F373667

General Info

Members Datasets Scaffolds Average Seq Length
265 188 530 454

Family's Representative Sequence

Representative Sequence 3300053133|Ga0500655_000472|Ga0500655_000472_3171_4718
Length 515
Sequence MTVSVRFCRSSEWLFLADCVEKLRRILGAGSQFACPSSSMEVRIMMGRNTIQDQLFYAFNLEDHVPRDHLLRGVNRFLDLGELRQHLAPFYSHTGRPSVDPELMIRMLVIGYCLGIRSERRLCEEVHLNLAYRWFCHLGLEDRVPDHSTFSKNRHGRFRQSDALRFVFETVLRRCMTEGLVQGEGFAVDASIIKADANRARNVPASDVAQWRQGTQCNRAVREYLDALDAQNPVTEDALEEVHNTAAASRNISPTDPAAQWTAAPGGPAFYAYSTNYLIDLSAGIIMDVEATPAHRTPEVDSTRTMIDRVEQRFDIKPRRLVGDTAYGTAPLLGWMVEDKQIEPHVPVWDKTVRKDGSLSIGEFQWQPERNEYVCPEGRALRNDRRQFTTPRTRITKADTVIYRASQADCVDCGMKDRCCPSTPFRKIARSIHEGAREVARSITQTPQYGQSRRERKKVEMLFAHLKRIMKLDRLRLRGLSGAQDEFLMAATAQNLRRMAKWLMPSAADAAMKTA

Samples

Sample ID Description Type Environment
1 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
4 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
5 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
44 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
49 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
50 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
75 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
76 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
77 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
78 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
118 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
119 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
120 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
121 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
122 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
123 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
124 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
125 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
126 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
127 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
128 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
129 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
130 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
131 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
132 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
133 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
134 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
135 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
136 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
137 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
138 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
139 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
140 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
141 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
142 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
143 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
144 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
145 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
146 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
147 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
148 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
149 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
150 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
151 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
152 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
153 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
154 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
155 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
156 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
157 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
158 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
159 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
160 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
161 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
162 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
163 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
164 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
165 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
166 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
167 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
168 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
169 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
170 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
174 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
175 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
176 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
177 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
180 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
181 2643221693 Rhizobium sp. Root491 Isolate Unclassified
182 2818991446 Variovorax sp. 1180 Isolate Unclassified
183 2842677519 Variovorax sp. R-72495 Isolate Unclassified
184 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
185 2899924645 Variovorax sp. 369 Isolate Unclassified
186 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
187 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
188 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.98
Metatranscriptomes 0
Isolates 3.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.79
Nodule 0.38
Rhizoplane 2.26
Rhizosphere 85.66
Stem 0
Stem Tuber 0
Unclassified 0.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500655_000472 3300053133 Bacteria 8146
2 JGI24737J22298_10004965 3300001990 Bacteria 4608
3 Ga0055537_1001977 3300003773 Bacteria 7313
4 Ga0055534_1005488 3300003784 Bacteria 3385
5 Ga0055528_1003916 3300003790 Bacteria 7313
6 Ga0070676_10095667 3300005328 Bacteria 1827
7 Ga0070683_100231065 3300005329 Bacteria 1758
8 Ga0070690_100031530 3300005330 Bacteria 3303
9 Ga0068869_100005081 3300005334 Bacteria 8249
10 Ga0070666_10003630 3300005335 Bacteria 9360
11 Ga0068868_100004216 3300005338 Bacteria 10058
12 Ga0070689_100085170 3300005340 Bacteria 2485
13 Ga0070661_100091400 3300005344 Bacteria 2254
14 Ga0070668_100176241 3300005347 Bacteria 1743
15 Ga0070668_100184969 3300005347 Bacteria 1704
16 Ga0070668_100197310 3300005347 Bacteria 1651
17 Ga0070669_100230873 3300005353 Bacteria 1467
18 Ga0070675_100001782 3300005354 Bacteria 15888
19 Ga0070675_100191224 3300005354 Bacteria 1773
20 Ga0070671_100172337 3300005355 Bacteria 1830
21 Ga0070671_100183824 3300005355 Bacteria 1770
22 Ga0070674_100080042 3300005356 Bacteria 2332
23 Ga0070674_100114322 3300005356 Bacteria 1987
24 Ga0070673_100011243 3300005364 Bacteria 6103
25 Ga0070659_100004950 3300005366 Bacteria 9532
26 Ga0070659_100193150 3300005366 Bacteria 1674
27 Ga0070667_100153096 3300005367 Bacteria 2027
28 Ga0070667_100215839 3300005367 Bacteria 1706
29 Ga0070703_10006572 3300005406 Bacteria 3260
30 Ga0070713_100000019 3300005436 Bacteria 110100
31 Ga0070713_100172049 3300005436 Bacteria 1941
32 Ga0070711_100150987 3300005439 Bacteria 1752
33 Ga0070705_100044454 3300005440 Bacteria 2551
34 Ga0070708_100064916 3300005445 Bacteria 3272
35 Ga0070708_100116225 3300005445 Bacteria 2463
36 Ga0070708_100193907 3300005445 Bacteria 1901
37 Ga0070678_100007073 3300005456 Bacteria 6632
38 Ga0070678_100014560 3300005456 Bacteria 4969
39 Ga0070678_100198989 3300005456 Bacteria 1652
40 Ga0068867_100093001 3300005459 Bacteria 2291
41 Ga0068867_100154931 3300005459 Bacteria 1803
42 Ga0070706_100164728 3300005467 Bacteria 2070
43 Ga0070706_100166151 3300005467 Bacteria 2060
44 Ga0070706_100212387 3300005467 Bacteria 1807
45 Ga0070698_100109887 3300005471 Bacteria 2723
46 Ga0070698_100239519 3300005471 Bacteria 1747
47 Ga0070699_100127837 3300005518 Bacteria 2239
48 Ga0070699_100190889 3300005518 Bacteria 1820
49 Ga0070684_100198839 3300005535 Bacteria 1825
50 Ga0068853_100058634 3300005539 Bacteria 3324
51 Ga0070672_100092099 3300005543 Bacteria 2447
52 Ga0070672_100175278 3300005543 Bacteria 1785
53 Ga0070665_100127437 3300005548 Bacteria 2548
54 Ga0070704_100028627 3300005549 Bacteria 3709
55 Ga0070664_100008834 3300005564 Bacteria 8166
56 Ga0070664_100230319 3300005564 Bacteria 1661
57 Ga0068856_100204579 3300005614 Bacteria 1989
58 Ga0068852_100236790 3300005616 Bacteria 1743
59 Ga0068864_100003480 3300005618 Bacteria 13008
60 Ga0068864_100138456 3300005618 Bacteria 2193
61 Ga0068866_10078837 3300005718 Bacteria 1763
62 Ga0068861_100170964 3300005719 Bacteria 1801
63 Ga0068851_10013680 3300005834 Bacteria 3841
64 Ga0068870_10089423 3300005840 Bacteria 1719
65 Ga0068863_100030171 3300005841 Bacteria 5180
66 Ga0068863_100185663 3300005841 Bacteria 1997
67 Ga0068858_100003087 3300005842 Bacteria 16661
68 Ga0068858_100045550 3300005842 Bacteria 4065
69 Ga0068858_100061079 3300005842 Bacteria 3484
70 Ga0068858_100251903 3300005842 Bacteria 1677
71 Ga0068860_100013075 3300005843 Bacteria 8146
72 Ga0081455_10068402 3300005937 Bacteria 2956
73 Ga0081538_10090593 3300005981 Bacteria 1582
74 Ga0070712_100126455 3300006175 Bacteria 1931
75 Ga0097621_100001985 3300006237 Bacteria 13953
76 Ga0097621_100161506 3300006237 Bacteria 1926
77 Ga0068871_100004855 3300006358 Bacteria 9395
78 Ga0068871_100073499 3300006358 Bacteria 2819
79 Ga0068871_100190530 3300006358 Bacteria 1766
80 Ga0068871_100224927 3300006358 Bacteria 1627
81 Ga0075428_100247184 3300006844 Bacteria 1923
82 Ga0075430_100193014 3300006846 Bacteria 1692
83 Ga0075431_100164132 3300006847 Bacteria 2283
84 Ga0075433_10213667 3300006852 Bacteria 1714
85 Ga0075434_100051278 3300006871 Bacteria 4100
86 Ga0075435_100201450 3300007076 Bacteria 1687
87 Ga0111539_10196974 3300009094 Bacteria 2349
88 Ga0111539_10240671 3300009094 Bacteria 2107
89 Ga0105241_10100044 3300009174 Bacteria 2304
90 Ga0105242_10028274 3300009176 Bacteria 4462
91 Ga0105242_10200068 3300009176 Bacteria 1774
92 Ga0105248_10017326 3300009177 Bacteria 7940
93 Ga0105248_10036660 3300009177 Bacteria 5485
94 Ga0105237_10059306 3300009545 Bacteria 3829
95 Ga0105238_10149801 3300009551 Bacteria 2308
96 Ga0105238_10259926 3300009551 Bacteria 1716
97 Ga0105239_10370658 3300010375 Bacteria 1618
98 Ga0157370_10015286 3300013104 Bacteria 7808
99 Ga0157369_10123704 3300013105 Bacteria 2744
100 Ga0157374_10022289 3300013296 Bacteria 5649
101 Ga0157374_10236041 3300013296 Bacteria 1797
102 Ga0163162_10001994 3300013306 Bacteria 19195
103 Ga0163162_10205259 3300013306 Bacteria 2100
104 Ga0163162_10302836 3300013306 Bacteria 1731
105 Ga0157372_10009371 3300013307 Bacteria 10418
106 Ga0157372_10123424 3300013307 Bacteria 2977
107 Ga0157372_10295780 3300013307 Bacteria 1883
108 Ga0157375_10015359 3300013308 Bacteria 6852
109 Ga0157375_10255948 3300013308 Bacteria 1912
110 Ga0157375_10311406 3300013308 Bacteria 1739
111 Ga0163163_10002957 3300014325 Bacteria 14373
112 Ga0163163_10238207 3300014325 Bacteria 1869
113 Ga0163163_10259938 3300014325 Bacteria 1787
114 Ga0157380_10240948 3300014326 Bacteria 1630
115 Ga0157379_10124333 3300014968 Bacteria 2321
116 Ga0157379_10234145 3300014968 Bacteria 1665
117 Ga0157376_10231400 3300014969 Bacteria 1717
118 Ga0182006_1048773 3300015261 Bacteria 1636
119 Ga0182007_10025846 3300015262 Bacteria 2041
120 Ga0209565_1000543 3300025263 Bacteria 26292
121 Ga0209673_1001251 3300025273 Bacteria 26294
122 Ga0209675_1000377 3300025291 Bacteria 37221
123 Ga0209564_1004003 3300025295 Bacteria 9339
124 Ga0209050_1001289 3300025298 Bacteria 28441
125 Ga0207653_10004866 3300025885 Bacteria 4194
126 Ga0207682_10039872 3300025893 Bacteria 1911
127 Ga0207680_10010547 3300025903 Bacteria 4627
128 Ga0207680_10120141 3300025903 Bacteria 1717
129 Ga0207645_10051224 3300025907 Bacteria 2637
130 Ga0207645_10077537 3300025907 Bacteria 2129
131 Ga0207684_10070349 3300025910 Bacteria 2974
132 Ga0207684_10200639 3300025910 Bacteria 1721
133 Ga0207671_10051801 3300025914 Bacteria 3041
134 Ga0207649_10152238 3300025920 Bacteria 1594
135 Ga0207652_10214964 3300025921 Bacteria 1732
136 Ga0207681_10020103 3300025923 Bacteria 4227
137 Ga0207681_10050646 3300025923 Bacteria 2810
138 Ga0207681_10213422 3300025923 Bacteria 1489
139 Ga0207650_10158568 3300025925 Bacteria 1791
140 Ga0207659_10000493 3300025926 Bacteria 23772
141 Ga0207659_10175586 3300025926 Bacteria 1693
142 Ga0207700_10000832 3300025928 Bacteria 17842
143 Ga0207690_10083009 3300025932 Bacteria 2242
144 Ga0207686_10181520 3300025934 Bacteria 1493
145 Ga0207670_10071748 3300025936 Bacteria 2396
146 Ga0207669_10152298 3300025937 Bacteria 1621
147 Ga0207691_10161097 3300025940 Bacteria 1968
148 Ga0207691_10177181 3300025940 Bacteria 1864
149 Ga0207711_10042269 3300025941 Bacteria 3883
150 Ga0207661_10221570 3300025944 Bacteria 1672
151 Ga0207679_10054840 3300025945 Bacteria 2936
152 Ga0207651_10000362 3300025960 Bacteria 19229
153 Ga0207668_10153172 3300025972 Bacteria 1787
154 Ga0207658_10003167 3300025986 Bacteria 11748
155 Ga0207658_10213304 3300025986 Bacteria 1619
156 Ga0207658_10214433 3300025986 Bacteria 1616
157 Ga0207677_10005492 3300026023 Bacteria 6884
158 Ga0207677_10179513 3300026023 Bacteria 1664
159 Ga0207703_10009245 3300026035 Bacteria 7750
160 Ga0207703_10049287 3300026035 Bacteria 3404
161 Ga0207703_10072884 3300026035 Bacteria 2839
162 Ga0207703_10194333 3300026035 Bacteria 1799
163 Ga0207678_10133338 3300026067 Bacteria 2119
164 Ga0207702_10224728 3300026078 Bacteria 1751
165 Ga0207641_10002344 3300026088 Bacteria 17526
166 Ga0207641_10229280 3300026088 Bacteria 1725
167 Ga0207648_10150213 3300026089 Bacteria 2055
168 Ga0207648_10195032 3300026089 Bacteria 1796
169 Ga0207676_10003917 3300026095 Bacteria 10510
170 Ga0207676_10234812 3300026095 Bacteria 1641
171 Ga0207674_10100918 3300026116 Bacteria 2867
172 Ga0207675_100261771 3300026118 Bacteria 1676
173 Ga0207683_10014985 3300026121 Bacteria 6598
174 Ga0207683_10107518 3300026121 Bacteria 2495
175 Ga0207683_10139950 3300026121 Bacteria 2180
176 Ga0268266_10087190 3300028379 Bacteria 2730
177 Ga0316183_1035962 3300030742 Bacteria 8929
178 Ga0265330_10049585 3300031235 Bacteria 1844
179 Ga0265331_10011888 3300031250 Bacteria 4744
180 Ga0265327_10047749 3300031251 Unclassified 2256
181 Ga0316575_10043660 3300031665 Bacteria 1777
182 Ga0316579_10010833 3300031691 Bacteria 3863
183 Ga0316576_10118780 3300031727 Bacteria 1985
184 Ga0316576_10165584 3300031727 Bacteria 1668
185 Ga0307405_10067430 3300031731 Bacteria 2286
186 Ga0316577_10096651 3300031733 Bacteria 1654
187 Ga0307410_10187567 3300031852 Bacteria 1570
188 Ga0307406_10162490 3300031901 Bacteria 1607
189 Ga0307416_100005199 3300032002 Bacteria 7957
190 Ga0307416_100051953 3300032002 Bacteria 3278
191 Ga0307414_10001646 3300032004 Bacteria 11622
192 Ga0307414_10005351 3300032004 Bacteria 7063
193 Ga0307411_10078189 3300032005 Bacteria 2267
194 Ga0307510_10167975 3300033180 Bacteria 1778
195 Ga0373941_0036611 3300035115 Bacteria 1493
196 Ga0373962_0009107 3300035242 Bacteria 2453
197 Ga0316574_0019589 3300035398 Bacteria 3993
198 Ga0316574_0103231 3300035398 Bacteria 1825
199 Ga0316574_0139850 3300035398 Bacteria 1559
200 Ga0373931_0095922 3300035691 Bacteria 1660
201 Ga0373937_0174318 3300036401 Bacteria 2018
202 Ga0316584_0063339 3300036712 Bacteria 2768
203 Ga0316584_0128927 3300036712 Bacteria 1889
204 Ga0316584_0174583 3300036712 Bacteria 1592
205 Ga0400483_044211 3300039062 Bacteria 5081
206 Ga0400483_235269 3300039062 Bacteria 2934
207 Ga0400483_265297 3300039062 Bacteria 1857
208 Ga0451807_1393467 3300041486 Bacteria 1794
209 Ga0439455_0010228 3300042012 Bacteria 2058
210 Ga0439435_0009775 3300042436 Bacteria 2258
211 Ga0439444_0007157 3300042437 Bacteria 1706
212 Ga0439460_0009212 3300042461 Bacteria 2504
213 Ga0466969_0053866 3300044656 Bacteria 1972
214 Ga0451576_0003162 3300045051 Bacteria 23040
215 Ga0495651_0174683 3300046462 Bacteria 1526
216 Ga0495580_0112649 3300046472 Bacteria 1889
217 Ga0495596_0056582 3300046500 Bacteria 1531
218 Ga0495620_0048098 3300046515 Bacteria 1832
219 Ga0495663_0032569 3300046525 Bacteria 1553
220 Ga0495598_0023504 3300046537 Bacteria 1661
221 Ga0495621_0016011 3300046539 Bacteria 2399
222 Ga0495621_0029754 3300046539 Bacteria 1863
223 Ga0495588_0057061 3300046674 Bacteria 2016
224 Ga0495657_0114292 3300046675 Bacteria 1706
225 Ga0495599_0168199 3300046678 Bacteria 1353
226 Ga0495670_0035413 3300046691 Bacteria 2488
227 Ga0495600_0072110 3300046809 Bacteria 2256
228 Ga0495600_0133670 3300046809 Bacteria 1612
229 Ga0495660_0017198 3300046810 Bacteria 4165
230 Ga0495614_0016477 3300048089 Bacteria 3216
231 Ga0496101_0234295 3300048904 Bacteria 1428
232 Ga0496105_0146212 3300048908 Bacteria 1944
233 Ga0496108_0255474 3300048911 Bacteria 1525
234 Ga0496111_0212069 3300048914 Bacteria 1438
235 Ga0496114_0223748 3300048917 Bacteria 1652
236 Ga0496116_0062593 3300048919 Bacteria 2402
237 Ga0496117_0006596 3300048920 Bacteria 11666
238 Ga0496117_0095865 3300048920 Bacteria 1894
239 Ga0496118_0003625 3300048921 Bacteria 19166
240 Ga0501249_000057 3300049679 Bacteria 40985
241 nmdc:mga09592_244987_c1 3300050508 Bacteria 1553
242 nmdc:mga06r32_152781_c1 3300050510 Bacteria 2288
243 nmdc:mga08y16_266503_c1 3300050511 Bacteria 1769
244 nmdc:mga0n895_292513_c1 3300050512 Bacteria 1651
245 nmdc:mga0n895_337092_c1 3300050512 Bacteria 1528
246 nmdc:mga0a205_205334_c1 3300050515 Bacteria 1860
247 nmdc:mga0a205_256829_c1 3300050515 Bacteria 1626
248 Ga0500610_0000165 3300053079 Bacteria 19845
249 Ga0500610_0031627 3300053079 Bacteria 2689
250 Ga0495655_0014239 3300053083 Bacteria 1663
251 Ga0500651_0047003 3300053093 Bacteria 2714
252 Ga0500594_0000272 3300053118 Bacteria 12015
253 Ga0500655_000096 3300053133 Bacteria 23067
254 Ga0500559_0000034 3300053136 Bacteria 112152
255 Ga0500622_0036829 3300053156 Bacteria 2556
256 Ga0500638_005545 3300053162 Bacteria 5042
257 Ga0500638_016401 3300053162 Bacteria 3418
258 2644520495 2643221693 Bacteria 5513853
259 2819598322 2818991446 Bacteria 7757362
260 2842682937 2842677519 Bacteria 5615038
261 2889791220 2889790730 Bacteria 5689708
262 2899928909 2899924645 Bacteria 7487985
263 2919709247 2919704043 Bacteria 5560311
264 2945985748 2945984333 Bacteria 7358892
265 8024492365 8024486573 Bacteria 6540512
266 Ga0500655_000472
267 JGI24737J22298_10004965
268 Ga0055537_1001977
269 Ga0055534_1005488
270 Ga0055528_1003916
271 Ga0070676_10095667
272 Ga0070683_100231065
273 Ga0070690_100031530
274 Ga0068869_100005081
275 Ga0070666_10003630
276 Ga0068868_100004216
277 Ga0070689_100085170
278 Ga0070661_100091400
279 Ga0070668_100176241
280 Ga0070668_100184969
281 Ga0070668_100197310
282 Ga0070669_100230873
283 Ga0070675_100001782
284 Ga0070675_100191224
285 Ga0070671_100172337
286 Ga0070671_100183824
287 Ga0070674_100080042
288 Ga0070674_100114322
289 Ga0070673_100011243
290 Ga0070659_100004950
291 Ga0070659_100193150
292 Ga0070667_100153096
293 Ga0070667_100215839
294 Ga0070703_10006572
295 Ga0070713_100000019
296 Ga0070713_100172049
297 Ga0070711_100150987
298 Ga0070705_100044454
299 Ga0070708_100064916
300 Ga0070708_100116225
301 Ga0070708_100193907
302 Ga0070678_100007073
303 Ga0070678_100014560
304 Ga0070678_100198989
305 Ga0068867_100093001
306 Ga0068867_100154931
307 Ga0070706_100164728
308 Ga0070706_100166151
309 Ga0070706_100212387
310 Ga0070698_100109887
311 Ga0070698_100239519
312 Ga0070699_100127837
313 Ga0070699_100190889
314 Ga0070684_100198839
315 Ga0068853_100058634
316 Ga0070672_100092099
317 Ga0070672_100175278
318 Ga0070665_100127437
319 Ga0070704_100028627
320 Ga0070664_100008834
321 Ga0070664_100230319
322 Ga0068856_100204579
323 Ga0068852_100236790
324 Ga0068864_100003480
325 Ga0068864_100138456
326 Ga0068866_10078837
327 Ga0068861_100170964
328 Ga0068851_10013680
329 Ga0068870_10089423
330 Ga0068863_100030171
331 Ga0068863_100185663
332 Ga0068858_100003087
333 Ga0068858_100045550
334 Ga0068858_100061079
335 Ga0068858_100251903
336 Ga0068860_100013075
337 Ga0081455_10068402
338 Ga0081538_10090593
339 Ga0070712_100126455
340 Ga0097621_100001985
341 Ga0097621_100161506
342 Ga0068871_100004855
343 Ga0068871_100073499
344 Ga0068871_100190530
345 Ga0068871_100224927
346 Ga0075428_100247184
347 Ga0075430_100193014
348 Ga0075431_100164132
349 Ga0075433_10213667
350 Ga0075434_100051278
351 Ga0075435_100201450
352 Ga0111539_10196974
353 Ga0111539_10240671
354 Ga0105241_10100044
355 Ga0105242_10028274
356 Ga0105242_10200068
357 Ga0105248_10017326
358 Ga0105248_10036660
359 Ga0105237_10059306
360 Ga0105238_10149801
361 Ga0105238_10259926
362 Ga0105239_10370658
363 Ga0157370_10015286
364 Ga0157369_10123704
365 Ga0157374_10022289
366 Ga0157374_10236041
367 Ga0163162_10001994
368 Ga0163162_10205259
369 Ga0163162_10302836
370 Ga0157372_10009371
371 Ga0157372_10123424
372 Ga0157372_10295780
373 Ga0157375_10015359
374 Ga0157375_10255948
375 Ga0157375_10311406
376 Ga0163163_10002957
377 Ga0163163_10238207
378 Ga0163163_10259938
379 Ga0157380_10240948
380 Ga0157379_10124333
381 Ga0157379_10234145
382 Ga0157376_10231400
383 Ga0182006_1048773
384 Ga0182007_10025846
385 Ga0209565_1000543
386 Ga0209673_1001251
387 Ga0209675_1000377
388 Ga0209564_1004003
389 Ga0209050_1001289
390 Ga0207653_10004866
391 Ga0207682_10039872
392 Ga0207680_10010547
393 Ga0207680_10120141
394 Ga0207645_10051224
395 Ga0207645_10077537
396 Ga0207684_10070349
397 Ga0207684_10200639
398 Ga0207671_10051801
399 Ga0207649_10152238
400 Ga0207652_10214964
401 Ga0207681_10020103
402 Ga0207681_10050646
403 Ga0207681_10213422
404 Ga0207650_10158568
405 Ga0207659_10000493
406 Ga0207659_10175586
407 Ga0207700_10000832
408 Ga0207690_10083009
409 Ga0207686_10181520
410 Ga0207670_10071748
411 Ga0207669_10152298
412 Ga0207691_10161097
413 Ga0207691_10177181
414 Ga0207711_10042269
415 Ga0207661_10221570
416 Ga0207679_10054840
417 Ga0207651_10000362
418 Ga0207668_10153172
419 Ga0207658_10003167
420 Ga0207658_10213304
421 Ga0207658_10214433
422 Ga0207677_10005492
423 Ga0207677_10179513
424 Ga0207703_10009245
425 Ga0207703_10049287
426 Ga0207703_10072884
427 Ga0207703_10194333
428 Ga0207678_10133338
429 Ga0207702_10224728
430 Ga0207641_10002344
431 Ga0207641_10229280
432 Ga0207648_10150213
433 Ga0207648_10195032
434 Ga0207676_10003917
435 Ga0207676_10234812
436 Ga0207674_10100918
437 Ga0207675_100261771
438 Ga0207683_10014985
439 Ga0207683_10107518
440 Ga0207683_10139950
441 Ga0268266_10087190
442 Ga0316183_1035962
443 Ga0265330_10049585
444 Ga0265331_10011888
445 Ga0265327_10047749
446 Ga0316575_10043660
447 Ga0316579_10010833
448 Ga0316576_10118780
449 Ga0316576_10165584
450 Ga0307405_10067430
451 Ga0316577_10096651
452 Ga0307410_10187567
453 Ga0307406_10162490
454 Ga0307416_100005199
455 Ga0307416_100051953
456 Ga0307414_10001646
457 Ga0307414_10005351
458 Ga0307411_10078189
459 Ga0307510_10167975
460 Ga0373941_0036611
461 Ga0373962_0009107
462 Ga0316574_0019589
463 Ga0316574_0103231
464 Ga0316574_0139850
465 Ga0373931_0095922
466 Ga0373937_0174318
467 Ga0316584_0063339
468 Ga0316584_0128927
469 Ga0316584_0174583
470 Ga0400483_044211
471 Ga0400483_235269
472 Ga0400483_265297
473 Ga0451807_1393467
474 Ga0439455_0010228
475 Ga0439435_0009775
476 Ga0439444_0007157
477 Ga0439460_0009212
478 Ga0466969_0053866
479 Ga0451576_0003162
480 Ga0495651_0174683
481 Ga0495580_0112649
482 Ga0495596_0056582
483 Ga0495620_0048098
484 Ga0495663_0032569
485 Ga0495598_0023504
486 Ga0495621_0016011
487 Ga0495621_0029754
488 Ga0495588_0057061
489 Ga0495657_0114292
490 Ga0495599_0168199
491 Ga0495670_0035413
492 Ga0495600_0072110
493 Ga0495600_0133670
494 Ga0495660_0017198
495 Ga0495614_0016477
496 Ga0496101_0234295
497 Ga0496105_0146212
498 Ga0496108_0255474
499 Ga0496111_0212069
500 Ga0496114_0223748
501 Ga0496116_0062593
502 Ga0496117_0006596
503 Ga0496117_0095865
504 Ga0496118_0003625
505 Ga0501249_000057
506 nmdc:mga09592_244987_c1
507 nmdc:mga06r32_152781_c1
508 nmdc:mga08y16_266503_c1
509 nmdc:mga0n895_292513_c1
510 nmdc:mga0n895_337092_c1
511 nmdc:mga0a205_205334_c1
512 nmdc:mga0a205_256829_c1
513 Ga0500610_0000165
514 Ga0500610_0031627
515 Ga0495655_0014239
516 Ga0500651_0047003
517 Ga0500594_0000272
518 Ga0500655_000096
519 Ga0500559_0000034
520 Ga0500622_0036829
521 Ga0500638_005545
522 Ga0500638_016401
523 2644520495
524 2819598322
525 2842682937
526 2889791220
527 2899928909
528 2919709247
529 2945985748
530 8024492365

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05598

DUF772

Transposase domain (DUF772)

95

171

0.95

PF13751

DDE_Tnp_1_6

Transposase DDE domain

374

500

0.87

PF01609

DDE_Tnp_1

Transposase DDE domain

182

496

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wcj-assembly1.cif.gz_A structure of icab from ammonifex degensii 0.7394 242 269
3kkr-assembly1.cif.gz_A crystal structure of catalytic core domain of biv integrase in crystal form i 0.7138 219 297
6vrg-assembly2.cif.gz_D structure of hiv-1 integrase with native amino-terminal sequence 0.7074 219 290
2bgg-assembly2.cif.gz_B the structure of a piwi protein from archaeoglobus fulgidus complexed with a 16nt sirna duplex. 0.6559 218 270
8hoj-assembly2.cif.gz_B crystal structure of ugt71ap2 in complex with udp 0.6342 239 292
ID Description Score Start End Superfamily
af_O50414_43_217_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8213 202 441 3.30.420.10
af_P28916_100_246_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7757 139 295 3.30.420.10
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7494 140 294 3.30.420.10
4wcjA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.7394 242 269 3.20.20.370
af_Q0J8A6_545_735_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7378 138 297 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A4R7WD60-F1-model_v4 DDE family transposase 0.9694 234 447
AF-A0A1Y3FWV7-F1-model_v4 Transposase 0.9661 194 299 GO:0003677
GO:0004803
GO:0006313
AF-A0A7Y0F6U0-F1-model_v4 deleted 0.9592 231 407
AF-J2D7S0-F1-model_v4 deleted 0.9591 231 432
AF-A0A1Y3FWV7-F1-model_v4 Transposase 0.9573 194 299 GO:0003677
GO:0004803
GO:0006313

Map