F373638

General Info

Members Datasets Scaffolds Average Seq Length
265 174 263 457

Family's Representative Sequence

Representative Sequence 3300049593|Ga0501077_0001529|Ga0501077_0001529_5354_6871
Length 505
Sequence MKFVFCVKPAATRLDGTPGLDDVPSTVTHVLVVDDQQAVRTALVVLLDLHGIPCLEASSPEQALDIVRREDVGVVIQDMNFSKDTTSGTEGAELFRAIRALDPDLPVILITAWTSLENAVALVKEGAADYVAKPWDDQKLVLSVQNLLRLRAARFDALRLERRDSLAREELARRFDLCGLVYASRAMHEVVSLAVHVAPSDVAVLIGGPNGSGKEKLAEIVQANSRRKDKPFVRVNAGGLPDQLLEAELFGAEPGAYTGATKLRVGRFESAHGGTLFLDELGNLSLPGQMKLLRVLQTGEFQRLGSSTTRRADVRLISATNADLKAEIAAGRFREDLYFRLNVIELAVPPLVSRPEDIVLLAESFLARYAAGRSLVFSPEAVAALEQHEWPGNVRELDNRVQRATLVCDAKPILPSHLGLSERSQPESGPVSASAPPSSASGRDAEVRPPPGSNPLEDAERAVVESALARASGVVSRAAAELGLSRQALYRRMDRLGIAIERRVR

Samples

Sample ID Description Type Environment
1 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
66 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
96 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
97 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
98 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
99 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
100 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
101 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
102 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
103 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
109 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
110 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
111 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
112 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
113 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
116 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
117 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
118 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
121 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
122 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
123 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
124 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
125 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
128 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
129 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
130 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
144 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
145 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
148 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
149 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
150 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
151 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
152 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
153 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
154 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
155 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
156 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
160 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
161 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
162 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
163 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
164 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
165 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
166 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
167 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
168 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
169 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
170 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
171 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
174 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0
Isolates 0.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.4
Nodule 0
Rhizoplane 3.4
Rhizosphere 89.43
Stem 0
Stem Tuber 0
Unclassified 3.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJNas_1000706 3300000546 Bacteria 5612
2 rootH2_10075897 3300003320 Bacteria 7177
3 Ga0065704_10131085 3300005289 Bacteria 1628
4 Ga0070690_100007454 3300005330 Bacteria 6269
5 Ga0068869_100027459 3300005334 Bacteria 3968
6 Ga0068869_100050052 3300005334 Bacteria 3027
7 Ga0068869_100074103 3300005334 Bacteria 2526
8 Ga0070680_100013459 3300005336 Bacteria 6371
9 Ga0070682_100007612 3300005337 Bacteria 6103
10 Ga0070682_100015266 3300005337 Bacteria 4449
11 Ga0068868_100057088 3300005338 Bacteria 3084
12 Ga0070689_100021150 3300005340 Bacteria 4837
13 Ga0070675_100026938 3300005354 Bacteria 4616
14 Ga0070671_100024563 3300005355 Bacteria 4935
15 Ga0070667_100000044 3300005367 Bacteria 166321
16 Ga0070667_100000437 3300005367 Bacteria 43868
17 Ga0070667_100002311 3300005367 Bacteria 16723
18 Ga0070703_10000017 3300005406 Bacteria 80348
19 Ga0070701_10040469 3300005438 Bacteria 2369
20 Ga0070711_100167379 3300005439 Bacteria 1672
21 Ga0070705_100077969 3300005440 Bacteria 2025
22 Ga0070694_100001748 3300005444 Bacteria 12828
23 Ga0070694_100008988 3300005444 Bacteria 6121
24 Ga0070694_100010455 3300005444 Bacteria 5727
25 Ga0070663_100001012 3300005455 Bacteria 15323
26 Ga0070663_100006257 3300005455 Bacteria 7139
27 Ga0070662_100028301 3300005457 Bacteria 3899
28 Ga0070681_10196360 3300005458 Bacteria 1937
29 Ga0068867_100063926 3300005459 Bacteria 2735
30 Ga0070707_100231125 3300005468 Bacteria 1800
31 Ga0070697_100000084 3300005536 Bacteria 77273
32 Ga0070697_100014827 3300005536 Bacteria 6117
33 Ga0068853_100029640 3300005539 Bacteria 4616
34 Ga0068853_100132914 3300005539 Bacteria 2229
35 Ga0070686_100047800 3300005544 Bacteria 2707
36 Ga0070686_100096839 3300005544 Bacteria 1985
37 Ga0070665_100139549 3300005548 Bacteria 2427
38 Ga0070665_100147884 3300005548 Bacteria 2352
39 Ga0070704_100003535 3300005549 Bacteria 8982
40 Ga0070704_100079833 3300005549 Bacteria 2405
41 Ga0068859_100001749 3300005617 Bacteria 22101
42 Ga0068859_100214898 3300005617 Bacteria 2010
43 Ga0068864_100000778 3300005618 Bacteria 26780
44 Ga0068864_100088847 3300005618 Bacteria 2722
45 Ga0068861_100002187 3300005719 Bacteria 12689
46 Ga0068861_100018936 3300005719 Bacteria 4910
47 Ga0068861_100045154 3300005719 Bacteria 3316
48 Ga0068851_10009776 3300005834 Bacteria 4467
49 Ga0068863_100033762 3300005841 Bacteria 4875
50 Ga0068863_100177271 3300005841 Bacteria 2046
51 Ga0068862_100124338 3300005844 Bacteria 2276
52 Ga0081540_1008105 3300005983 Bacteria 7379
53 Ga0070715_10000002 3300006163 Bacteria 389554
54 Ga0075366_10010850 3300006195 Bacteria 5127
55 Ga0097621_100020860 3300006237 Bacteria 5056
56 Ga0097621_100066775 3300006237 Bacteria 2963
57 Ga0097621_100124781 3300006237 Bacteria 2186
58 Ga0068871_100042718 3300006358 Bacteria 3641
59 Ga0075433_10057512 3300006852 Bacteria 3399
60 Ga0075434_100000901 3300006871 Bacteria 23803
61 Ga0075434_100012732 3300006871 Bacteria 7982
62 Ga0075434_100097087 3300006871 Bacteria 2951
63 Ga0068865_100016664 3300006881 Bacteria 4707
64 Ga0068865_100046805 3300006881 Bacteria 2969
65 Ga0068865_100177985 3300006881 Bacteria 1636
66 Ga0075436_100000057 3300006914 Bacteria 65664
67 Ga0097620_100214906 3300006931 Bacteria 2010
68 Ga0075435_100000325 3300007076 Bacteria 29372
69 Ga0105240_10001655 3300009093 Bacteria 37827
70 Ga0105240_10057397 3300009093 Bacteria 4864
71 Ga0105247_10031432 3300009101 Bacteria 3222
72 Ga0105243_10003364 3300009148 Bacteria 12974
73 Ga0105241_10067242 3300009174 Bacteria 2773
74 Ga0105242_10000891 3300009176 Bacteria 23188
75 Ga0105242_10003834 3300009176 Bacteria 11689
76 Ga0105242_10007386 3300009176 Bacteria 8463
77 Ga0105248_10004732 3300009177 Bacteria 15066
78 Ga0105237_10008066 3300009545 Bacteria 11450
79 Ga0105237_10170284 3300009545 Bacteria 2178
80 Ga0105238_10021391 3300009551 Bacteria 6589
81 Ga0105249_10003079 3300009553 Bacteria 14400
82 Ga0105249_10152971 3300009553 Bacteria 2222
83 Ga0105239_10015098 3300010375 Bacteria 8563
84 Ga0105239_10056532 3300010375 Bacteria 4304
85 Ga0105239_10421653 3300010375 Bacteria 1512
86 Ga0157371_10140285 3300013102 Bacteria 1722
87 Ga0157370_10002711 3300013104 Bacteria 21180
88 Ga0157369_10000011 3300013105 Bacteria 271560
89 Ga0157369_10065924 3300013105 Bacteria 3897
90 Ga0157378_10000019 3300013297 Bacteria 132704
91 Ga0157378_10000289 3300013297 Bacteria 49048
92 Ga0157378_10014543 3300013297 Bacteria 6891
93 Ga0157378_10032025 3300013297 Bacteria 4644
94 Ga0163162_10021445 3300013306 Bacteria 6363
95 Ga0163162_10040096 3300013306 Bacteria 4681
96 Ga0163162_10296994 3300013306 Bacteria 1747
97 Ga0157372_10010875 3300013307 Bacteria 9687
98 Ga0157372_10077438 3300013307 Bacteria 3756
99 Ga0157375_10000431 3300013308 Bacteria 37819
100 Ga0157375_10002184 3300013308 Bacteria 16916
101 Ga0157375_10145714 3300013308 Bacteria 2499
102 Ga0157375_10449916 3300013308 Bacteria 1453
103 Ga0163163_10046596 3300014325 Bacteria 4259
104 Ga0157380_10002786 3300014326 Bacteria 11880
105 Ga0157380_10013191 3300014326 Bacteria 6017
106 Ga0157380_10197944 3300014326 Bacteria 1780
107 Ga0157376_10002606 3300014969 Bacteria 12249
108 Ga0157376_10009374 3300014969 Bacteria 7109
109 Ga0157376_10044503 3300014969 Bacteria 3649
110 Ga0182005_1013828 3300015265 Bacteria 2268
111 Ga0207653_10000066 3300025885 Bacteria 80383
112 Ga0207710_10010432 3300025900 Bacteria 3914
113 Ga0207680_10011578 3300025903 Bacteria 4461
114 Ga0207685_10000002 3300025905 Bacteria 438088
115 Ga0207654_10019388 3300025911 Bacteria 3589
116 Ga0207707_10003134 3300025912 Bacteria 14682
117 Ga0207695_10002421 3300025913 Bacteria 27630
118 Ga0207695_10002524 3300025913 Bacteria 26889
119 Ga0207695_10040066 3300025913 Bacteria 5029
120 Ga0207671_10000549 3300025914 Bacteria 50601
121 Ga0207671_10002847 3300025914 Bacteria 17963
122 Ga0207693_10110955 3300025915 Bacteria 2151
123 Ga0207646_10197689 3300025922 Bacteria 1816
124 Ga0207681_10039300 3300025923 Bacteria 3141
125 Ga0207694_10008911 3300025924 Bacteria 7575
126 Ga0207706_10044151 3300025933 Bacteria 3951
127 Ga0207686_10001515 3300025934 Bacteria 13099
128 Ga0207686_10002919 3300025934 Bacteria 9219
129 Ga0207686_10032799 3300025934 Bacteria 3094
130 Ga0207709_10008191 3300025935 Bacteria 5788
131 Ga0207711_10014652 3300025941 Bacteria 6515
132 Ga0207689_10011439 3300025942 Bacteria 7606
133 Ga0207689_10058613 3300025942 Bacteria 3167
134 Ga0207689_10138177 3300025942 Bacteria 2007
135 Ga0207667_10227474 3300025949 Bacteria 1910
136 Ga0207712_10008110 3300025961 Bacteria 6645
137 Ga0207658_10000043 3300025986 Bacteria 131765
138 Ga0207658_10003147 3300025986 Bacteria 11798
139 Ga0207703_10035996 3300026035 Bacteria 3936
140 Ga0207639_10224204 3300026041 Bacteria 1625
141 Ga0207678_10002831 3300026067 Bacteria 15727
142 Ga0207678_10013565 3300026067 Bacteria 7154
143 Ga0207678_10046774 3300026067 Bacteria 3742
144 Ga0207708_10055248 3300026075 Bacteria 3027
145 Ga0207648_10061342 3300026089 Bacteria 3279
146 Ga0207648_10085255 3300026089 Bacteria 2756
147 Ga0207676_10131578 3300026095 Bacteria 2128
148 Ga0207675_100006670 3300026118 Bacteria 10923
149 Ga0207675_100007253 3300026118 Bacteria 10482
150 Ga0207683_10008162 3300026121 Bacteria 8957
151 Ga0268265_10048443 3300028380 Bacteria 3190
152 Ga0265334_10037615 3300028573 Bacteria 1907
153 Ga0307515_10013243 3300028794 Bacteria 15426
154 Ga0265338_10034679 3300028800 Bacteria 4872
155 Ga0316576_10012712 3300031727 Bacteria 5567
156 Ga0307407_10007273 3300031903 Bacteria 5005
157 Ga0373950_0000027 3300034818 Bacteria 172704
158 Ga0373955_0069428 3300035172 Bacteria 1966
159 Ga0316574_0001856 3300035398 Bacteria 10310
160 Ga0316574_0022094 3300035398 Bacteria 3786
161 Ga0373933_0104293 3300035724 Bacteria 1762
162 Ga0373937_0118311 3300036401 Bacteria 2468
163 Ga0316584_0015934 3300036712 Bacteria 5384
164 Ga0395898_0217791 3300037466 Bacteria 1821
165 Ga0395905_0459377 3300037471 Bacteria 1172
166 Ga0451807_0280219 3300041486 Bacteria 5666
167 Ga0451849_0566296 3300041505 Bacteria 3815
168 Ga0451851_0371455 3300041507 Bacteria 2394
169 Ga0451853_0093411 3300041512 Bacteria 11220
170 Ga0466972_0017927 3300044658 Bacteria 3541
171 Ga0466970_0019678 3300044765 Bacteria 3501
172 Ga0451576_0023679 3300045051 Bacteria 6646
173 Ga0451576_0308150 3300045051 Bacteria 1656
174 Ga0495629_0100206 3300046459 Bacteria 2022
175 Ga0495664_0069965 3300046477 Bacteria 2095
176 Ga0495659_0019654 3300046664 Bacteria 2261
177 Ga0495658_0009468 3300046683 Bacteria 4857
178 Ga0495686_0014298 3300047472 Bacteria 5467
179 Ga0496100_0160325 3300048903 Bacteria 1612
180 Ga0496101_0176462 3300048904 Bacteria 1644
181 Ga0496104_0000018 3300048907 Bacteria 258184
182 Ga0496104_0115983 3300048907 Bacteria 2570
183 Ga0496105_0000080 3300048908 Bacteria 70744
184 Ga0496106_0043103 3300048909 Bacteria 3385
185 Ga0496114_0155616 3300048917 Bacteria 1985
186 Ga0496115_0054538 3300048918 Bacteria 3210
187 Ga0496118_0000352 3300048921 Bacteria 77969
188 Ga0496118_0000492 3300048921 Bacteria 65578
189 Ga0496122_0017637 3300048925 Bacteria 6658
190 Ga0496123_0002754 3300048926 Bacteria 21032
191 Ga0496126_0004906 3300048929 Bacteria 15629
192 Ga0501032_0009126 3300049569 Bacteria 7197
193 Ga0501033_0002950 3300049570 Bacteria 14218
194 Ga0501034_0000735 3300049571 Bacteria 49494
195 Ga0501034_0003701 3300049571 Bacteria 17265
196 Ga0501034_0013706 3300049571 Bacteria 8336
197 Ga0501034_0108707 3300049571 Bacteria 2764
198 Ga0501036_0005625 3300049572 Bacteria 10163
199 Ga0501036_0099961 3300049572 Bacteria 2453
200 Ga0501037_0001730 3300049573 Bacteria 15852
201 Ga0501037_0037100 3300049573 Bacteria 3593
202 Ga0501038_0009583 3300049574 Bacteria 8884
203 Ga0501038_0031831 3300049574 Bacteria 4658
204 Ga0501039_0001283 3300049575 Bacteria 18349
205 Ga0501042_0008731 3300049578 Bacteria 6721
206 Ga0501043_0002499 3300049579 Bacteria 15546
207 Ga0501046_0003664 3300049580 Bacteria 14071
208 Ga0501046_0027025 3300049580 Bacteria 4684
209 Ga0501046_0063398 3300049580 Bacteria 2886
210 Ga0501047_0000001 3300049581 Bacteria 658799
211 Ga0501047_0044584 3300049581 Bacteria 4286
212 Ga0501047_0046763 3300049581 Bacteria 4182
213 Ga0501047_0138624 3300049581 Bacteria 2311
214 Ga0501047_0176702 3300049581 Bacteria 2002
215 Ga0501048_0000587 3300049582 Bacteria 25813
216 Ga0501048_0068376 3300049582 Bacteria 2509
217 Ga0501067_0001596 3300049583 Bacteria 12419
218 Ga0501067_0026491 3300049583 Bacteria 3211
219 Ga0501067_0091955 3300049583 Bacteria 1684
220 Ga0501068_0000941 3300049584 Bacteria 15253
221 Ga0501068_0009311 3300049584 Bacteria 5492
222 Ga0501068_0057241 3300049584 Bacteria 2363
223 Ga0501069_0005061 3300049585 Bacteria 6833
224 Ga0501070_0026415 3300049586 Bacteria 4869
225 Ga0501071_0000933 3300049587 Bacteria 15862
226 Ga0501072_0000095 3300049588 Bacteria 64965
227 Ga0501072_0018473 3300049588 Bacteria 5370
228 Ga0501073_0000304 3300049589 Bacteria 32471
229 Ga0501073_0003807 3300049589 Bacteria 11329
230 Ga0501073_0043488 3300049589 Bacteria 3167
231 Ga0501074_0004085 3300049590 Bacteria 10413
232 Ga0501074_0029061 3300049590 Bacteria 4004
233 Ga0501074_0102174 3300049590 Bacteria 2052
234 Ga0501076_0074286 3300049592 Bacteria 2723
235 Ga0501077_0001529 3300049593 Bacteria 13941
236 Ga0501079_0000268 3300049741 Bacteria 32031
237 Ga0501079_0058973 3300049741 Bacteria 2961
238 Ga0501080_0010410 3300049742 Bacteria 8512
239 Ga0501081_0016502 3300049743 Bacteria 4883
240 Ga0501083_0012343 3300049744 Bacteria 5977
241 Ga0501035_0020726 3300049822 Bacteria 6041
242 Ga0501035_0087737 3300049822 Bacteria 2741
243 Ga0501044_0006708 3300049823 Bacteria 12688
244 Ga0501044_0018540 3300049823 Bacteria 7457
245 Ga0501045_0007172 3300049824 Bacteria 7732
246 nmdc:mga0k408_35284_c1 3300050493 Bacteria 2868
247 nmdc:mga0n895_17562_c1 3300050512 Bacteria 6597
248 nmdc:mga0n895_44183_c1 3300050512 Bacteria 4345
249 nmdc:mga0rr50_4115_c1 3300050513 Bacteria 8501
250 nmdc:mga08x19_16_c1 3300050514 Bacteria 348119
251 nmdc:mga0a205_74881_c1 3300050515 Bacteria 3271
252 Ga0500610_0000443 3300053079 Bacteria 12781
253 Ga0500643_008825 3300053087 Bacteria 3917
254 Ga0500651_0001866 3300053093 Bacteria 10840
255 Ga0500651_0036373 3300053093 Bacteria 3102
256 Ga0500597_000133 3300053120 Bacteria 15165
257 Ga0500559_0027451 3300053136 Bacteria 2430
258 Ga0500568_0001171 3300053139 Bacteria 17531
259 Ga0501084_0000046 3300054114 Bacteria 96044
260 Ga0501084_0027994 3300054114 Bacteria 4709
261 Ga0501084_0089123 3300054114 Bacteria 2589
262 Ga0501082_0000029 3300060353 Bacteria 100004
263 Ga0501082_0017175 3300060353 Bacteria 6233

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037471 Ga0395905_0459377 Ga0395905_0459377_52_1161 362
2 3300014326 Ga0157380_10197944 Ga0157380_101979442 368
3 3300046459 Ga0495629_0100206 Ga0495629_0100206_292_1437 373
4 3300013297 Ga0157378_10014543 Ga0157378_100145432 386
5 3300005337 Ga0070682_100015266 Ga0070682_1000152662 399
6 3300026067 Ga0207678_10013565 Ga0207678_100135652 399
7 3300014325 Ga0163163_10046596 Ga0163163_100465964 411
8 3300005455 Ga0070663_100006257 Ga0070663_1000062572 416
9 3300028800 Ga0265338_10034679 Ga0265338_100346792 418
10 3300031903 Ga0307407_10007273 Ga0307407_100072733 419
11 3300041505 Ga0451849_0566296 Ga0451849_0566296_1481_2896 429
12 3300041507 Ga0451851_0371455 Ga0451851_0371455_69_1484 429
13 3300041512 Ga0451853_0093411 Ga0451853_0093411_188_1603 429
14 3300005459 Ga0068867_100063926 Ga0068867_1000639263 431
15 3300026089 Ga0207648_10085255 Ga0207648_100852552 431
16 3300049571 Ga0501034_0108707 Ga0501034_0108707_117_1478 434
17 3300005334 Ga0068869_100074103 Ga0068869_1000741032 435
18 3300005548 Ga0070665_100147884 Ga0070665_1001478841 435
19 3300025942 Ga0207689_10138177 Ga0207689_101381773 435
20 3300035398 Ga0316574_0001856 Ga0316574_0001856_4831_6258 437
21 3300049572 Ga0501036_0099961 Ga0501036_0099961_74_1525 437
22 3300006195 Ga0075366_10010850 Ga0075366_100108502 438
23 3300049571 Ga0501034_0000735 Ga0501034_0000735_6322_7746 438
24 3300049579 Ga0501043_0002499 Ga0501043_0002499_6388_7812 438
25 3300049580 Ga0501046_0003664 Ga0501046_0003664_6322_7746 438
26 3300049581 Ga0501047_0000001 Ga0501047_0000001_111030_112454 438
27 3300049582 Ga0501048_0000587 Ga0501048_0000587_8589_10013 438
28 3300049583 Ga0501067_0026491 Ga0501067_0026491_1307_2722 438
29 3300049583 Ga0501067_0091955 Ga0501067_0091955_243_1667 438
30 3300049584 Ga0501068_0000941 Ga0501068_0000941_5906_7330 438
31 3300049586 Ga0501070_0026415 Ga0501070_0026415_1123_2547 438
32 3300049588 Ga0501072_0000095 Ga0501072_0000095_48764_50188 438
33 3300049589 Ga0501073_0043488 Ga0501073_0043488_1251_2675 438
34 3300049590 Ga0501074_0004085 Ga0501074_0004085_2702_4126 438
35 3300049741 Ga0501079_0000268 Ga0501079_0000268_25338_26762 438
36 3300049742 Ga0501080_0010410 Ga0501080_0010410_5449_6873 438
37 3300049744 Ga0501083_0012343 Ga0501083_0012343_1351_2775 438
38 3300050493 nmdc:mga0k408_35284_c1 nmdc:mga0k408_35284_c1_1033_2448 438
39 3300054114 Ga0501084_0000046 Ga0501084_0000046_81324_82748 438
40 3300060353 Ga0501082_0017175 Ga0501082_0017175_1479_2903 438
41 3300034818 Ga0373950_0000027 Ga0373950_0000027_159539_160969 440
42 3300003320 rootH2_10075897 rootH2_100758973 443
43 3300005340 Ga0070689_100021150 Ga0070689_1000211504 443
44 3300028794 Ga0307515_10013243 Ga0307515_100132433 444
45 3300036401 Ga0373937_0118311 Ga0373937_0118311_88_1425 445
46 3300041486 Ga0451807_0280219 Ga0451807_0280219_1127_2530 446
47 3300005336 Ga0070680_100013459 Ga0070680_1000134593 447
48 3300009093 Ga0105240_10001655 Ga0105240_1000165522 447
49 3300009174 Ga0105241_10067242 Ga0105241_100672422 447
50 3300013104 Ga0157370_10002711 Ga0157370_1000271117 447
51 3300013105 Ga0157369_10065924 Ga0157369_100659242 447
52 3300013307 Ga0157372_10077438 Ga0157372_100774383 447
53 3300025913 Ga0207695_10002524 Ga0207695_100025246 447
54 3300025949 Ga0207667_10227474 Ga0207667_102274742 447
55 3300037466 Ga0395898_0217791 Ga0395898_0217791_140_1495 447
56 3300044658 Ga0466972_0017927 Ga0466972_0017927_2000_3388 447
57 3300044765 Ga0466970_0019678 Ga0466970_0019678_1956_3344 447
58 3300049581 Ga0501047_0044584 Ga0501047_0044584_2075_3460 447
59 3300049589 Ga0501073_0000304 Ga0501073_0000304_3025_4464 447
60 3300005337 Ga0070682_100007612 Ga0070682_1000076124 448
61 3300005539 Ga0068853_100132914 Ga0068853_1001329142 448
62 3300005841 Ga0068863_100177271 Ga0068863_1001772712 448
63 3300006237 Ga0097621_100124781 Ga0097621_1001247811 448
64 3300006881 Ga0068865_100016664 Ga0068865_1000166644 448
65 3300006881 Ga0068865_100177985 Ga0068865_1001779851 448
66 3300009176 Ga0105242_10003834 Ga0105242_100038342 448
67 3300009545 Ga0105237_10170284 Ga0105237_101702841 448
68 3300009551 Ga0105238_10021391 Ga0105238_100213913 448
69 3300010375 Ga0105239_10015098 Ga0105239_100150983 448
70 3300013105 Ga0157369_10000011 Ga0157369_1000001177 448
71 3300013306 Ga0163162_10296994 Ga0163162_102969941 448
72 3300013308 Ga0157375_10000431 Ga0157375_1000043121 448
73 3300014969 Ga0157376_10002606 Ga0157376_100026066 448
74 3300014969 Ga0157376_10009374 Ga0157376_100093744 448
75 3300025911 Ga0207654_10019388 Ga0207654_100193882 448
76 3300025913 Ga0207695_10002421 Ga0207695_1000242112 448
77 3300025914 Ga0207671_10000549 Ga0207671_1000054912 448
78 3300025924 Ga0207694_10008911 Ga0207694_100089116 448
79 3300025934 Ga0207686_10032799 Ga0207686_100327992 448
80 3300026121 Ga0207683_10008162 Ga0207683_100081622 448
81 3300035724 Ga0373933_0104293 Ga0373933_0104293_138_1508 448
82 3300046683 Ga0495658_0009468 Ga0495658_0009468_416_1786 448
83 3300048907 Ga0496104_0000018 Ga0496104_0000018_80916_82286 448
84 3300048908 Ga0496105_0000080 Ga0496105_0000080_6160_7530 448
85 3300005354 Ga0070675_100026938 Ga0070675_1000269382 449
86 3300005367 Ga0070667_100000437 Ga0070667_10000043736 449
87 3300005539 Ga0068853_100029640 Ga0068853_1000296403 449
88 3300006237 Ga0097621_100066775 Ga0097621_1000667752 449
89 3300006881 Ga0068865_100046805 Ga0068865_1000468052 449
90 3300009101 Ga0105247_10031432 Ga0105247_100314322 449
91 3300013297 Ga0157378_10000289 Ga0157378_1000028933 449
92 3300013308 Ga0157375_10145714 Ga0157375_101457141 449
93 3300013308 Ga0157375_10449916 Ga0157375_104499161 449
94 3300025900 Ga0207710_10010432 Ga0207710_100104322 449
95 3300025903 Ga0207680_10011578 Ga0207680_100115783 449
96 3300025986 Ga0207658_10003147 Ga0207658_100031472 449
97 3300026089 Ga0207648_10061342 Ga0207648_100613422 449
98 3300026095 Ga0207676_10131578 Ga0207676_101315782 449
99 3300031727 Ga0316576_10012712 Ga0316576_100127122 449
100 3300035398 Ga0316574_0022094 Ga0316574_0022094_838_2202 449
101 3300036712 Ga0316584_0015934 Ga0316584_0015934_2358_3722 449
102 3300006871 Ga0075434_100000901 Ga0075434_1000009016 450
103 3300035172 Ga0373955_0069428 Ga0373955_0069428_58_1431 450
104 3300048904 Ga0496101_0176462 Ga0496101_0176462_118_1482 450
105 3300054114 Ga0501084_0089123 Ga0501084_0089123_619_1983 450
106 3300005330 Ga0070690_100007454 Ga0070690_1000074543 451
107 3300005334 Ga0068869_100027459 Ga0068869_1000274592 451
108 3300005338 Ga0068868_100057088 Ga0068868_1000570882 451
109 3300005367 Ga0070667_100002311 Ga0070667_1000023113 451
110 3300005406 Ga0070703_10000017 Ga0070703_1000001735 451
111 3300005444 Ga0070694_100008988 Ga0070694_1000089882 451
112 3300005444 Ga0070694_100010455 Ga0070694_1000104553 451
113 3300005457 Ga0070662_100028301 Ga0070662_1000283012 451
114 3300005468 Ga0070707_100231125 Ga0070707_1002311251 451
115 3300005536 Ga0070697_100000084 Ga0070697_1000000849 451
116 3300005536 Ga0070697_100014827 Ga0070697_1000148272 451
117 3300005544 Ga0070686_100096839 Ga0070686_1000968392 451
118 3300005549 Ga0070704_100079833 Ga0070704_1000798332 451
119 3300005617 Ga0068859_100001749 Ga0068859_1000017499 451
120 3300005617 Ga0068859_100214898 Ga0068859_1002148982 451
121 3300005618 Ga0068864_100088847 Ga0068864_1000888472 451
122 3300005719 Ga0068861_100018936 Ga0068861_1000189362 451
123 3300005719 Ga0068861_100045154 Ga0068861_1000451542 451
124 3300005844 Ga0068862_100124338 Ga0068862_1001243382 451
125 3300006163 Ga0070715_10000002 Ga0070715_10000002309 451
126 3300006852 Ga0075433_10057512 Ga0075433_100575123 451
127 3300006871 Ga0075434_100097087 Ga0075434_1000970872 451
128 3300006914 Ga0075436_100000057 Ga0075436_10000005710 451
129 3300006931 Ga0097620_100214906 Ga0097620_1002149062 451
130 3300007076 Ga0075435_100000325 Ga0075435_1000003254 451
131 3300009148 Ga0105243_10003364 Ga0105243_100033646 451
132 3300009176 Ga0105242_10000891 Ga0105242_100008916 451
133 3300009176 Ga0105242_10007386 Ga0105242_100073863 451
134 3300010375 Ga0105239_10421653 Ga0105239_104216531 451
135 3300013102 Ga0157371_10140285 Ga0157371_101402852 451
136 3300013297 Ga0157378_10000019 Ga0157378_10000019105 451
137 3300013297 Ga0157378_10032025 Ga0157378_100320253 451
138 3300013306 Ga0163162_10021445 Ga0163162_100214456 451
139 3300013306 Ga0163162_10040096 Ga0163162_100400963 451
140 3300013308 Ga0157375_10002184 Ga0157375_100021849 451
141 3300014326 Ga0157380_10002786 Ga0157380_100027864 451
142 3300014326 Ga0157380_10013191 Ga0157380_100131912 451
143 3300025885 Ga0207653_10000066 Ga0207653_100000664 451
144 3300025905 Ga0207685_10000002 Ga0207685_10000002142 451
145 3300025922 Ga0207646_10197689 Ga0207646_101976891 451
146 3300025923 Ga0207681_10039300 Ga0207681_100393003 451
147 3300025933 Ga0207706_10044151 Ga0207706_100441512 451
148 3300025934 Ga0207686_10001515 Ga0207686_100015152 451
149 3300025934 Ga0207686_10002919 Ga0207686_100029194 451
150 3300025935 Ga0207709_10008191 Ga0207709_100081912 451
151 3300025942 Ga0207689_10011439 Ga0207689_100114394 451
152 3300026035 Ga0207703_10035996 Ga0207703_100359963 451
153 3300026075 Ga0207708_10055248 Ga0207708_100552482 451
154 3300026118 Ga0207675_100006670 Ga0207675_1000066706 451
155 3300028380 Ga0268265_10048443 Ga0268265_100484432 451
156 3300028573 Ga0265334_10037615 Ga0265334_100376152 451
157 3300045051 Ga0451576_0023679 Ga0451576_0023679_4753_6123 451
158 3300046477 Ga0495664_0069965 Ga0495664_0069965_129_1499 451
159 3300046664 Ga0495659_0019654 Ga0495659_0019654_831_2201 451
160 3300048909 Ga0496106_0043103 Ga0496106_0043103_640_2010 451
161 3300049574 Ga0501038_0009583 Ga0501038_0009583_6830_8197 451
162 3300050512 nmdc:mga0n895_44183_c1 nmdc:mga0n895_44183_c1_1825_3195 451
163 3300050513 nmdc:mga0rr50_4115_c1 nmdc:mga0rr50_4115_c1_2627_3997 451
164 3300050514 nmdc:mga08x19_16_c1 nmdc:mga08x19_16_c1_292829_294199 451
165 3300050515 nmdc:mga0a205_74881_c1 nmdc:mga0a205_74881_c1_1340_2710 451
166 3300049580 Ga0501046_0063398 Ga0501046_0063398_651_2030 452
167 3300049581 Ga0501047_0046763 Ga0501047_0046763_838_2217 452
168 3300060353 Ga0501082_0000029 Ga0501082_0000029_17485_18864 452
169 3300005438 Ga0070701_10040469 Ga0070701_100404692 453
170 3300005440 Ga0070705_100077969 Ga0070705_1000779692 453
171 3300005444 Ga0070694_100001748 Ga0070694_1000017488 453
172 3300005544 Ga0070686_100047800 Ga0070686_1000478002 453
173 3300005549 Ga0070704_100003535 Ga0070704_1000035354 453
174 3300045051 Ga0451576_0308150 Ga0451576_0308150_58_1419 453
175 iso_pu_bacteria 8021622325 8021622339 453
176 iso_pu_bacteria 8021648035 8021650179 453
177 3300005355 Ga0070671_100024563 Ga0070671_1000245633 454
178 3300005367 Ga0070667_100000044 Ga0070667_1000000448 454
179 3300005455 Ga0070663_100001012 Ga0070663_1000010126 454
180 3300005458 Ga0070681_10196360 Ga0070681_101963602 454
181 3300005548 Ga0070665_100139549 Ga0070665_1001395491 454
182 3300005834 Ga0068851_10009776 Ga0068851_100097765 454
183 3300005841 Ga0068863_100033762 Ga0068863_1000337622 454
184 3300009093 Ga0105240_10057397 Ga0105240_100573973 454
185 3300009177 Ga0105248_10004732 Ga0105248_1000473211 454
186 3300009545 Ga0105237_10008066 Ga0105237_100080665 454
187 3300009553 Ga0105249_10003079 Ga0105249_100030794 454
188 3300010375 Ga0105239_10056532 Ga0105239_100565325 454
189 3300025912 Ga0207707_10003134 Ga0207707_100031347 454
190 3300025913 Ga0207695_10040066 Ga0207695_100400664 454
191 3300025914 Ga0207671_10002847 Ga0207671_100028474 454
192 3300025941 Ga0207711_10014652 Ga0207711_100146523 454
193 3300025961 Ga0207712_10008110 Ga0207712_100081103 454
194 3300025986 Ga0207658_10000043 Ga0207658_1000004392 454
195 3300026041 Ga0207639_10224204 Ga0207639_102242042 454
196 3300026067 Ga0207678_10002831 Ga0207678_100028316 454
197 3300026067 Ga0207678_10046774 Ga0207678_100467744 454
198 3300047472 Ga0495686_0014298 Ga0495686_0014298_1343_2740 454
199 3300048917 Ga0496114_0155616 Ga0496114_0155616_394_1779 454
200 3300048921 Ga0496118_0000492 Ga0496118_0000492_48017_49402 454
201 3300048925 Ga0496122_0017637 Ga0496122_0017637_1307_2704 454
202 3300048926 Ga0496123_0002754 Ga0496123_0002754_18052_19449 454
203 3300049569 Ga0501032_0009126 Ga0501032_0009126_1316_2701 454
204 3300049570 Ga0501033_0002950 Ga0501033_0002950_6603_7988 454
205 3300049571 Ga0501034_0003701 Ga0501034_0003701_7322_8707 454
206 3300049571 Ga0501034_0013706 Ga0501034_0013706_4656_6041 454
207 3300049572 Ga0501036_0005625 Ga0501036_0005625_7562_8947 454
208 3300049573 Ga0501037_0001730 Ga0501037_0001730_12960_14345 454
209 3300049573 Ga0501037_0037100 Ga0501037_0037100_580_1965 454
210 3300049574 Ga0501038_0031831 Ga0501038_0031831_1073_2458 454
211 3300049575 Ga0501039_0001283 Ga0501039_0001283_12360_13745 454
212 3300049578 Ga0501042_0008731 Ga0501042_0008731_86_1471 454
213 3300049580 Ga0501046_0027025 Ga0501046_0027025_1768_3153 454
214 3300049581 Ga0501047_0138624 Ga0501047_0138624_84_1469 454
215 3300049581 Ga0501047_0176702 Ga0501047_0176702_259_1644 454
216 3300049582 Ga0501048_0068376 Ga0501048_0068376_103_1488 454
217 3300049583 Ga0501067_0001596 Ga0501067_0001596_2006_3391 454
218 3300049584 Ga0501068_0009311 Ga0501068_0009311_2101_3486 454
219 3300049584 Ga0501068_0057241 Ga0501068_0057241_407_1792 454
220 3300049585 Ga0501069_0005061 Ga0501069_0005061_992_2377 454
221 3300049587 Ga0501071_0000933 Ga0501071_0000933_8484_9869 454
222 3300049588 Ga0501072_0018473 Ga0501072_0018473_2890_4275 454
223 3300049589 Ga0501073_0003807 Ga0501073_0003807_6215_7600 454
224 3300049590 Ga0501074_0029061 Ga0501074_0029061_259_1644 454
225 3300049590 Ga0501074_0102174 Ga0501074_0102174_361_1746 454
226 3300049592 Ga0501076_0074286 Ga0501076_0074286_156_1541 454
227 3300049741 Ga0501079_0058973 Ga0501079_0058973_1309_2694 454
228 3300049743 Ga0501081_0016502 Ga0501081_0016502_2376_3761 454
229 3300049822 Ga0501035_0020726 Ga0501035_0020726_2296_3681 454
230 3300049822 Ga0501035_0087737 Ga0501035_0087737_608_1993 454
231 3300049823 Ga0501044_0006708 Ga0501044_0006708_6538_7923 454
232 3300049823 Ga0501044_0018540 Ga0501044_0018540_793_2178 454
233 3300049824 Ga0501045_0007172 Ga0501045_0007172_2437_3822 454
234 3300053087 Ga0500643_008825 Ga0500643_008825_1514_2911 454
235 3300053120 Ga0500597_000133 Ga0500597_000133_9721_11118 454
236 3300053136 Ga0500559_0027451 Ga0500559_0027451_956_2341 454
237 3300053139 Ga0500568_0001171 Ga0500568_0001171_6821_8206 454
238 3300054114 Ga0501084_0027994 Ga0501084_0027994_2561_3946 454
239 3300005334 Ga0068869_100050052 Ga0068869_1000500522 455
240 3300005719 Ga0068861_100002187 Ga0068861_1000021876 455
241 3300005983 Ga0081540_1008105 Ga0081540_10081052 455
242 3300006237 Ga0097621_100020860 Ga0097621_1000208603 455
243 3300006358 Ga0068871_100042718 Ga0068871_1000427183 455
244 3300009553 Ga0105249_10152971 Ga0105249_101529711 455
245 3300013307 Ga0157372_10010875 Ga0157372_100108754 455
246 3300014969 Ga0157376_10044503 Ga0157376_100445034 455
247 3300025942 Ga0207689_10058613 Ga0207689_100586134 455
248 3300026118 Ga0207675_100007253 Ga0207675_1000072535 455
249 3300048918 Ga0496115_0054538 Ga0496115_0054538_556_1962 455
250 3300048921 Ga0496118_0000352 Ga0496118_0000352_26842_28230 455
251 3300053079 Ga0500610_0000443 Ga0500610_0000443_8309_9697 455
252 3300053093 Ga0500651_0036373 Ga0500651_0036373_1402_2790 455
253 3300005289 Ga0065704_10131085 Ga0065704_101310851 457
254 3300015265 Ga0182005_1013828 Ga0182005_10138282 457
255 3300006871 Ga0075434_100012732 Ga0075434_1000127325 458
256 3300050512 nmdc:mga0n895_17562_c1 nmdc:mga0n895_17562_c1_1433_2842 458
257 3300053093 Ga0500651_0001866 Ga0500651_0001866_1160_2626 462
258 3300005618 Ga0068864_100000778 Ga0068864_10000077813 465
259 3300049593 Ga0501077_0001529 Ga0501077_0001529_5354_6871 467
260 3300000546 LJNas_1000706 LJNas_10007062 470
261 3300005439 Ga0070711_100167379 Ga0070711_1001673791 470
262 3300025915 Ga0207693_10110955 Ga0207693_101109552 470
263 3300048903 Ga0496100_0160325 Ga0496100_0160325_59_1471 470
264 3300048907 Ga0496104_0115983 Ga0496104_0115983_115_1527 470
265 3300048929 Ga0496126_0004906 Ga0496126_0004906_65_1477 470

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00158

Sigma54_activat

Sigma-54 interaction domain

180

347

0.98

PF02954

HTH_8

Bacterial regulatory protein, Fis family

455

496

0.97

PF00072

Response_reg

Response regulator receiver domain

30

145

0.95

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

181

351

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bs1-assembly1.cif.gz_A-1 mub is an aaaplus atpase that forms helical filaments to control target selection for dna transposition 0.9837 342 409
6luf-assembly4.cif.gz_D trans-acting mutant y290a of the central aaa+ domain of the flagellar regulatory protein flrc 0.9679 168 411
4qhs-assembly1.cif.gz_F crystal structure of aaa+sigma 54 activator domain of the flagellar regulatory protein flrc of vibrio cholerae in nucleotide free state 0.9656 168 400
5ep2-assembly1.cif.gz_A quorum-sensing signal integrator luxo - catalytic domain in complex with azau inhibitor 0.9631 168 414
6lua-assembly1.cif.gz_G cis-mutant r349a of the central aaa+ domain of the flagellar regulatory protein flrc 0.9596 168 411
ID Description Score Start End Superfamily
af_Q06065_316_382_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9954 340 404 1.10.8.60
1ny5B03 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9833 342 409 1.10.8.60
1ojlE02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9816 340 408 1.10.8.60
af_P0AFU4_307_384_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9749 340 409 1.10.8.60
af_P07604_193_369_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9744 168 338 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A850NXH2-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.985 169 355 GO:0003677
GO:0005524
GO:0006355
GO:0016887
GO:0032508
AF-A0A7C5Q6C3-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.9827 167 338 GO:0005524
GO:0006355
GO:0016887
AF-A0A257VW85-F1-model_v4 Fis family transcriptional regulator 0.9806 168 382 GO:0005524
GO:0006355
GO:0016887
AF-A0A529FBT6-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.9793 204 326 GO:0005524
GO:0006355
AF-A0A6I1W684-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.9784 279 396 GO:0000160
GO:0005524
GO:0006355

Feature Viewer

pLDDT pTM Quality
85.49 0.57 Medium
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Predicted Structure (AlphaFold2)

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