 3936
249 nmdc:mga0rr50_121509_c1 3300050513 Bacteria 2079
250 nmdc:mga0rr50_162289_c1 3300050513 Bacteria 1815
251 nmdc:mga0a205_153151_c1 3300050515 Bacteria 2204
252 nmdc:mga0a205_43632_c1 3300050515 Bacteria 4323
253 Ga0495612_0000794 3300053078 Bacteria 12834
254 Ga0495619_0100410 3300053085 Bacteria 1969
255 Ga0501084_0027693 3300054114 Bacteria 4735
256 Ga0501084_0253756 3300054114 Bacteria 1485
257 Ga0501084_0300345 3300054114 Bacteria 1356
258 Ga0590074_002282 3300059423 Bacteria 3150
259 Ga0501082_0026838 3300060353 Bacteria 4963
260 Ga0501082_0067153 3300060353 Bacteria 3088
261 Ga0501082_0121067 3300060353 Bacteria 2268
262 Ga0501082_0155567 3300060353 Bacteria 1986
263 Ga0530510_0004815 3300061734 Bacteria 9338
264 Ga0530510_0062741 3300061734 Bacteria 2690
265 Ga0530510_0073594 3300061734 Bacteria 2480
266 Ga0530510_0105491 3300061734 Bacteria 2062
267 Ga0070694_100008178
268 Ga0070683_100020279
269 Ga0070683_100181785
270 Ga0070690_100023817
271 Ga0068869_100174531
272 Ga0070680_100000127
273 Ga0070682_100070264
274 Ga0068868_100158968
275 Ga0070660_100058290
276 Ga0070689_100139880
277 Ga0070692_10000522
278 Ga0070668_100059638
279 Ga0070675_100044475
280 Ga0070659_100003729
281 Ga0070659_100117305
282 Ga0070705_100067021
283 Ga0070705_100093198
284 Ga0070700_100003246
285 Ga0070700_100021136
286 Ga0070694_100003458
287 Ga0070708_100005286
288 Ga0070708_100104228
289 Ga0070663_100153988
290 Ga0070662_100085913
291 Ga0070706_100000262
292 Ga0070706_100007230
293 Ga0070706_100076635
294 Ga0070706_100089871
295 Ga0070706_100097582
296 Ga0070706_100191235
297 Ga0070706_100193962
298 Ga0070706_100272206
299 Ga0070707_100000698
300 Ga0070707_100010896
301 Ga0070707_100012197
302 Ga0070698_100120764
303 Ga0070698_100159643
304 Ga0070698_100258800
305 Ga0070699_100001081
306 Ga0070699_100039902
307 Ga0070699_100079919
308 Ga0070679_100182316
309 Ga0070684_100030284
310 Ga0070697_100135244
311 Ga0068853_100027757
312 Ga0070686_100018526
313 Ga0070686_100153427
314 Ga0070695_100013239
315 Ga0070695_100040240
316 Ga0070695_100087035
317 Ga0070693_100100396
318 Ga0070704_100052119
319 Ga0070704_100169033
320 Ga0070664_100116386
321 Ga0068857_100260743
322 Ga0068854_100022897
323 Ga0068852_100041407
324 Ga0068861_100080323
325 Ga0068862_100064562
326 Ga0081539_10002796
327 Ga0075365_10009134
328 Ga0075363_100004768
329 Ga0075364_10038001
330 Ga0075364_10192404
331 Ga0070712_100248168
332 Ga0075428_100000172
333 Ga0075433_10015746
334 Ga0075433_10076955
335 Ga0075433_10197187
336 Ga0075435_100081401
337 Ga0111539_10209128
338 Ga0105245_10180125
339 Ga0105245_10462380
340 Ga0114129_10003058
341 Ga0114129_10031413
342 Ga0114129_10263244
343 Ga0114129_10455208
344 Ga0105243_10052364
345 Ga0105243_10150832
346 Ga0105249_10121064
347 Ga0105249_10134370
348 Ga0105239_10065457
349 Ga0105239_10137900
350 Ga0105239_10429533
351 Ga0157374_10113829
352 Ga0157378_10048583
353 Ga0157372_10274976
354 Ga0157372_10564651
355 Ga0157375_10432956
356 Ga0163163_10034041
357 Ga0163163_10251859
358 Ga0157380_10288995
359 Ga0157380_10356445
360 Ga0157377_10016969
361 Ga0157379_10007946
362 Ga0157376_10210459
363 Ga0207688_10035194
364 Ga0207684_10000869
365 Ga0207684_10008192
366 Ga0207684_10139254
367 Ga0207684_10167809
368 Ga0207684_10199760
369 Ga0207660_10000001
370 Ga0207660_10224045
371 Ga0207662_10175911
372 Ga0207657_10003401
373 Ga0207652_10091497
374 Ga0207646_10015352
375 Ga0207646_10039919
376 Ga0207681_10131037
377 Ga0207659_10044123
378 Ga0207690_10027878
379 Ga0207706_10003505
380 Ga0207706_10148175
381 Ga0207709_10045478
382 Ga0207691_10173573
383 Ga0207689_10186031
384 Ga0207661_10108189
385 Ga0207651_10187179
386 Ga0207712_10091149
387 Ga0207668_10011589
388 Ga0207658_10167025
389 Ga0207703_10174102
390 Ga0207639_10029827
391 Ga0207678_10008578
392 Ga0207708_10005979
393 Ga0207648_10042124
394 Ga0207674_10039690
395 Ga0207674_10169229
396 Ga0207674_10359178
397 Ga0207675_100146816
398 Ga0207698_10131966
399 Ga0268265_10167920
400 Ga0268264_10065677
401 Ga0265319_1022111
402 Ga0265318_10015334
403 Ga0265322_10035863
404 Ga0265338_10202589
405 Ga0265324_10003003
406 Ga0265332_10003604
407 Ga0265320_10016243
408 Ga0265340_10034497
409 Ga0265339_10036440
410 Ga0265316_10047246
411 Ga0265314_10007007
412 Ga0316578_10112705
413 Ga0316574_0128596
414 Ga0373931_0105879
415 Ga0373937_0044077
416 Ga0316582_0027549
417 Ga0373925_0196365
418 Ga0395899_0151499
419 Ga0395905_0054799
420 Ga0395905_0203914
421 Ga0395901_0017903
422 Ga0436365_1370628
423 Ga0450910_007558
424 Ga0495651_0105261
425 Ga0495582_0119426
426 Ga0495581_0126445
427 Ga0495674_0195856
428 Ga0496100_0015990
429 Ga0496101_0054210
430 Ga0496101_0141221
431 Ga0496101_0160337
432 Ga0496102_0009183
433 Ga0496102_0127067
434 Ga0496102_0179306
435 Ga0496103_0007459
436 Ga0496104_0005176
437 Ga0496104_0120250
438 Ga0496104_0125000
439 Ga0496105_0026481
440 Ga0496106_0047337
441 Ga0496106_0095990
442 Ga0496107_0080615
443 Ga0496107_0126775
444 Ga0496107_0224480
445 Ga0496108_0008906
446 Ga0496108_0024269
447 Ga0496108_0081861
448 Ga0496109_0037094
449 Ga0496109_0047195
450 Ga0496109_0081254
451 Ga0496110_0023935
452 Ga0496110_0030988
453 Ga0496110_0109224
454 Ga0496111_0010946
455 Ga0496111_0027085
456 Ga0496112_0031326
457 Ga0496113_0042553
458 Ga0496113_0060810
459 Ga0496113_0150003
460 Ga0496114_0002239
461 Ga0496114_0224668
462 Ga0496114_0247034
463 Ga0496114_0332018
464 Ga0501036_0037587
465 Ga0501036_0098103
466 Ga0501039_0127448
467 Ga0501040_0016280
468 Ga0501040_0094952
469 Ga0501040_0116630
470 Ga0501041_0036116
471 Ga0501041_0081331
472 Ga0501041_0149623
473 Ga0501042_0073735
474 Ga0501042_0077304
475 Ga0501042_0136464
476 Ga0501046_0051604
477 Ga0501046_0236663
478 Ga0501048_0042504
479 Ga0501048_0125091
480 Ga0501048_0188530
481 Ga0501067_0043990
482 Ga0501068_0021864
483 Ga0501071_0036992
484 Ga0501071_0102605
485 Ga0501071_0118525
486 Ga0501073_0105238
487 Ga0501074_0049364
488 Ga0501075_0144739
489 Ga0501075_0146838
490 Ga0501075_0201609
491 Ga0501076_0030708
492 Ga0501076_0044388
493 Ga0501076_0270838
494 Ga0501079_0018219
495 Ga0501079_0041072
496 Ga0501079_0123010
497 Ga0501080_0145809
498 Ga0501081_0046031
499 Ga0501081_0054795
500 Ga0501081_0103711
501 Ga0501083_0169358
502 Ga0501035_0057622
503 Ga0501045_0003298
504 Ga0501045_0040154
505 Ga0501045_0044687
506 Ga0501045_0059718
507 Ga0501045_0158298
508 nmdc:mga00v17_50302_c1
509 nmdc:mga05p37_13235_c1
510 nmdc:mga05p37_222281_c1
511 nmdc:mga05p37_257620_c1
512 nmdc:mga08y16_176023_c1
513 nmdc:mga0n895_285916_c1
514 nmdc:mga0n895_45469_c1
515 nmdc:mga0rr50_121509_c1
516 nmdc:mga0rr50_162289_c1
517 nmdc:mga0a205_153151_c1
518 nmdc:mga0a205_43632_c1
519 Ga0495612_0000794
520 Ga0495619_0100410
521 Ga0501084_0027693
522 Ga0501084_0253756
523 Ga0501084_0300345
524 Ga0590074_002282
525 Ga0501082_0026838
526 Ga0501082_0067153
527 Ga0501082_0121067
528 Ga0501082_0155567
529 Ga0530510_0004815
530 Ga0530510_0062741
531 Ga0530510_0073594
532 Ga0530510_0105491

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

297

445

0.97

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

308

434

0.94

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

62

174

0.85

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

178

281

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fah-assembly1.cif.gz_C molecular basis of the flavin-based electron-bifurcating caffeyl-coa reductase reaction 0.9008 2 380
1rx0-assembly1.cif.gz_C crystal structure of isobutyryl-coa dehydrogenase complexed with substrate/ligand. 0.8981 3 382
4kto-assembly1.cif.gz_A crystal structure of a putative isovaleryl-coa dehydrogenase (psi-nysgrc-012251) from sinorhizobium meliloti 1021 0.8963 1 382
5lnx-assembly2.cif.gz_F crystal structure of mmgc, an acyl-coa dehydrogenase from bacillus subtilis. 0.8933 2 381
5lnx-assembly1.cif.gz_B crystal structure of mmgc, an acyl-coa dehydrogenase from bacillus subtilis. 0.893 6 381
ID Description Score Start End Superfamily
1ukwB03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9212 229 382 1.20.140.10
af_P9WQG3_121_229_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9211 120 224 2.40.110.10
3nf4A03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.92 240 380 1.20.140.10
af_I6Y0W5_249_394_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9186 237 381 1.20.140.10
af_P96397_240_357_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9158 236 354 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A1C6LFH8-F1-model_v4 Acyl-CoA dehydrogenases 0.9402 1 176 GO:0003995
GO:0050660
AF-A0A7V9PYB5-F1-model_v4 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial 0.9299 2 389 GO:0003995
GO:0005737
GO:0033539
GO:0050660
AF-A0A7V9PYB5-F1-model_v4 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial 0.9183 2 389 GO:0003995
GO:0005737
GO:0033539
GO:0050660
AF-A0A850MBP9-F1-model_v4 Acyl-CoA dehydrogenase/oxidase C-terminal domain-containing protein 0.9111 239 382 GO:0003995
AF-A0A382DR47-F1-model_v4 Acyl-CoA dehydrogenase 0.9103 1 242 GO:0003995
GO:0050660

Map