F373193

General Info

Members Datasets Scaffolds Average Seq Length
265 214 209 523

Family's Representative Sequence

Representative Sequence 3300005719|Ga0068861_100109977|Ga0068861_1001099772
Length 551
Sequence MISTSGKPNDYQVVVVGFGPTGAVATSLLGKRGIRTLAIDRLRTVYDKPRAIAMDHEILRLLDNLGIADRILPHVAPFPASQHFGAAGQLIRRIDMVPEPYPLGYTPTMVFTQPPVEAVLRENAASYASVKVELGTEFVGLAQSDTGVRLELLGDDGGTRSVTADYVIACDGASSEVREHVGIALEDLVFDEPWLVVDVLVNEEALGKLPQTAAQYCDPARPTTFIIGPRNHRRWEIMLLPSEDPQAAQKPERVWQLLSKWLTPDEATLWRAASYRFHALVASEWRRGRVFLAGDAAHQQPPFIGQGMCQGLRDSANLVWKLDHVLHGHSGEALLDSYGEERGDHVRELTTRIKAIGQVICERDPQAARERDLRILAEGGGEARTITRQEIVPPLRKGLFAAADESAKQSAKGTLFPQPRILGDHGPMLLDAAFGAGWRLCIDGRAAFELTDLVRRQIDELALATFHIGTALDAASLAPEADRRQIVVELDGVMAGWFDRHGCRAAIVRPDHYVFGVARDIATLTGVLRELRDRLLESRPQSLSITTREIR

Samples

Sample ID Description Type Environment
1 2508501050 Microvirga lupini Lut6 Isolate Nodule
2 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
3 2511231028 Bradyrhizobium sp. YR681 Isolate Rhizosphere
4 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
5 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
6 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
7 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
8 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
9 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
10 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
11 2643221558 Rhizobium sp. Root149 Isolate Unclassified
12 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
13 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
14 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
15 2791355196 Bradyrhizobium sp. Y36 Isolate Nodule
16 2802429633 Rhizobium anhuiense J3 Isolate Nodule
17 2802429634 Rhizobium anhuiense S10 Isolate Nodule
18 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
19 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
20 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
21 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
22 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
23 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
24 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
25 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
26 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
27 2851182111 Bosea sp. Tri-44 Isolate Nodule
28 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
29 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
30 2874628541 Bradyrhizobium betae Opo-243 Isolate Unclassified
31 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
32 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
33 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
34 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
35 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
36 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
37 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
38 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
39 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
40 2919073203 Tardiphaga robiniae 1155 Isolate Unclassified
41 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
42 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
43 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
44 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
45 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
46 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
47 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
48 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
49 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
50 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
51 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
52 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
53 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
54 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
55 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
56 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
57 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
58 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
59 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
60 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
61 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
62 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
63 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
64 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
65 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
66 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
67 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
68 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
69 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
70 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
71 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
72 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
73 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
74 3300006941 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW Metagenome Nodule
75 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
76 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
77 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
78 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
79 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
80 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
81 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
82 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
83 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
84 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
85 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
86 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
87 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
88 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
89 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
90 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
91 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
92 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
93 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
95 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
97 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
98 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
99 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
101 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
111 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
112 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
113 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
114 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
118 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
119 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
120 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
121 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
122 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
123 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
124 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
125 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
126 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
127 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
128 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
129 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
130 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
131 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
134 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
135 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
136 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
137 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
138 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
139 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
140 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
141 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
142 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
143 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
144 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
145 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
146 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
147 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
148 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
149 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
150 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
151 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
152 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
153 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
154 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
155 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
156 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
157 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
158 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
159 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
160 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
161 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
162 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
163 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
164 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
165 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
166 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
167 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
168 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
169 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
170 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
171 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
172 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
173 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
174 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
175 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
176 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
177 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
178 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
179 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
180 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
181 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
182 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
183 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
184 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
185 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
186 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
187 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
188 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
189 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
190 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
191 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
192 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
193 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
194 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
195 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
196 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
197 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
198 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
199 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
200 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
201 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
202 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
203 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
204 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
205 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
206 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
207 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
208 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
209 8006926726 Bradyrhizobium guangdongense SM32 Isolate Unclassified
210 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
211 8019648815 Bradyrhizobium sp. GM24.11 Isolate Nodule
212 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
213 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
214 8056967851 Bradyrhizobium zhengyangense WYCCWR 12678 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 78.87
Metatranscriptomes 0
Isolates 21.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 28.3
Nodule 11.32
Rhizoplane 3.77
Rhizosphere 32.83
Stem 0
Stem Tuber 0
Unclassified 23.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000079 3300001979 Bacteria 32962
2 JGI25162J39368_1000175 3300002737 Bacteria 68975
3 JGI25152J39213_1000799 3300002773 Bacteria 15775
4 JGI25152J39213_1001021 3300002773 Bacteria 13419
5 JGI25150J39212_1000389 3300002774 Bacteria 20909
6 JGI25151J46595_10001494 3300003187 Bacteria 15730
7 JGI25151J46595_10008070 3300003187 Bacteria 5100
8 JGI25165J46597_1000345 3300003214 Bacteria 53409
9 JGI25153J46596_10001335 3300003215 Bacteria 14754
10 JGI25153J46596_10009958 3300003215 Bacteria 4347
11 JGI25160J50197_1000641 3300003354 Bacteria 19480
12 Ga0055526_1004243 3300003771 Bacteria 8687
13 Ga0055526_1006269 3300003771 Bacteria 6510
14 Ga0055524_1006432 3300003775 Bacteria 5092
15 Ga0055536_1006518 3300003781 Bacteria 5426
16 Ga0055528_1000735 3300003790 Bacteria 22884
17 Ga0055540_1004104 3300003792 Bacteria 6743
18 Ga0055531_10000703 3300003794 Bacteria 28514
19 Ga0065165_1002233 3300005262 Bacteria 17217
20 Ga0065165_1003188 3300005262 Bacteria 12006
21 Ga0068856_100170422 3300005614 Bacteria 2189
22 Ga0068861_100109977 3300005719 Bacteria 2207
23 Ga0068860_100003575 3300005843 Bacteria 15979
24 Ga0081540_1030093 3300005983 Bacteria 3013
25 Ga0070717_10012301 3300006028 Bacteria 6523
26 Ga0075365_10001772 3300006038 Bacteria 10058
27 Ga0075362_10003132 3300006177 Bacteria 5713
28 Ga0075367_10002650 3300006178 Bacteria 8239
29 Ga0075367_10017565 3300006178 Bacteria 3929
30 Ga0075369_10000625 3300006186 Bacteria 11210
31 Ga0075369_10002475 3300006186 Bacteria 6590
32 Ga0075370_10004392 3300006353 Bacteria 6840
33 Ga0075430_100011250 3300006846 Bacteria 7590
34 Ga0099825_1024992 3300006941 Bacteria 3395
35 Ga0099824_1025307 3300006942 Bacteria 3277
36 Ga0099823_1031432 3300006944 Bacteria 4379
37 Ga0099794_10000959 3300007265 Bacteria 9725
38 Ga0105240_10252066 3300009093 Bacteria 2041
39 Ga0105247_10022383 3300009101 Bacteria 3806
40 Ga0105241_10014680 3300009174 Bacteria 5733
41 Ga0105237_10007922 3300009545 Bacteria 11578
42 Ga0105249_10044236 3300009553 Bacteria 4049
43 Ga0105239_10005744 3300010375 Bacteria 14475
44 Ga0105239_10022800 3300010375 Bacteria 6902
45 Ga0105239_10145625 3300010375 Bacteria 2641
46 Ga0163163_10157260 3300014325 Bacteria 2317
47 Ga0157380_10136772 3300014326 Bacteria 2098
48 Ga0182007_10006181 3300015262 Bacteria 5167
49 Ga0214544_1018730 3300021320 Bacteria 5603
50 Ga0213875_10016381 3300021388 Bacteria 3594
51 Ga0209437_100300 3300025233 Bacteria 69341
52 Ga0207425_1000618 3300025245 Bacteria 20377
53 Ga0207425_1001484 3300025245 Bacteria 9756
54 Ga0209129_1000257 3300025258 Bacteria 54146
55 Ga0209129_1000816 3300025258 Bacteria 19635
56 Ga0209129_1005973 3300025258 Bacteria 4098
57 Ga0209233_1000314 3300025261 Bacteria 54407
58 Ga0209233_1000801 3300025261 Bacteria 14074
59 Ga0209455_1002114 3300025272 Bacteria 7901
60 Ga0209673_1001789 3300025273 Bacteria 17771
61 Ga0209673_1001994 3300025273 Bacteria 15802
62 Ga0209676_1000698 3300025292 Bacteria 47152
63 Ga0209025_1000142 3300025294 Bacteria 183903
64 Ga0209025_1001697 3300025294 Bacteria 26886
65 Ga0209025_1018198 3300025294 Bacteria 4005
66 Ga0209564_1001507 3300025295 Bacteria 23305
67 Ga0209758_1000318 3300025297 Bacteria 92807
68 Ga0209758_1000534 3300025297 Bacteria 60556
69 Ga0209758_1000542 3300025297 Bacteria 59932
70 Ga0209758_1002204 3300025297 Bacteria 20359
71 Ga0209758_1005735 3300025297 Bacteria 9356
72 Ga0209758_1006741 3300025297 Bacteria 8079
73 Ga0209256_1003902 3300025299 Bacteria 9864
74 Ga0207426_1000624 3300025302 Bacteria 44994
75 Ga0209051_1000923 3300025303 Bacteria 29174
76 Ga0209051_1001956 3300025303 Bacteria 15846
77 Ga0209257_1000897 3300025304 Bacteria 41804
78 Ga0209257_1000953 3300025304 Bacteria 39797
79 Ga0209257_1001807 3300025304 Bacteria 23473
80 Ga0207654_10004761 3300025911 Bacteria 6873
81 Ga0207654_10008162 3300025911 Bacteria 5280
82 Ga0207695_10000015 3300025913 Bacteria 803205
83 Ga0207671_10005956 3300025914 Bacteria 11047
84 Ga0207678_10074030 3300026067 Bacteria 2918
85 Ga0207641_10105788 3300026088 Bacteria 2486
86 Ga0207648_10107207 3300026089 Bacteria 2452
87 Ga0207675_100097354 3300026118 Bacteria 2771
88 Ga0209389_1000057 3300027296 Bacteria 107632
89 Ga0209389_1001047 3300027296 Bacteria 18502
90 Ga0209589_1000676 3300027357 Bacteria 49982
91 Ga0209489_100062 3300027361 Bacteria 145478
92 Ga0209489_115130 3300027361 Bacteria 4934
93 Ga0209700_100085 3300027363 Bacteria 128517
94 Ga0209588_1000527 3300027671 Bacteria 9799
95 Ga0268265_10032614 3300028380 Bacteria 3777
96 Ga0268264_10000051 3300028381 Bacteria 321565
97 Ga0265337_1004237 3300028556 Bacteria 5998
98 Ga0265319_1003570 3300028563 Bacteria 8069
99 Ga0265334_10002364 3300028573 Bacteria 8881
100 Ga0265323_10003046 3300028653 Bacteria 7466
101 Ga0307515_10021771 3300028794 Bacteria 11343
102 Ga0265338_10001265 3300028800 Bacteria 41690
103 Ga0265324_10003890 3300029957 Bacteria 6958
104 Ga0307509_10070901 3300031507 Bacteria 3637
105 Ga0307411_10053844 3300032005 Bacteria 2639
106 Ga0373935_0031612 3300035692 Bacteria 3286
107 Ga0373947_0079141 3300035725 Bacteria 2031
108 Ga0436364_1183789 3300037853 Bacteria 3771
109 Ga0436364_1493770 3300037853 Bacteria 7511
110 Ga0451833_0745759 3300041491 Bacteria 6291
111 Ga0466972_0017926 3300044658 Bacteria 3541
112 Ga0466968_0010982 3300044735 Bacteria 3520
113 Ga0451576_0059710 3300045051 Bacteria 3981
114 Ga0495592_0007754 3300046454 Bacteria 8043
115 Ga0495638_0013900 3300046460 Bacteria 5460
116 Ga0495638_0029861 3300046460 Bacteria 3514
117 Ga0495641_0041174 3300046461 Bacteria 2147
118 Ga0495651_0001882 3300046462 Bacteria 16229
119 Ga0495582_0025505 3300046473 Bacteria 3239
120 Ga0495664_0004819 3300046477 Bacteria 7377
121 Ga0495583_0032138 3300046506 Bacteria 2536
122 Ga0495608_0053018 3300046511 Bacteria 2684
123 Ga0495628_0025770 3300046516 Bacteria 4801
124 Ga0495631_0015934 3300046518 Bacteria 3592
125 Ga0495632_0013063 3300046519 Bacteria 4758
126 Ga0495648_0060314 3300046524 Bacteria 2258
127 Ga0495652_0001609 3300046529 Bacteria 24670
128 Ga0495654_0000200 3300046530 Bacteria 57799
129 Ga0495640_0023957 3300046533 Bacteria 4441
130 Ga0495587_0007333 3300046536 Bacteria 7149
131 Ga0495645_0102456 3300046543 Bacteria 2034
132 Ga0495622_0006090 3300046557 Bacteria 5604
133 Ga0495667_0005949 3300046559 Bacteria 8255
134 Ga0495656_0005761 3300046615 Bacteria 4300
135 Ga0495668_0024915 3300046616 Bacteria 3401
136 Ga0495625_0016230 3300046660 Bacteria 5865
137 Ga0495635_0011145 3300046663 Bacteria 6303
138 Ga0495635_0011150 3300046663 Bacteria 6302
139 Ga0495657_0000620 3300046675 Bacteria 32206
140 Ga0495646_0053367 3300046680 Bacteria 2437
141 Ga0495624_0014954 3300046690 Bacteria 5256
142 Ga0495670_0005187 3300046691 Bacteria 6410
143 Ga0495600_0005776 3300046809 Bacteria 7475
144 Ga0495600_0006648 3300046809 Bacteria 7044
145 Ga0495581_0051689 3300047315 Bacteria 2373
146 Ga0495604_0000700 3300047317 Bacteria 28451
147 Ga0495674_0009244 3300047319 Bacteria 9368
148 Ga0495674_0045544 3300047319 Bacteria 3895
149 Ga0495676_0020847 3300047321 Bacteria 5741
150 Ga0495680_0020048 3300047322 Bacteria 5635
151 Ga0495684_0026012 3300047471 Bacteria 4498
152 Ga0495602_0002073 3300048088 Bacteria 20164
153 Ga0496102_0002868 3300048905 Bacteria 14645
154 Ga0496104_0000983 3300048907 Bacteria 24362
155 Ga0496104_0065430 3300048907 Bacteria 3450
156 Ga0496105_0003614 3300048908 Bacteria 11492
157 Ga0496108_0023775 3300048911 Bacteria 5043
158 Ga0496110_0005421 3300048913 Bacteria 10006
159 Ga0496112_0001623 3300048915 Bacteria 17418
160 Ga0496113_0027891 3300048916 Bacteria 4054
161 Ga0496116_0004634 3300048919 Bacteria 13025
162 Ga0496117_0025807 3300048920 Bacteria 4609
163 Ga0496117_0027047 3300048920 Bacteria 4476
164 Ga0496117_0079574 3300048920 Bacteria 2159
165 Ga0496118_0007780 3300048921 Bacteria 11254
166 Ga0496118_0020164 3300048921 Bacteria 5923
167 Ga0496118_0023053 3300048921 Bacteria 5420
168 Ga0496119_0003070 3300048922 Bacteria 17640
169 Ga0496119_0013559 3300048922 Bacteria 6478
170 Ga0496120_0005084 3300048923 Bacteria 10645
171 Ga0496120_0035378 3300048923 Bacteria 2983
172 Ga0496121_0003172 3300048924 Bacteria 23706
173 Ga0496121_0034960 3300048924 Bacteria 4511
174 Ga0496121_0064927 3300048924 Bacteria 2973
175 Ga0496122_0003130 3300048925 Bacteria 22152
176 Ga0496122_0016834 3300048925 Bacteria 6880
177 Ga0496123_0002768 3300048926 Bacteria 20955
178 Ga0496123_0029080 3300048926 Bacteria 4079
179 Ga0496124_0003129 3300048927 Bacteria 20505
180 Ga0496124_0045503 3300048927 Bacteria 3762
181 Ga0496124_0060248 3300048927 Bacteria 3185
182 Ga0496125_0000199 3300048928 Bacteria 126676
183 Ga0496125_0001625 3300048928 Bacteria 31663
184 Ga0496125_0023250 3300048928 Bacteria 5725
185 Ga0496125_0024839 3300048928 Bacteria 5499
186 Ga0496126_0014907 3300048929 Bacteria 7838
187 Ga0496126_0023708 3300048929 Bacteria 5944
188 nmdc:mga03683_32255_c1 3300050489 Bacteria 2107
189 nmdc:mga0yw44_30229_c1 3300050492 Bacteria 3136
190 nmdc:mga06z11_16330_c1 3300050494 Bacteria 3341
191 nmdc:mga07m45_21438_c1 3300050496 Bacteria 3518
192 nmdc:mga0qj67_79334_c1 3300050509 Bacteria 2629
193 nmdc:mga0sz30_25392_c1 3300050516 Bacteria 2423
194 nmdc:mga0sz30_3036_c1 3300050516 Bacteria 6013
195 nmdc:mga0sz30_6734_c1 3300050516 Bacteria 4282
196 Ga0500635_0018474 3300053080 Bacteria 2105
197 Ga0495619_0009307 3300053085 Bacteria 6201
198 Ga0500641_0007522 3300053096 Bacteria 3885
199 Ga0500650_0002802 3300053098 Bacteria 5874
200 Ga0500556_0000045 3300053104 Bacteria 130653
201 Ga0500593_022421 3300053117 Bacteria 2789
202 Ga0500642_0000024 3300053130 Bacteria 134373
203 Ga0500652_000135 3300053131 Bacteria 27760
204 Ga0500590_022133 3300053148 Bacteria 3300
205 Ga0500604_0000270 3300053151 Bacteria 14474
206 Ga0500616_0000054 3300053153 Bacteria 290186
207 Ga0500622_0000950 3300053156 Bacteria 24650
208 Ga0500636_0000147 3300053177 Bacteria 36797
209 Ga0500637_0072166 3300053178 Bacteria 1986

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046511 Ga0495608_0053018 Ga0495608_0053018_1309_2598 424
2 3300005614 Ga0068856_100170422 Ga0068856_1001704222 448
3 3300006846 Ga0075430_100011250 Ga0075430_1000112503 449
4 3300032005 Ga0307411_10053844 Ga0307411_100538442 449
5 3300050509 nmdc:mga0qj67_79334_c1 nmdc:mga0qj67_79334_c1_1126_2487 453
6 3300048927 Ga0496124_0060248 Ga0496124_0060248_1111_2589 492
7 3300026089 Ga0207648_10107207 Ga0207648_101072072 493
8 3300025911 Ga0207654_10004761 Ga0207654_100047616 495
9 iso_pu_bacteria 2913308742 2913309447 496
10 3300003771 Ga0055526_1004243 Ga0055526_10042433 502
11 3300003771 Ga0055526_1006269 Ga0055526_10062695 502
12 3300003775 Ga0055524_1006432 Ga0055524_10064322 502
13 3300003790 Ga0055528_1000735 Ga0055528_10007355 502
14 3300006177 Ga0075362_10003132 Ga0075362_100031322 502
15 3300006178 Ga0075367_10002650 Ga0075367_100026502 502
16 3300006186 Ga0075369_10000625 Ga0075369_100006252 502
17 3300006353 Ga0075370_10004392 Ga0075370_100043923 502
18 3300025273 Ga0209673_1001789 Ga0209673_100178914 502
19 3300025273 Ga0209673_1001994 Ga0209673_10019945 502
20 3300025295 Ga0209564_1001507 Ga0209564_100150713 502
21 3300025299 Ga0209256_1003902 Ga0209256_10039026 502
22 3300025303 Ga0209051_1001956 Ga0209051_100195612 502
23 3300050489 nmdc:mga03683_32255_c1 nmdc:mga03683_32255_c1_40_1617 502
24 3300050492 nmdc:mga0yw44_30229_c1 nmdc:mga0yw44_30229_c1_939_2516 502
25 3300050496 nmdc:mga07m45_21438_c1 nmdc:mga07m45_21438_c1_1461_3038 502
26 3300050516 nmdc:mga0sz30_25392_c1 nmdc:mga0sz30_25392_c1_605_2182 502
27 3300021388 Ga0213875_10016381 Ga0213875_100163812 503
28 3300037853 Ga0436364_1183789 Ga0436364_1183789_677_2254 503
29 3300046454 Ga0495592_0007754 Ga0495592_0007754_2276_3901 503
30 3300046462 Ga0495651_0001882 Ga0495651_0001882_10167_11792 503
31 3300046477 Ga0495664_0004819 Ga0495664_0004819_2103_3728 503
32 3300046516 Ga0495628_0025770 Ga0495628_0025770_943_2568 503
33 3300046529 Ga0495652_0001609 Ga0495652_0001609_10987_12612 503
34 3300046533 Ga0495640_0023957 Ga0495640_0023957_1008_2633 503
35 3300046536 Ga0495587_0007333 Ga0495587_0007333_1247_2872 503
36 3300046543 Ga0495645_0102456 Ga0495645_0102456_203_1828 503
37 3300046559 Ga0495667_0005949 Ga0495667_0005949_5186_6811 503
38 3300046663 Ga0495635_0011150 Ga0495635_0011150_3809_5434 503
39 3300046675 Ga0495657_0000620 Ga0495657_0000620_14277_15902 503
40 3300046680 Ga0495646_0053367 Ga0495646_0053367_69_1694 503
41 3300046809 Ga0495600_0006648 Ga0495600_0006648_1296_2921 503
42 3300047317 Ga0495604_0000700 Ga0495604_0000700_15663_17288 503
43 3300047319 Ga0495674_0009244 Ga0495674_0009244_4923_6548 503
44 3300047322 Ga0495680_0020048 Ga0495680_0020048_3633_5258 503
45 3300047471 Ga0495684_0026012 Ga0495684_0026012_570_2195 503
46 3300048088 Ga0495602_0002073 Ga0495602_0002073_2430_4055 503
47 3300053085 Ga0495619_0009307 Ga0495619_0009307_2463_4088 503
48 3300010375 Ga0105239_10005744 Ga0105239_1000574411 510
49 3300025272 Ga0209455_1002114 Ga0209455_10021143 510
50 3300048920 Ga0496117_0025807 Ga0496117_0025807_2345_3877 510
51 3300003187 JGI25151J46595_10008070 JGI25151J46595_100080704 511
52 3300005262 Ga0065165_1003188 Ga0065165_10031881 511
53 3300006038 Ga0075365_10001772 Ga0075365_100017729 511
54 3300025258 Ga0209129_1005973 Ga0209129_10059732 511
55 3300025294 Ga0209025_1001697 Ga0209025_100169726 511
56 3300025297 Ga0209758_1000534 Ga0209758_10005347 511
57 3300050494 nmdc:mga06z11_16330_c1 nmdc:mga06z11_16330_c1_507_2114 512
58 iso_pu_bacteria 2602042107 2603860471 512
59 iso_pu_bacteria 2857524615 2857525422 513
60 iso_pu_bacteria 2919073203 2919074888 513
61 iso_pu_bacteria 8006926726 8006927928 513
62 3300028556 Ga0265337_1004237 Ga0265337_10042375 514
63 3300028563 Ga0265319_1003570 Ga0265319_10035706 514
64 3300028573 Ga0265334_10002364 Ga0265334_100023646 514
65 3300028653 Ga0265323_10003046 Ga0265323_100030465 514
66 3300028800 Ga0265338_10001265 Ga0265338_100012655 514
67 3300029957 Ga0265324_10003890 Ga0265324_100038905 514
68 iso_pu_bacteria 2844315083 2844318508 514
69 iso_pu_bacteria 2903727486 2903730127 514
70 iso_pu_bacteria 2906602504 2906603512 514
71 iso_pu_bacteria 3005718088 3005721784 514
72 iso_pu_bacteria 8056967851 8056972871 514
73 3300006186 Ga0075369_10002475 Ga0075369_100024754 516
74 3300048919 Ga0496116_0004634 Ga0496116_0004634_5767_7332 516
75 3300048920 Ga0496117_0027047 Ga0496117_0027047_1150_2715 516
76 3300048920 Ga0496117_0079574 Ga0496117_0079574_41_1606 516
77 3300048921 Ga0496118_0020164 Ga0496118_0020164_1822_3387 516
78 3300048921 Ga0496118_0023053 Ga0496118_0023053_3514_5079 516
79 3300048925 Ga0496122_0016834 Ga0496122_0016834_2765_4330 516
80 3300048926 Ga0496123_0029080 Ga0496123_0029080_1976_3541 516
81 3300048928 Ga0496125_0023250 Ga0496125_0023250_669_2234 516
82 3300048928 Ga0496125_0024839 Ga0496125_0024839_1727_3277 516
83 3300050516 nmdc:mga0sz30_3036_c1 nmdc:mga0sz30_3036_c1_2198_3763 516
84 iso_pu_bacteria 2904479285 2904479369 516
85 3300026067 Ga0207678_10074030 Ga0207678_100740302 517
86 3300046460 Ga0495638_0013900 Ga0495638_0013900_1902_3470 517
87 3300046460 Ga0495638_0029861 Ga0495638_0029861_1815_3383 517
88 3300046506 Ga0495583_0032138 Ga0495583_0032138_139_1707 517
89 3300046518 Ga0495631_0015934 Ga0495631_0015934_236_1804 517
90 3300046660 Ga0495625_0016230 Ga0495625_0016230_1939_3507 517
91 3300046691 Ga0495670_0005187 Ga0495670_0005187_2279_3847 517
92 3300048923 Ga0496120_0035378 Ga0496120_0035378_1259_2827 517
93 3300048928 Ga0496125_0001625 Ga0496125_0001625_29427_30995 517
94 3300053096 Ga0500641_0007522 Ga0500641_0007522_1833_3401 517
95 3300053098 Ga0500650_0002802 Ga0500650_0002802_2795_4363 517
96 3300053104 Ga0500556_0000045 Ga0500556_0000045_31896_33464 517
97 3300053117 Ga0500593_022421 Ga0500593_022421_925_2493 517
98 3300053130 Ga0500642_0000024 Ga0500642_0000024_35818_37386 517
99 3300053131 Ga0500652_000135 Ga0500652_000135_11084_12652 517
100 3300053151 Ga0500604_0000270 Ga0500604_0000270_11739_13307 517
101 3300053153 Ga0500616_0000054 Ga0500616_0000054_34813_36381 517
102 3300053156 Ga0500622_0000950 Ga0500622_0000950_18686_20254 517
103 iso_pu_bacteria 2511231028 2511398669 517
104 iso_pu_bacteria 2513237104 2513717033 517
105 3300006028 Ga0070717_10012301 Ga0070717_100123012 518
106 3300045051 Ga0451576_0059710 Ga0451576_0059710_1989_3575 518
107 iso_pu_bacteria 2513237092 2513623590 518
108 iso_pu_bacteria 2517093001 2517105142 518
109 iso_pu_bacteria 2558860983 2561467426 518
110 iso_pu_bacteria 2791355196 2793063452 518
111 iso_pu_bacteria 2824679649 2824681210 518
112 iso_pu_bacteria 2824704595 2824709650 518
113 iso_pu_bacteria 2824753945 2824756277 518
114 iso_pu_bacteria 2824763712 2824763961 518
115 iso_pu_bacteria 2841957949 2841960537 518
116 iso_pu_bacteria 2847930680 2847938681 518
117 iso_pu_bacteria 2874620515 2874626152 518
118 iso_pu_bacteria 2874628541 2874634618 518
119 iso_pu_bacteria 2879083081 2879088345 518
120 iso_pu_bacteria 2904666416 2904669170 518
121 iso_pu_bacteria 2904711408 2904720455 518
122 iso_pu_bacteria 2906643746 2906644947 518
123 iso_pu_bacteria 2922393267 2922399433 518
124 iso_pu_bacteria 2941531003 2941534260 518
125 iso_pu_bacteria 3005483717 3005488642 518
126 iso_pu_bacteria 3005587118 3005594741 518
127 iso_pu_bacteria 8019648815 8019659357 518
128 3300009093 Ga0105240_10252066 Ga0105240_102520662 519
129 3300009174 Ga0105241_10014680 Ga0105241_100146803 519
130 3300009545 Ga0105237_10007922 Ga0105237_100079222 519
131 3300010375 Ga0105239_10145625 Ga0105239_101456252 519
132 3300014326 Ga0157380_10136772 Ga0157380_101367721 519
133 3300025911 Ga0207654_10008162 Ga0207654_100081626 519
134 3300025913 Ga0207695_10000015 Ga0207695_10000015688 519
135 3300025914 Ga0207671_10005956 Ga0207671_100059569 519
136 3300046461 Ga0495641_0041174 Ga0495641_0041174_143_1717 519
137 3300046557 Ga0495622_0006090 Ga0495622_0006090_3072_4646 519
138 3300046663 Ga0495635_0011145 Ga0495635_0011145_4634_6208 519
139 3300046690 Ga0495624_0014954 Ga0495624_0014954_1528_3102 519
140 3300046809 Ga0495600_0005776 Ga0495600_0005776_1889_3463 519
141 3300047315 Ga0495581_0051689 Ga0495581_0051689_645_2219 519
142 3300047321 Ga0495676_0020847 Ga0495676_0020847_1890_3464 519
143 3300048907 Ga0496104_0000983 Ga0496104_0000983_13300_14874 519
144 3300048908 Ga0496105_0003614 Ga0496105_0003614_2115_3692 519
145 3300048916 Ga0496113_0027891 Ga0496113_0027891_301_1878 519
146 3300048922 Ga0496119_0003070 Ga0496119_0003070_13639_15213 519
147 3300048923 Ga0496120_0005084 Ga0496120_0005084_2115_3689 519
148 3300048924 Ga0496121_0034960 Ga0496121_0034960_2838_4415 519
149 3300048927 Ga0496124_0045503 Ga0496124_0045503_1134_2708 519
150 3300048929 Ga0496126_0014907 Ga0496126_0014907_5540_7114 519
151 3300053148 Ga0500590_022133 Ga0500590_022133_734_2308 519
152 3300053177 Ga0500636_0000147 Ga0500636_0000147_9875_11488 519
153 iso_pu_bacteria 2738541317 2738944826 519
154 iso_pu_bacteria 2919171160 2919176754 519
155 3300003354 JGI25160J50197_1000641 JGI25160J50197_10006418 520
156 3300025302 Ga0207426_1000624 Ga0207426_100062446 520
157 3300037853 Ga0436364_1493770 Ga0436364_1493770_2267_3844 520
158 iso_pu_bacteria 8055431914 8055434907 520
159 3300005262 Ga0065165_1002233 Ga0065165_10022337 521
160 3300009101 Ga0105247_10022383 Ga0105247_100223832 521
161 3300031507 Ga0307509_10070901 Ga0307509_100709013 521
162 3300046473 Ga0495582_0025505 Ga0495582_0025505_693_2273 521
163 3300046519 Ga0495632_0013063 Ga0495632_0013063_2336_3916 521
164 3300046616 Ga0495668_0024915 Ga0495668_0024915_755_2335 521
165 3300048921 Ga0496118_0007780 Ga0496118_0007780_9018_10622 521
166 3300048924 Ga0496121_0064927 Ga0496121_0064927_136_1740 521
167 3300048929 Ga0496126_0023708 Ga0496126_0023708_2364_3986 521
168 iso_pu_bacteria 2510917026 2511175137 521
169 iso_pu_bacteria 2515154114 2515644626 521
170 iso_pu_bacteria 2615840698 2616555284 521
171 iso_pu_bacteria 2643221558 2643814508 521
172 iso_pu_bacteria 2738541333 2739038358 521
173 iso_pu_bacteria 2802429633 2806047830 521
174 iso_pu_bacteria 2802429634 2806055468 521
175 iso_pu_bacteria 2802429635 2806061511 521
176 iso_pu_bacteria 2802429636 2806070214 521
177 iso_pu_bacteria 2851182111 2851184165 521
178 iso_pu_bacteria 2899803654 2899808490 521
179 iso_pu_bacteria 2919408235 2919413436 521
180 iso_pu_bacteria 8005570704 8005575608 521
181 iso_pu_bacteria 8005658619 8005661038 521
182 iso_pu_bacteria 8005682033 8005685694 521
183 iso_pu_bacteria 8018150411 8018154708 521
184 iso_pu_bacteria 8049293176 8049297049 521
185 3300003215 JGI25153J46596_10001335 JGI25153J46596_1000133511 522
186 3300005983 Ga0081540_1030093 Ga0081540_10300932 522
187 3300006941 Ga0099825_1024992 Ga0099825_10249922 522
188 3300006942 Ga0099824_1025307 Ga0099824_10253073 522
189 3300006944 Ga0099823_1031432 Ga0099823_10314323 522
190 3300010375 Ga0105239_10022800 Ga0105239_100228003 522
191 3300014325 Ga0163163_10157260 Ga0163163_101572602 522
192 3300021320 Ga0214544_1018730 Ga0214544_10187304 522
193 3300025261 Ga0209233_1000801 Ga0209233_100080112 522
194 3300025297 Ga0209758_1000318 Ga0209758_100031814 522
195 3300025297 Ga0209758_1006741 Ga0209758_10067415 522
196 3300027296 Ga0209389_1000057 Ga0209389_10000579 522
197 3300027296 Ga0209389_1001047 Ga0209389_10010474 522
198 3300027357 Ga0209589_1000676 Ga0209589_100067639 522
199 3300027361 Ga0209489_100062 Ga0209489_100062147 522
200 3300027361 Ga0209489_115130 Ga0209489_1151303 522
201 3300027363 Ga0209700_100085 Ga0209700_10008526 522
202 3300028794 Ga0307515_10021771 Ga0307515_100217718 522
203 3300044658 Ga0466972_0017926 Ga0466972_0017926_1723_3348 522
204 3300046524 Ga0495648_0060314 Ga0495648_0060314_370_1977 522
205 3300048905 Ga0496102_0002868 Ga0496102_0002868_4482_6089 522
206 3300048907 Ga0496104_0065430 Ga0496104_0065430_162_1769 522
207 3300048911 Ga0496108_0023775 Ga0496108_0023775_1033_2640 522
208 3300048913 Ga0496110_0005421 Ga0496110_0005421_2293_3900 522
209 3300048915 Ga0496112_0001623 Ga0496112_0001623_10370_11977 522
210 3300048922 Ga0496119_0013559 Ga0496119_0013559_3188_4795 522
211 3300050516 nmdc:mga0sz30_6734_c1 nmdc:mga0sz30_6734_c1_1943_3550 522
212 3300053080 Ga0500635_0018474 Ga0500635_0018474_70_1692 522
213 iso_pu_bacteria 2775506901 2776266837 522
214 3300003781 Ga0055536_1006518 Ga0055536_10065184 523
215 3300003792 Ga0055540_1004104 Ga0055540_10041043 523
216 3300003794 Ga0055531_10000703 Ga0055531_100007033 523
217 3300005843 Ga0068860_100003575 Ga0068860_10000357510 523
218 3300025292 Ga0209676_1000698 Ga0209676_10006981 523
219 3300025297 Ga0209758_1005735 Ga0209758_10057353 523
220 3300025303 Ga0209051_1000923 Ga0209051_100092310 523
221 3300025304 Ga0209257_1000897 Ga0209257_100089710 523
222 3300025304 Ga0209257_1000953 Ga0209257_100095327 523
223 3300027671 Ga0209588_1000527 Ga0209588_10005279 523
224 3300028381 Ga0268264_10000051 Ga0268264_10000051117 523
225 3300035692 Ga0373935_0031612 Ga0373935_0031612_149_1735 523
226 3300035725 Ga0373947_0079141 Ga0373947_0079141_203_1789 523
227 3300047319 Ga0495674_0045544 Ga0495674_0045544_1869_3455 523
228 3300048928 Ga0496125_0000199 Ga0496125_0000199_48584_50212 523
229 3300053178 Ga0500637_0072166 Ga0500637_0072166_282_1868 523
230 iso_pu_bacteria 2508501050 2508728219 523
231 3300025304 Ga0209257_1001807 Ga0209257_10018071 524
232 3300028380 Ga0268265_10032614 Ga0268265_100326142 524
233 3300046530 Ga0495654_0000200 Ga0495654_0000200_32483_34057 524
234 3300002773 JGI25152J39213_1001021 JGI25152J39213_10010212 525
235 3300003215 JGI25153J46596_10009958 JGI25153J46596_100099582 525
236 3300005719 Ga0068861_100109977 Ga0068861_1001099772 525
237 3300006178 Ga0075367_10017565 Ga0075367_100175652 525
238 3300009553 Ga0105249_10044236 Ga0105249_100442362 525
239 3300015262 Ga0182007_10006181 Ga0182007_100061814 525
240 3300025233 Ga0209437_100300 Ga0209437_10030041 525
241 3300025245 Ga0207425_1000618 Ga0207425_100061811 525
242 3300025245 Ga0207425_1001484 Ga0207425_100148412 525
243 3300025258 Ga0209129_1000257 Ga0209129_100025753 525
244 3300025258 Ga0209129_1000816 Ga0209129_100081611 525
245 3300025261 Ga0209233_1000314 Ga0209233_100031441 525
246 3300025294 Ga0209025_1000142 Ga0209025_1000142164 525
247 3300025294 Ga0209025_1018198 Ga0209025_10181982 525
248 3300025297 Ga0209758_1000542 Ga0209758_100054213 525
249 3300025297 Ga0209758_1002204 Ga0209758_100220411 525
250 3300026118 Ga0207675_100097354 Ga0207675_1000973542 525
251 3300041491 Ga0451833_0745759 Ga0451833_0745759_2601_4178 525
252 3300046615 Ga0495656_0005761 Ga0495656_0005761_925_2562 525
253 3300002773 JGI25152J39213_1000799 JGI25152J39213_10007996 527
254 3300002774 JGI25150J39212_1000389 JGI25150J39212_100038912 527
255 3300003187 JGI25151J46595_10001494 JGI25151J46595_100014946 527
256 3300048924 Ga0496121_0003172 Ga0496121_0003172_1155_2738 527
257 3300048925 Ga0496122_0003130 Ga0496122_0003130_9311_10894 527
258 3300048926 Ga0496123_0002768 Ga0496123_0002768_10535_12118 527
259 3300048927 Ga0496124_0003129 Ga0496124_0003129_10528_12111 527
260 3300026088 Ga0207641_10105788 Ga0207641_101057882 529
261 3300007265 Ga0099794_10000959 Ga0099794_100009594 532
262 3300044735 Ga0466968_0010982 Ga0466968_0010982_1670_3370 534
263 3300001979 JGI24740J21852_10000079 JGI24740J21852_1000007914 536
264 3300002737 JGI25162J39368_1000175 JGI25162J39368_100017541 536
265 3300003214 JGI25165J46597_1000345 JGI25165J46597_100034542 536

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01494

FAD_binding_3

FAD binding domain

10

353

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6eod-assembly1.cif.gz_H structure of reductive aminase from aspergillus terreus in complex with nadph 0.9598 22 52
6hrd-assembly2.cif.gz_D crystal structure of m. tuberculosis fadb2 (rv0468) 0.9547 22 50
4oqy-assembly1.cif.gz_A streptomyces sp. gf3546 imine reductase 0.9521 22 52
6eod-assembly4.cif.gz_E structure of reductive aminase from aspergillus terreus in complex with nadph 0.9518 22 52
6eoh-assembly1.cif.gz_B reductive aminase from aspergillus terreus in complex with nadph and ethyl levulinate 0.9517 21 52
ID Description Score Start End Superfamily
af_I6XF25_1_136_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9943 23 52 3.40.50.720
1z47B03 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9735 147 176 2.40.50.140
af_P9WN19_146_269_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.964 24 53 3.50.50.60
af_Q2FZH1_2_136_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.963 22 52 3.40.50.720
af_Q60E84_301_451_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.959 22 50 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6J4Q660-F1-model_v4 3-(3-hydroxy-phenyl)propanoic acid hydroxylase (EC 1.14.13.127) 0.966 21 457 GO:0008688
GO:0019622
GO:0071949
AF-X8AEY5-F1-model_v4 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase (EC 1.14.13.127) 0.9522 50 388 GO:0008688
GO:0019622
GO:0071949
AF-X1HUA0-F1-model_v4 FAD-binding domain-containing protein 0.9502 52 314 GO:0008688
GO:0019622
GO:0071949
AF-A0A423D3J5-F1-model_v4 deleted 0.9483 22 535
AF-A0A2M6VJI8-F1-model_v4 FAD-binding monooxygenase 0.9466 10 528 GO:0008688
GO:0019622
GO:0071949

Feature Viewer

pLDDT pTM Quality
90.51 0.9 High
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Predicted Structure (AlphaFold2)

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