F372886

General Info

Members Datasets Scaffolds Average Seq Length
264 193 528 174

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0296571|Ga0501034_0296571_247_852
Length 201
Sequence MMLADPEADSARERITHNGAMTGSLALVPALGHPELLAAPVAAALRALGDAAAAVDVAPIDPGLADTAAFCAAYGVGLDISANCVVIAGRRGEETRYAACVVLATTRADVNGVVRKLLDARKASFAPMDDAVALTGMEYGGITPIGLPDDWALYLDARIPALPRAIVGSGIRGSKIELPGAVLASLPHAQVIEGLARDVAE

Samples

Sample ID Description Type Environment
1 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300012498 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410 Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
109 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
110 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
111 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
112 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
113 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
114 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
115 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
116 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
117 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
118 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
119 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
120 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
121 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
122 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
123 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
124 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
125 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
126 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
127 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
128 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
129 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
132 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
133 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
134 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
135 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
136 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
137 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
138 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
139 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
140 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
141 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
144 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
147 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
148 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
149 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
150 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
164 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
165 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
166 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
167 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
168 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
169 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
170 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
174 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
178 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
179 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
180 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
181 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
182 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
183 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
184 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
185 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
186 2501939600 Micromonospora sp. L5 Isolate Unclassified
187 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
188 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
189 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
190 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
191 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
192 649633069 Micromonospora sp. L5 Isolate Unclassified
193 8002775197 Frankia nepalensis CN7 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.21
Metatranscriptomes 0.76
Isolates 3.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.14
Nodule 0.38
Rhizoplane 6.44
Rhizosphere 84.85
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501034_0296571 3300049571 Bacteria 1554
2 JGI25406J46586_10010840 3300003203 Bacteria 4020
3 Ga0070683_100446512 3300005329 Bacteria 1234
4 Ga0070683_100520296 3300005329 Bacteria 1137
5 Ga0070683_100737917 3300005329 Bacteria 943
6 Ga0068869_100030266 3300005334 Bacteria 3799
7 Ga0070666_10043612 3300005335 Bacteria 3004
8 Ga0070680_100168924 3300005336 Bacteria 1840
9 Ga0070682_100037080 3300005337 Bacteria 2983
10 Ga0068868_100007369 3300005338 Bacteria 7837
11 Ga0070660_100014676 3300005339 Bacteria 5651
12 Ga0070692_10004035 3300005345 Bacteria 6067
13 Ga0070692_10010177 3300005345 Bacteria 4271
14 Ga0070668_100007292 3300005347 Bacteria 8203
15 Ga0070675_100042173 3300005354 Bacteria 3728
16 Ga0070671_100012694 3300005355 Bacteria 6789
17 Ga0070671_100376822 3300005355 Bacteria 1212
18 Ga0070659_100042546 3300005366 Bacteria 3552
19 Ga0070659_100157788 3300005366 Bacteria 1854
20 Ga0070709_10030292 3300005434 Bacteria 3245
21 Ga0070714_100025027 3300005435 Bacteria 4922
22 Ga0070714_100232009 3300005435 Bacteria 1701
23 Ga0070713_100088365 3300005436 Bacteria 2660
24 Ga0070710_10145895 3300005437 Bacteria 1455
25 Ga0070705_100021049 3300005440 Bacteria 3463
26 Ga0070694_100012187 3300005444 Bacteria 5341
27 Ga0070708_100384411 3300005445 Bacteria 1323
28 Ga0070662_100023107 3300005457 Bacteria 4267
29 Ga0070681_10148766 3300005458 Bacteria 2269
30 Ga0068867_100065307 3300005459 Bacteria 2708
31 Ga0070679_100010637 3300005530 Bacteria 8731
32 Ga0070684_100184972 3300005535 Bacteria 1895
33 Ga0068853_100331629 3300005539 Bacteria 1412
34 Ga0070696_100009835 3300005546 Bacteria 6394
35 Ga0070693_100018774 3300005547 Bacteria 3617
36 Ga0070665_100365306 3300005548 Bacteria 1450
37 Ga0070665_100474435 3300005548 Bacteria 1262
38 Ga0068855_100008907 3300005563 Bacteria 12130
39 Ga0068855_100260476 3300005563 Bacteria 1932
40 Ga0070664_100020057 3300005564 Bacteria 5503
41 Ga0068857_100099723 3300005577 Bacteria 2605
42 Ga0068857_100557799 3300005577 Bacteria 1080
43 Ga0068857_100830075 3300005577 Bacteria 884
44 Ga0068856_100099294 3300005614 Bacteria 2902
45 Ga0068856_100130843 3300005614 Bacteria 2514
46 Ga0068856_100483368 3300005614 Bacteria 1259
47 Ga0068864_100040659 3300005618 Bacteria 3977
48 Ga0068864_100325798 3300005618 Bacteria 1444
49 Ga0068861_100002895 3300005719 Bacteria 11310
50 Ga0068851_10537078 3300005834 Bacteria 705
51 Ga0068858_100000080 3300005842 Bacteria 100656
52 Ga0081455_10013311 3300005937 Bacteria 8142
53 Ga0081539_10000809 3300005985 Bacteria 60775
54 Ga0081539_10001034 3300005985 Bacteria 51315
55 Ga0070717_10440082 3300006028 Bacteria 1174
56 Ga0070716_100059198 3300006173 Bacteria 2207
57 Ga0075430_100123757 3300006846 Bacteria 2156
58 Ga0075433_10045579 3300006852 Bacteria 3812
59 Ga0075435_100174301 3300007076 Bacteria 1816
60 Ga0105240_10011180 3300009093 Bacteria 12529
61 Ga0105240_10069848 3300009093 Bacteria 4346
62 Ga0105240_10563505 3300009093 Bacteria 1259
63 Ga0105240_10643090 3300009093 Bacteria 1163
64 Ga0111539_10343745 3300009094 Bacteria 1737
65 Ga0111539_10739394 3300009094 Bacteria 1145
66 Ga0105245_10006809 3300009098 Bacteria 10025
67 Ga0105245_10275669 3300009098 Bacteria 1642
68 Ga0105245_10459073 3300009098 Bacteria 1284
69 Ga0105243_10034445 3300009148 Bacteria 3920
70 Ga0105242_10030584 3300009176 Bacteria 4300
71 Ga0105248_10026234 3300009177 Bacteria 6483
72 Ga0105248_10050827 3300009177 Bacteria 4650
73 Ga0105238_10012600 3300009551 Bacteria 8536
74 Ga0105249_10003400 3300009553 Bacteria 13784
75 Ga0105246_10007493 3300011119 Bacteria 6690
76 Ga0157345_1020849 3300012498 Bacteria 667
77 Ga0157371_10080256 3300013102 Bacteria 2310
78 Ga0157371_10277034 3300013102 Bacteria 1211
79 Ga0157370_10012783 3300013104 Bacteria 8681
80 Ga0157370_10139316 3300013104 Bacteria 2260
81 Ga0157369_10024308 3300013105 Bacteria 6743
82 Ga0157369_10131345 3300013105 Bacteria 2654
83 Ga0157369_11048962 3300013105 Bacteria 834
84 Ga0157374_10045184 3300013296 Bacteria 4076
85 Ga0157374_10284242 3300013296 Bacteria 1634
86 Ga0157374_11217468 3300013296 Bacteria 774
87 Ga0157378_10271555 3300013297 Bacteria 1631
88 Ga0163162_10014986 3300013306 Bacteria 7573
89 Ga0157372_10044915 3300013307 Bacteria 4897
90 Ga0157372_10235737 3300013307 Bacteria 2122
91 Ga0157375_10398782 3300013308 Bacteria 1542
92 Ga0163163_10008613 3300014325 Bacteria 9070
93 Ga0163163_10055068 3300014325 Bacteria 3931
94 Ga0163163_10390077 3300014325 Bacteria 1450
95 Ga0157380_10013459 3300014326 Bacteria 5964
96 Ga0157377_10005654 3300014745 Bacteria 5893
97 Ga0163161_10007540 3300017792 Bacteria 7521
98 Ga0206356_11553540 3300020070 Bacteria 2591
99 Ga0206353_10057171 3300020082 Bacteria 2536
100 Ga0207705_10019911 3300025909 Bacteria 4800
101 Ga0207654_10000003 3300025911 Bacteria 1030378
102 Ga0207695_10000617 3300025913 Bacteria 71447
103 Ga0207695_10192915 3300025913 Bacteria 1954
104 Ga0207671_10007124 3300025914 Bacteria 9765
105 Ga0207663_10272797 3300025916 Bacteria 1253
106 Ga0207660_10055800 3300025917 Bacteria 2825
107 Ga0207660_10116297 3300025917 Bacteria 2020
108 Ga0207660_10867813 3300025917 Bacteria 736
109 Ga0207662_10023883 3300025918 Bacteria 3515
110 Ga0207657_10016789 3300025919 Bacteria 7048
111 Ga0207652_11050533 3300025921 Bacteria 714
112 Ga0207681_10394287 3300025923 Bacteria 1117
113 Ga0207659_10247935 3300025926 Bacteria 1444
114 Ga0207687_10008098 3300025927 Bacteria 6877
115 Ga0207687_10439194 3300025927 Bacteria 1080
116 Ga0207700_10177364 3300025928 Bacteria 1781
117 Ga0207700_10256521 3300025928 Bacteria 1495
118 Ga0207664_10122330 3300025929 Bacteria 2180
119 Ga0207644_10078879 3300025931 Bacteria 2428
120 Ga0207690_10046733 3300025932 Bacteria 2869
121 Ga0207690_10099997 3300025932 Bacteria 2069
122 Ga0207706_10004600 3300025933 Bacteria 12947
123 Ga0207670_10170968 3300025936 Bacteria 1629
124 Ga0207665_10004230 3300025939 Bacteria 9556
125 Ga0207665_10310377 3300025939 Bacteria 1181
126 Ga0207711_10035864 3300025941 Bacteria 4205
127 Ga0207711_10042631 3300025941 Bacteria 3867
128 Ga0207689_10041451 3300025942 Bacteria 3810
129 Ga0207661_10007943 3300025944 Bacteria 7564
130 Ga0207661_10161755 3300025944 Bacteria 1943
131 Ga0207679_10141968 3300025945 Bacteria 1942
132 Ga0207667_10013323 3300025949 Bacteria 9417
133 Ga0207667_10131685 3300025949 Bacteria 2576
134 Ga0207667_10352838 3300025949 Bacteria 1500
135 Ga0207667_10447818 3300025949 Bacteria 1312
136 Ga0207651_10449852 3300025960 Bacteria 1105
137 Ga0207668_10066329 3300025972 Bacteria 2558
138 Ga0207658_10021759 3300025986 Bacteria 4456
139 Ga0207658_10253398 3300025986 Bacteria 1497
140 Ga0207677_10427348 3300026023 Bacteria 1130
141 Ga0207703_10000033 3300026035 Bacteria 187752
142 Ga0207678_10186603 3300026067 Bacteria 1771
143 Ga0207702_10491917 3300026078 Bacteria 1195
144 Ga0207702_10646688 3300026078 Bacteria 1040
145 Ga0207641_10055205 3300026088 Bacteria 3373
146 Ga0207676_10136255 3300026095 Bacteria 2095
147 Ga0207676_10381765 3300026095 Bacteria 1312
148 Ga0207674_10107046 3300026116 Bacteria 2773
149 Ga0207675_100024285 3300026118 Bacteria 5636
150 Ga0207683_10802226 3300026121 Bacteria 874
151 Ga0207698_10194005 3300026142 Bacteria 1812
152 Ga0268264_10251009 3300028381 Bacteria 1643
153 Ga0307515_10027498 3300028794 Bacteria 9722
154 Ga0265338_10019115 3300028800 Bacteria 7291
155 Ga0265338_10040968 3300028800 Bacteria 4340
156 Ga0307512_10010513 3300030522 Bacteria 8818
157 Ga0265340_10004948 3300031247 Bacteria 7407
158 Ga0265327_10136458 3300031251 Bacteria 1150
159 Ga0307513_10311165 3300031456 Bacteria 1337
160 Ga0307516_10027830 3300031730 Bacteria 5728
161 Ga0307507_10054255 3300033179 Bacteria 3816
162 Ga0373938_0002268 3300034957 Bacteria 3090
163 Ga0373929_0002570 3300035085 Bacteria 3334
164 Ga0373940_0017950 3300035088 Bacteria 1769
165 Ga0373939_0008881 3300035114 Bacteria 2476
166 Ga0373962_0005937 3300035242 Bacteria 2948
167 Ga0373931_0010002 3300035691 Bacteria 4547
168 Ga0451837_0202515 3300041494 Bacteria 833
169 Ga0451851_1118234 3300041507 Bacteria 666
170 Ga0466969_0044242 3300044656 Bacteria 2216
171 Ga0466969_0056950 3300044656 Bacteria 1907
172 Ga0466966_0018194 3300044684 Bacteria 4636
173 Ga0466966_0200165 3300044684 Bacteria 1209
174 Ga0466966_0335589 3300044684 Bacteria 908
175 Ga0466961_0013774 3300044693 Bacteria 5182
176 Ga0466961_0174956 3300044693 Bacteria 1334
177 Ga0466961_0267785 3300044693 Bacteria 1047
178 Ga0466968_0132607 3300044735 Bacteria 1135
179 Ga0466970_0106543 3300044765 Bacteria 1529
180 Ga0466960_0013370 3300044901 Bacteria 3486
181 Ga0466960_0046356 3300044901 Bacteria 2081
182 Ga0466959_0069040 3300045049 Bacteria 2561
183 Ga0466959_0147517 3300045049 Bacteria 1659
184 Ga0466959_0407858 3300045049 Bacteria 923
185 Ga0466967_0040529 3300045976 Bacteria 4010
186 Ga0495629_0257284 3300046459 Bacteria 1200
187 Ga0495594_0136127 3300046499 Bacteria 1392
188 Ga0495606_0149673 3300046507 Bacteria 1371
189 Ga0495609_0281951 3300046538 Bacteria 679
190 Ga0496101_0522072 3300048904 Bacteria 938
191 Ga0496102_0084115 3300048905 Bacteria 2936
192 Ga0496103_0018992 3300048906 Bacteria 4127
193 Ga0496103_0098528 3300048906 Bacteria 1848
194 Ga0496105_0245324 3300048908 Bacteria 1452
195 Ga0496107_0121991 3300048910 Bacteria 1920
196 Ga0496108_0014756 3300048911 Bacteria 6377
197 Ga0496108_0320459 3300048911 Bacteria 1351
198 Ga0496108_0915289 3300048911 Bacteria 752
199 Ga0496109_0009761 3300048912 Bacteria 8192
200 Ga0496109_0404012 3300048912 Bacteria 1290
201 Ga0496109_0522802 3300048912 Bacteria 1120
202 Ga0496109_0675127 3300048912 Bacteria 970
203 Ga0496110_0019588 3300048913 Bacteria 5698
204 Ga0496111_0080816 3300048914 Bacteria 2372
205 Ga0496112_0092076 3300048915 Bacteria 3001
206 Ga0496112_0391347 3300048915 Bacteria 1330
207 Ga0496117_0296016 3300048920 Bacteria 859
208 Ga0496118_0150138 3300048921 Bacteria 1460
209 Ga0496119_0002555 3300048922 Bacteria 19813
210 Ga0496119_0011782 3300048922 Bacteria 7185
211 Ga0496120_0049690 3300048923 Bacteria 2406
212 Ga0496120_0329369 3300048923 Bacteria 691
213 Ga0501031_0174585 3300049568 Bacteria 1404
214 Ga0501032_0480926 3300049569 Bacteria 794
215 Ga0501033_0295341 3300049570 Bacteria 1142
216 Ga0501034_0006108 3300049571 Bacteria 12994
217 Ga0501034_0511565 3300049571 Bacteria 1113
218 Ga0501036_0065944 3300049572 Bacteria 3063
219 Ga0501037_0033868 3300049573 Bacteria 3772
220 Ga0501037_0314001 3300049573 Bacteria 1086
221 Ga0501038_0401484 3300049574 Bacteria 1060
222 Ga0501038_0523090 3300049574 Bacteria 905
223 Ga0501039_0052201 3300049575 Bacteria 3164
224 Ga0501040_0059532 3300049576 Bacteria 2624
225 Ga0501041_0538892 3300049577 Bacteria 743
226 Ga0501042_0033078 3300049578 Bacteria 3665
227 Ga0501043_0232499 3300049579 Bacteria 1424
228 Ga0501043_0248946 3300049579 Bacteria 1369
229 Ga0501046_0195320 3300049580 Bacteria 1508
230 Ga0501047_0133313 3300049581 Bacteria 2364
231 Ga0501067_0209725 3300049583 Bacteria 1085
232 Ga0501071_0035235 3300049587 Bacteria 3564
233 Ga0501072_0235178 3300049588 Bacteria 1459
234 Ga0501075_0054030 3300049591 Bacteria 3021
235 Ga0501076_0119551 3300049592 Bacteria 2133
236 Ga0501077_0386142 3300049593 Bacteria 895
237 Ga0501079_0026925 3300049741 Bacteria 4409
238 Ga0501081_0151486 3300049743 Bacteria 1666
239 Ga0501035_0018048 3300049822 Bacteria 6502
240 Ga0501035_0291416 3300049822 Bacteria 1377
241 Ga0501044_0006190 3300049823 Bacteria 13226
242 Ga0501044_0140530 3300049823 Bacteria 2404
243 Ga0501045_0011812 3300049824 Bacteria 6136
244 Ga0501045_0628230 3300049824 Bacteria 794
245 nmdc:mga0qj67_68599_c1 3300050509 Bacteria 2826
246 nmdc:mga08y16_519297_c1 3300050511 Bacteria 1208
247 nmdc:mga0n895_20064_c1 3300050512 Bacteria 6224
248 nmdc:mga0rr50_28881_c1 3300050513 Bacteria 3904
249 nmdc:mga08x19_28165_c1 3300050514 Bacteria 3516
250 nmdc:mga0a205_42822_c1 3300050515 Bacteria 4364
251 Ga0500646_0077961 3300053090 Bacteria 1006
252 Ga0500568_0008601 3300053139 Bacteria 4906
253 Ga0500616_0000145 3300053153 Bacteria 120927
254 Ga0501084_0100885 3300054114 Bacteria 2423
255 Ga0501082_0040877 3300060353 Bacteria 3998
256 Ga0530510_0051991 3300061734 Bacteria 2961
257 2501943146 2501939600 Bacteria 6907073
258 2676486924 2675903059 Bacteria 8644972
259 2856859698 2856858025 Bacteria 7255264
260 2857738952 2857737099 Bacteria 3104305
261 2974298285 2974294766 Bacteria 3767688
262 2974325485 2974324384 Bacteria 3750535
263 649810188 649633069 Bacteria 6962533
264 8002776858 8002775197 Bacteria 10728764
265 Ga0501034_0296571
266 JGI25406J46586_10010840
267 Ga0070683_100446512
268 Ga0070683_100520296
269 Ga0070683_100737917
270 Ga0068869_100030266
271 Ga0070666_10043612
272 Ga0070680_100168924
273 Ga0070682_100037080
274 Ga0068868_100007369
275 Ga0070660_100014676
276 Ga0070692_10004035
277 Ga0070692_10010177
278 Ga0070668_100007292
279 Ga0070675_100042173
280 Ga0070671_100012694
281 Ga0070671_100376822
282 Ga0070659_100042546
283 Ga0070659_100157788
284 Ga0070709_10030292
285 Ga0070714_100025027
286 Ga0070714_100232009
287 Ga0070713_100088365
288 Ga0070710_10145895
289 Ga0070705_100021049
290 Ga0070694_100012187
291 Ga0070708_100384411
292 Ga0070662_100023107
293 Ga0070681_10148766
294 Ga0068867_100065307
295 Ga0070679_100010637
296 Ga0070684_100184972
297 Ga0068853_100331629
298 Ga0070696_100009835
299 Ga0070693_100018774
300 Ga0070665_100365306
301 Ga0070665_100474435
302 Ga0068855_100008907
303 Ga0068855_100260476
304 Ga0070664_100020057
305 Ga0068857_100099723
306 Ga0068857_100557799
307 Ga0068857_100830075
308 Ga0068856_100099294
309 Ga0068856_100130843
310 Ga0068856_100483368
311 Ga0068864_100040659
312 Ga0068864_100325798
313 Ga0068861_100002895
314 Ga0068851_10537078
315 Ga0068858_100000080
316 Ga0081455_10013311
317 Ga0081539_10000809
318 Ga0081539_10001034
319 Ga0070717_10440082
320 Ga0070716_100059198
321 Ga0075430_100123757
322 Ga0075433_10045579
323 Ga0075435_100174301
324 Ga0105240_10011180
325 Ga0105240_10069848
326 Ga0105240_10563505
327 Ga0105240_10643090
328 Ga0111539_10343745
329 Ga0111539_10739394
330 Ga0105245_10006809
331 Ga0105245_10275669
332 Ga0105245_10459073
333 Ga0105243_10034445
334 Ga0105242_10030584
335 Ga0105248_10026234
336 Ga0105248_10050827
337 Ga0105238_10012600
338 Ga0105249_10003400
339 Ga0105246_10007493
340 Ga0157345_1020849
341 Ga0157371_10080256
342 Ga0157371_10277034
343 Ga0157370_10012783
344 Ga0157370_10139316
345 Ga0157369_10024308
346 Ga0157369_10131345
347 Ga0157369_11048962
348 Ga0157374_10045184
349 Ga0157374_10284242
350 Ga0157374_11217468
351 Ga0157378_10271555
352 Ga0163162_10014986
353 Ga0157372_10044915
354 Ga0157372_10235737
355 Ga0157375_10398782
356 Ga0163163_10008613
357 Ga0163163_10055068
358 Ga0163163_10390077
359 Ga0157380_10013459
360 Ga0157377_10005654
361 Ga0163161_10007540
362 Ga0206356_11553540
363 Ga0206353_10057171
364 Ga0207705_10019911
365 Ga0207654_10000003
366 Ga0207695_10000617
367 Ga0207695_10192915
368 Ga0207671_10007124
369 Ga0207663_10272797
370 Ga0207660_10055800
371 Ga0207660_10116297
372 Ga0207660_10867813
373 Ga0207662_10023883
374 Ga0207657_10016789
375 Ga0207652_11050533
376 Ga0207681_10394287
377 Ga0207659_10247935
378 Ga0207687_10008098
379 Ga0207687_10439194
380 Ga0207700_10177364
381 Ga0207700_10256521
382 Ga0207664_10122330
383 Ga0207644_10078879
384 Ga0207690_10046733
385 Ga0207690_10099997
386 Ga0207706_10004600
387 Ga0207670_10170968
388 Ga0207665_10004230
389 Ga0207665_10310377
390 Ga0207711_10035864
391 Ga0207711_10042631
392 Ga0207689_10041451
393 Ga0207661_10007943
394 Ga0207661_10161755
395 Ga0207679_10141968
396 Ga0207667_10013323
397 Ga0207667_10131685
398 Ga0207667_10352838
399 Ga0207667_10447818
400 Ga0207651_10449852
401 Ga0207668_10066329
402 Ga0207658_10021759
403 Ga0207658_10253398
404 Ga0207677_10427348
405 Ga0207703_10000033
406 Ga0207678_10186603
407 Ga0207702_10491917
408 Ga0207702_10646688
409 Ga0207641_10055205
410 Ga0207676_10136255
411 Ga0207676_10381765
412 Ga0207674_10107046
413 Ga0207675_100024285
414 Ga0207683_10802226
415 Ga0207698_10194005
416 Ga0268264_10251009
417 Ga0307515_10027498
418 Ga0265338_10019115
419 Ga0265338_10040968
420 Ga0307512_10010513
421 Ga0265340_10004948
422 Ga0265327_10136458
423 Ga0307513_10311165
424 Ga0307516_10027830
425 Ga0307507_10054255
426 Ga0373938_0002268
427 Ga0373929_0002570
428 Ga0373940_0017950
429 Ga0373939_0008881
430 Ga0373962_0005937
431 Ga0373931_0010002
432 Ga0451837_0202515
433 Ga0451851_1118234
434 Ga0466969_0044242
435 Ga0466969_0056950
436 Ga0466966_0018194
437 Ga0466966_0200165
438 Ga0466966_0335589
439 Ga0466961_0013774
440 Ga0466961_0174956
441 Ga0466961_0267785
442 Ga0466968_0132607
443 Ga0466970_0106543
444 Ga0466960_0013370
445 Ga0466960_0046356
446 Ga0466959_0069040
447 Ga0466959_0147517
448 Ga0466959_0407858
449 Ga0466967_0040529
450 Ga0495629_0257284
451 Ga0495594_0136127
452 Ga0495606_0149673
453 Ga0495609_0281951
454 Ga0496101_0522072
455 Ga0496102_0084115
456 Ga0496103_0018992
457 Ga0496103_0098528
458 Ga0496105_0245324
459 Ga0496107_0121991
460 Ga0496108_0014756
461 Ga0496108_0320459
462 Ga0496108_0915289
463 Ga0496109_0009761
464 Ga0496109_0404012
465 Ga0496109_0522802
466 Ga0496109_0675127
467 Ga0496110_0019588
468 Ga0496111_0080816
469 Ga0496112_0092076
470 Ga0496112_0391347
471 Ga0496117_0296016
472 Ga0496118_0150138
473 Ga0496119_0002555
474 Ga0496119_0011782
475 Ga0496120_0049690
476 Ga0496120_0329369
477 Ga0501031_0174585
478 Ga0501032_0480926
479 Ga0501033_0295341
480 Ga0501034_0006108
481 Ga0501034_0511565
482 Ga0501036_0065944
483 Ga0501037_0033868
484 Ga0501037_0314001
485 Ga0501038_0401484
486 Ga0501038_0523090
487 Ga0501039_0052201
488 Ga0501040_0059532
489 Ga0501041_0538892
490 Ga0501042_0033078
491 Ga0501043_0232499
492 Ga0501043_0248946
493 Ga0501046_0195320
494 Ga0501047_0133313
495 Ga0501067_0209725
496 Ga0501071_0035235
497 Ga0501072_0235178
498 Ga0501075_0054030
499 Ga0501076_0119551
500 Ga0501077_0386142
501 Ga0501079_0026925
502 Ga0501081_0151486
503 Ga0501035_0018048
504 Ga0501035_0291416
505 Ga0501044_0006190
506 Ga0501044_0140530
507 Ga0501045_0011812
508 Ga0501045_0628230
509 nmdc:mga0qj67_68599_c1
510 nmdc:mga08y16_519297_c1
511 nmdc:mga0n895_20064_c1
512 nmdc:mga0rr50_28881_c1
513 nmdc:mga08x19_28165_c1
514 nmdc:mga0a205_42822_c1
515 Ga0500646_0077961
516 Ga0500568_0008601
517 Ga0500616_0000145
518 Ga0501084_0100885
519 Ga0501082_0040877
520 Ga0530510_0051991
521 2501943146
522 2676486924
523 2856859698
524 2857738952
525 2974298285
526 2974325485
527 649810188
528 8002776858

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04073

tRNA_edit

Aminoacyl-tRNA editing domain

61

186

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wdv-assembly2.cif.gz_B crystal structure of hypothetical protein ape2540 0.9056 41 181
2j3m-assembly1.cif.gz_A prolyl-trna synthetase from enterococcus faecalis complexed with atp, manganese and prolinol 0.884 52 161
2cx5-assembly3.cif.gz_C crystal structure of a putative trans-editing enzyme for prolyl trna synthetase 0.8657 20 177
1dbx-assembly2.cif.gz_B crystal structure of cysteinyl-trna(pro) deacylase from h. influenzae (hi1434) 0.8605 20 182
3ri0-assembly1.cif.gz_A epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins 0.8603 36 177
ID Description Score Start End Superfamily
1wdvB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.9074 41 181 3.90.960.10
af_P64483_2_166_3.90.960.10 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.8562 23 182 3.90.960.10
1dbxB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.8556 20 182 3.90.960.10
af_Q4D973_68_232_3.90.960.10 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.8508 41 182 3.90.960.10
1dbxB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.8454 20 182 3.90.960.10
ID Description Score Start End GO Terms
AF-A0A4R6JXL2-F1-model_v4 Prolyl-tRNA editing enzyme YbaK/EbsC (Cys-tRNA(Pro) deacylase) 0.9933 1 183 GO:0002161
AF-A0A4Q7W8F0-F1-model_v4 deleted 0.9929 1 183
AF-A0A0A0J107-F1-model_v4 deleted 0.9926 42 181
AF-A0A524BIQ9-F1-model_v4 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein 0.9909 82 183 GO:0002161
AF-A0A2G1XJS2-F1-model_v4 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein 0.9905 7 181 GO:0002161

Map