F373221

General Info

Members Datasets Scaffolds Average Seq Length
265 166 530 198

Family's Representative Sequence

Representative Sequence 3300006042|Ga0075368_10041729|Ga0075368_100417292
Length 213
Sequence MADTADTRVPGSPGGRARASLIAFEGLDQSGKETQARLLRARLEQAGHRVESLTFPDDTTTIGQEIRAGLSTRSYPADVMQLLYIANRHERKEAIEGWLASGAVVICDRYLASSVAYGEAHGLSADWLIDTQRFLPQPSLTILLDIAPETARARKAAGRDKYESDLDLLARVRQSYRGLAARLPNWVMFDGERSRDDVQAAISETVASRLGLP

Samples

Sample ID Description Type Environment
1 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
50 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
51 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
52 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
53 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
54 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
55 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
57 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
58 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
59 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
60 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
113 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
114 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
115 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
116 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
117 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
118 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
119 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
120 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
121 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
122 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
123 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
124 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
125 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
126 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
127 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
128 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
129 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
130 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
131 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
132 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
133 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
134 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
135 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
136 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
137 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
140 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
141 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
148 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
149 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
150 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
151 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
152 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
153 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
154 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
155 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
156 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
157 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
158 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
159 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
160 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
161 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
162 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
163 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
164 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
165 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
166 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.68
Nodule 0
Rhizoplane 2.64
Rhizosphere 88.68
Stem 0
Stem Tuber 0
Unclassified 16.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075368_10041729 3300006042 Bacteria 1803
2 Ga0065704_10251028 3300005289 Bacteria 989
3 Ga0065712_10030767 3300005290 Bacteria 1399
4 Ga0065712_10076675 3300005290 Bacteria 3619
5 Ga0065712_10116322 3300005290 Bacteria 1737
6 Ga0065712_10121162 3300005290 Bacteria 1668
7 Ga0065715_10001743 3300005293 Bacteria 6854
8 Ga0065715_10043180 3300005293 Bacteria 1149
9 Ga0065715_10291133 3300005293 Bacteria 1063
10 Ga0065715_10329015 3300005293 Unclassified 978
11 Ga0065707_10000834 3300005295 Bacteria 15115
12 Ga0065707_10004769 3300005295 Bacteria 3974
13 Ga0065707_10132132 3300005295 Bacteria 1902
14 Ga0070670_100008907 3300005331 Bacteria 8568
15 Ga0070670_100021234 3300005331 Bacteria 5586
16 Ga0070670_100304764 3300005331 Bacteria 1394
17 Ga0070670_100556898 3300005331 Unclassified 1023
18 Ga0070670_100670105 3300005331 Bacteria 931
19 Ga0070677_10024905 3300005333 Bacteria 2230
20 Ga0068869_100360807 3300005334 Bacteria 1186
21 Ga0070666_10094800 3300005335 Bacteria 2053
22 Ga0070666_10938051 3300005335 Bacteria 641
23 Ga0068868_100010525 3300005338 Bacteria 6703
24 Ga0068868_100017305 3300005338 Bacteria 5367
25 Ga0070689_100018035 3300005340 Bacteria 5192
26 Ga0070687_100722614 3300005343 Bacteria 698
27 Ga0070692_10311316 3300005345 Bacteria 965
28 Ga0070669_100052845 3300005353 Bacteria 2974
29 Ga0070669_100804967 3300005353 Bacteria 799
30 Ga0070675_100206897 3300005354 Bacteria 1705
31 Ga0070675_100283653 3300005354 Bacteria 1456
32 Ga0070675_100906431 3300005354 Bacteria 808
33 Ga0070671_100037771 3300005355 Unclassified 4006
34 Ga0070671_100225916 3300005355 Bacteria 1588
35 Ga0070671_100666327 3300005355 Bacteria 901
36 Ga0070674_100038850 3300005356 Bacteria 3210
37 Ga0070674_100087634 3300005356 Unclassified 2239
38 Ga0070674_100319293 3300005356 Unclassified 1244
39 Ga0070674_100762283 3300005356 Bacteria 832
40 Ga0070673_100080865 3300005364 Bacteria 2634
41 Ga0070673_100146968 3300005364 Bacteria 1993
42 Ga0070673_101156567 3300005364 Bacteria 724
43 Ga0070659_100265046 3300005366 Bacteria 1426
44 Ga0070667_100380734 3300005367 Bacteria 1282
45 Ga0070713_100020203 3300005436 Bacteria 5101
46 Ga0070701_10206666 3300005438 Bacteria 1163
47 Ga0070700_100036867 3300005441 Bacteria 2969
48 Ga0070700_100325279 3300005441 Bacteria 1131
49 Ga0070700_100494720 3300005441 Unclassified 939
50 Ga0070694_100006677 3300005444 Bacteria 7009
51 Ga0070694_100184032 3300005444 Bacteria 1547
52 Ga0070663_100703534 3300005455 Bacteria 859
53 Ga0070662_100014482 3300005457 Bacteria 5272
54 Ga0070662_100149795 3300005457 Bacteria 1815
55 Ga0070662_100360521 3300005457 Bacteria 1193
56 Ga0070681_10710482 3300005458 Unclassified 921
57 Ga0068867_100104697 3300005459 Unclassified 2166
58 Ga0068867_100186946 3300005459 Bacteria 1650
59 Ga0070685_10479313 3300005466 Bacteria 877
60 Ga0070707_100138271 3300005468 Bacteria 2370
61 Ga0068853_100722838 3300005539 Bacteria 951
62 Ga0070672_100006955 3300005543 Bacteria 7650
63 Ga0070672_100048087 3300005543 Bacteria 3313
64 Ga0070686_100184574 3300005544 Bacteria 1484
65 Ga0070686_100285146 3300005544 Bacteria 1219
66 Ga0070695_100057033 3300005545 Unclassified 2522
67 Ga0070695_100073696 3300005545 Bacteria 2242
68 Ga0070696_100937627 3300005546 Bacteria 720
69 Ga0070665_100038175 3300005548 Bacteria 4828
70 Ga0070665_100045217 3300005548 Bacteria 4421
71 Ga0070665_100096828 3300005548 Unclassified 2956
72 Ga0070704_100025810 3300005549 Bacteria 3873
73 Ga0070704_100452715 3300005549 Bacteria 1105
74 Ga0070704_100894995 3300005549 Unclassified 798
75 Ga0070664_100231554 3300005564 Bacteria 1656
76 Ga0068854_100066071 3300005578 Bacteria 2631
77 Ga0068854_101358296 3300005578 Bacteria 641
78 Ga0070702_100060563 3300005615 Bacteria 2201
79 Ga0070702_100517104 3300005615 Unclassified 880
80 Ga0068859_100045758 3300005617 Bacteria 4396
81 Ga0068859_100105813 3300005617 Bacteria 2873
82 Ga0068864_100065348 3300005618 Bacteria 3156
83 Ga0068864_100227621 3300005618 Bacteria 1723
84 Ga0068866_10306500 3300005718 Bacteria 994
85 Ga0068861_100084732 3300005719 Unclassified 2489
86 Ga0068863_100064191 3300005841 Bacteria 3473
87 Ga0068863_100089839 3300005841 Bacteria 2913
88 Ga0068863_100474642 3300005841 Bacteria 1229
89 Ga0068858_100232627 3300005842 Bacteria 1747
90 Ga0068858_101228982 3300005842 Bacteria 737
91 Ga0068860_100027715 3300005843 Bacteria 5455
92 Ga0068862_100008919 3300005844 Bacteria 8304
93 Ga0068862_100295529 3300005844 Bacteria 1489
94 Ga0070717_10300775 3300006028 Unclassified 1426
95 Ga0075365_10000951 3300006038 Bacteria 12285
96 Ga0075365_10087804 3300006038 Bacteria 2115
97 Ga0075363_100011958 3300006048 Bacteria 4171
98 Ga0075364_10005737 3300006051 Bacteria 7239
99 Ga0075364_10022535 3300006051 Bacteria 3978
100 Ga0075364_10063833 3300006051 Bacteria 2418
101 Ga0075367_10009128 3300006178 Bacteria 5170
102 Ga0075367_10021440 3300006178 Bacteria 3610
103 Ga0075367_10124626 3300006178 Bacteria 1589
104 Ga0075366_10058936 3300006195 Bacteria 2281
105 Ga0075366_10066512 3300006195 Unclassified 2144
106 Ga0097621_100381805 3300006237 Bacteria 1258
107 Ga0097621_100873667 3300006237 Bacteria 836
108 Ga0068871_100164319 3300006358 Bacteria 1899
109 Ga0075431_100116777 3300006847 Bacteria 2754
110 Ga0075433_10513872 3300006852 Bacteria 1054
111 Ga0075434_100122208 3300006871 Bacteria 2620
112 Ga0075434_100218820 3300006871 Bacteria 1924
113 Ga0068865_100013448 3300006881 Bacteria 5171
114 Ga0068865_100762181 3300006881 Bacteria 832
115 Ga0097620_100045760 3300006931 Bacteria 4396
116 Ga0097620_100105814 3300006931 Bacteria 2873
117 Ga0075435_100000945 3300007076 Bacteria 18336
118 Ga0075435_100096891 3300007076 Bacteria 2440
119 Ga0075435_100147718 3300007076 Bacteria 1975
120 Ga0111539_10165574 3300009094 Bacteria 2585
121 Ga0111539_10477656 3300009094 Bacteria 1452
122 Ga0105245_10359574 3300009098 Unclassified 1445
123 Ga0114129_10012135 3300009147 Bacteria 12266
124 Ga0105243_10340407 3300009148 Bacteria 1374
125 Ga0105242_11592106 3300009176 Bacteria 687
126 Ga0105248_10346962 3300009177 Unclassified 1671
127 Ga0105248_11397117 3300009177 Unclassified 792
128 Ga0105238_11299314 3300009551 Bacteria 753
129 Ga0105249_10122348 3300009553 Bacteria 2474
130 Ga0105249_10865733 3300009553 Bacteria 970
131 Ga0105246_10584190 3300011119 Bacteria 963
132 Ga0157378_10290864 3300013297 Bacteria 1578
133 Ga0157375_10412416 3300013308 Unclassified 1517
134 Ga0163163_10039080 3300014325 Bacteria 4629
135 Ga0157380_10082648 3300014326 Bacteria 2629
136 Ga0157380_10303624 3300014326 Bacteria 1472
137 Ga0157380_10324331 3300014326 Bacteria 1429
138 Ga0207697_10000753 3300025315 Bacteria 18345
139 Ga0207682_10260668 3300025893 Unclassified 808
140 Ga0207688_10127986 3300025901 Bacteria 1487
141 Ga0207645_10012156 3300025907 Bacteria 5847
142 Ga0207684_10604306 3300025910 Bacteria 937
143 Ga0207660_10393144 3300025917 Unclassified 1116
144 Ga0207657_10332442 3300025919 Unclassified 1200
145 Ga0207657_10595951 3300025919 Bacteria 862
146 Ga0207646_10115521 3300025922 Bacteria 2411
147 Ga0207681_10298052 3300025923 Bacteria 1275
148 Ga0207650_10028707 3300025925 Bacteria 3992
149 Ga0207650_10063281 3300025925 Bacteria 2766
150 Ga0207659_10170454 3300025926 Bacteria 1717
151 Ga0207659_10313831 3300025926 Bacteria 1291
152 Ga0207659_10685340 3300025926 Unclassified 877
153 Ga0207659_10823640 3300025926 Bacteria 797
154 Ga0207659_11005511 3300025926 Unclassified 717
155 Ga0207659_11014534 3300025926 Bacteria 714
156 Ga0207700_10003078 3300025928 Bacteria 9625
157 Ga0207644_10043053 3300025931 Unclassified 3203
158 Ga0207644_10248377 3300025931 Bacteria 1419
159 Ga0207690_10224176 3300025932 Bacteria 1440
160 Ga0207690_10823966 3300025932 Bacteria 767
161 Ga0207706_10021337 3300025933 Bacteria 5819
162 Ga0207706_10184753 3300025933 Bacteria 1831
163 Ga0207706_10358481 3300025933 Bacteria 1267
164 Ga0207706_10736285 3300025933 Unclassified 841
165 Ga0207686_10040632 3300025934 Bacteria 2829
166 Ga0207686_10116403 3300025934 Bacteria 1812
167 Ga0207709_10015105 3300025935 Bacteria 4278
168 Ga0207704_10005234 3300025938 Bacteria 5975
169 Ga0207704_10163776 3300025938 Bacteria 1586
170 Ga0207691_10013344 3300025940 Bacteria 7868
171 Ga0207691_10043175 3300025940 Bacteria 4155
172 Ga0207691_10055851 3300025940 Bacteria 3598
173 Ga0207691_10067147 3300025940 Bacteria 3243
174 Ga0207689_10256254 3300025942 Bacteria 1447
175 Ga0207679_10467278 3300025945 Bacteria 1121
176 Ga0207679_10945336 3300025945 Bacteria 789
177 Ga0207651_10021769 3300025960 Unclassified 3904
178 Ga0207651_10045382 3300025960 Bacteria 2947
179 Ga0207651_10555431 3300025960 Bacteria 999
180 Ga0207712_10418661 3300025961 Bacteria 1130
181 Ga0207640_10063554 3300025981 Bacteria 2453
182 Ga0207658_10554279 3300025986 Bacteria 1029
183 Ga0207708_10001614 3300026075 Bacteria 16807
184 Ga0207708_10121076 3300026075 Bacteria 2039
185 Ga0207708_10593943 3300026075 Unclassified 937
186 Ga0207641_10695482 3300026088 Bacteria 1001
187 Ga0207648_10015816 3300026089 Bacteria 6917
188 Ga0207676_10074315 3300026095 Bacteria 2738
189 Ga0207676_10153634 3300026095 Bacteria 1985
190 Ga0207674_10827988 3300026116 Bacteria 893
191 Ga0207675_100277778 3300026118 Bacteria 1627
192 Ga0207675_100461464 3300026118 Bacteria 1260
193 Ga0207675_100877498 3300026118 Bacteria 913
194 Ga0207683_10102350 3300026121 Bacteria 2557
195 Ga0268266_10226124 3300028379 Bacteria 1722
196 Ga0268265_10019011 3300028380 Bacteria 4770
197 Ga0268265_10114598 3300028380 Bacteria 2208
198 Ga0268265_10211295 3300028380 Bacteria 1691
199 Ga0307408_100208476 3300031548 Bacteria 1587
200 Ga0307405_10270521 3300031731 Bacteria 1274
201 Ga0307413_10314396 3300031824 Bacteria 1194
202 Ga0307410_10301611 3300031852 Bacteria 1264
203 Ga0307409_101240349 3300031995 Bacteria 770
204 Ga0307416_100411821 3300032002 Bacteria 1393
205 Ga0307416_100660978 3300032002 Bacteria 1131
206 Ga0373944_0102192 3300035089 Bacteria 970
207 Ga0373952_0063968 3300035092 Bacteria 906
208 Ga0373936_0275164 3300035113 Bacteria 756
209 Ga0373945_0089187 3300035116 Bacteria 1192
210 Ga0373953_0102061 3300035117 Bacteria 1208
211 Ga0373957_0085560 3300035120 Bacteria 1248
212 Ga0373943_0045526 3300035170 Bacteria 2139
213 Ga0373962_0085363 3300035242 Bacteria 965
214 Ga0373933_0214387 3300035724 Bacteria 1234
215 Ga0373937_0088865 3300036401 Bacteria 2861
216 Ga0373925_0056072 3300037068 Bacteria 2951
217 Ga0439431_0069272 3300041997 Bacteria 938
218 Ga0450919_013123 3300042121 Unclassified 938
219 Ga0450923_081853 3300042125 Unclassified 727
220 Ga0450896_019209 3300042133 Bacteria 994
221 Ga0439434_0089494 3300042435 Bacteria 983
222 Ga0439435_0180508 3300042436 Unclassified 689
223 Ga0439459_0020679 3300042438 Unclassified 1258
224 Ga0439440_0037450 3300042993 Unclassified 1171
225 Ga0495592_0218147 3300046454 Bacteria 1277
226 Ga0495658_0148643 3300046683 Bacteria 1438
227 Ga0495672_0143133 3300047320 Unclassified 1247
228 Ga0495684_0490902 3300047471 Unclassified 846
229 Ga0496103_0273925 3300048906 Bacteria 1086
230 Ga0496106_0008904 3300048909 Bacteria 7419
231 Ga0496109_0049642 3300048912 Bacteria 3821
232 Ga0496109_0414296 3300048912 Bacteria 1273
233 Ga0496112_0586447 3300048915 Bacteria 1047
234 Ga0496113_0095499 3300048916 Bacteria 2298
235 Ga0496113_0676754 3300048916 Bacteria 824
236 Ga0501039_0850518 3300049575 Bacteria 711
237 Ga0501042_0250275 3300049578 Unclassified 1279
238 Ga0501048_0103588 3300049582 Unclassified 2008
239 Ga0501072_0469722 3300049588 Unclassified 996
240 Ga0501076_0176079 3300049592 Unclassified 1743
241 Ga0501045_0063552 3300049824 Unclassified 2709
242 nmdc:mga00v17_28425_c1 3300050491 Bacteria 3275
243 nmdc:mga00v17_46190_c1 3300050491 Bacteria 2634
244 nmdc:mga0yw44_334005_c1 3300050492 Bacteria 1019
245 nmdc:mga0k408_103652_c1 3300050493 Bacteria 1678
246 nmdc:mga0k408_180081_c1 3300050493 Bacteria 1260
247 nmdc:mga0k408_20377_c2 3300050493 Bacteria 1711
248 nmdc:mga06z11_42007_c1 3300050494 Bacteria 2291
249 nmdc:mga04h51_108906_c1 3300050495 Bacteria 1019
250 nmdc:mga07m45_104316_c1 3300050496 Bacteria 1630
251 nmdc:mga05p37_2876_c1 3300050507 Bacteria 19986
252 nmdc:mga08y16_1233827_c1 3300050511 Bacteria 717
253 nmdc:mga08y16_400291_c1 3300050511 Bacteria 1405
254 nmdc:mga0n895_225453_c1 3300050512 Bacteria 1902
255 nmdc:mga0n895_347454_c1 3300050512 Bacteria 1502
256 nmdc:mga0n895_88908_c2 3300050512 Unclassified 2189
257 nmdc:mga0rr50_154174_c1 3300050513 Bacteria 1859
258 nmdc:mga0rr50_691444_c1 3300050513 Bacteria 871
259 nmdc:mga0sz30_115662_c1 3300050516 Bacteria 1177
260 Ga0495601_0106754 3300053077 Bacteria 1811
261 Ga0500568_0003131 3300053139 Bacteria 9435
262 Ga0501084_0384506 3300054114 Archaea 1186
263 Ga0590074_000774 3300059423 Unclassified 4898
264 Ga0501082_0174605 3300060353 Unclassified 1868
265 Ga0530510_0147729 3300061734 Unclassified 1734
266 Ga0075368_10041729
267 Ga0065704_10251028
268 Ga0065712_10030767
269 Ga0065712_10076675
270 Ga0065712_10116322
271 Ga0065712_10121162
272 Ga0065715_10001743
273 Ga0065715_10043180
274 Ga0065715_10291133
275 Ga0065715_10329015
276 Ga0065707_10000834
277 Ga0065707_10004769
278 Ga0065707_10132132
279 Ga0070670_100008907
280 Ga0070670_100021234
281 Ga0070670_100304764
282 Ga0070670_100556898
283 Ga0070670_100670105
284 Ga0070677_10024905
285 Ga0068869_100360807
286 Ga0070666_10094800
287 Ga0070666_10938051
288 Ga0068868_100010525
289 Ga0068868_100017305
290 Ga0070689_100018035
291 Ga0070687_100722614
292 Ga0070692_10311316
293 Ga0070669_100052845
294 Ga0070669_100804967
295 Ga0070675_100206897
296 Ga0070675_100283653
297 Ga0070675_100906431
298 Ga0070671_100037771
299 Ga0070671_100225916
300 Ga0070671_100666327
301 Ga0070674_100038850
302 Ga0070674_100087634
303 Ga0070674_100319293
304 Ga0070674_100762283
305 Ga0070673_100080865
306 Ga0070673_100146968
307 Ga0070673_101156567
308 Ga0070659_100265046
309 Ga0070667_100380734
310 Ga0070713_100020203
311 Ga0070701_10206666
312 Ga0070700_100036867
313 Ga0070700_100325279
314 Ga0070700_100494720
315 Ga0070694_100006677
316 Ga0070694_100184032
317 Ga0070663_100703534
318 Ga0070662_100014482
319 Ga0070662_100149795
320 Ga0070662_100360521
321 Ga0070681_10710482
322 Ga0068867_100104697
323 Ga0068867_100186946
324 Ga0070685_10479313
325 Ga0070707_100138271
326 Ga0068853_100722838
327 Ga0070672_100006955
328 Ga0070672_100048087
329 Ga0070686_100184574
330 Ga0070686_100285146
331 Ga0070695_100057033
332 Ga0070695_100073696
333 Ga0070696_100937627
334 Ga0070665_100038175
335 Ga0070665_100045217
336 Ga0070665_100096828
337 Ga0070704_100025810
338 Ga0070704_100452715
339 Ga0070704_100894995
340 Ga0070664_100231554
341 Ga0068854_100066071
342 Ga0068854_101358296
343 Ga0070702_100060563
344 Ga0070702_100517104
345 Ga0068859_100045758
346 Ga0068859_100105813
347 Ga0068864_100065348
348 Ga0068864_100227621
349 Ga0068866_10306500
350 Ga0068861_100084732
351 Ga0068863_100064191
352 Ga0068863_100089839
353 Ga0068863_100474642
354 Ga0068858_100232627
355 Ga0068858_101228982
356 Ga0068860_100027715
357 Ga0068862_100008919
358 Ga0068862_100295529
359 Ga0070717_10300775
360 Ga0075365_10000951
361 Ga0075365_10087804
362 Ga0075363_100011958
363 Ga0075364_10005737
364 Ga0075364_10022535
365 Ga0075364_10063833
366 Ga0075367_10009128
367 Ga0075367_10021440
368 Ga0075367_10124626
369 Ga0075366_10058936
370 Ga0075366_10066512
371 Ga0097621_100381805
372 Ga0097621_100873667
373 Ga0068871_100164319
374 Ga0075431_100116777
375 Ga0075433_10513872
376 Ga0075434_100122208
377 Ga0075434_100218820
378 Ga0068865_100013448
379 Ga0068865_100762181
380 Ga0097620_100045760
381 Ga0097620_100105814
382 Ga0075435_100000945
383 Ga0075435_100096891
384 Ga0075435_100147718
385 Ga0111539_10165574
386 Ga0111539_10477656
387 Ga0105245_10359574
388 Ga0114129_10012135
389 Ga0105243_10340407
390 Ga0105242_11592106
391 Ga0105248_10346962
392 Ga0105248_11397117
393 Ga0105238_11299314
394 Ga0105249_10122348
395 Ga0105249_10865733
396 Ga0105246_10584190
397 Ga0157378_10290864
398 Ga0157375_10412416
399 Ga0163163_10039080
400 Ga0157380_10082648
401 Ga0157380_10303624
402 Ga0157380_10324331
403 Ga0207697_10000753
404 Ga0207682_10260668
405 Ga0207688_10127986
406 Ga0207645_10012156
407 Ga0207684_10604306
408 Ga0207660_10393144
409 Ga0207657_10332442
410 Ga0207657_10595951
411 Ga0207646_10115521
412 Ga0207681_10298052
413 Ga0207650_10028707
414 Ga0207650_10063281
415 Ga0207659_10170454
416 Ga0207659_10313831
417 Ga0207659_10685340
418 Ga0207659_10823640
419 Ga0207659_11005511
420 Ga0207659_11014534
421 Ga0207700_10003078
422 Ga0207644_10043053
423 Ga0207644_10248377
424 Ga0207690_10224176
425 Ga0207690_10823966
426 Ga0207706_10021337
427 Ga0207706_10184753
428 Ga0207706_10358481
429 Ga0207706_10736285
430 Ga0207686_10040632
431 Ga0207686_10116403
432 Ga0207709_10015105
433 Ga0207704_10005234
434 Ga0207704_10163776
435 Ga0207691_10013344
436 Ga0207691_10043175
437 Ga0207691_10055851
438 Ga0207691_10067147
439 Ga0207689_10256254
440 Ga0207679_10467278
441 Ga0207679_10945336
442 Ga0207651_10021769
443 Ga0207651_10045382
444 Ga0207651_10555431
445 Ga0207712_10418661
446 Ga0207640_10063554
447 Ga0207658_10554279
448 Ga0207708_10001614
449 Ga0207708_10121076
450 Ga0207708_10593943
451 Ga0207641_10695482
452 Ga0207648_10015816
453 Ga0207676_10074315
454 Ga0207676_10153634
455 Ga0207674_10827988
456 Ga0207675_100277778
457 Ga0207675_100461464
458 Ga0207675_100877498
459 Ga0207683_10102350
460 Ga0268266_10226124
461 Ga0268265_10019011
462 Ga0268265_10114598
463 Ga0268265_10211295
464 Ga0307408_100208476
465 Ga0307405_10270521
466 Ga0307413_10314396
467 Ga0307410_10301611
468 Ga0307409_101240349
469 Ga0307416_100411821
470 Ga0307416_100660978
471 Ga0373944_0102192
472 Ga0373952_0063968
473 Ga0373936_0275164
474 Ga0373945_0089187
475 Ga0373953_0102061
476 Ga0373957_0085560
477 Ga0373943_0045526
478 Ga0373962_0085363
479 Ga0373933_0214387
480 Ga0373937_0088865
481 Ga0373925_0056072
482 Ga0439431_0069272
483 Ga0450919_013123
484 Ga0450923_081853
485 Ga0450896_019209
486 Ga0439434_0089494
487 Ga0439435_0180508
488 Ga0439459_0020679
489 Ga0439440_0037450
490 Ga0495592_0218147
491 Ga0495658_0148643
492 Ga0495672_0143133
493 Ga0495684_0490902
494 Ga0496103_0273925
495 Ga0496106_0008904
496 Ga0496109_0049642
497 Ga0496109_0414296
498 Ga0496112_0586447
499 Ga0496113_0095499
500 Ga0496113_0676754
501 Ga0501039_0850518
502 Ga0501042_0250275
503 Ga0501048_0103588
504 Ga0501072_0469722
505 Ga0501076_0176079
506 Ga0501045_0063552
507 nmdc:mga00v17_28425_c1
508 nmdc:mga00v17_46190_c1
509 nmdc:mga0yw44_334005_c1
510 nmdc:mga0k408_103652_c1
511 nmdc:mga0k408_180081_c1
512 nmdc:mga0k408_20377_c2
513 nmdc:mga06z11_42007_c1
514 nmdc:mga04h51_108906_c1
515 nmdc:mga07m45_104316_c1
516 nmdc:mga05p37_2876_c1
517 nmdc:mga08y16_1233827_c1
518 nmdc:mga08y16_400291_c1
519 nmdc:mga0n895_225453_c1
520 nmdc:mga0n895_347454_c1
521 nmdc:mga0n895_88908_c2
522 nmdc:mga0rr50_154174_c1
523 nmdc:mga0rr50_691444_c1
524 nmdc:mga0sz30_115662_c1
525 Ga0495601_0106754
526 Ga0500568_0003131
527 Ga0501084_0384506
528 Ga0590074_000774
529 Ga0501082_0174605
530 Ga0530510_0147729

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02223

Thymidylate_kin

Thymidylate kinase

24

202

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2wwi-assembly2.cif.gz_B plasmodium falciparum thymidylate kinase in complex with aztmp and adp 0.9522 3 190
2wwf-assembly1.cif.gz_A plasmodium falciparum thymidylate kinase in complex with tmp and adp 0.9359 2 191
2wwi-assembly2.cif.gz_C plasmodium falciparum thymidylate kinase in complex with aztmp and adp 0.9335 2 190
2yog-assembly2.cif.gz_B plasmodium falciparum thymidylate kinase in complex with a (thio)urea- alpha-deoxythymidine inhibitor 0.9306 2 191
2yoh-assembly1.cif.gz_A plasmodium falciparum thymidylate kinase in complex with a urea-alpha- deoxythymidine inhibitor 0.9277 2 191
ID Description Score Start End Superfamily
af_P36590_1_207_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.957 2 191 3.40.50.300
af_A1ZB29_2_211_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9565 2 196 3.40.50.300
af_B7ZZT5_48_255_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9398 2 196 3.40.50.300
af_A1ZB29_2_211_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9332 2 196 3.40.50.300
af_Q57741_3_187_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.928 3 191 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3N5XS91-F1-model_v4 Thymidylate kinase (EC 2.7.4.9) (dTMP kinase) 0.9882 1 196 GO:0004798
GO:0005524
GO:0005737
GO:0006227
GO:0006233
GO:0006235
AF-A0A3N5NX07-F1-model_v4 Thymidylate kinase (EC 2.7.4.9) (dTMP kinase) 0.9879 1 194 GO:0004798
GO:0005524
GO:0005737
GO:0006227
GO:0006233
GO:0006235
AF-A0A3D4FPY2-F1-model_v4 Thymidylate kinase (EC 2.7.4.9) (dTMP kinase) 0.9851 2 196 GO:0004798
GO:0005524
GO:0005737
GO:0006227
GO:0006233
GO:0006235
AF-A0A3D2AZJ4-F1-model_v4 Thymidylate kinase-like domain-containing protein 0.9843 92 195 GO:0004798
GO:0005737
GO:0006227
GO:0006233
GO:0006235
AF-A0A7X3QCC9-F1-model_v4 dTMP kinase (EC 2.7.4.9) 0.9839 4 183 GO:0004798
GO:0005524
GO:0005737
GO:0006227
GO:0006233
GO:0006235

Map