F373691

General Info

Members Datasets Scaffolds Average Seq Length
265 184 175 383

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2582581314|2585311931
Length 459
Sequence ADELTRWLEEGRGFAVATVVAVSGSAPRGPGAALAVDADGTAIGSVSGGCVEGAVYDLCTQALKDGQAVRERFGYSDEDAFAVGLTCGGVLDILVTPLTADAPGRKTFQTALSAATRGEAAALARVIRGPTELLGRPLTVREDGSYDGGLGGRPDLDRAVVDETRSLLQAGRTGTFDIAQDGTHCDPDLTVFVESSVPPARMLVFGAIDFAAALVRVGKFLGYHVTVCDARPVFATRTRFPEADDVVVDWPHRYLHRTRTDDRTVVCVLTHDAKFDVPLLETVLRLPAAYIGAMGSRRTHEDRDRRLREVGLTEAELTRLHSPIGLDLGARTPEETALSIAAEIVAARHGGTGLPLSDSHTPIHHATEERRPAAIGAGGRVTRPRADGQEHRNTLSPVRAGVATSIPTARDQDGAFPGTAEVDLNNEKDRFTINGKPVGFLMGGGRDRDPRLPSCAEGF

Samples

Sample ID Description Type Environment
1 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
2 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
3 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
4 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
5 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
6 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
7 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
8 2643221548 Streptomyces sp. Root55 Isolate Unclassified
9 2643221578 Streptomyces sp. Root63 Isolate Unclassified
10 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
11 2643221647 Streptomyces sp. Root369 Isolate Unclassified
12 2643221670 Streptomyces sp. Root431 Isolate Unclassified
13 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
14 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
15 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
16 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
17 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
18 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
19 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
20 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
21 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
22 2808606448 Streptomyces sp. 193411 Isolate Unclassified
23 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
24 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
25 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
26 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
27 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
28 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
29 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
30 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
31 2862574272 Streptomyces sp. AcE210 Isolate Nodule
32 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
33 2867369537 Streptomyces sp. Z26 Isolate Unclassified
34 2867475112 Streptomyces sp. TM32 Isolate Unclassified
35 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
36 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
37 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
38 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
39 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
40 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
41 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
42 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
43 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
44 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
45 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
46 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
47 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
48 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
49 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
50 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
51 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
52 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
53 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
54 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
55 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
56 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
57 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
58 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
59 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
60 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
61 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
62 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
63 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
64 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
65 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
66 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
67 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
68 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
69 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
70 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
71 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
72 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
73 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
74 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
77 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
78 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
79 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
80 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
81 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
82 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
88 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
89 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
90 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
91 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
92 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
93 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
94 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
95 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
96 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
97 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
98 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
99 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
100 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
101 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
102 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
103 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
104 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
105 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
106 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
107 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
108 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
109 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
110 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
111 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
112 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
113 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
114 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
115 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
116 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
117 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
118 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
119 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
120 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
121 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
122 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
123 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
124 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
125 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
126 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
127 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
128 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
129 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
130 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
131 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
132 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
133 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
134 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
135 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
136 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
137 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
138 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
139 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
140 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
141 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
142 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
143 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
144 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
145 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
146 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
147 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
148 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
149 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
150 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
151 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
152 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
153 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
154 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
155 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
156 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
157 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
158 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
159 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
160 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
161 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
162 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
163 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
164 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
173 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
174 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
175 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
176 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
177 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
178 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
179 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
180 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
181 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
182 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
183 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
184 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 65.66
Metatranscriptomes 0.38
Isolates 33.96

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.15
Nodule 0.38
Rhizoplane 0
Rhizosphere 75.09
Stem 0
Stem Tuber 0
Unclassified 20.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10013220 3300001989 Bacteria 3017
2 JGI25160J50197_1002334 3300003354 Bacteria 8880
3 Ga0070683_100012437 3300005329 Bacteria 7397
4 Ga0070691_10003479 3300005341 Bacteria 7089
5 Ga0068853_100202260 3300005539 Bacteria 1808
6 Ga0068855_100002401 3300005563 Bacteria 23101
7 Ga0068855_100100013 3300005563 Bacteria 3340
8 Ga0068854_100000085 3300005578 Bacteria 67657
9 Ga0068856_100069540 3300005614 Bacteria 3481
10 Ga0068856_100150438 3300005614 Bacteria 2337
11 Ga0075368_10002552 3300006042 Bacteria 5963
12 Ga0075363_100010916 3300006048 Bacteria 4334
13 Ga0075367_10001330 3300006178 Bacteria 10479
14 Ga0075367_10005278 3300006178 Bacteria 6392
15 Ga0105237_10055433 3300009545 Bacteria 3970
16 Ga0105246_10034931 3300011119 Bacteria 3355
17 Ga0157372_10088193 3300013307 Bacteria 3522
18 Ga0182006_1035231 3300015261 Bacteria 1997
19 Ga0182007_10001468 3300015262 Bacteria 12623
20 Ga0183367_1001 3300015688 Bacteria 1225545
21 Ga0206356_10289398 3300020070 Bacteria 5872
22 Ga0209758_1025288 3300025297 Bacteria 2610
23 Ga0207426_1000760 3300025302 Bacteria 35891
24 Ga0207426_1007242 3300025302 Bacteria 4674
25 Ga0207647_10020086 3300025904 Bacteria 4484
26 Ga0207695_10033376 3300025913 Bacteria 5614
27 Ga0207667_10000138 3300025949 Bacteria 110270
28 Ga0207667_10007549 3300025949 Bacteria 13049
29 Ga0207640_10000004 3300025981 Bacteria 489403
30 Ga0207639_10032976 3300026041 Bacteria 3817
31 Ga0307515_10000462 3300028794 Bacteria 97164
32 Ga0307515_10122796 3300028794 Bacteria 2926
33 Ga0268256_1023579 3300030500 Bacteria 1595
34 Ga0307511_10089635 3300030521 Bacteria 2094
35 Ga0307512_10002471 3300030522 Bacteria 23281
36 Ga0307512_10014759 3300030522 Bacteria 7271
37 Ga0307513_10008741 3300031456 Bacteria 12902
38 Ga0307509_10114278 3300031507 Bacteria 2695
39 Ga0307508_10015023 3300031616 Bacteria 7059
40 Ga0307508_10050733 3300031616 Bacteria 3691
41 Ga0307508_10062871 3300031616 Bacteria 3276
42 Ga0307508_10108474 3300031616 Bacteria 2375
43 Ga0307514_10064854 3300031649 Bacteria 2768
44 Ga0307514_10097601 3300031649 Bacteria 2119
45 Ga0307514_10127783 3300031649 Bacteria 1757
46 Ga0307516_10024452 3300031730 Bacteria 6169
47 Ga0307518_10055878 3300031838 Bacteria 2868
48 Ga0307518_10084540 3300031838 Bacteria 2287
49 Ga0307507_10012391 3300033179 Bacteria 10536
50 Ga0307507_10020410 3300033179 Bacteria 7421
51 Ga0307510_10005960 3300033180 Bacteria 14541
52 Ga0395898_0028776 3300037466 Bacteria 5569
53 Ga0395898_0210373 3300037466 Bacteria 1855
54 Ga0439439_0000928 3300041406 Bacteria 5444
55 Ga0439439_0002408 3300041406 Bacteria 3968
56 Ga0439433_0005588 3300041999 Bacteria 2699
57 Ga0439449_0020060 3300042007 Bacteria 2505
58 Ga0439449_0024004 3300042007 Bacteria 2280
59 Ga0439457_000766 3300042014 Bacteria 9554
60 Ga0439457_020695 3300042014 Bacteria 1459
61 Ga0450894_000265 3300042131 Bacteria 9401
62 Ga0450903_000043 3300042138 Bacteria 24686
63 Ga0439458_0008397 3300042157 Bacteria 2298
64 Ga0466969_0017953 3300044656 Bacteria 3690
65 Ga0466972_0000886 3300044658 Bacteria 14414
66 Ga0466972_0033040 3300044658 Bacteria 2538
67 Ga0466972_0045368 3300044658 Bacteria 2131
68 Ga0466972_0059762 3300044658 Bacteria 1829
69 Ga0466966_0008590 3300044684 Bacteria 6761
70 Ga0466966_0016812 3300044684 Bacteria 4833
71 Ga0466966_0030962 3300044684 Bacteria 3470
72 Ga0466961_0002063 3300044693 Bacteria 12516
73 Ga0466961_0002244 3300044693 Bacteria 12024
74 Ga0466961_0018309 3300044693 Bacteria 4503
75 Ga0466963_0003094 3300044694 Bacteria 9432
76 Ga0466963_0010829 3300044694 Bacteria 5536
77 Ga0466963_0035617 3300044694 Bacteria 3243
78 Ga0466964_0003932 3300044706 Bacteria 5462
79 Ga0466971_0000798 3300044719 Bacteria 12732
80 Ga0466971_0009580 3300044719 Bacteria 4227
81 Ga0466968_0015032 3300044735 Bacteria 3066
82 Ga0466970_0000152 3300044765 Bacteria 32457
83 Ga0466970_0001980 3300044765 Bacteria 9898
84 Ga0466970_0023289 3300044765 Bacteria 3233
85 Ga0466957_0001037 3300044842 Bacteria 14339
86 Ga0466957_0001482 3300044842 Bacteria 12312
87 Ga0466957_0108501 3300044842 Bacteria 1758
88 Ga0466960_0014010 3300044901 Bacteria 3419
89 Ga0466960_0027263 3300044901 Bacteria 2604
90 Ga0466959_0000679 3300045049 Bacteria 19885
91 Ga0466958_0001978 3300045836 Bacteria 10072
92 Ga0466958_0017150 3300045836 Bacteria 4180
93 Ga0466967_0000293 3300045976 Bacteria 22336
94 Ga0466967_0019924 3300045976 Bacteria 5408
95 Ga0495592_0077318 3300046454 Bacteria 2413
96 Ga0495592_0136587 3300046454 Bacteria 1709
97 Ga0495603_0002045 3300046455 Bacteria 11870
98 Ga0495603_0009295 3300046455 Bacteria 5944
99 Ga0495629_0003019 3300046459 Bacteria 12810
100 Ga0495629_0009674 3300046459 Bacteria 7041
101 Ga0495638_0020608 3300046460 Bacteria 4355
102 Ga0495651_0001951 3300046462 Bacteria 15949
103 Ga0495580_0048359 3300046472 Bacteria 3012
104 Ga0495605_0007007 3300046474 Bacteria 6433
105 Ga0495662_0031166 3300046476 Bacteria 2575
106 Ga0495664_0027403 3300046477 Bacteria 3321
107 Ga0495594_0005051 3300046499 Bacteria 6790
108 Ga0495594_0036821 3300046499 Bacteria 2669
109 Ga0495606_0030551 3300046507 Bacteria 3763
110 Ga0495618_0111531 3300046514 Bacteria 1751
111 Ga0495628_0001859 3300046516 Bacteria 19170
112 Ga0495628_0187186 3300046516 Bacteria 1564
113 Ga0495631_0005606 3300046518 Bacteria 6560
114 Ga0495643_0061625 3300046522 Bacteria 1988
115 Ga0495666_0034563 3300046526 Bacteria 2466
116 Ga0495652_0104778 3300046529 Bacteria 2287
117 Ga0495640_0012076 3300046533 Bacteria 6616
118 Ga0495587_0004037 3300046536 Bacteria 9725
119 Ga0495597_0015390 3300046542 Bacteria 3623
120 Ga0495645_0007261 3300046543 Bacteria 7709
121 Ga0495622_0006536 3300046557 Bacteria 5407
122 Ga0495633_0038022 3300046558 Bacteria 2300
123 Ga0495634_0016256 3300046642 Bacteria 5323
124 Ga0495634_0125196 3300046642 Bacteria 1643
125 Ga0495625_0065627 3300046660 Bacteria 2558
126 Ga0495635_0039020 3300046663 Bacteria 3287
127 Ga0495588_0059960 3300046674 Bacteria 1969
128 Ga0495657_0001363 3300046675 Bacteria 21211
129 Ga0495657_0046881 3300046675 Bacteria 2924
130 Ga0495623_0055722 3300046679 Bacteria 2491
131 Ga0495646_0000779 3300046680 Bacteria 17794
132 Ga0495646_0094726 3300046680 Bacteria 1719
133 Ga0495613_0055067 3300046689 Bacteria 2923
134 Ga0495613_0056473 3300046689 Bacteria 2882
135 Ga0495613_0062121 3300046689 Bacteria 2734
136 Ga0495671_0004295 3300046692 Bacteria 8562
137 Ga0495649_0013996 3300046694 Bacteria 4614
138 Ga0495600_0073127 3300046809 Bacteria 2238
139 Ga0495604_0000746 3300047317 Bacteria 27316
140 Ga0495604_0014644 3300047317 Bacteria 6252
141 Ga0495676_0008731 3300047321 Bacteria 9273
142 Ga0495676_0010834 3300047321 Bacteria 8248
143 Ga0495676_0017591 3300047321 Bacteria 6315
144 Ga0495676_0023104 3300047321 Bacteria 5401
145 Ga0495680_0005333 3300047322 Bacteria 12128
146 Ga0495680_0006931 3300047322 Bacteria 10458
147 Ga0495687_002450 3300047443 Bacteria 14881
148 Ga0495687_014139 3300047443 Bacteria 4126
149 Ga0495687_074586 3300047443 Bacteria 1348
150 Ga0495685_000489 3300047447 Bacteria 12254
151 Ga0495684_0154411 3300047471 Bacteria 1715
152 Ga0495593_0002399 3300047673 Bacteria 11271
153 Ga0495593_0008504 3300047673 Bacteria 5967
154 Ga0495602_0020372 3300048088 Bacteria 6555
155 Ga0495614_0003066 3300048089 Bacteria 7448
156 Ga0495614_0003492 3300048089 Bacteria 7035
157 Ga0501031_0021180 3300049568 Bacteria 4240
158 Ga0501032_0008683 3300049569 Bacteria 7402
159 Ga0501033_0024675 3300049570 Bacteria 4534
160 Ga0501036_0000579 3300049572 Bacteria 26421
161 Ga0501036_0085557 3300049572 Bacteria 2665
162 Ga0501037_0005606 3300049573 Bacteria 9149
163 Ga0501042_0011520 3300049578 Bacteria 5971
164 Ga0501043_0005096 3300049579 Bacteria 10635
165 Ga0501046_0020948 3300049580 Bacteria 5397
166 Ga0501073_0130517 3300049589 Bacteria 1742
167 Ga0501044_0006222 3300049823 Bacteria 13197
168 Ga0501044_0008124 3300049823 Bacteria 11516
169 Ga0501044_0061527 3300049823 Bacteria 3840
170 nmdc:mga06z11_8395_c1 3300050494 Bacteria 4304
171 Ga0500610_0017587 3300053079 Bacteria 3437
172 Ga0500640_028252 3300053095 Bacteria 2448
173 Ga0466962_0000324 3300061719 Bacteria 20473
174 Ga0466962_0007708 3300061719 Bacteria 5158
175 Ga0466962_0017009 3300061719 Bacteria 3503

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005563 Ga0068855_100100013 Ga0068855_1001000132 351
2 3300025949 Ga0207667_10007549 Ga0207667_100075499 351
3 3300005563 Ga0068855_100002401 Ga0068855_10000240118 352
4 3300025949 Ga0207667_10000138 Ga0207667_100001385 352
5 3300046516 Ga0495628_0001859 Ga0495628_0001859_106_1461 353
6 3300046529 Ga0495652_0104778 Ga0495652_0104778_279_1667 353
7 3300046642 Ga0495634_0125196 Ga0495634_0125196_189_1577 353
8 3300046675 Ga0495657_0046881 Ga0495657_0046881_68_1456 353
9 3300047317 Ga0495604_0014644 Ga0495604_0014644_878_2233 353
10 3300047322 Ga0495680_0006931 Ga0495680_0006931_7606_8994 353
11 3300005329 Ga0070683_100012437 Ga0070683_1000124373 354
12 3300005578 Ga0068854_100000085 Ga0068854_10000008538 357
13 3300005614 Ga0068856_100069540 Ga0068856_1000695403 357
14 3300020070 Ga0206356_10289398 Ga0206356_102893983 357
15 3300025981 Ga0207640_10000004 Ga0207640_10000004467 357
16 3300005341 Ga0070691_10003479 Ga0070691_100034794 358
17 3300025913 Ga0207695_10033376 Ga0207695_100333765 358
18 3300044658 Ga0466972_0059762 Ga0466972_0059762_365_1579 362
19 3300044684 Ga0466966_0008590 Ga0466966_0008590_4323_5537 362
20 3300044693 Ga0466961_0002244 Ga0466961_0002244_2720_3934 362
21 3300044694 Ga0466963_0010829 Ga0466963_0010829_104_1318 362
22 3300044706 Ga0466964_0003932 Ga0466964_0003932_1980_3194 362
23 3300044719 Ga0466971_0000798 Ga0466971_0000798_6993_8207 362
24 3300044735 Ga0466968_0015032 Ga0466968_0015032_1355_2569 362
25 3300044765 Ga0466970_0000152 Ga0466970_0000152_19359_20573 362
26 3300044842 Ga0466957_0001037 Ga0466957_0001037_4234_5448 362
27 3300045836 Ga0466958_0001978 Ga0466958_0001978_7762_8976 362
28 3300045976 Ga0466967_0000293 Ga0466967_0000293_6745_7959 362
29 3300061719 Ga0466962_0000324 Ga0466962_0000324_4139_5353 362
30 3300003354 JGI25160J50197_1002334 JGI25160J50197_10023349 365
31 3300025302 Ga0207426_1000760 Ga0207426_100076018 365
32 3300006042 Ga0075368_10002552 Ga0075368_100025524 366
33 3300006178 Ga0075367_10005278 Ga0075367_100052785 366
34 3300050494 nmdc:mga06z11_8395_c1 nmdc:mga06z11_8395_c1_1215_2498 366
35 3300044765 Ga0466970_0001980 Ga0466970_0001980_8699_9850 368
36 3300044842 Ga0466957_0108501 Ga0466957_0108501_208_1374 368
37 3300046455 Ga0495603_0002045 Ga0495603_0002045_3976_5127 368
38 3300046459 Ga0495629_0003019 Ga0495629_0003019_7716_8867 368
39 3300047321 Ga0495676_0023104 Ga0495676_0023104_1822_2973 368
40 3300048089 Ga0495614_0003066 Ga0495614_0003066_2384_3535 368
41 iso_pu_bacteria 2862178590 2862178730 368
42 3300031838 Ga0307518_10055878 Ga0307518_100558782 369
43 iso_pu_bacteria 2875391855 2875398079 370
44 3300049823 Ga0501044_0008124 Ga0501044_0008124_9780_10991 371
45 iso_pu_bacteria 2862507626 2862513451 371
46 iso_pu_bacteria 2912723979 2912727051 371
47 iso_pu_bacteria 2912757875 2912757947 371
48 3300030522 Ga0307512_10002471 Ga0307512_1000247110 372
49 3300031616 Ga0307508_10108474 Ga0307508_101084742 372
50 iso_pu_bacteria 2547132111 2547408989 372
51 iso_pu_bacteria 2811994917 2812483004 372
52 iso_pu_bacteria 8025478263 8025479989 372
53 3300031616 Ga0307508_10062871 Ga0307508_100628712 374
54 3300031730 Ga0307516_10024452 Ga0307516_100244523 374
55 3300033179 Ga0307507_10020410 Ga0307507_100204102 374
56 3300046454 Ga0495592_0136587 Ga0495592_0136587_254_1405 374
57 3300046462 Ga0495651_0001951 Ga0495651_0001951_12902_14053 374
58 3300046476 Ga0495662_0031166 Ga0495662_0031166_873_2024 374
59 3300046477 Ga0495664_0027403 Ga0495664_0027403_879_2030 374
60 3300046516 Ga0495628_0187186 Ga0495628_0187186_124_1275 374
61 3300046536 Ga0495587_0004037 Ga0495587_0004037_880_2031 374
62 3300046543 Ga0495645_0007261 Ga0495645_0007261_1745_2896 374
63 3300046642 Ga0495634_0016256 Ga0495634_0016256_1618_2769 374
64 3300046663 Ga0495635_0039020 Ga0495635_0039020_922_2073 374
65 3300046680 Ga0495646_0000779 Ga0495646_0000779_2674_3825 374
66 3300046809 Ga0495600_0073127 Ga0495600_0073127_922_2073 374
67 3300047317 Ga0495604_0000746 Ga0495604_0000746_779_1930 374
68 3300047321 Ga0495676_0010834 Ga0495676_0010834_6191_7342 374
69 3300047443 Ga0495687_014139 Ga0495687_014139_2893_4044 374
70 3300047471 Ga0495684_0154411 Ga0495684_0154411_398_1549 374
71 3300047673 Ga0495593_0002399 Ga0495593_0002399_7896_9047 374
72 3300048088 Ga0495602_0020372 Ga0495602_0020372_1281_2432 374
73 3300048089 Ga0495614_0003492 Ga0495614_0003492_5208_6359 374
74 3300053095 Ga0500640_028252 Ga0500640_028252_416_1567 374
75 iso_pu_bacteria 2554235005 2554260548 374
76 iso_pu_bacteria 2643221578 2643904914 374
77 iso_pu_bacteria 2643221587 2643943244 374
78 iso_pu_bacteria 2643221670 2644388225 374
79 iso_pu_bacteria 2643221673 2644402972 374
80 iso_pu_bacteria 2643221677 2644430712 374
81 iso_pu_bacteria 2784746768 2785372906 374
82 iso_pu_bacteria 2808606982 2811843686 374
83 iso_pu_bacteria 2818991463 2819699887 374
84 iso_pu_bacteria 2918501144 2918507297 374
85 iso_pu_bacteria 2946045630 2946052472 374
86 iso_pu_bacteria 2966598605 2966605342 374
87 iso_pu_bacteria 3006493962 3006497001 374
88 iso_pu_bacteria 8025478263 8025480208 374
89 iso_pu_bacteria 8048406513 8048407320 374
90 3300037466 Ga0395898_0028776 Ga0395898_0028776_3966_5099 375
91 iso_pu_bacteria 2767802112 2768646190 375
92 iso_pu_bacteria 2966598605 2966600032 375
93 iso_pu_bacteria 2643221578 2643904022 376
94 iso_pu_bacteria 2643221673 2644402376 376
95 iso_pu_bacteria 2784746763 2785340344 376
96 iso_pu_bacteria 2808606982 2811846206 376
97 iso_pu_bacteria 2862574272 2862580361 376
98 iso_pu_bacteria 2863404153 2863409509 376
99 iso_pu_bacteria 2867369537 2867371184 376
100 iso_pu_bacteria 2875391855 2875397490 376
101 iso_pu_bacteria 2912723979 2912729384 376
102 iso_pu_bacteria 2935390628 2935392487 376
103 iso_pu_bacteria 2946045630 2946047016 376
104 iso_pu_bacteria 2990059506 2990067845 376
105 iso_pu_bacteria 8048406513 8048413116 376
106 3300044694 Ga0466963_0035617 Ga0466963_0035617_27_1166 377
107 iso_pu_bacteria 2643221548 2643761913 377
108 iso_pu_bacteria 2643221682 2644460660 377
109 3300031649 Ga0307514_10097601 Ga0307514_100976012 378
110 3300031649 Ga0307514_10127783 Ga0307514_101277832 378
111 3300041406 Ga0439439_0002408 Ga0439439_0002408_596_1738 378
112 3300042014 Ga0439457_020695 Ga0439457_020695_123_1265 378
113 3300044901 Ga0466960_0027263 Ga0466960_0027263_953_2095 378
114 iso_pu_bacteria 2582581312 2585298771 378
115 iso_pu_bacteria 2582581314 2585311931 378
116 iso_pu_bacteria 2616644941 2616902675 378
117 iso_pu_bacteria 2811994917 2812477846 378
118 iso_pu_bacteria 2867369537 2867374550 378
119 iso_pu_bacteria 2954711539 2954713467 378
120 iso_pu_bacteria 2954721474 2954723431 378
121 iso_pu_bacteria 2954731030 2954738398 378
122 iso_pu_bacteria 2954740390 2954742334 378
123 iso_pu_bacteria 2954749733 2954757259 378
124 iso_pu_bacteria 2954759201 2954761305 378
125 iso_pu_bacteria 2990088156 2990089673 378
126 iso_pu_bacteria 2997451912 2997459329 378
127 iso_pu_bacteria 8054160619 8054163029 378
128 3300049568 Ga0501031_0021180 Ga0501031_0021180_1370_2515 379
129 3300049569 Ga0501032_0008683 Ga0501032_0008683_702_1847 379
130 3300049570 Ga0501033_0024675 Ga0501033_0024675_845_1990 379
131 3300049572 Ga0501036_0085557 Ga0501036_0085557_1290_2435 379
132 3300049573 Ga0501037_0005606 Ga0501037_0005606_1225_2370 379
133 3300049578 Ga0501042_0011520 Ga0501042_0011520_1064_2209 379
134 3300049579 Ga0501043_0005096 Ga0501043_0005096_3621_4766 379
135 3300049580 Ga0501046_0020948 Ga0501046_0020948_1891_3036 379
136 3300049589 Ga0501073_0130517 Ga0501073_0130517_539_1684 379
137 3300049823 Ga0501044_0061527 Ga0501044_0061527_2496_3641 379
138 iso_pu_bacteria 2547132111 2547411888 379
139 iso_pu_bacteria 2582581314 2585316560 379
140 iso_pu_bacteria 2616644814 2616699895 379
141 iso_pu_bacteria 2643221647 2644270044 379
142 iso_pu_bacteria 2784132148 2784591326 379
143 iso_pu_bacteria 2786546132 2786675690 379
144 iso_pu_bacteria 2808606375 2808914405 379
145 iso_pu_bacteria 2808606448 2809234909 379
146 iso_pu_bacteria 2811994879 2812355098 379
147 iso_pu_bacteria 2852635781 2852638627 379
148 iso_pu_bacteria 2862178590 2862182469 379
149 iso_pu_bacteria 2862281513 2862283655 379
150 iso_pu_bacteria 2862507626 2862511025 379
151 iso_pu_bacteria 2867475112 2867476691 379
152 iso_pu_bacteria 2873151551 2873153298 379
153 iso_pu_bacteria 2873151551 2873158141 379
154 iso_pu_bacteria 2912757875 2912763752 379
155 iso_pu_bacteria 2935390628 2935391247 379
156 iso_pu_bacteria 2946064051 2946070797 379
157 iso_pu_bacteria 2947224130 2947225993 379
158 iso_pu_bacteria 2954002825 2954010172 379
159 iso_pu_bacteria 2954380949 2954383122 379
160 iso_pu_bacteria 2954673503 2954679869 379
161 iso_pu_bacteria 2954682443 2954684284 379
162 iso_pu_bacteria 2954691527 2954693834 379
163 iso_pu_bacteria 2954701450 2954708946 379
164 iso_pu_bacteria 2997451912 2997453590 379
165 iso_pu_bacteria 3006486233 3006487583 379
166 iso_pu_bacteria 3006493962 3006501163 379
167 iso_pu_bacteria 8008574985 8008576388 379
168 iso_pu_bacteria 8023623736 8023624120 379
169 iso_pu_bacteria 8023623736 8023626050 379
170 iso_pu_bacteria 8025530807 8025532930 379
171 iso_pu_bacteria 8056829672 8056829744 379
172 3300005539 Ga0068853_100202260 Ga0068853_1002022601 380
173 3300026041 Ga0207639_10032976 Ga0207639_100329764 380
174 3300044658 Ga0466972_0045368 Ga0466972_0045368_536_1711 380
175 3300047447 Ga0495685_000489 Ga0495685_000489_5973_7127 380
176 3300049572 Ga0501036_0000579 Ga0501036_0000579_18957_20114 381
177 iso_pu_bacteria 2582581313 2585302872 381
178 3300046455 Ga0495603_0009295 Ga0495603_0009295_1489_2640 382
179 3300046459 Ga0495629_0009674 Ga0495629_0009674_4040_5191 382
180 3300046499 Ga0495594_0005051 Ga0495594_0005051_3807_4958 382
181 3300046557 Ga0495622_0006536 Ga0495622_0006536_419_1570 382
182 3300046674 Ga0495588_0059960 Ga0495588_0059960_192_1343 382
183 3300047321 Ga0495676_0017591 Ga0495676_0017591_3305_4456 382
184 3300001989 JGI24739J22299_10013220 JGI24739J22299_100132202 383
185 3300005614 Ga0068856_100150438 Ga0068856_1001504382 383
186 3300006048 Ga0075363_100010916 Ga0075363_1000109163 383
187 3300006178 Ga0075367_10001330 Ga0075367_100013302 383
188 3300009545 Ga0105237_10055433 Ga0105237_100554332 383
189 3300011119 Ga0105246_10034931 Ga0105246_100349312 383
190 3300013307 Ga0157372_10088193 Ga0157372_100881932 383
191 3300015261 Ga0182006_1035231 Ga0182006_10352312 383
192 3300015262 Ga0182007_10001468 Ga0182007_100014689 383
193 3300015688 Ga0183367_1001 Ga0183367_1001369 383
194 3300025297 Ga0209758_1025288 Ga0209758_10252881 383
195 3300025302 Ga0207426_1007242 Ga0207426_10072421 383
196 3300025904 Ga0207647_10020086 Ga0207647_100200862 383
197 3300028794 Ga0307515_10000462 Ga0307515_1000046216 383
198 3300028794 Ga0307515_10122796 Ga0307515_101227962 383
199 3300030500 Ga0268256_1023579 Ga0268256_10235792 383
200 3300030521 Ga0307511_10089635 Ga0307511_100896352 383
201 3300030522 Ga0307512_10014759 Ga0307512_100147592 383
202 3300031456 Ga0307513_10008741 Ga0307513_100087412 383
203 3300031507 Ga0307509_10114278 Ga0307509_101142782 383
204 3300031616 Ga0307508_10015023 Ga0307508_100150233 383
205 3300031616 Ga0307508_10050733 Ga0307508_100507332 383
206 3300031649 Ga0307514_10064854 Ga0307514_100648542 383
207 3300031838 Ga0307518_10084540 Ga0307518_100845402 383
208 3300033179 Ga0307507_10012391 Ga0307507_100123915 383
209 3300033180 Ga0307510_10005960 Ga0307510_100059602 383
210 3300037466 Ga0395898_0210373 Ga0395898_0210373_354_1505 383
211 3300041406 Ga0439439_0000928 Ga0439439_0000928_3697_4848 383
212 3300041999 Ga0439433_0005588 Ga0439433_0005588_1504_2655 383
213 3300042007 Ga0439449_0020060 Ga0439449_0020060_1339_2490 383
214 3300042007 Ga0439449_0024004 Ga0439449_0024004_447_1598 383
215 3300042014 Ga0439457_000766 Ga0439457_000766_2023_3174 383
216 3300042131 Ga0450894_000265 Ga0450894_000265_8095_9291 383
217 3300042138 Ga0450903_000043 Ga0450903_000043_17560_18714 383
218 3300042157 Ga0439458_0008397 Ga0439458_0008397_508_1662 383
219 3300044656 Ga0466969_0017953 Ga0466969_0017953_1829_2980 383
220 3300044658 Ga0466972_0000886 Ga0466972_0000886_8918_10069 383
221 3300044658 Ga0466972_0033040 Ga0466972_0033040_547_1698 383
222 3300044684 Ga0466966_0016812 Ga0466966_0016812_1416_2567 383
223 3300044684 Ga0466966_0030962 Ga0466966_0030962_802_1953 383
224 3300044693 Ga0466961_0002063 Ga0466961_0002063_11157_12308 383
225 3300044693 Ga0466961_0018309 Ga0466961_0018309_1891_3042 383
226 3300044694 Ga0466963_0003094 Ga0466963_0003094_6273_7424 383
227 3300044719 Ga0466971_0009580 Ga0466971_0009580_1439_2590 383
228 3300044765 Ga0466970_0023289 Ga0466970_0023289_1279_2430 383
229 3300044842 Ga0466957_0001482 Ga0466957_0001482_10097_11248 383
230 3300044901 Ga0466960_0014010 Ga0466960_0014010_369_1520 383
231 3300045049 Ga0466959_0000679 Ga0466959_0000679_17216_18367 383
232 3300045836 Ga0466958_0017150 Ga0466958_0017150_670_1821 383
233 3300045976 Ga0466967_0019924 Ga0466967_0019924_1945_3096 383
234 3300046454 Ga0495592_0077318 Ga0495592_0077318_298_1449 383
235 3300046460 Ga0495638_0020608 Ga0495638_0020608_2099_3262 383
236 3300046472 Ga0495580_0048359 Ga0495580_0048359_1414_2565 383
237 3300046474 Ga0495605_0007007 Ga0495605_0007007_532_1683 383
238 3300046499 Ga0495594_0036821 Ga0495594_0036821_684_1835 383
239 3300046507 Ga0495606_0030551 Ga0495606_0030551_21_1172 383
240 3300046514 Ga0495618_0111531 Ga0495618_0111531_575_1726 383
241 3300046518 Ga0495631_0005606 Ga0495631_0005606_3572_4723 383
242 3300046522 Ga0495643_0061625 Ga0495643_0061625_275_1426 383
243 3300046526 Ga0495666_0034563 Ga0495666_0034563_897_2048 383
244 3300046533 Ga0495640_0012076 Ga0495640_0012076_5128_6279 383
245 3300046542 Ga0495597_0015390 Ga0495597_0015390_262_1413 383
246 3300046558 Ga0495633_0038022 Ga0495633_0038022_40_1191 383
247 3300046660 Ga0495625_0065627 Ga0495625_0065627_1325_2476 383
248 3300046675 Ga0495657_0001363 Ga0495657_0001363_9707_10858 383
249 3300046679 Ga0495623_0055722 Ga0495623_0055722_1070_2221 383
250 3300046680 Ga0495646_0094726 Ga0495646_0094726_155_1306 383
251 3300046689 Ga0495613_0055067 Ga0495613_0055067_56_1207 383
252 3300046689 Ga0495613_0056473 Ga0495613_0056473_1560_2711 383
253 3300046689 Ga0495613_0062121 Ga0495613_0062121_383_1534 383
254 3300046692 Ga0495671_0004295 Ga0495671_0004295_3922_5073 383
255 3300046694 Ga0495649_0013996 Ga0495649_0013996_2675_3826 383
256 3300047321 Ga0495676_0008731 Ga0495676_0008731_6090_7241 383
257 3300047322 Ga0495680_0005333 Ga0495680_0005333_4834_5985 383
258 3300047443 Ga0495687_002450 Ga0495687_002450_5030_6181 383
259 3300047443 Ga0495687_074586 Ga0495687_074586_50_1201 383
260 3300047673 Ga0495593_0008504 Ga0495593_0008504_172_1323 383
261 3300049823 Ga0501044_0006222 Ga0501044_0006222_7784_8935 383
262 3300053079 Ga0500610_0017587 Ga0500610_0017587_636_1787 383
263 3300061719 Ga0466962_0007708 Ga0466962_0007708_804_1955 383
264 3300061719 Ga0466962_0017009 Ga0466962_0017009_1869_3020 383
265 iso_pu_bacteria 3006493962 3006500623 383

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13478

XdhC_C

XdhC Rossmann domain

202

344

0.99

PF02625

XdhC_CoxI

XdhC and CoxI family

7

74

0.97

PF02625

XdhC_CoxI

XdhC and CoxI family

114

179

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2we7-assembly1.cif.gz_A-2 crystal structure of mycobacterium tuberculosis rv0376c homologue from mycobacterium smegmatis 0.9373 3 350
2we8-assembly1.cif.gz_A-2 crystal structure of mycobacterium tuberculosis rv0376c homologue from mycobacterium smegmatis 0.9352 3 352
2we8-assembly2.cif.gz_B-3 crystal structure of mycobacterium tuberculosis rv0376c homologue from mycobacterium smegmatis 0.9253 1 350
2we8-assembly1.cif.gz_A-2 crystal structure of mycobacterium tuberculosis rv0376c homologue from mycobacterium smegmatis 0.9247 3 352
2we7-assembly1.cif.gz_A-2 crystal structure of mycobacterium tuberculosis rv0376c homologue from mycobacterium smegmatis 0.924 3 350
ID Description Score Start End Superfamily
2we7A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9508 205 350 3.40.50.720
af_Q4CQU6_365_588_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9174 201 234 3.50.50.60
2we7A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9084 205 350 3.40.50.720
af_Q54GT1_13_197_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8977 202 234 3.50.50.60
af_Q54H02_2_246_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8923 201 236 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A250VU92-F1-model_v4 XdhC Rossmann domain-containing protein 0.9616 204 335
AF-A0A535P6A4-F1-model_v4 Xanthine dehydrogenase 0.9471 201 358
AF-A0A3B9J537-F1-model_v4 Sulfurylase large subunit 0.9432 110 280
AF-A0A4Q5T957-F1-model_v4 XshC-Cox1-family protein 0.9431 201 351
AF-A0A2W6E5Y6-F1-model_v4 XdhC Rossmann domain-containing protein 0.9426 226 361

Feature Viewer

pLDDT pTM Quality
87.07 0.82 High
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Predicted Structure (AlphaFold2)

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