F373450

General Info

Members Datasets Scaffolds Average Seq Length
265 147 263 388

Family's Representative Sequence

Representative Sequence 3300032139|Ga0316580_10028059|Ga0316580_100280592
Length 464
Sequence VAHCTICPVVIFFPACDREDNRFRRLNARMTIAIRISIRSIRPGIRVQVSVCVIHRRVVHGGTPLQYHPLFETLHSMHLHEYQSKRLFASYGIPVPAGVMLDSSAEVGSVAATLKGEAWVVKAQVHAGGRGKAGGVKRVTGRDELQATVDALLGSRLVTRQTGSTGLPVNSVLVEETVALEREFYLGMLVDRSRERLVVMASASGGMDIEEVAVRDPGAILTEVVSPAAGLQPYQCRNLAFGLGLKGKQVGAFTALLSAAFRLVQECDASLLEINPLVVTASGELLALDAKLDLDDNALFRHKDLADLQDASQEDVREHAARSHGLNFIVLDGNIACMVNGAGLAMATMDLIKLHGGEPANFLDVGGGATAERVAEAFKLILADSGVRAILVNIFGGIVRCDLIAEGILQAINEVAVTVPVVVRLEGTNAAEGLALISHSGLAVQTAGDLTEAALKAVAAAQPA

Samples

Sample ID Description Type Environment
1 2904456579 Variovorax sp. 2002 Isolate Unclassified
2 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
26 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
44 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
45 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
74 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
75 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
76 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
77 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
78 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
79 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
82 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
83 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
84 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
85 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
86 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
87 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
88 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
90 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
92 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
93 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
94 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
97 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
98 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
100 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
101 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
102 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
103 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
104 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
105 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
106 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
107 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
108 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
109 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
110 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
111 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
112 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
113 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
114 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
115 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
116 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
117 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
118 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
121 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
122 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
123 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
124 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
125 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
126 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
127 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
128 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
129 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
147 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.23
Metatranscriptomes 3.02
Isolates 0.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.51
Nodule 0
Rhizoplane 0.75
Rhizosphere 85.28
Stem 0
Stem Tuber 0
Unclassified 12.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10007666 3300005327 Bacteria 8700
2 Ga0070683_100019675 3300005329 Bacteria 5999
3 Ga0070683_100136783 3300005329 Bacteria 2320
4 Ga0070690_100096718 3300005330 Bacteria 1952
5 Ga0070660_100012409 3300005339 Bacteria 6084
6 Ga0070689_100076790 3300005340 Bacteria 2617
7 Ga0070687_100094016 3300005343 Bacteria 1664
8 Ga0070692_10084005 3300005345 Bacteria 1720
9 Ga0070673_100162581 3300005364 Bacteria 1900
10 Ga0070714_100009528 3300005435 Bacteria 7640
11 Ga0070714_100100295 3300005435 Bacteria 2550
12 Ga0070711_100017325 3300005439 Bacteria 4585
13 Ga0070681_10003660 3300005458 Bacteria 14415
14 Ga0070681_10034495 3300005458 Bacteria 5080
15 Ga0070684_100023742 3300005535 Bacteria 5134
16 Ga0070697_100084175 3300005536 Bacteria 2623
17 Ga0068853_100059561 3300005539 Bacteria 3299
18 Ga0070696_100011649 3300005546 Bacteria 5891
19 Ga0070693_100126052 3300005547 Bacteria 1594
20 Ga0068855_100012904 3300005563 Bacteria 10083
21 Ga0068855_100389314 3300005563 Bacteria 1529
22 Ga0068854_100183319 3300005578 Bacteria 1637
23 Ga0068856_100011345 3300005614 Bacteria 8644
24 Ga0068852_100006531 3300005616 Bacteria 8434
25 Ga0068859_100192844 3300005617 Bacteria 2122
26 Ga0068860_100017455 3300005843 Bacteria 6992
27 Ga0068860_100180711 3300005843 Bacteria 2039
28 Ga0075362_10014928 3300006177 Bacteria 3148
29 Ga0075366_10029508 3300006195 Bacteria 3222
30 Ga0097620_100192848 3300006931 Bacteria 2122
31 Ga0099794_10010366 3300007265 Bacteria 3955
32 Ga0105240_10000415 3300009093 Bacteria 78890
33 Ga0105240_10001386 3300009093 Bacteria 41666
34 Ga0105240_10007662 3300009093 Bacteria 15631
35 Ga0105240_10549133 3300009093 Bacteria 1278
36 Ga0111539_10024273 3300009094 Bacteria 7445
37 Ga0105243_10052013 3300009148 Bacteria 3243
38 Ga0105241_10009063 3300009174 Bacteria 7317
39 Ga0105242_10087974 3300009176 Bacteria 2609
40 Ga0105242_10352454 3300009176 Bacteria 1360
41 Ga0105237_10023278 3300009545 Bacteria 6349
42 Ga0105238_10005397 3300009551 Bacteria 12634
43 Ga0105238_10008542 3300009551 Bacteria 10247
44 Ga0105238_10016429 3300009551 Bacteria 7492
45 Ga0105238_10034213 3300009551 Bacteria 5171
46 Ga0105246_10017371 3300011119 Bacteria 4571
47 Ga0157370_10002027 3300013104 Bacteria 24893
48 Ga0157370_10013281 3300013104 Bacteria 8488
49 Ga0157370_10104675 3300013104 Bacteria 2649
50 Ga0157370_10152522 3300013104 Bacteria 2150
51 Ga0157369_10015376 3300013105 Bacteria 8629
52 Ga0157374_10000271 3300013296 Bacteria 48054
53 Ga0157372_10107641 3300013307 Bacteria 3190
54 Ga0157372_10489094 3300013307 Bacteria 1435
55 Ga0163163_10070147 3300014325 Bacteria 3490
56 Ga0163163_10108650 3300014325 Bacteria 2801
57 Ga0157379_10087264 3300014968 Bacteria 2797
58 Ga0213876_10063464 3300021384 Bacteria 1951
59 Ga0213875_10031453 3300021388 Bacteria 2511
60 Ga0207642_10073762 3300025899 Bacteria 1633
61 Ga0207654_10026433 3300025911 Bacteria 3143
62 Ga0207707_10016039 3300025912 Bacteria 6533
63 Ga0207695_10000866 3300025913 Bacteria 55400
64 Ga0207695_10007930 3300025913 Bacteria 13399
65 Ga0207695_10009083 3300025913 Bacteria 12344
66 Ga0207695_10309461 3300025913 Bacteria 1470
67 Ga0207695_10327634 3300025913 Bacteria 1420
68 Ga0207671_10019672 3300025914 Bacteria 5157
69 Ga0207663_10061950 3300025916 Bacteria 2376
70 Ga0207660_10061870 3300025917 Bacteria 2696
71 Ga0207657_10070911 3300025919 Bacteria 2952
72 Ga0207652_10050021 3300025921 Bacteria 3580
73 Ga0207694_10001184 3300025924 Bacteria 22583
74 Ga0207694_10005676 3300025924 Bacteria 9576
75 Ga0207694_10076037 3300025924 Bacteria 2629
76 Ga0207694_10086471 3300025924 Bacteria 2469
77 Ga0207687_10000451 3300025927 Bacteria 27967
78 Ga0207687_10145668 3300025927 Bacteria 1802
79 Ga0207664_10020038 3300025929 Bacteria 4950
80 Ga0207686_10236979 3300025934 Bacteria 1326
81 Ga0207709_10009556 3300025935 Bacteria 5337
82 Ga0207704_10026361 3300025938 Bacteria 3188
83 Ga0207704_10170631 3300025938 Bacteria 1560
84 Ga0207711_10107914 3300025941 Bacteria 2472
85 Ga0207711_10195191 3300025941 Bacteria 1846
86 Ga0207689_10008670 3300025942 Bacteria 8851
87 Ga0207661_10108900 3300025944 Bacteria 2340
88 Ga0207661_10166395 3300025944 Bacteria 1916
89 Ga0207667_10006269 3300025949 Bacteria 14435
90 Ga0207667_10008526 3300025949 Bacteria 12169
91 Ga0207640_10060270 3300025981 Bacteria 2507
92 Ga0207639_10075931 3300026041 Bacteria 2644
93 Ga0207702_10019598 3300026078 Bacteria 5598
94 Ga0207702_10099948 3300026078 Bacteria 2558
95 Ga0207648_10037703 3300026089 Bacteria 4258
96 Ga0207648_10084463 3300026089 Bacteria 2769
97 Ga0207674_10000441 3300026116 Bacteria 53811
98 Ga0207674_10067351 3300026116 Bacteria 3605
99 Ga0207698_10176386 3300026142 Bacteria 1888
100 Ga0207698_10194299 3300026142 Bacteria 1811
101 Ga0209588_1021911 3300027671 Bacteria 2009
102 Ga0268264_10094373 3300028381 Bacteria 2586
103 Ga0265338_10053051 3300028800 Bacteria 3631
104 Ga0265332_10013205 3300031238 Bacteria 3662
105 Ga0265320_10015209 3300031240 Bacteria 4355
106 Ga0265329_10008054 3300031242 Bacteria 4029
107 Ga0265340_10045307 3300031247 Bacteria 2149
108 Ga0265313_10004798 3300031595 Bacteria 10185
109 Ga0316575_10020804 3300031665 Bacteria 2519
110 Ga0316575_10024897 3300031665 Bacteria 2319
111 Ga0316579_10000561 3300031691 Bacteria 12400
112 Ga0316579_10002090 3300031691 Bacteria 7478
113 Ga0316579_10002231 3300031691 Bacteria 7301
114 Ga0316579_10048346 3300031691 Bacteria 1987
115 Ga0316579_10061519 3300031691 Bacteria 1767
116 Ga0316579_10064402 3300031691 Bacteria 1729
117 Ga0265314_10007729 3300031711 Bacteria 9292
118 Ga0316576_10000668 3300031727 Bacteria 16695
119 Ga0316576_10001523 3300031727 Bacteria 12541
120 Ga0316576_10005532 3300031727 Bacteria 7734
121 Ga0316576_10015361 3300031727 Bacteria 5138
122 Ga0316576_10029384 3300031727 Bacteria 3885
123 Ga0316576_10084230 3300031727 Bacteria 2363
124 Ga0316576_10113667 3300031727 Bacteria 2031
125 Ga0316578_10000298 3300031728 Bacteria 15146
126 Ga0316578_10000485 3300031728 Bacteria 13389
127 Ga0316578_10001245 3300031728 Bacteria 10146
128 Ga0316578_10006965 3300031728 Bacteria 5625
129 Ga0316578_10011873 3300031728 Bacteria 4574
130 Ga0316578_10022150 3300031728 Bacteria 3538
131 Ga0316578_10095119 3300031728 Bacteria 1782
132 Ga0316577_10003314 3300031733 Bacteria 8115
133 Ga0316577_10131396 3300031733 Bacteria 1409
134 Ga0316583_10000505 3300032133 Bacteria 11690
135 Ga0316583_10011760 3300032133 Bacteria 3157
136 Ga0316585_10014458 3300032137 Bacteria 2359
137 Ga0316585_10027232 3300032137 Bacteria 1782
138 Ga0316585_10030438 3300032137 Bacteria 1693
139 Ga0316585_10059694 3300032137 Bacteria 1231
140 Ga0316580_10000153 3300032139 Bacteria 13473
141 Ga0316580_10004207 3300032139 Bacteria 4156
142 Ga0316580_10008502 3300032139 Bacteria 3074
143 Ga0316580_10019808 3300032139 Bacteria 2069
144 Ga0316580_10028059 3300032139 Bacteria 1740
145 Ga0316593_10004099 3300032168 Bacteria 3699
146 Ga0316592_1000957 3300033524 Bacteria 4436
147 Ga0316588_1000091 3300033528 Bacteria 8336
148 Ga0316588_1000365 3300033528 Bacteria 5871
149 Ga0316596_1000506 3300033541 Bacteria 6646
150 Ga0316596_1002845 3300033541 Bacteria 3741
151 Ga0316596_1007411 3300033541 Bacteria 2592
152 Ga0316596_1020619 3300033541 Bacteria 1677
153 Ga0373955_0058467 3300035172 Bacteria 2122
154 Ga0316574_0004153 3300035398 Bacteria 7545
155 Ga0316574_0005203 3300035398 Bacteria 6917
156 Ga0316574_0026483 3300035398 Bacteria 3488
157 Ga0316574_0029295 3300035398 Bacteria 3325
158 Ga0316574_0029895 3300035398 Bacteria 3295
159 Ga0316574_0054821 3300035398 Bacteria 2491
160 Ga0316574_0060801 3300035398 Bacteria 2372
161 Ga0316574_0150978 3300035398 Bacteria 1497
162 Ga0316574_0164238 3300035398 Bacteria 1430
163 Ga0373927_0000254 3300035695 Bacteria 41888
164 Ga0373927_0001540 3300035695 Bacteria 17336
165 Ga0373933_0061151 3300035724 Bacteria 2272
166 Ga0373937_0008410 3300036401 Bacteria 8970
167 Ga0373937_0073171 3300036401 Bacteria 3161
168 Ga0373937_0430103 3300036401 Bacteria 1253
169 Ga0316582_0001897 3300036647 Bacteria 9508
170 Ga0316582_0002828 3300036647 Bacteria 8299
171 Ga0316582_0003413 3300036647 Bacteria 7785
172 Ga0316582_0006912 3300036647 Bacteria 6002
173 Ga0316582_0012384 3300036647 Bacteria 4757
174 Ga0316582_0014120 3300036647 Bacteria 4522
175 Ga0316582_0024156 3300036647 Bacteria 3634
176 Ga0316582_0025248 3300036647 Bacteria 3566
177 Ga0316582_0026217 3300036647 Bacteria 3507
178 Ga0316582_0035728 3300036647 Bacteria 3071
179 Ga0316582_0041404 3300036647 Bacteria 2879
180 Ga0316582_0085192 3300036647 Bacteria 2070
181 Ga0316582_0095453 3300036647 Bacteria 1962
182 Ga0316584_0001074 3300036712 Bacteria 15985
183 Ga0316584_0002851 3300036712 Bacteria 11092
184 Ga0316584_0006706 3300036712 Bacteria 7808
185 Ga0316584_0010384 3300036712 Bacteria 6503
186 Ga0316584_0082222 3300036712 Bacteria 2412
187 Ga0316584_0124479 3300036712 Bacteria 1926
188 Ga0316584_0139904 3300036712 Bacteria 1806
189 Ga0316584_0159947 3300036712 Bacteria 1673
190 Ga0373925_0005478 3300037068 Bacteria 9449
191 Ga0395900_0034535 3300037418 Bacteria 5209
192 Ga0395898_0233730 3300037466 Bacteria 1753
193 Ga0395905_0278830 3300037471 Bacteria 1558
194 Ga0316581_0000648 3300037588 Bacteria 6984
195 Ga0316581_0012938 3300037588 Bacteria 2358
196 Ga0436364_0430552 3300037853 Bacteria 1505
197 Ga0436364_0838784 3300037853 Bacteria 1741
198 Ga0436364_0842529 3300037853 Bacteria 3913
199 Ga0400484_04386 3300038725 Bacteria 4722
200 Ga0400484_19378 3300038725 Bacteria 8145
201 Ga0400484_26663 3300038725 Bacteria 9980
202 Ga0400490_29637 3300038726 Bacteria 4184
203 Ga0400490_45281 3300038726 Bacteria 70798
204 Ga0400490_57938 3300038726 Bacteria 15018
205 Ga0400485_17237 3300038735 Bacteria 11732
206 Ga0400488_22908 3300038741 Bacteria 14284
207 Ga0400488_29989 3300038741 Bacteria 20412
208 Ga0400488_41056 3300038741 Bacteria 1648
209 Ga0400488_57738 3300038741 Bacteria 7217
210 Ga0400486_13504 3300038742 Bacteria 8880
211 Ga0400486_17527 3300038742 Bacteria 18835
212 Ga0400483_036464 3300039062 Bacteria 81870
213 Ga0400483_044109 3300039062 Bacteria 5874
214 Ga0400483_082682 3300039062 Bacteria 3809
215 Ga0400483_084438 3300039062 Bacteria 1300
216 Ga0400483_180156 3300039062 Bacteria 9300
217 Ga0400483_223515 3300039062 Bacteria 4526
218 Ga0400483_251281 3300039062 Bacteria 3786
219 Ga0400487_04654 3300039110 Bacteria 1657
220 Ga0400487_06782 3300039110 Bacteria 7801
221 Ga0400487_07588 3300039110 Bacteria 2978
222 Ga0400487_24512 3300039110 Bacteria 7439
223 Ga0400487_64418 3300039110 Bacteria 1823
224 Ga0436365_0915176 3300039437 Bacteria 1685
225 Ga0439439_0000253 3300041406 Bacteria 8385
226 Ga0439433_0004634 3300041999 Bacteria 2954
227 Ga0450906_003112 3300042145 Bacteria 3586
228 Ga0451577_0198552 3300042876 Bacteria 1811
229 Ga0466968_0000332 3300044735 Bacteria 15208
230 Ga0495627_001688 3300046453 Bacteria 12141
231 Ga0495651_0005597 3300046462 Bacteria 9575
232 Ga0495580_0121626 3300046472 Bacteria 1812
233 Ga0495582_0004335 3300046473 Bacteria 7981
234 Ga0495639_0093810 3300046475 Bacteria 1411
235 Ga0495608_0005234 3300046511 Bacteria 9269
236 Ga0495628_0001674 3300046516 Bacteria 20237
237 Ga0495652_0131467 3300046529 Bacteria 1981
238 Ga0495665_0107124 3300046531 Bacteria 1466
239 Ga0495587_0123370 3300046536 Bacteria 1483
240 Ga0495623_0020136 3300046679 Bacteria 4312
241 Ga0495646_0044071 3300046680 Bacteria 2729
242 Ga0495602_0023857 3300048088 Bacteria 5948
243 Ga0496112_0063391 3300048915 Bacteria 3646
244 Ga0496114_0026482 3300048917 Bacteria 4747
245 Ga0496126_0208741 3300048929 Bacteria 1645
246 Ga0501032_0000993 3300049569 Bacteria 22838
247 Ga0501033_0245962 3300049570 Bacteria 1268
248 Ga0501034_0020976 3300049571 Bacteria 6669
249 Ga0501037_0020557 3300049573 Bacteria 4874
250 Ga0501038_0002873 3300049574 Bacteria 16055
251 Ga0501046_0007857 3300049580 Bacteria 9358
252 Ga0501047_0005966 3300049581 Bacteria 11450
253 Ga0501047_0035699 3300049581 Bacteria 4803
254 Ga0501047_0180258 3300049581 Bacteria 1979
255 Ga0501070_0016774 3300049586 Bacteria 6148
256 Ga0501070_0069709 3300049586 Bacteria 2911
257 Ga0501073_0103366 3300049589 Bacteria 1978
258 Ga0501074_0002536 3300049590 Bacteria 12744
259 Ga0501080_0002914 3300049742 Bacteria 15030
260 Ga0501035_0053084 3300049822 Bacteria 3626
261 Ga0501044_0008032 3300049823 Bacteria 11593
262 nmdc:mga03683_3081_c1 3300050489 Bacteria 5297
263 Ga0500608_001834 3300053122 Bacteria 7561

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049570 Ga0501033_0245962 Ga0501033_0245962_315_1250 311
2 3300035695 Ga0373927_0000254 Ga0373927_0000254_32045_33202 354
3 3300005536 Ga0070697_100084175 Ga0070697_1000841752 356
4 3300009551 Ga0105238_10016429 Ga0105238_100164295 360
5 3300035695 Ga0373927_0001540 Ga0373927_0001540_9750_10907 360
6 3300042876 Ga0451577_0198552 Ga0451577_0198552_689_1777 362
7 3300009093 Ga0105240_10000415 Ga0105240_1000041571 370
8 3300025913 Ga0207695_10007930 Ga0207695_1000793010 370
9 3300037068 Ga0373925_0005478 Ga0373925_0005478_7609_8781 370
10 3300005340 Ga0070689_100076790 Ga0070689_1000767902 372
11 3300009148 Ga0105243_10052013 Ga0105243_100520134 372
12 3300025935 Ga0207709_10009556 Ga0207709_100095564 372
13 3300025938 Ga0207704_10170631 Ga0207704_101706312 372
14 3300026089 Ga0207648_10084463 Ga0207648_100844633 372
15 3300032133 Ga0316583_10000505 Ga0316583_100005053 372
16 3300035398 Ga0316574_0060801 Ga0316574_0060801_1015_2181 372
17 3300036647 Ga0316582_0025248 Ga0316582_0025248_1971_3137 372
18 3300048929 Ga0496126_0208741 Ga0496126_0208741_346_1503 372
19 3300005439 Ga0070711_100017325 Ga0070711_1000173252 374
20 3300046536 Ga0495587_0123370 Ga0495587_0123370_111_1268 374
21 3300039110 Ga0400487_07588 Ga0400487_07588_1800_2963 376
22 3300026089 Ga0207648_10037703 Ga0207648_100377034 377
23 3300038725 Ga0400484_04386 Ga0400484_04386_1170_2330 380
24 3300005329 Ga0070683_100019675 Ga0070683_1000196756 385
25 3300005329 Ga0070683_100136783 Ga0070683_1001367832 385
26 3300005330 Ga0070690_100096718 Ga0070690_1000967182 385
27 3300005339 Ga0070660_100012409 Ga0070660_1000124097 385
28 3300005345 Ga0070692_10084005 Ga0070692_100840051 385
29 3300005364 Ga0070673_100162581 Ga0070673_1001625812 385
30 3300005435 Ga0070714_100100295 Ga0070714_1001002952 385
31 3300005458 Ga0070681_10003660 Ga0070681_100036608 385
32 3300005458 Ga0070681_10034495 Ga0070681_100344952 385
33 3300005535 Ga0070684_100023742 Ga0070684_1000237424 385
34 3300005539 Ga0068853_100059561 Ga0068853_1000595613 385
35 3300005546 Ga0070696_100011649 Ga0070696_1000116494 385
36 3300005547 Ga0070693_100126052 Ga0070693_1001260522 385
37 3300005563 Ga0068855_100012904 Ga0068855_1000129045 385
38 3300005563 Ga0068855_100389314 Ga0068855_1003893141 385
39 3300005578 Ga0068854_100183319 Ga0068854_1001833192 385
40 3300005614 Ga0068856_100011345 Ga0068856_1000113454 385
41 3300005616 Ga0068852_100006531 Ga0068852_1000065317 385
42 3300005617 Ga0068859_100192844 Ga0068859_1001928442 385
43 3300005843 Ga0068860_100017455 Ga0068860_1000174552 385
44 3300005843 Ga0068860_100180711 Ga0068860_1001807112 385
45 3300006931 Ga0097620_100192848 Ga0097620_1001928482 385
46 3300009093 Ga0105240_10001386 Ga0105240_1000138611 385
47 3300009093 Ga0105240_10007662 Ga0105240_100076622 385
48 3300009093 Ga0105240_10549133 Ga0105240_105491331 385
49 3300009174 Ga0105241_10009063 Ga0105241_100090634 385
50 3300009176 Ga0105242_10087974 Ga0105242_100879742 385
51 3300009176 Ga0105242_10352454 Ga0105242_103524542 385
52 3300009545 Ga0105237_10023278 Ga0105237_100232787 385
53 3300009551 Ga0105238_10005397 Ga0105238_100053975 385
54 3300009551 Ga0105238_10008542 Ga0105238_1000854212 385
55 3300009551 Ga0105238_10034213 Ga0105238_100342131 385
56 3300011119 Ga0105246_10017371 Ga0105246_100173712 385
57 3300013104 Ga0157370_10002027 Ga0157370_1000202710 385
58 3300013104 Ga0157370_10104675 Ga0157370_101046752 385
59 3300013104 Ga0157370_10152522 Ga0157370_101525222 385
60 3300013105 Ga0157369_10015376 Ga0157369_1001537610 385
61 3300013307 Ga0157372_10107641 Ga0157372_101076413 385
62 3300013307 Ga0157372_10489094 Ga0157372_104890941 385
63 3300014325 Ga0163163_10070147 Ga0163163_100701474 385
64 3300021384 Ga0213876_10063464 Ga0213876_100634642 385
65 3300021388 Ga0213875_10031453 Ga0213875_100314531 385
66 3300025899 Ga0207642_10073762 Ga0207642_100737622 385
67 3300025911 Ga0207654_10026433 Ga0207654_100264332 385
68 3300025912 Ga0207707_10016039 Ga0207707_100160392 385
69 3300025913 Ga0207695_10000866 Ga0207695_1000086636 385
70 3300025913 Ga0207695_10009083 Ga0207695_1000908310 385
71 3300025913 Ga0207695_10309461 Ga0207695_103094611 385
72 3300025913 Ga0207695_10327634 Ga0207695_103276342 385
73 3300025914 Ga0207671_10019672 Ga0207671_100196724 385
74 3300025916 Ga0207663_10061950 Ga0207663_100619502 385
75 3300025917 Ga0207660_10061870 Ga0207660_100618702 385
76 3300025919 Ga0207657_10070911 Ga0207657_100709114 385
77 3300025921 Ga0207652_10050021 Ga0207652_100500212 385
78 3300025924 Ga0207694_10001184 Ga0207694_1000118420 385
79 3300025924 Ga0207694_10005676 Ga0207694_100056765 385
80 3300025924 Ga0207694_10076037 Ga0207694_100760371 385
81 3300025924 Ga0207694_10086471 Ga0207694_100864712 385
82 3300025927 Ga0207687_10000451 Ga0207687_1000045119 385
83 3300025934 Ga0207686_10236979 Ga0207686_102369791 385
84 3300025938 Ga0207704_10026361 Ga0207704_100263613 385
85 3300025941 Ga0207711_10107914 Ga0207711_101079142 385
86 3300025941 Ga0207711_10195191 Ga0207711_101951912 385
87 3300025944 Ga0207661_10108900 Ga0207661_101089003 385
88 3300025944 Ga0207661_10166395 Ga0207661_101663952 385
89 3300025949 Ga0207667_10006269 Ga0207667_100062694 385
90 3300025949 Ga0207667_10008526 Ga0207667_1000852613 385
91 3300025981 Ga0207640_10060270 Ga0207640_100602701 385
92 3300026041 Ga0207639_10075931 Ga0207639_100759313 385
93 3300026078 Ga0207702_10019598 Ga0207702_100195983 385
94 3300026078 Ga0207702_10099948 Ga0207702_100999482 385
95 3300026116 Ga0207674_10000441 Ga0207674_1000044141 385
96 3300026116 Ga0207674_10067351 Ga0207674_100673514 385
97 3300026142 Ga0207698_10176386 Ga0207698_101763862 385
98 3300026142 Ga0207698_10194299 Ga0207698_101942992 385
99 3300028800 Ga0265338_10053051 Ga0265338_100530511 385
100 3300031238 Ga0265332_10013205 Ga0265332_100132052 385
101 3300031240 Ga0265320_10015209 Ga0265320_100152092 385
102 3300031242 Ga0265329_10008054 Ga0265329_100080542 385
103 3300031247 Ga0265340_10045307 Ga0265340_100453072 385
104 3300031595 Ga0265313_10004798 Ga0265313_100047988 385
105 3300031727 Ga0316576_10029384 Ga0316576_100293842 385
106 3300031728 Ga0316578_10000485 Ga0316578_100004852 385
107 3300032139 Ga0316580_10019808 Ga0316580_100198082 385
108 3300035172 Ga0373955_0058467 Ga0373955_0058467_859_2016 385
109 3300035724 Ga0373933_0061151 Ga0373933_0061151_443_1600 385
110 3300036401 Ga0373937_0008410 Ga0373937_0008410_3835_4992 385
111 3300036401 Ga0373937_0073171 Ga0373937_0073171_650_1807 385
112 3300036401 Ga0373937_0430103 Ga0373937_0430103_78_1235 385
113 3300036647 Ga0316582_0026217 Ga0316582_0026217_1711_2886 385
114 3300036712 Ga0316584_0159947 Ga0316584_0159947_263_1438 385
115 3300037418 Ga0395900_0034535 Ga0395900_0034535_1784_2941 385
116 3300037466 Ga0395898_0233730 Ga0395898_0233730_414_1571 385
117 3300037471 Ga0395905_0278830 Ga0395905_0278830_194_1351 385
118 3300037853 Ga0436364_0430552 Ga0436364_0430552_303_1460 385
119 3300037853 Ga0436364_0838784 Ga0436364_0838784_36_1193 385
120 3300037853 Ga0436364_0842529 Ga0436364_0842529_921_2078 385
121 3300039437 Ga0436365_0915176 Ga0436365_0915176_267_1424 385
122 3300046472 Ga0495580_0121626 Ga0495580_0121626_440_1597 385
123 3300046473 Ga0495582_0004335 Ga0495582_0004335_2841_3998 385
124 3300046475 Ga0495639_0093810 Ga0495639_0093810_147_1304 385
125 3300046529 Ga0495652_0131467 Ga0495652_0131467_80_1237 385
126 3300048915 Ga0496112_0063391 Ga0496112_0063391_2098_3255 385
127 3300049571 Ga0501034_0020976 Ga0501034_0020976_5299_6456 385
128 3300049581 Ga0501047_0005966 Ga0501047_0005966_4931_6088 385
129 3300049586 Ga0501070_0016774 Ga0501070_0016774_2368_3525 385
130 3300049589 Ga0501073_0103366 Ga0501073_0103366_148_1305 385
131 3300049822 Ga0501035_0053084 Ga0501035_0053084_331_1488 385
132 3300049823 Ga0501044_0008032 Ga0501044_0008032_8094_9251 385
133 iso_pu_bacteria 2904456579 2904460727 385
134 3300014968 Ga0157379_10087264 Ga0157379_100872643 386
135 3300028381 Ga0268264_10094373 Ga0268264_100943731 386
136 3300031665 Ga0316575_10020804 Ga0316575_100208042 386
137 3300032168 Ga0316593_10004099 Ga0316593_100040992 386
138 3300038725 Ga0400484_19378 Ga0400484_19378_5897_7057 386
139 3300038725 Ga0400484_26663 Ga0400484_26663_2910_4070 386
140 3300038726 Ga0400490_29637 Ga0400490_29637_2897_4057 386
141 3300038726 Ga0400490_45281 Ga0400490_45281_60876_62036 386
142 3300038726 Ga0400490_57938 Ga0400490_57938_3121_4281 386
143 3300038735 Ga0400485_17237 Ga0400485_17237_9551_10711 386
144 3300038741 Ga0400488_29989 Ga0400488_29989_15589_16749 386
145 3300038741 Ga0400488_41056 Ga0400488_41056_197_1357 386
146 3300038741 Ga0400488_57738 Ga0400488_57738_5161_6321 386
147 3300038742 Ga0400486_13504 Ga0400486_13504_1010_2170 386
148 3300038742 Ga0400486_17527 Ga0400486_17527_6537_7697 386
149 3300039062 Ga0400483_036464 Ga0400483_036464_71952_73112 386
150 3300039062 Ga0400483_044109 Ga0400483_044109_2155_3315 386
151 3300039062 Ga0400483_082682 Ga0400483_082682_893_2053 386
152 3300039062 Ga0400483_084438 Ga0400483_084438_37_1197 386
153 3300039062 Ga0400483_180156 Ga0400483_180156_1594_2754 386
154 3300039062 Ga0400483_223515 Ga0400483_223515_1222_2418 386
155 3300039062 Ga0400483_251281 Ga0400483_251281_2531_3691 386
156 3300039110 Ga0400487_04654 Ga0400487_04654_88_1248 386
157 3300039110 Ga0400487_06782 Ga0400487_06782_953_2113 386
158 3300039110 Ga0400487_24512 Ga0400487_24512_3916_5076 386
159 3300039110 Ga0400487_64418 Ga0400487_64418_136_1296 386
160 3300046531 Ga0495665_0107124 Ga0495665_0107124_256_1416 386
161 iso_pu_bacteria 2945945610 2945945813 386
162 3300035398 Ga0316574_0164238 Ga0316574_0164238_27_1190 387
163 3300038741 Ga0400488_22908 Ga0400488_22908_6454_7617 387
164 3300006177 Ga0075362_10014928 Ga0075362_100149282 388
165 3300006195 Ga0075366_10029508 Ga0075366_100295082 388
166 3300007265 Ga0099794_10010366 Ga0099794_100103662 388
167 3300009094 Ga0111539_10024273 Ga0111539_100242734 388
168 3300014325 Ga0163163_10108650 Ga0163163_101086502 388
169 3300027671 Ga0209588_1021911 Ga0209588_10219112 388
170 3300031691 Ga0316579_10061519 Ga0316579_100615192 388
171 3300031727 Ga0316576_10113667 Ga0316576_101136672 388
172 3300032139 Ga0316580_10028059 Ga0316580_100280592 388
173 3300033541 Ga0316596_1020619 Ga0316596_10206191 388
174 3300036647 Ga0316582_0024156 Ga0316582_0024156_805_1974 388
175 3300036647 Ga0316582_0095453 Ga0316582_0095453_730_1896 388
176 3300041406 Ga0439439_0000253 Ga0439439_0000253_3736_4902 388
177 3300041999 Ga0439433_0004634 Ga0439433_0004634_255_1421 388
178 3300042145 Ga0450906_003112 Ga0450906_003112_451_1617 388
179 3300044735 Ga0466968_0000332 Ga0466968_0000332_3481_4647 388
180 3300046462 Ga0495651_0005597 Ga0495651_0005597_2255_3421 388
181 3300046511 Ga0495608_0005234 Ga0495608_0005234_2905_4071 388
182 3300046516 Ga0495628_0001674 Ga0495628_0001674_12946_14112 388
183 3300046679 Ga0495623_0020136 Ga0495623_0020136_171_1337 388
184 3300046680 Ga0495646_0044071 Ga0495646_0044071_961_2127 388
185 3300048088 Ga0495602_0023857 Ga0495602_0023857_1214_2380 388
186 3300049569 Ga0501032_0000993 Ga0501032_0000993_17474_18640 388
187 3300050489 nmdc:mga03683_3081_c1 nmdc:mga03683_3081_c1_256_1422 388
188 3300005343 Ga0070687_100094016 Ga0070687_1000940161 389
189 3300031691 Ga0316579_10000561 Ga0316579_1000056110 389
190 3300031691 Ga0316579_10002231 Ga0316579_100022313 389
191 3300031727 Ga0316576_10000668 Ga0316576_100006689 389
192 3300031728 Ga0316578_10001245 Ga0316578_100012454 389
193 3300031728 Ga0316578_10006965 Ga0316578_100069652 389
194 3300031728 Ga0316578_10095119 Ga0316578_100951192 389
195 3300032133 Ga0316583_10011760 Ga0316583_100117602 389
196 3300032137 Ga0316585_10014458 Ga0316585_100144582 389
197 3300033541 Ga0316596_1002845 Ga0316596_10028453 389
198 3300035398 Ga0316574_0026483 Ga0316574_0026483_1125_2294 389
199 3300035398 Ga0316574_0029895 Ga0316574_0029895_1230_2402 389
200 3300036647 Ga0316582_0003413 Ga0316582_0003413_635_1804 389
201 3300036647 Ga0316582_0006912 Ga0316582_0006912_1079_2251 389
202 3300036647 Ga0316582_0035728 Ga0316582_0035728_839_2008 389
203 3300036647 Ga0316582_0085192 Ga0316582_0085192_531_1700 389
204 3300036712 Ga0316584_0002851 Ga0316584_0002851_6529_7701 389
205 3300036712 Ga0316584_0082222 Ga0316584_0082222_526_1695 389
206 3300037588 Ga0316581_0000648 Ga0316581_0000648_1148_2320 389
207 3300046453 Ga0495627_001688 Ga0495627_001688_5670_6839 389
208 3300049573 Ga0501037_0020557 Ga0501037_0020557_1642_2811 389
209 3300049574 Ga0501038_0002873 Ga0501038_0002873_8859_10028 389
210 3300049580 Ga0501046_0007857 Ga0501046_0007857_7956_9125 389
211 3300049581 Ga0501047_0035699 Ga0501047_0035699_821_1990 389
212 3300049581 Ga0501047_0180258 Ga0501047_0180258_170_1339 389
213 3300049586 Ga0501070_0069709 Ga0501070_0069709_290_1459 389
214 3300049590 Ga0501074_0002536 Ga0501074_0002536_8908_10077 389
215 3300049742 Ga0501080_0002914 Ga0501080_0002914_7215_8384 389
216 3300053122 Ga0500608_001834 Ga0500608_001834_1638_2807 389
217 3300025927 Ga0207687_10145668 Ga0207687_101456682 390
218 3300025942 Ga0207689_10008670 Ga0207689_100086706 390
219 3300031665 Ga0316575_10024897 Ga0316575_100248971 390
220 3300031691 Ga0316579_10002090 Ga0316579_100020907 390
221 3300031691 Ga0316579_10048346 Ga0316579_100483462 390
222 3300031727 Ga0316576_10015361 Ga0316576_100153613 390
223 3300031728 Ga0316578_10022150 Ga0316578_100221503 390
224 3300031733 Ga0316577_10131396 Ga0316577_101313961 390
225 3300032137 Ga0316585_10027232 Ga0316585_100272321 390
226 3300032137 Ga0316585_10030438 Ga0316585_100304382 390
227 3300032139 Ga0316580_10004207 Ga0316580_100042073 390
228 3300033541 Ga0316596_1007411 Ga0316596_10074111 390
229 3300035398 Ga0316574_0029295 Ga0316574_0029295_560_1732 390
230 3300035398 Ga0316574_0150978 Ga0316574_0150978_170_1342 390
231 3300036647 Ga0316582_0002828 Ga0316582_0002828_2711_3883 390
232 3300036647 Ga0316582_0012384 Ga0316582_0012384_735_1907 390
233 3300036647 Ga0316582_0041404 Ga0316582_0041404_519_1691 390
234 3300036712 Ga0316584_0124479 Ga0316584_0124479_468_1640 390
235 3300036712 Ga0316584_0139904 Ga0316584_0139904_578_1750 390
236 3300037588 Ga0316581_0012938 Ga0316581_0012938_71_1243 390
237 3300048917 Ga0496114_0026482 Ga0496114_0026482_485_1660 390
238 3300013296 Ga0157374_10000271 Ga0157374_100002718 391
239 3300031711 Ga0265314_10007729 Ga0265314_100077294 391
240 3300031727 Ga0316576_10084230 Ga0316576_100842302 391
241 3300035398 Ga0316574_0054821 Ga0316574_0054821_1293_2468 391
242 3300005327 Ga0070658_10007666 Ga0070658_100076662 392
243 3300005435 Ga0070714_100009528 Ga0070714_1000095282 392
244 3300013104 Ga0157370_10013281 Ga0157370_100132817 392
245 3300025929 Ga0207664_10020038 Ga0207664_100200384 392
246 3300031691 Ga0316579_10064402 Ga0316579_100644021 392
247 3300031727 Ga0316576_10001523 Ga0316576_100015235 392
248 3300031727 Ga0316576_10005532 Ga0316576_100055322 392
249 3300031728 Ga0316578_10000298 Ga0316578_1000029812 392
250 3300031728 Ga0316578_10011873 Ga0316578_100118732 392
251 3300031733 Ga0316577_10003314 Ga0316577_100033146 392
252 3300032137 Ga0316585_10059694 Ga0316585_100596941 392
253 3300032139 Ga0316580_10000153 Ga0316580_100001534 392
254 3300032139 Ga0316580_10008502 Ga0316580_100085022 392
255 3300033524 Ga0316592_1000957 Ga0316592_10009571 392
256 3300033528 Ga0316588_1000091 Ga0316588_10000912 392
257 3300033528 Ga0316588_1000365 Ga0316588_10003652 392
258 3300033541 Ga0316596_1000506 Ga0316596_10005061 392
259 3300035398 Ga0316574_0004153 Ga0316574_0004153_5746_6927 392
260 3300035398 Ga0316574_0005203 Ga0316574_0005203_4664_5845 392
261 3300036647 Ga0316582_0001897 Ga0316582_0001897_2076_3257 392
262 3300036647 Ga0316582_0014120 Ga0316582_0014120_1312_2493 392
263 3300036712 Ga0316584_0001074 Ga0316584_0001074_10272_11453 392
264 3300036712 Ga0316584_0006706 Ga0316584_0006706_6150_7331 392
265 3300036712 Ga0316584_0010384 Ga0316584_0010384_1554_2792 392

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08442

ATP-grasp_2

ATP-grasp domain

78

279

0.99

PF00549

Ligase_CoA

CoA-ligase

338

458

0.97

PF13549

ATP-grasp_5

ATP-grasp domain

73

294

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
6no1-assembly1.cif.gz_A adp bound to k46be mutant atp-grasp fold of blastocystis hominis succinyl-coa synthetase 0.9407 1 218
6no6-assembly1.cif.gz_B k46be&k114bd mutant atp-grasp fold of blastocystis hominis succinyl-coa synthetase 0.936 1 219
6no3-assembly1.cif.gz_B adp bound to v113bl mutant atp-grasp fold of blastocystis hominis succinyl-coa synthetase 0.9345 1 219
6no0-assembly1.cif.gz_A adp bound to atp-grasp fold of blastocystis hominis succinyl-coa synthetase 0.9328 1 218
6no5-assembly2.cif.gz_D adp bound to k46be&k114bd mutant atp-grasp fold of blastocystis hominis succinyl-coa synthetase 0.9286 1 219
ID Description Score Start End Superfamily
af_Q2FZ37_21_104_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9869 21 104 3.30.470.20
af_Q2FZ37_21_104_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9754 21 104 3.30.470.20
3ufxB02 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.9625 21 104 3.30.1490.20
af_Q55AI5_55_145_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9614 21 100 3.30.470.20
af_Q4DW49_41_138_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9579 21 102 3.30.470.20
ID Description Score Start End GO Terms
AF-A0A6N8V4R6-F1-model_v4 Succinate--CoA ligase subunit beta (EC 6.2.1.5) 0.9985 298 385 GO:0004775
GO:0005829
GO:0006099
GO:0006104
GO:0042709
AF-A0A351FC68-F1-model_v4 Succinate--CoA ligase subunit beta (EC 6.2.1.5) 0.996 311 387 GO:0004775
GO:0006099
GO:0006104
GO:0042709
AF-X0X132-F1-model_v4 ATP-citrate synthase/succinyl-CoA ligase C-terminal domain-containing protein 0.9937 264 387 GO:0004775
GO:0006099
GO:0006104
GO:0042709
AF-W7WQS1-F1-model_v4 deleted 0.9937 306 385
AF-A0A4Q3YXR6-F1-model_v4 Succinate--CoA ligase subunit beta (EC 6.2.1.5) 0.9928 249 364 GO:0000166
GO:0004775
GO:0005829
GO:0006099
GO:0006104
GO:0042709

Feature Viewer

pLDDT pTM Quality
92.37 0.8 High
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Predicted Structure (AlphaFold2)

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