F373508

General Info

Members Datasets Scaffolds Average Seq Length
265 146 257 351

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0028257|Ga0466963_0028257_2293_3480
Length 389
Sequence LIVCVDPSAGNTSRSGVLATMPGLDADAARVVVVGYGLAGRVFHATLIATTPGLRLAAVVTSSAERAAQARADHDEVAVLGSVDDAIGGGFDLVVVATPNSSHVDLARTALAAGSFVVVDKPLATDAAAARALVAEAGGRLTVFQNRRWDGDFLTVRRLVRDGALGRVVRFESRFDRWRPQITDRWRDRGDPALGGGLLLDLGSHLVDQALTLLGPASRVYAEVERTRAGALADDDVFVAIEHAGGARSHLWASALAGEPGDRFRVLGDAAAYVKRGLDSQEAALRAGARPEPGRPWGIEDHTTWGRLVAGERAEQVPTDPGDYPAFYAAVAAWVAGAAEPAVATAEVLDAARVAAAEHRVVEVAARESSGRAGVRPTAPFRATLEEER

Samples

Sample ID Description Type Environment
1 2582580736 Prauserella sp. Am3 Isolate Unclassified
2 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
3 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
4 2919513703 Luteimonas sp. 3794 Isolate Unclassified
5 2919675420 Luteimonas terrae 4099 Isolate Unclassified
6 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
7 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
8 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
98 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
99 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
100 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
101 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
102 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
103 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
104 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
107 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
108 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
115 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
116 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
117 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
118 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
119 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
120 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
121 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
122 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
123 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
124 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
125 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
126 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
129 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
130 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
131 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
132 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
133 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
134 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
135 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
138 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
141 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
142 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
143 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
144 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
145 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
146 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.98
Metatranscriptomes 0
Isolates 3.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.28
Nodule 0.38
Rhizoplane 3.4
Rhizosphere 89.06
Stem 0
Stem Tuber 0
Unclassified 1.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1001729 3300000549 Bacteria 3202
2 Ga0058692_1000053 3300003856 Bacteria 107166
3 Ga0070658_10017531 3300005327 Bacteria 5729
4 Ga0070676_10026381 3300005328 Bacteria 3290
5 Ga0070683_100001968 3300005329 Bacteria 16088
6 Ga0070683_100031781 3300005329 Bacteria 4804
7 Ga0070670_100000733 3300005331 Bacteria 25485
8 Ga0068869_100000280 3300005334 Bacteria 27001
9 Ga0068869_100035827 3300005334 Bacteria 3520
10 Ga0068868_100176326 3300005338 Bacteria 1772
11 Ga0068868_100351471 3300005338 Bacteria 1262
12 Ga0070660_100178888 3300005339 Unclassified 1716
13 Ga0070691_10086812 3300005341 Bacteria 1538
14 Ga0070661_100008703 3300005344 Bacteria 7023
15 Ga0070661_100012783 3300005344 Bacteria 5879
16 Ga0070661_100032482 3300005344 Unclassified 3779
17 Ga0070661_100120710 3300005344 Bacteria 1963
18 Ga0070671_100051956 3300005355 Bacteria 3409
19 Ga0070667_100000267 3300005367 Bacteria 59181
20 Ga0070714_100154208 3300005435 Bacteria 2072
21 Ga0070713_100129677 3300005436 Unclassified 2222
22 Ga0070713_100154255 3300005436 Bacteria 2046
23 Ga0070711_100279972 3300005439 Bacteria 1319
24 Ga0070684_100031457 3300005535 Bacteria 4518
25 Ga0070684_100031825 3300005535 Bacteria 4493
26 Ga0070684_100078159 3300005535 Unclassified 2923
27 Ga0070684_100105451 3300005535 Bacteria 2522
28 Ga0068853_100000656 3300005539 Bacteria 23758
29 Ga0068853_100149909 3300005539 Unclassified 2099
30 Ga0070672_100158072 3300005543 Bacteria 1878
31 Ga0070665_100024899 3300005548 Bacteria 6031
32 Ga0070665_100111085 3300005548 Unclassified 2744
33 Ga0068855_100001189 3300005563 Bacteria 32372
34 Ga0068855_100002483 3300005563 Bacteria 22740
35 Ga0068855_100019001 3300005563 Bacteria 8262
36 Ga0068855_100082540 3300005563 Unclassified 3725
37 Ga0070664_100041570 3300005564 Bacteria 3880
38 Ga0070664_100098428 3300005564 Bacteria 2541
39 Ga0068857_100003203 3300005577 Bacteria 13575
40 Ga0068857_100014140 3300005577 Bacteria 6951
41 Ga0068854_100031837 3300005578 Bacteria 3667
42 Ga0068856_100000382 3300005614 Bacteria 48530
43 Ga0068856_100013765 3300005614 Bacteria 7820
44 Ga0068856_100059294 3300005614 Bacteria 3781
45 Ga0068856_100060360 3300005614 Bacteria 3746
46 Ga0068852_100000003 3300005616 Bacteria 246525
47 Ga0068852_100000361 3300005616 Bacteria 30684
48 Ga0068852_100401203 3300005616 Bacteria 1349
49 Ga0068859_100001218 3300005617 Bacteria 26254
50 Ga0068864_100000506 3300005618 Bacteria 33582
51 Ga0068864_100279797 3300005618 Bacteria 1557
52 Ga0068851_10020939 3300005834 Bacteria 3172
53 Ga0068851_10053751 3300005834 Bacteria 2051
54 Ga0068851_10058010 3300005834 Unclassified 1977
55 Ga0068851_10070162 3300005834 Unclassified 1812
56 Ga0068858_100010420 3300005842 Bacteria 8806
57 Ga0068858_100271623 3300005842 Bacteria 1613
58 Ga0068862_100173695 3300005844 Unclassified 1930
59 Ga0075364_10034774 3300006051 Bacteria 3254
60 Ga0075364_10151003 3300006051 Bacteria 1566
61 Ga0097621_100026197 3300006237 Bacteria 4571
62 Ga0097621_100028806 3300006237 Bacteria 4380
63 Ga0097621_100036641 3300006237 Bacteria 3925
64 Ga0068871_100000192 3300006358 Bacteria 41912
65 Ga0068871_100008433 3300006358 Bacteria 7413
66 Ga0097620_100001218 3300006931 Bacteria 26254
67 Ga0105240_10000249 3300009093 Bacteria 107168
68 Ga0105240_10004290 3300009093 Bacteria 21785
69 Ga0105240_10004782 3300009093 Bacteria 20427
70 Ga0105240_10005280 3300009093 Bacteria 19287
71 Ga0105240_10010390 3300009093 Bacteria 13084
72 Ga0105240_10025559 3300009093 Bacteria 7756
73 Ga0105240_10098599 3300009093 Bacteria 3558
74 Ga0105240_10156122 3300009093 Bacteria 2713
75 Ga0105245_10002683 3300009098 Bacteria 16011
76 Ga0105247_10012876 3300009101 Bacteria 5020
77 Ga0105247_10043808 3300009101 Bacteria 2742
78 Ga0105241_10000036 3300009174 Bacteria 115495
79 Ga0105241_10000356 3300009174 Bacteria 34723
80 Ga0105241_10001077 3300009174 Bacteria 20818
81 Ga0105241_10027178 3300009174 Unclassified 4260
82 Ga0105248_10000004 3300009177 Bacteria 695244
83 Ga0105248_10001175 3300009177 Bacteria 29272
84 Ga0105237_10004629 3300009545 Bacteria 15849
85 Ga0105237_10005330 3300009545 Bacteria 14544
86 Ga0105237_10012156 3300009545 Bacteria 9081
87 Ga0105237_10041279 3300009545 Bacteria 4653
88 Ga0105237_10155507 3300009545 Bacteria 2283
89 Ga0105237_10292821 3300009545 Unclassified 1631
90 Ga0105238_10000088 3300009551 Bacteria 103463
91 Ga0105238_10002079 3300009551 Bacteria 20241
92 Ga0105238_10003465 3300009551 Bacteria 15698
93 Ga0105238_10019475 3300009551 Bacteria 6911
94 Ga0105238_10114457 3300009551 Unclassified 2676
95 Ga0105238_10325947 3300009551 Unclassified 1522
96 Ga0105249_10405665 3300009553 Bacteria 1394
97 Ga0105239_10004026 3300010375 Bacteria 17797
98 Ga0105239_10009210 3300010375 Bacteria 11166
99 Ga0105239_10046888 3300010375 Bacteria 4735
100 Ga0105239_10285194 3300010375 Bacteria 1859
101 Ga0105246_10001970 3300011119 Bacteria 12386
102 Ga0157373_10292086 3300013100 Unclassified 1156
103 Ga0157370_10000001 3300013104 Bacteria 529517
104 Ga0157369_10000073 3300013105 Bacteria 139083
105 Ga0157369_10010881 3300013105 Bacteria 10363
106 Ga0157369_10019484 3300013105 Bacteria 7592
107 Ga0157369_10027579 3300013105 Bacteria 6293
108 Ga0157369_10046662 3300013105 Bacteria 4708
109 Ga0157374_10011141 3300013296 Bacteria 7773
110 Ga0157374_10092044 3300013296 Bacteria 2892
111 Ga0157374_10182932 3300013296 Bacteria 2048
112 Ga0157378_10010755 3300013297 Bacteria 8000
113 Ga0157378_10065730 3300013297 Bacteria 3246
114 Ga0157378_10091504 3300013297 Bacteria 2766
115 Ga0163162_10033792 3300013306 Bacteria 5084
116 Ga0163162_10277186 3300013306 Bacteria 1809
117 Ga0157372_10000045 3300013307 Bacteria 151277
118 Ga0157372_10015685 3300013307 Bacteria 8125
119 Ga0157372_10027977 3300013307 Bacteria 6147
120 Ga0157372_10059001 3300013307 Bacteria 4291
121 Ga0157372_10069429 3300013307 Unclassified 3963
122 Ga0157372_10103363 3300013307 Bacteria 3255
123 Ga0157375_10008594 3300013308 Bacteria 8942
124 Ga0163163_10001028 3300014325 Bacteria 23642
125 Ga0163163_10024906 3300014325 Bacteria 5698
126 Ga0157379_10000305 3300014968 Bacteria 38880
127 Ga0157379_10025404 3300014968 Bacteria 5262
128 Ga0163161_10029085 3300017792 Bacteria 3927
129 Ga0207656_10016135 3300025321 Unclassified 2903
130 Ga0207656_10049582 3300025321 Bacteria 1811
131 Ga0207710_10007839 3300025900 Bacteria 4521
132 Ga0207680_10196514 3300025903 Bacteria 1372
133 Ga0207647_10091670 3300025904 Bacteria 1812
134 Ga0207654_10000052 3300025911 Bacteria 84058
135 Ga0207654_10001017 3300025911 Bacteria 15347
136 Ga0207654_10098737 3300025911 Bacteria 1795
137 Ga0207654_10113450 3300025911 Unclassified 1690
138 Ga0207654_10271356 3300025911 Bacteria 1144
139 Ga0207695_10000026 3300025913 Bacteria 624558
140 Ga0207695_10000063 3300025913 Bacteria 349527
141 Ga0207695_10000538 3300025913 Bacteria 79042
142 Ga0207695_10002072 3300025913 Bacteria 30560
143 Ga0207695_10010771 3300025913 Bacteria 11151
144 Ga0207695_10011816 3300025913 Bacteria 10536
145 Ga0207695_10025531 3300025913 Bacteria 6612
146 Ga0207695_10097379 3300025913 Bacteria 2943
147 Ga0207695_10102357 3300025913 Bacteria 2857
148 Ga0207671_10000430 3300025914 Bacteria 57899
149 Ga0207671_10001318 3300025914 Bacteria 29039
150 Ga0207663_10156254 3300025916 Bacteria 1605
151 Ga0207649_10002426 3300025920 Bacteria 10438
152 Ga0207649_10120352 3300025920 Bacteria 1769
153 Ga0207694_10000028 3300025924 Bacteria 242395
154 Ga0207694_10000513 3300025924 Bacteria 35098
155 Ga0207694_10019544 3300025924 Bacteria 5121
156 Ga0207694_10029739 3300025924 Bacteria 4169
157 Ga0207687_10002394 3300025927 Bacteria 12710
158 Ga0207664_10141865 3300025929 Unclassified 2033
159 Ga0207706_10004680 3300025933 Bacteria 12827
160 Ga0207665_10073779 3300025939 Bacteria 2334
161 Ga0207691_10011127 3300025940 Bacteria 8636
162 Ga0207711_10000008 3300025941 Bacteria 597686
163 Ga0207711_10000010 3300025941 Bacteria 557970
164 Ga0207689_10001955 3300025942 Bacteria 19492
165 Ga0207689_10045572 3300025942 Bacteria 3625
166 Ga0207661_10014910 3300025944 Bacteria 5704
167 Ga0207661_10089639 3300025944 Unclassified 2559
168 Ga0207661_10110310 3300025944 Bacteria 2326
169 Ga0207679_10022929 3300025945 Bacteria 4259
170 Ga0207667_10022150 3300025949 Bacteria 7028
171 Ga0207667_10025664 3300025949 Bacteria 6448
172 Ga0207640_10019475 3300025981 Bacteria 4010
173 Ga0207658_10000163 3300025986 Bacteria 70810
174 Ga0207677_10000076 3300026023 Bacteria 81764
175 Ga0207677_10181312 3300026023 Bacteria 1657
176 Ga0207639_10000043 3300026041 Bacteria 140295
177 Ga0207639_10141907 3300026041 Unclassified 2002
178 Ga0207702_10000834 3300026078 Bacteria 32311
179 Ga0207702_10002694 3300026078 Bacteria 16676
180 Ga0207702_10051611 3300026078 Bacteria 3477
181 Ga0207702_10138015 3300026078 Bacteria 2202
182 Ga0207641_10005197 3300026088 Bacteria 11131
183 Ga0207676_10015278 3300026095 Bacteria 5537
184 Ga0207676_10320480 3300026095 Unclassified 1423
185 Ga0207674_10020568 3300026116 Bacteria 7125
186 Ga0207683_10001424 3300026121 Bacteria 21623
187 Ga0207698_10000046 3300026142 Bacteria 93146
188 Ga0207698_10000068 3300026142 Bacteria 69581
189 Ga0207698_10466269 3300026142 Bacteria 1222
190 Ga0209371_1000018 3300027312 Bacteria 614700
191 Ga0268266_10051878 3300028379 Bacteria 3522
192 Ga0268265_10195982 3300028380 Bacteria 1748
193 Ga0268264_10001709 3300028381 Bacteria 20235
194 Ga0268264_10108462 3300028381 Bacteria 2427
195 Ga0268256_1000016 3300030500 Bacteria 614700
196 Ga0316182_1114664 3300030745 Bacteria 3365
197 Ga0265328_10020591 3300031239 Bacteria 2523
198 Ga0265325_10062154 3300031241 Bacteria 1892
199 Ga0265325_10065706 3300031241 Bacteria 1831
200 Ga0265340_10010948 3300031247 Bacteria 4840
201 Ga0265339_10034246 3300031249 Unclassified 2855
202 Ga0265316_10086555 3300031344 Bacteria 2395
203 Ga0307408_100010151 3300031548 Bacteria 6211
204 Ga0265314_10034551 3300031711 Bacteria 3695
205 Ga0265342_10026717 3300031712 Bacteria 3615
206 Ga0316576_10001756 3300031727 Bacteria 11966
207 Ga0316578_10013985 3300031728 Bacteria 4271
208 Ga0395899_0037819 3300037312 Bacteria 3617
209 Ga0395900_0097631 3300037418 Bacteria 3018
210 Ga0395898_0001730 3300037466 Bacteria 28869
211 Ga0395905_0009121 3300037471 Bacteria 9718
212 Ga0395901_0004088 3300038443 Bacteria 14703
213 Ga0439436_0000805 3300041404 Bacteria 8492
214 Ga0439439_0004783 3300041406 Bacteria 3068
215 Ga0439466_0010078 3300041411 Bacteria 3514
216 Ga0439466_0064289 3300041411 Bacteria 1176
217 Ga0439433_0000292 3300041999 Bacteria 8625
218 Ga0439442_002637 3300042002 Bacteria 3519
219 Ga0439449_0000036 3300042007 Bacteria 39721
220 Ga0439457_002670 3300042014 Bacteria 5027
221 Ga0466963_0028257 3300044694 Bacteria 3599
222 Ga0466967_0002598 3300045976 Bacteria 11349
223 Ga0495580_0026321 3300046472 Bacteria 4242
224 Ga0495580_0175563 3300046472 Bacteria 1480
225 Ga0495628_0087408 3300046516 Bacteria 2417
226 Ga0495587_0019036 3300046536 Bacteria 4254
227 Ga0495645_0014256 3300046543 Bacteria 5637
228 Ga0495645_0143477 3300046543 Bacteria 1664
229 Ga0495668_0126029 3300046616 Bacteria 1402
230 Ga0495588_0030290 3300046674 Bacteria 2719
231 Ga0495599_0149361 3300046678 Bacteria 1448
232 Ga0495613_0182894 3300046689 Bacteria 1484
233 Ga0495674_0178008 3300047319 Bacteria 1772
234 Ga0495680_0290638 3300047322 Bacteria 1150
235 Ga0495686_0000018 3300047472 Bacteria 434962
236 Ga0496102_0247511 3300048905 Bacteria 1680
237 Ga0496103_0080874 3300048906 Bacteria 2043
238 Ga0496104_0000032 3300048907 Bacteria 191998
239 Ga0496105_0039337 3300048908 Bacteria 3898
240 Ga0496107_0107073 3300048910 Bacteria 2054
241 Ga0496112_0193966 3300048915 Bacteria 1992
242 Ga0496114_0009202 3300048917 Bacteria 7835
243 Ga0496115_0202183 3300048918 Unclassified 1641
244 Ga0496115_0258007 3300048918 Bacteria 1434
245 nmdc:mga00v17_150868_c1 3300050491 Bacteria 1494
246 nmdc:mga00v17_160074_c1 3300050491 Bacteria 1449
247 nmdc:mga00v17_220931_c1 3300050491 Bacteria 1227
248 nmdc:mga00v17_27872_c1 3300050491 Bacteria 3302
249 nmdc:mga00v17_28871_c1 3300050491 Bacteria 3252
250 nmdc:mga00v17_56585_c1 3300050491 Bacteria 2398
251 nmdc:mga00v17_66236_c1 3300050491 Bacteria 2230
252 nmdc:mga00v17_86830_c1 3300050491 Bacteria 1961
253 Ga0495601_0133928 3300053077 Bacteria 1615
254 Ga0500559_0000001 3300053136 Bacteria 325464
255 Ga0500573_0007144 3300053140 Bacteria 6076
256 Ga0500573_0025310 3300053140 Bacteria 3412
257 Ga0500573_0056354 3300053140 Bacteria 2256

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300041411 Ga0439466_0010078 Ga0439466_0010078_2607_3494 295
2 3300047322 Ga0495680_0290638 Ga0495680_0290638_54_1091 302
3 3300009551 Ga0105238_10019475 Ga0105238_100194753 313
4 3300010375 Ga0105239_10285194 Ga0105239_102851942 313
5 3300013105 Ga0157369_10019484 Ga0157369_100194842 313
6 3300013307 Ga0157372_10069429 Ga0157372_100694292 313
7 3300005614 Ga0068856_100059294 Ga0068856_1000592942 314
8 3300037312 Ga0395899_0037819 Ga0395899_0037819_1144_2256 319
9 3300037471 Ga0395905_0009121 Ga0395905_0009121_4821_5933 319
10 3300038443 Ga0395901_0004088 Ga0395901_0004088_4767_5879 319
11 3300005563 Ga0068855_100019001 Ga0068855_1000190012 321
12 3300005614 Ga0068856_100060360 Ga0068856_1000603602 321
13 3300009093 Ga0105240_10025559 Ga0105240_100255593 321
14 3300013105 Ga0157369_10010881 Ga0157369_100108816 321
15 3300013307 Ga0157372_10015685 Ga0157372_100156856 321
16 3300025911 Ga0207654_10271356 Ga0207654_102713561 321
17 3300025913 Ga0207695_10025531 Ga0207695_100255312 321
18 3300025949 Ga0207667_10022150 Ga0207667_100221506 321
19 3300026078 Ga0207702_10051611 Ga0207702_100516112 321
20 3300005329 Ga0070683_100031781 Ga0070683_1000317812 323
21 3300005535 Ga0070684_100031457 Ga0070684_1000314574 323
22 3300005564 Ga0070664_100098428 Ga0070664_1000984282 323
23 3300005577 Ga0068857_100003203 Ga0068857_1000032033 323
24 3300005614 Ga0068856_100013765 Ga0068856_1000137652 323
25 3300005616 Ga0068852_100401203 Ga0068852_1004012032 323
26 3300005834 Ga0068851_10020939 Ga0068851_100209393 323
27 3300025924 Ga0207694_10029739 Ga0207694_100297393 323
28 3300026023 Ga0207677_10181312 Ga0207677_101813122 323
29 3300026078 Ga0207702_10138015 Ga0207702_101380152 323
30 3300026142 Ga0207698_10466269 Ga0207698_104662692 323
31 3300031727 Ga0316576_10001756 Ga0316576_1000175613 323
32 3300031728 Ga0316578_10013985 Ga0316578_100139853 323
33 3300053136 Ga0500559_0000001 Ga0500559_0000001_77747_78772 323
34 3300037418 Ga0395900_0097631 Ga0395900_0097631_557_1627 324
35 3300037466 Ga0395898_0001730 Ga0395898_0001730_12709_13779 324
36 3300009093 Ga0105240_10156122 Ga0105240_101561223 328
37 3300009177 Ga0105248_10000004 Ga0105248_10000004207 328
38 3300009177 Ga0105248_10001175 Ga0105248_1000117512 328
39 3300025913 Ga0207695_10102357 Ga0207695_101023573 328
40 3300025941 Ga0207711_10000008 Ga0207711_10000008298 328
41 3300025941 Ga0207711_10000010 Ga0207711_10000010180 328
42 3300031241 Ga0265325_10065706 Ga0265325_100657062 328
43 3300005327 Ga0070658_10017531 Ga0070658_100175315 329
44 3300005328 Ga0070676_10026381 Ga0070676_100263813 329
45 3300005329 Ga0070683_100001968 Ga0070683_10000196810 329
46 3300005331 Ga0070670_100000733 Ga0070670_10000073320 329
47 3300005334 Ga0068869_100000280 Ga0068869_10000028024 329
48 3300005334 Ga0068869_100035827 Ga0068869_1000358272 329
49 3300005338 Ga0068868_100351471 Ga0068868_1003514712 329
50 3300005339 Ga0070660_100178888 Ga0070660_1001788882 329
51 3300005341 Ga0070691_10086812 Ga0070691_100868122 329
52 3300005344 Ga0070661_100008703 Ga0070661_1000087035 329
53 3300005344 Ga0070661_100012783 Ga0070661_1000127834 329
54 3300005344 Ga0070661_100032482 Ga0070661_1000324823 329
55 3300005344 Ga0070661_100120710 Ga0070661_1001207102 329
56 3300005355 Ga0070671_100051956 Ga0070671_1000519562 329
57 3300005367 Ga0070667_100000267 Ga0070667_10000026735 329
58 3300005436 Ga0070713_100129677 Ga0070713_1001296772 329
59 3300005439 Ga0070711_100279972 Ga0070711_1002799721 329
60 3300005535 Ga0070684_100031825 Ga0070684_1000318252 329
61 3300005535 Ga0070684_100078159 Ga0070684_1000781591 329
62 3300005535 Ga0070684_100105451 Ga0070684_1001054512 329
63 3300005539 Ga0068853_100000656 Ga0068853_1000006568 329
64 3300005539 Ga0068853_100149909 Ga0068853_1001499092 329
65 3300005543 Ga0070672_100158072 Ga0070672_1001580722 329
66 3300005548 Ga0070665_100024899 Ga0070665_1000248996 329
67 3300005548 Ga0070665_100111085 Ga0070665_1001110853 329
68 3300005563 Ga0068855_100001189 Ga0068855_1000011896 329
69 3300005563 Ga0068855_100002483 Ga0068855_1000024832 329
70 3300005563 Ga0068855_100082540 Ga0068855_1000825402 329
71 3300005564 Ga0070664_100041570 Ga0070664_1000415703 329
72 3300005577 Ga0068857_100014140 Ga0068857_1000141408 329
73 3300005578 Ga0068854_100031837 Ga0068854_1000318373 329
74 3300005614 Ga0068856_100000382 Ga0068856_10000038224 329
75 3300005616 Ga0068852_100000003 Ga0068852_100000003112 329
76 3300005616 Ga0068852_100000361 Ga0068852_1000003613 329
77 3300005617 Ga0068859_100001218 Ga0068859_10000121814 329
78 3300005618 Ga0068864_100000506 Ga0068864_10000050622 329
79 3300005618 Ga0068864_100279797 Ga0068864_1002797972 329
80 3300005834 Ga0068851_10053751 Ga0068851_100537512 329
81 3300005834 Ga0068851_10058010 Ga0068851_100580103 329
82 3300005834 Ga0068851_10070162 Ga0068851_100701622 329
83 3300005842 Ga0068858_100010420 Ga0068858_1000104208 329
84 3300005842 Ga0068858_100271623 Ga0068858_1002716232 329
85 3300005844 Ga0068862_100173695 Ga0068862_1001736953 329
86 3300006237 Ga0097621_100026197 Ga0097621_1000261976 329
87 3300006237 Ga0097621_100028806 Ga0097621_1000288062 329
88 3300006237 Ga0097621_100036641 Ga0097621_1000366412 329
89 3300006358 Ga0068871_100000192 Ga0068871_10000019243 329
90 3300006358 Ga0068871_100008433 Ga0068871_1000084332 329
91 3300006931 Ga0097620_100001218 Ga0097620_10000121814 329
92 3300009093 Ga0105240_10000249 Ga0105240_1000024978 329
93 3300009093 Ga0105240_10004290 Ga0105240_1000429014 329
94 3300009093 Ga0105240_10004782 Ga0105240_100047826 329
95 3300009093 Ga0105240_10005280 Ga0105240_100052806 329
96 3300009093 Ga0105240_10010390 Ga0105240_100103909 329
97 3300009093 Ga0105240_10098599 Ga0105240_100985992 329
98 3300009098 Ga0105245_10002683 Ga0105245_100026833 329
99 3300009101 Ga0105247_10012876 Ga0105247_100128763 329
100 3300009101 Ga0105247_10043808 Ga0105247_100438082 329
101 3300009174 Ga0105241_10000036 Ga0105241_1000003684 329
102 3300009174 Ga0105241_10000356 Ga0105241_1000035613 329
103 3300009174 Ga0105241_10001077 Ga0105241_100010776 329
104 3300009174 Ga0105241_10027178 Ga0105241_100271782 329
105 3300009545 Ga0105237_10004629 Ga0105237_100046293 329
106 3300009545 Ga0105237_10005330 Ga0105237_1000533014 329
107 3300009545 Ga0105237_10012156 Ga0105237_100121569 329
108 3300009545 Ga0105237_10041279 Ga0105237_100412792 329
109 3300009545 Ga0105237_10155507 Ga0105237_101555072 329
110 3300009545 Ga0105237_10292821 Ga0105237_102928212 329
111 3300009551 Ga0105238_10000088 Ga0105238_1000008891 329
112 3300009551 Ga0105238_10002079 Ga0105238_100020797 329
113 3300009551 Ga0105238_10003465 Ga0105238_1000346515 329
114 3300009551 Ga0105238_10114457 Ga0105238_101144572 329
115 3300009551 Ga0105238_10325947 Ga0105238_103259472 329
116 3300010375 Ga0105239_10004026 Ga0105239_1000402611 329
117 3300010375 Ga0105239_10009210 Ga0105239_100092103 329
118 3300010375 Ga0105239_10046888 Ga0105239_100468883 329
119 3300011119 Ga0105246_10001970 Ga0105246_1000197010 329
120 3300013100 Ga0157373_10292086 Ga0157373_102920861 329
121 3300013104 Ga0157370_10000001 Ga0157370_10000001335 329
122 3300013105 Ga0157369_10000073 Ga0157369_1000007359 329
123 3300013105 Ga0157369_10027579 Ga0157369_100275792 329
124 3300013105 Ga0157369_10046662 Ga0157369_100466623 329
125 3300013296 Ga0157374_10011141 Ga0157374_100111413 329
126 3300013296 Ga0157374_10092044 Ga0157374_100920442 329
127 3300013296 Ga0157374_10182932 Ga0157374_101829322 329
128 3300013297 Ga0157378_10010755 Ga0157378_100107556 329
129 3300013297 Ga0157378_10065730 Ga0157378_100657302 329
130 3300013297 Ga0157378_10091504 Ga0157378_100915042 329
131 3300013306 Ga0163162_10033792 Ga0163162_100337923 329
132 3300013306 Ga0163162_10277186 Ga0163162_102771862 329
133 3300013307 Ga0157372_10000045 Ga0157372_10000045121 329
134 3300013307 Ga0157372_10027977 Ga0157372_100279772 329
135 3300013307 Ga0157372_10059001 Ga0157372_100590013 329
136 3300013307 Ga0157372_10103363 Ga0157372_101033633 329
137 3300013308 Ga0157375_10008594 Ga0157375_100085948 329
138 3300014325 Ga0163163_10001028 Ga0163163_100010282 329
139 3300014325 Ga0163163_10024906 Ga0163163_100249067 329
140 3300014968 Ga0157379_10000305 Ga0157379_1000030524 329
141 3300014968 Ga0157379_10025404 Ga0157379_100254046 329
142 3300017792 Ga0163161_10029085 Ga0163161_100290854 329
143 3300025321 Ga0207656_10016135 Ga0207656_100161353 329
144 3300025321 Ga0207656_10049582 Ga0207656_100495822 329
145 3300025900 Ga0207710_10007839 Ga0207710_100078393 329
146 3300025903 Ga0207680_10196514 Ga0207680_101965142 329
147 3300025904 Ga0207647_10091670 Ga0207647_100916702 329
148 3300025911 Ga0207654_10000052 Ga0207654_1000005259 329
149 3300025911 Ga0207654_10001017 Ga0207654_100010173 329
150 3300025911 Ga0207654_10098737 Ga0207654_100987372 329
151 3300025911 Ga0207654_10113450 Ga0207654_101134502 329
152 3300025913 Ga0207695_10000026 Ga0207695_10000026231 329
153 3300025913 Ga0207695_10000063 Ga0207695_10000063175 329
154 3300025913 Ga0207695_10000538 Ga0207695_1000053834 329
155 3300025913 Ga0207695_10002072 Ga0207695_1000207223 329
156 3300025913 Ga0207695_10010771 Ga0207695_100107714 329
157 3300025913 Ga0207695_10011816 Ga0207695_100118167 329
158 3300025913 Ga0207695_10097379 Ga0207695_100973792 329
159 3300025914 Ga0207671_10000430 Ga0207671_100004303 329
160 3300025914 Ga0207671_10001318 Ga0207671_1000131814 329
161 3300025916 Ga0207663_10156254 Ga0207663_101562542 329
162 3300025920 Ga0207649_10002426 Ga0207649_100024262 329
163 3300025920 Ga0207649_10120352 Ga0207649_101203522 329
164 3300025924 Ga0207694_10000028 Ga0207694_1000002824 329
165 3300025924 Ga0207694_10000513 Ga0207694_1000051310 329
166 3300025924 Ga0207694_10019544 Ga0207694_100195442 329
167 3300025927 Ga0207687_10002394 Ga0207687_100023943 329
168 3300025933 Ga0207706_10004680 Ga0207706_100046809 329
169 3300025940 Ga0207691_10011127 Ga0207691_100111272 329
170 3300025942 Ga0207689_10001955 Ga0207689_1000195515 329
171 3300025942 Ga0207689_10045572 Ga0207689_100455723 329
172 3300025944 Ga0207661_10014910 Ga0207661_100149103 329
173 3300025944 Ga0207661_10089639 Ga0207661_100896392 329
174 3300025944 Ga0207661_10110310 Ga0207661_101103103 329
175 3300025945 Ga0207679_10022929 Ga0207679_100229293 329
176 3300025949 Ga0207667_10025664 Ga0207667_100256642 329
177 3300025981 Ga0207640_10019475 Ga0207640_100194752 329
178 3300025986 Ga0207658_10000163 Ga0207658_1000016353 329
179 3300026023 Ga0207677_10000076 Ga0207677_1000007653 329
180 3300026041 Ga0207639_10000043 Ga0207639_10000043104 329
181 3300026041 Ga0207639_10141907 Ga0207639_101419072 329
182 3300026078 Ga0207702_10000834 Ga0207702_1000083422 329
183 3300026078 Ga0207702_10002694 Ga0207702_1000269415 329
184 3300026088 Ga0207641_10005197 Ga0207641_100051976 329
185 3300026095 Ga0207676_10015278 Ga0207676_100152783 329
186 3300026095 Ga0207676_10320480 Ga0207676_103204802 329
187 3300026116 Ga0207674_10020568 Ga0207674_100205687 329
188 3300026121 Ga0207683_10001424 Ga0207683_100014248 329
189 3300026142 Ga0207698_10000046 Ga0207698_1000004666 329
190 3300026142 Ga0207698_10000068 Ga0207698_1000006861 329
191 3300028379 Ga0268266_10051878 Ga0268266_100518783 329
192 3300028380 Ga0268265_10195982 Ga0268265_101959822 329
193 3300028381 Ga0268264_10001709 Ga0268264_1000170914 329
194 3300028381 Ga0268264_10108462 Ga0268264_101084622 329
195 3300031711 Ga0265314_10034551 Ga0265314_100345512 329
196 3300045976 Ga0466967_0002598 Ga0466967_0002598_2288_3349 329
197 3300046516 Ga0495628_0087408 Ga0495628_0087408_634_1695 329
198 3300046536 Ga0495587_0019036 Ga0495587_0019036_2868_3929 329
199 3300046543 Ga0495645_0014256 Ga0495645_0014256_983_2044 329
200 3300046678 Ga0495599_0149361 Ga0495599_0149361_78_1139 329
201 3300046689 Ga0495613_0182894 Ga0495613_0182894_114_1175 329
202 3300047319 Ga0495674_0178008 Ga0495674_0178008_572_1633 329
203 3300048908 Ga0496105_0039337 Ga0496105_0039337_2535_3596 329
204 3300048910 Ga0496107_0107073 Ga0496107_0107073_551_1612 329
205 3300048917 Ga0496114_0009202 Ga0496114_0009202_4353_5414 329
206 3300048918 Ga0496115_0258007 Ga0496115_0258007_345_1406 329
207 3300053077 Ga0495601_0133928 Ga0495601_0133928_338_1399 329
208 3300031241 Ga0265325_10062154 Ga0265325_100621542 330
209 iso_pu_bacteria 2919513703 2919514379 330
210 iso_pu_bacteria 2919675420 2919677677 330
211 3300031247 Ga0265340_10010948 Ga0265340_100109482 332
212 3300031249 Ga0265339_10034246 Ga0265339_100342461 332
213 3300031344 Ga0265316_10086555 Ga0265316_100865552 332
214 3300031712 Ga0265342_10026717 Ga0265342_100267172 332
215 3300044694 Ga0466963_0028257 Ga0466963_0028257_2293_3480 333
216 3300003856 Ga0058692_1000053 Ga0058692_100005378 334
217 3300005435 Ga0070714_100154208 Ga0070714_1001542082 334
218 3300005436 Ga0070713_100154255 Ga0070713_1001542552 334
219 3300006051 Ga0075364_10151003 Ga0075364_101510031 334
220 3300025929 Ga0207664_10141865 Ga0207664_101418652 334
221 3300027312 Ga0209371_1000018 Ga0209371_1000018540 334
222 3300030500 Ga0268256_1000016 Ga0268256_1000016540 334
223 3300041404 Ga0439436_0000805 Ga0439436_0000805_3168_4181 334
224 3300041406 Ga0439439_0004783 Ga0439439_0004783_1662_2675 334
225 3300041411 Ga0439466_0064289 Ga0439466_0064289_63_1076 334
226 3300041999 Ga0439433_0000292 Ga0439433_0000292_7279_8292 334
227 3300042007 Ga0439449_0000036 Ga0439449_0000036_6084_7097 334
228 3300042014 Ga0439457_002670 Ga0439457_002670_3751_4764 334
229 3300050491 nmdc:mga00v17_160074_c1 nmdc:mga00v17_160074_c1_200_1240 334
230 3300050491 nmdc:mga00v17_56585_c1 nmdc:mga00v17_56585_c1_865_1905 334
231 3300006051 Ga0075364_10034774 Ga0075364_100347743 335
232 3300025939 Ga0207665_10073779 Ga0207665_100737792 335
233 3300050491 nmdc:mga00v17_150868_c1 nmdc:mga00v17_150868_c1_124_1176 335
234 3300050491 nmdc:mga00v17_220931_c1 nmdc:mga00v17_220931_c1_136_1182 335
235 3300050491 nmdc:mga00v17_27872_c1 nmdc:mga00v17_27872_c1_518_1570 335
236 3300050491 nmdc:mga00v17_28871_c1 nmdc:mga00v17_28871_c1_2083_3129 335
237 3300050491 nmdc:mga00v17_66236_c1 nmdc:mga00v17_66236_c1_96_1148 335
238 3300050491 nmdc:mga00v17_86830_c1 nmdc:mga00v17_86830_c1_200_1246 335
239 iso_pu_bacteria 2582580736 2583152888 335
240 iso_pu_bacteria 2582580736 2583153022 335
241 3300047472 Ga0495686_0000018 Ga0495686_0000018_125414_126514 336
242 3300048907 Ga0496104_0000032 Ga0496104_0000032_56761_57861 336
243 iso_pu_bacteria 2939657138 2939658269 337
244 3300048918 Ga0496115_0202183 Ga0496115_0202183_480_1574 338
245 iso_pu_bacteria 2855670206 2855674524 338
246 iso_pu_bacteria 8003870546 8003872882 338
247 3300009553 Ga0105249_10405665 Ga0105249_104056651 339
248 3300030745 Ga0316182_1114664 Ga0316182_11146642 339
249 3300053140 Ga0500573_0007144 Ga0500573_0007144_2633_3673 339
250 iso_pu_bacteria 2870622029 2870623777 339
251 3300031239 Ga0265328_10020591 Ga0265328_100205912 340
252 3300005338 Ga0068868_100176326 Ga0068868_1001763262 342
253 3300053140 Ga0500573_0025310 Ga0500573_0025310_1650_2708 342
254 3300053140 Ga0500573_0056354 Ga0500573_0056354_645_1706 342
255 3300046472 Ga0495580_0026321 Ga0495580_0026321_1292_2338 348
256 3300046472 Ga0495580_0175563 Ga0495580_0175563_251_1297 348
257 3300046543 Ga0495645_0143477 Ga0495645_0143477_79_1125 348
258 3300048905 Ga0496102_0247511 Ga0496102_0247511_278_1324 348
259 3300048906 Ga0496103_0080874 Ga0496103_0080874_95_1141 348
260 3300048915 Ga0496112_0193966 Ga0496112_0193966_611_1657 348
261 3300046616 Ga0495668_0126029 Ga0495668_0126029_259_1311 350
262 3300046674 Ga0495588_0030290 Ga0495588_0030290_1558_2625 350
263 3300000549 LJQas_1001729 LJQas_10017292 351
264 3300031548 Ga0307408_100010151 Ga0307408_1000101512 351
265 3300042002 Ga0439442_002637 Ga0439442_002637_1398_2483 351

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

153

274

0.97

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

29

146

0.95

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

157

363

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3e82-assembly2.cif.gz_E crystal structure of a putative oxidoreductase from klebsiella pneumoniae 0.9442 9 351
3gfg-assembly3.cif.gz_E structure of putative oxidoreductase yvaa from bacillus subtilis in triclinic form 0.9424 4 349
3gfg-assembly1.cif.gz_B structure of putative oxidoreductase yvaa from bacillus subtilis in triclinic form 0.9416 9 349
3gfg-assembly3.cif.gz_F structure of putative oxidoreductase yvaa from bacillus subtilis in triclinic form 0.9412 8 349
3gfg-assembly5.cif.gz_I structure of putative oxidoreductase yvaa from bacillus subtilis in triclinic form 0.9411 8 349
ID Description Score Start End Superfamily
af_P77376_2_121_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9603 8 129 3.90.1150.10
6jnkA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9442 9 126 3.40.50.720
af_P77376_2_121_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9371 8 129 3.90.1150.10
3ezyC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9239 10 128 3.40.50.720
3e18B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9233 7 128 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4U2ZVA3-F1-model_v4 Oxidoreductase 0.9731 74 190 GO:0000166
AF-A0A263DKM7-F1-model_v4 Oxidoreductase 0.9596 1 351 GO:0000166
GO:0016491
AF-C1DKF2-F1-model_v4 Oxidoreductase, NAD-binding Rossmann fold, GFO_IDH_MocA family 0.9551 14 349 GO:0000166
AF-A0A364Y1S4-F1-model_v4 Oxidoreductase 0.9489 8 349 GO:0000166
AF-A0A1D8G0T4-F1-model_v4 Putative oxidoreductase YvaA (EC 1.-.-.-) 0.9488 2 349 GO:0000166
GO:0016491

Feature Viewer

pLDDT pTM Quality
94.18 0.92 High
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Predicted Structure (AlphaFold2)

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