F372758

General Info

Members Datasets Scaffolds Average Seq Length
264 224 238 267

Family's Representative Sequence

Representative Sequence 3300037471|Ga0395905_0135821|Ga0395905_0135821_279_1139
Length 286
Sequence MNPPLAAVSTAAAVDGPLRDPGLRGRLTGAVIALVLLWPLLQLADFHPGRLFEAGNLQVMGNFLAGFLPPAASPEFLGLLLRATLETLALATAGIAMALVIAVPLGFAASRALSVSRLGPGPRPWRGWALRRTLRTLMLLLRALPEVVWALVFVRVLGLGPAAAVLALAITYGGMLAKVYAEILESADARPARALLEAGSGRLAALAYGLLPVAASELVSYTVYRWECAVRASVVMGFVGAGGLGQLMDQSMKMLNGGEASSILLTFLLLVLLADAISLGLRRLIA

Samples

Sample ID Description Type Environment
1 2511231024 Pseudomonas sp. GM84 Isolate Nodule
2 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
3 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
4 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
5 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
6 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
7 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
8 2713897148 Pseudomonas fluorescens SF39a Isolate Rhizosphere
9 2806310737 Pseudomonas mosselii BS011 Isolate Unclassified
10 2806310745 Pseudomonas mosselii PtA1 Isolate Unclassified
11 2842677519 Variovorax sp. R-72495 Isolate Unclassified
12 2842733646 Variovorax sp. R-72446 Isolate Unclassified
13 2842747753 Variovorax sp. R-72060 Isolate Unclassified
14 2842832357 Pseudomonas sp. R-72164 Isolate Unclassified
15 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
16 2912963787 Pseudomonas sp. R32 Isolate Rhizosphere
17 2919155634 Pseudomonas fulva 1992 Isolate Unclassified
18 2919385768 Pseudomonas sp. 2957 Isolate Unclassified
19 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
20 2939651529 Pseudomonas sp. 2835 Isolate Rhizosphere
21 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
22 3007861166 Pseudomonas hamedanensis SWRI65 Isolate Rhizosphere
23 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
24 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
25 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
26 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
27 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
28 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
29 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
30 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
31 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
32 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
33 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
34 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
35 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
36 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
37 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
38 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
39 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
40 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
41 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
42 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
43 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
44 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
45 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
46 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
47 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
48 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
49 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
50 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
51 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
52 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
53 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
54 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
55 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
56 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
57 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
58 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
59 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
60 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
61 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
62 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
63 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
64 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
65 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
66 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
67 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
68 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
69 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
70 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
71 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
72 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
73 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
74 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
75 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
76 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
77 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
78 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
79 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
80 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
81 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
82 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
83 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
84 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
85 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
86 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
87 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
88 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
89 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
90 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
91 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
92 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
93 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
94 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
95 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
96 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
97 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
98 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
127 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
128 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
129 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
131 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
132 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
133 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
134 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
135 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
136 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
137 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
138 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
139 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
140 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
141 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
142 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
143 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
144 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
145 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
146 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
147 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
148 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
149 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
150 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
151 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
152 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
153 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
154 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
155 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
156 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
157 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
158 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
159 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
160 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
161 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
162 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
163 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
164 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
165 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
166 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
167 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
168 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
169 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
170 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
171 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
172 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
173 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
174 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
175 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
176 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
177 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
178 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
179 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
180 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
181 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
182 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
183 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
184 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
185 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
186 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
187 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
188 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
189 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
190 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
191 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
192 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
193 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
194 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
195 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
196 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
197 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
198 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
199 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
200 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
201 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
202 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
203 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
204 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
205 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
206 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
207 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
208 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
209 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
210 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
211 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
212 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
213 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
214 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
215 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
216 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
217 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
218 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
219 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
220 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
221 8056115690 Pseudomonas muyukensis COW39 Isolate Rhizosphere
222 8056120720 Pseudomonas maumuensis COW77 Isolate Rhizosphere
223 8056137416 Pseudomonas fakonensis COW40 Isolate Rhizosphere
224 8056166840 Pseudomonas triticicola SWRI88 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.15
Metatranscriptomes 0
Isolates 9.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.77
Nodule 1.14
Rhizoplane 1.52
Rhizosphere 72.73
Stem 0
Stem Tuber 0
Unclassified 9.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10000973 3300002067 Bacteria 10246
2 JGI25152J39213_1001054 3300002773 Bacteria 13092
3 JGI25150J39212_1016076 3300002774 Bacteria 1234
4 JGI25151J46595_10034362 3300003187 Bacteria 1940
5 JGI25153J46596_10000358 3300003215 Bacteria 31518
6 rootH1_10005353 3300003316 Bacteria 2305
7 rootH1_10055817 3300003316 Bacteria 2682
8 rootL2_10005060 3300003322 Bacteria 3510
9 Ga0055526_1000301 3300003771 Bacteria 41220
10 Ga0055524_1000841 3300003775 Bacteria 20133
11 Ga0055536_1000013 3300003781 Bacteria 240693
12 Ga0055534_1000088 3300003784 Bacteria 72004
13 Ga0055528_1011296 3300003790 Bacteria 3560
14 Ga0055530_10000792 3300003791 Bacteria 26304
15 Ga0055530_10001384 3300003791 Bacteria 17962
16 Ga0055530_10025226 3300003791 Bacteria 1664
17 Ga0055540_1000148 3300003792 Bacteria 70105
18 Ga0055531_10021785 3300003794 Bacteria 2471
19 Ga0065714_10078593 3300005288 Bacteria 2586
20 Ga0070658_10025132 3300005327 Bacteria 4775
21 Ga0070658_10227535 3300005327 Bacteria 1578
22 Ga0068869_100049359 3300005334 Bacteria 3046
23 Ga0068869_100461138 3300005334 Bacteria 1055
24 Ga0070660_100002061 3300005339 Bacteria 13871
25 Ga0070689_100525689 3300005340 Bacteria 1016
26 Ga0070661_100276757 3300005344 Bacteria 1301
27 Ga0070669_100071731 3300005353 Bacteria 2563
28 Ga0070675_100179701 3300005354 Bacteria 1829
29 Ga0070659_100343322 3300005366 Bacteria 1251
30 Ga0070667_100019243 3300005367 Bacteria 5664
31 Ga0070714_100470110 3300005435 Bacteria 1196
32 Ga0070700_100357718 3300005441 Bacteria 1084
33 Ga0070708_100299547 3300005445 Bacteria 1514
34 Ga0070662_100005209 3300005457 Bacteria 8297
35 Ga0070681_10004609 3300005458 Bacteria 13164
36 Ga0068867_100000065 3300005459 Bacteria 63911
37 Ga0070706_100004441 3300005467 Bacteria 13542
38 Ga0070706_100039765 3300005467 Bacteria 4341
39 Ga0070698_100413259 3300005471 Bacteria 1283
40 Ga0070699_100226002 3300005518 Bacteria 1669
41 Ga0070679_100461833 3300005530 Bacteria 1214
42 Ga0070697_100135876 3300005536 Bacteria 2065
43 Ga0070697_100412318 3300005536 Bacteria 1173
44 Ga0070672_100001888 3300005543 Bacteria 13124
45 Ga0068855_100012871 3300005563 Bacteria 10094
46 Ga0068855_100085509 3300005563 Bacteria 3649
47 Ga0068855_100222883 3300005563 Bacteria 2114
48 Ga0068852_100043028 3300005616 Bacteria 3828
49 Ga0068864_100037808 3300005618 Bacteria 4121
50 Ga0068861_100221539 3300005719 Bacteria 1599
51 Ga0068860_100314918 3300005843 Bacteria 1535
52 Ga0081539_10037260 3300005985 Bacteria 2899
53 Ga0075362_10023856 3300006177 Bacteria 2590
54 Ga0075370_10001305 3300006353 Bacteria 10665
55 Ga0075430_100009216 3300006846 Bacteria 8343
56 Ga0075429_100002782 3300006880 Bacteria 14788
57 Ga0079104_1000595 3300006946 Bacteria 36027
58 Ga0105244_10058732 3300009036 Bacteria 1940
59 Ga0105250_10000155 3300009092 Bacteria 59663
60 Ga0105240_10001133 3300009093 Bacteria 46680
61 Ga0105243_10010238 3300009148 Bacteria 7126
62 Ga0105242_10272436 3300009176 Bacteria 1534
63 Ga0105248_10155566 3300009177 Bacteria 2580
64 Ga0105237_10027936 3300009545 Bacteria 5749
65 Ga0105237_10031326 3300009545 Bacteria 5393
66 Ga0105249_10543414 3300009553 Bacteria 1212
67 Ga0105239_10001495 3300010375 Bacteria 31078
68 Ga0157373_10039689 3300013100 Bacteria 3370
69 Ga0157370_10012753 3300013104 Bacteria 8693
70 Ga0157369_10000726 3300013105 Bacteria 42440
71 Ga0157369_10045641 3300013105 Bacteria 4764
72 Ga0157369_10105343 3300013105 Bacteria 3003
73 Ga0157374_10000032 3300013296 Bacteria 202485
74 Ga0157372_10003169 3300013307 Bacteria 17739
75 Ga0157372_10004578 3300013307 Bacteria 14708
76 Ga0157372_10075658 3300013307 Bacteria 3799
77 Ga0157375_10198770 3300013308 Bacteria 2160
78 Ga0182008_10000070 3300014497 Bacteria 81986
79 Ga0157377_10000213 3300014745 Bacteria 31698
80 Ga0157379_10026033 3300014968 Bacteria 5203
81 Ga0163161_10053904 3300017792 Bacteria 2917
82 Ga0163161_10097380 3300017792 Bacteria 2185
83 Ga0207425_1000175 3300025245 Bacteria 52768
84 Ga0209759_1001296 3300025256 Bacteria 14817
85 Ga0209129_1000200 3300025258 Bacteria 77042
86 Ga0209565_1017339 3300025263 Bacteria 1580
87 Ga0209673_1003329 3300025273 Bacteria 9612
88 Ga0209673_1036049 3300025273 Bacteria 1473
89 Ga0209025_1000115 3300025294 Bacteria 218871
90 Ga0209564_1000046 3300025295 Bacteria 373787
91 Ga0209758_1000285 3300025297 Bacteria 99959
92 Ga0209050_1001069 3300025298 Bacteria 33615
93 Ga0209050_1001817 3300025298 Bacteria 20812
94 Ga0209256_1000024 3300025299 Bacteria 448909
95 Ga0209051_1000155 3300025303 Bacteria 129560
96 Ga0209051_1043910 3300025303 Bacteria 1563
97 Ga0209257_1000236 3300025304 Bacteria 129543
98 Ga0207713_1000924 3300025735 Bacteria 26352
99 Ga0207647_10001142 3300025904 Bacteria 20402
100 Ga0207705_10183916 3300025909 Bacteria 1578
101 Ga0207684_10046941 3300025910 Bacteria 3664
102 Ga0207707_10028584 3300025912 Bacteria 4873
103 Ga0207695_10016852 3300025913 Bacteria 8529
104 Ga0207671_10144919 3300025914 Bacteria 1832
105 Ga0207657_10000330 3300025919 Bacteria 50190
106 Ga0207657_10030231 3300025919 Bacteria 4919
107 Ga0207646_10006228 3300025922 Bacteria 12398
108 Ga0207646_10413662 3300025922 Bacteria 1218
109 Ga0207681_10062740 3300025923 Bacteria 2560
110 Ga0207650_10050413 3300025925 Bacteria 3078
111 Ga0207650_10196238 3300025925 Bacteria 1615
112 Ga0207659_10097570 3300025926 Bacteria 2208
113 Ga0207690_10054670 3300025932 Bacteria 2685
114 Ga0207690_10214948 3300025932 Bacteria 1468
115 Ga0207706_10015568 3300025933 Bacteria 6871
116 Ga0207686_10085062 3300025934 Bacteria 2074
117 Ga0207709_10004372 3300025935 Bacteria 8177
118 Ga0207691_10004832 3300025940 Bacteria 13036
119 Ga0207711_10128550 3300025941 Bacteria 2269
120 Ga0207667_10002763 3300025949 Bacteria 21703
121 Ga0207667_10047112 3300025949 Bacteria 4564
122 Ga0207667_10288471 3300025949 Bacteria 1677
123 Ga0207708_10401342 3300026075 Bacteria 1134
124 Ga0207648_10000194 3300026089 Bacteria 64010
125 Ga0207676_10013843 3300026095 Bacteria 5791
126 Ga0207675_100021225 3300026118 Bacteria 6049
127 Ga0207675_100119090 3300026118 Bacteria 2497
128 Ga0207698_10025552 3300026142 Bacteria 4163
129 Ga0207698_10437633 3300026142 Bacteria 1259
130 Ga0209281_1000322 3300027111 Bacteria 84374
131 Ga0209371_1000422 3300027312 Bacteria 43590
132 Ga0207428_10250128 3300027907 Bacteria 1322
133 Ga0268264_10094592 3300028381 Bacteria 2583
134 Ga0307517_10117708 3300028786 Bacteria 1982
135 Ga0307515_10050515 3300028794 Bacteria 6224
136 Ga0265324_10021093 3300029957 Bacteria 2338
137 Ga0268256_1000348 3300030500 Bacteria 44758
138 Ga0316177_1045000 3300030731 Bacteria 1895
139 Ga0316176_1109463 3300030732 Bacteria 1513
140 Ga0314311_1231906 3300030733 Bacteria 4559
141 Ga0316178_1142909 3300030735 Bacteria 3007
142 Ga0265332_10007722 3300031238 Bacteria 4860
143 Ga0265327_10000487 3300031251 Bacteria 69944
144 Ga0307516_10001457 3300031730 Bacteria 32730
145 Ga0307405_10021731 3300031731 Bacteria 3612
146 Ga0307405_10086417 3300031731 Bacteria 2064
147 Ga0307412_10034249 3300031911 Bacteria 3235
148 Ga0307412_10125980 3300031911 Bacteria 1852
149 Ga0307412_10296423 3300031911 Bacteria 1276
150 Ga0307416_100179870 3300032002 Bacteria 1981
151 Ga0307411_10020255 3300032005 Bacteria 3863
152 Ga0307411_10114533 3300032005 Bacteria 1937
153 Ga0307507_10014258 3300033179 Bacteria 9502
154 Ga0373939_0080426 3300035114 Bacteria 1081
155 Ga0395900_0326283 3300037418 Bacteria 1514
156 Ga0395905_0001475 3300037471 Bacteria 28210
157 Ga0395905_0135821 3300037471 Bacteria 2313
158 Ga0439436_0000207 3300041404 Bacteria 14169
159 Ga0439439_0015132 3300041406 Bacteria 1881
160 Ga0439447_018206 3300041407 Bacteria 1899
161 Ga0439465_0000230 3300041413 Bacteria 15149
162 Ga0439433_0001947 3300041999 Bacteria 4323
163 Ga0439442_015419 3300042002 Bacteria 1574
164 Ga0439448_0003426 3300042005 Bacteria 4393
165 Ga0439432_015292 3300042006 Bacteria 2591
166 Ga0439449_0000139 3300042007 Bacteria 24604
167 Ga0439452_001215 3300042010 Bacteria 11026
168 Ga0439455_0008157 3300042012 Bacteria 2239
169 Ga0439456_000138 3300042013 Bacteria 22270
170 Ga0439457_002922 3300042014 Bacteria 4761
171 Ga0439462_0004396 3300042015 Bacteria 3436
172 Ga0450898_006250 3300042134 Bacteria 1823
173 Ga0439446_0034400 3300042156 Bacteria 1474
174 Ga0439434_0003550 3300042435 Bacteria 4552
175 Ga0466969_0000075 3300044656 Bacteria 52007
176 Ga0466972_0001606 3300044658 Bacteria 11042
177 Ga0466961_0008106 3300044693 Bacteria 6690
178 Ga0466961_0114048 3300044693 Bacteria 1699
179 Ga0466964_0180299 3300044706 Bacteria 1001
180 Ga0466960_0074707 3300044901 Bacteria 1694
181 Ga0466959_0272705 3300045049 Bacteria 1162
182 Ga0466959_0345959 3300045049 Bacteria 1014
183 Ga0495627_001769 3300046453 Bacteria 11609
184 Ga0495591_000263 3300046458 Bacteria 49869
185 Ga0495638_0137525 3300046460 Bacteria 1429
186 Ga0495580_0219382 3300046472 Bacteria 1307
187 Ga0495605_0000642 3300046474 Bacteria 26793
188 Ga0495639_0018381 3300046475 Bacteria 3042
189 Ga0495585_0004028 3300046492 Bacteria 9675
190 Ga0495607_0007174 3300046501 Bacteria 7744
191 Ga0495607_0030262 3300046501 Bacteria 3325
192 Ga0495583_0001082 3300046506 Bacteria 30273
193 Ga0495616_0000364 3300046513 Bacteria 35589
194 Ga0495616_0000485 3300046513 Bacteria 30262
195 Ga0495620_0024159 3300046515 Bacteria 2894
196 Ga0495632_0010196 3300046519 Bacteria 5583
197 Ga0495637_0019589 3300046520 Bacteria 3126
198 Ga0495643_0000844 3300046522 Bacteria 33256
199 Ga0495648_0006296 3300046524 Bacteria 9707
200 Ga0495654_0000182 3300046530 Bacteria 61568
201 Ga0495609_0016062 3300046538 Bacteria 3493
202 Ga0495668_0018874 3300046616 Bacteria 3984
203 Ga0495625_0000245 3300046660 Bacteria 85443
204 Ga0495625_0017344 3300046660 Bacteria 5639
205 Ga0495671_0002476 3300046692 Bacteria 11644
206 Ga0495649_0000664 3300046694 Bacteria 28100
207 Ga0495679_001583 3300047446 Bacteria 12832
208 Ga0495679_008671 3300047446 Bacteria 4116
209 Ga0495673_0000609 3300047469 Bacteria 35569
210 Ga0495626_0001854 3300048091 Bacteria 15864
211 Ga0495626_0002426 3300048091 Bacteria 12944
212 Ga0495626_0068273 3300048091 Bacteria 1603
213 Ga0496102_0043118 3300048905 Bacteria 4090
214 Ga0496102_0166566 3300048905 Bacteria 2074
215 Ga0496112_0389534 3300048915 Bacteria 1334
216 Ga0496114_0018718 3300048917 Bacteria 5604
217 Ga0496116_0000503 3300048919 Bacteria 53433
218 Ga0496119_0000100 3300048922 Bacteria 125646
219 Ga0496120_0004864 3300048923 Bacteria 10978
220 Ga0496122_0000204 3300048925 Bacteria 132123
221 Ga0496123_0000368 3300048926 Bacteria 84471
222 Ga0495678_002705 3300049459 Bacteria 11693
223 Ga0501252_010681 3300049682 Bacteria 1090
224 Ga0501225_0001220 3300049705 Bacteria 8009
225 Ga0501262_000573 3300049759 Bacteria 4385
226 nmdc:mga03683_48250_c1 3300050489 Bacteria 1769
227 nmdc:mga0k408_20926_c1 3300050493 Bacteria 3671
228 nmdc:mga07m45_730_c1 3300050496 Bacteria 14016
229 nmdc:mga05p37_195320_c1 3300050507 Bacteria 2454
230 nmdc:mga09592_2502_c1 3300050508 Bacteria 14858
231 nmdc:mga0qj67_24573_c1 3300050509 Bacteria 4646
232 nmdc:mga0n895_268048_c1 3300050512 Bacteria 1732
233 Ga0500635_0000160 3300053080 Bacteria 36139
234 Ga0500578_0000115 3300053086 Bacteria 95966
235 Ga0500559_0002138 3300053136 Bacteria 10512
236 Ga0500573_0175339 3300053140 Bacteria 1156
237 Ga0500619_000283 3300053154 Bacteria 10316
238 Ga0500622_0108052 3300053156 Bacteria 1362

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037418 Ga0395900_0326283 Ga0395900_0326283_807_1499 230
2 3300048905 Ga0496102_0166566 Ga0496102_0166566_133_960 233
3 3300048915 Ga0496112_0389534 Ga0496112_0389534_403_1230 234
4 3300050507 nmdc:mga05p37_195320_c1 nmdc:mga05p37_195320_c1_1497_2306 236
5 3300025298 Ga0209050_1001817 Ga0209050_100181720 238
6 3300003791 Ga0055530_10025226 Ga0055530_100252262 239
7 3300025303 Ga0209051_1043910 Ga0209051_10439102 239
8 3300028794 Ga0307515_10050515 Ga0307515_100505152 239
9 3300006846 Ga0075430_100009216 Ga0075430_1000092168 240
10 3300006880 Ga0075429_100002782 Ga0075429_1000027828 240
11 3300049759 Ga0501262_000573 Ga0501262_000573_154_963 240
12 3300050508 nmdc:mga09592_2502_c1 nmdc:mga09592_2502_c1_6565_7398 240
13 3300050509 nmdc:mga0qj67_24573_c1 nmdc:mga0qj67_24573_c1_2969_3802 240
14 3300049682 Ga0501252_010681 Ga0501252_010681_19_792 241
15 3300041404 Ga0439436_0000207 Ga0439436_0000207_9610_10419 242
16 3300041406 Ga0439439_0015132 Ga0439439_0015132_447_1256 242
17 3300041407 Ga0439447_018206 Ga0439447_018206_790_1599 242
18 3300041413 Ga0439465_0000230 Ga0439465_0000230_3829_4638 242
19 3300041999 Ga0439433_0001947 Ga0439433_0001947_63_872 242
20 3300042002 Ga0439442_015419 Ga0439442_015419_613_1422 242
21 3300042006 Ga0439432_015292 Ga0439432_015292_91_900 242
22 3300042007 Ga0439449_0000139 Ga0439449_0000139_8939_9748 242
23 3300042010 Ga0439452_001215 Ga0439452_001215_6082_6891 242
24 3300042014 Ga0439457_002922 Ga0439457_002922_3118_3927 242
25 3300042015 Ga0439462_0004396 Ga0439462_0004396_1634_2443 242
26 3300042156 Ga0439446_0034400 Ga0439446_0034400_552_1361 242
27 3300042435 Ga0439434_0003550 Ga0439434_0003550_2486_3295 242
28 3300003316 rootH1_10055817 rootH1_100558173 243
29 3300046506 Ga0495583_0001082 Ga0495583_0001082_9512_10339 245
30 3300046513 Ga0495616_0000485 Ga0495616_0000485_19952_20779 245
31 3300046522 Ga0495643_0000844 Ga0495643_0000844_9962_10789 245
32 3300050493 nmdc:mga0k408_20926_c1 nmdc:mga0k408_20926_c1_641_1450 245
33 3300005334 Ga0068869_100461138 Ga0068869_1004611381 246
34 3300030731 Ga0316177_1045000 Ga0316177_10450002 246
35 3300030732 Ga0316176_1109463 Ga0316176_11094632 246
36 3300031911 Ga0307412_10034249 Ga0307412_100342494 246
37 3300003784 Ga0055534_1000088 Ga0055534_100008862 247
38 3300003790 Ga0055528_1011296 Ga0055528_10112963 247
39 3300005458 Ga0070681_10004609 Ga0070681_100046092 247
40 3300005467 Ga0070706_100004441 Ga0070706_1000044412 247
41 3300005530 Ga0070679_100461833 Ga0070679_1004618332 247
42 3300005536 Ga0070697_100135876 Ga0070697_1001358762 247
43 3300025912 Ga0207707_10028584 Ga0207707_100285842 247
44 3300028786 Ga0307517_10117708 Ga0307517_101177082 247
45 3300030733 Ga0314311_1231906 Ga0314311_12319063 247
46 3300030735 Ga0316178_1142909 Ga0316178_11429093 247
47 3300046472 Ga0495580_0219382 Ga0495580_0219382_391_1230 247
48 3300050512 nmdc:mga0n895_268048_c1 nmdc:mga0n895_268048_c1_157_996 247
49 3300053086 Ga0500578_0000115 Ga0500578_0000115_65792_66631 248
50 3300006177 Ga0075362_10023856 Ga0075362_100238562 249
51 3300006353 Ga0075370_10001305 Ga0075370_100013058 249
52 3300031911 Ga0307412_10296423 Ga0307412_102964232 249
53 3300032005 Ga0307411_10020255 Ga0307411_100202553 249
54 3300042134 Ga0450898_006250 Ga0450898_006250_866_1708 249
55 3300050496 nmdc:mga07m45_730_c1 nmdc:mga07m45_730_c1_2047_2886 249
56 3300005334 Ga0068869_100049359 Ga0068869_1000493592 250
57 3300009176 Ga0105242_10272436 Ga0105242_102724362 250
58 3300009553 Ga0105249_10543414 Ga0105249_105434141 250
59 3300025934 Ga0207686_10085062 Ga0207686_100850622 250
60 3300026118 Ga0207675_100021225 Ga0207675_1000212253 250
61 3300027907 Ga0207428_10250128 Ga0207428_102501282 250
62 3300031731 Ga0307405_10021731 Ga0307405_100217312 250
63 3300049705 Ga0501225_0001220 Ga0501225_0001220_6415_7266 250
64 3300031731 Ga0307405_10086417 Ga0307405_100864171 251
65 3300031251 Ga0265327_10000487 Ga0265327_1000048738 252
66 3300032002 Ga0307416_100179870 Ga0307416_1001798702 253
67 3300005288 Ga0065714_10078593 Ga0065714_100785933 254
68 3300048091 Ga0495626_0001854 Ga0495626_0001854_7940_8767 254
69 3300048091 Ga0495626_0068273 Ga0495626_0068273_191_1018 254
70 3300048925 Ga0496122_0000204 Ga0496122_0000204_52043_52873 254
71 3300048926 Ga0496123_0000368 Ga0496123_0000368_42018_42848 254
72 3300046616 Ga0495668_0018874 Ga0495668_0018874_413_1237 255
73 3300025273 Ga0209673_1003329 Ga0209673_100332910 256
74 3300046660 Ga0495625_0000245 Ga0495625_0000245_8798_9649 256
75 3300046501 Ga0495607_0007174 Ga0495607_0007174_878_1702 257
76 3300047446 Ga0495679_008671 Ga0495679_008671_861_1685 257
77 3300046458 Ga0495591_000263 Ga0495591_000263_21078_21905 258
78 3300025922 Ga0207646_10413662 Ga0207646_104136621 259
79 3300046453 Ga0495627_001769 Ga0495627_001769_8665_9492 259
80 3300046474 Ga0495605_0000642 Ga0495605_0000642_2102_2929 259
81 3300046492 Ga0495585_0004028 Ga0495585_0004028_7736_8563 259
82 3300046501 Ga0495607_0030262 Ga0495607_0030262_333_1160 259
83 3300046513 Ga0495616_0000364 Ga0495616_0000364_26307_27134 259
84 3300046515 Ga0495620_0024159 Ga0495620_0024159_896_1723 259
85 3300046519 Ga0495632_0010196 Ga0495632_0010196_2058_2885 259
86 3300046520 Ga0495637_0019589 Ga0495637_0019589_1140_1967 259
87 3300046524 Ga0495648_0006296 Ga0495648_0006296_2436_3263 259
88 3300046530 Ga0495654_0000182 Ga0495654_0000182_26203_27030 259
89 3300046538 Ga0495609_0016062 Ga0495609_0016062_1371_2198 259
90 3300046660 Ga0495625_0017344 Ga0495625_0017344_2155_2982 259
91 3300046692 Ga0495671_0002476 Ga0495671_0002476_8671_9498 259
92 3300046694 Ga0495649_0000664 Ga0495649_0000664_25109_25936 259
93 3300047446 Ga0495679_001583 Ga0495679_001583_9874_10701 259
94 3300047469 Ga0495673_0000609 Ga0495673_0000609_23754_24581 259
95 3300048091 Ga0495626_0002426 Ga0495626_0002426_9949_10776 259
96 3300049459 Ga0495678_002705 Ga0495678_002705_8635_9462 259
97 3300005536 Ga0070697_100412318 Ga0070697_1004123182 261
98 3300025922 Ga0207646_10006228 Ga0207646_100062286 261
99 3300005344 Ga0070661_100276757 Ga0070661_1002767572 262
100 3300005435 Ga0070714_100470110 Ga0070714_1004701102 262
101 3300005518 Ga0070699_100226002 Ga0070699_1002260022 262
102 3300005563 Ga0068855_100085509 Ga0068855_1000855092 263
103 3300009545 Ga0105237_10031326 Ga0105237_100313264 263
104 3300013105 Ga0157369_10045641 Ga0157369_100456415 263
105 3300025914 Ga0207671_10144919 Ga0207671_101449192 263
106 3300025932 Ga0207690_10214948 Ga0207690_102149482 263
107 3300025949 Ga0207667_10047112 Ga0207667_100471122 263
108 3300026142 Ga0207698_10437633 Ga0207698_104376332 263
109 3300046460 Ga0495638_0137525 Ga0495638_0137525_129_956 263
110 3300048905 Ga0496102_0043118 Ga0496102_0043118_1473_2294 263
111 3300048919 Ga0496116_0000503 Ga0496116_0000503_33140_33961 263
112 3300003187 JGI25151J46595_10034362 JGI25151J46595_100343622 264
113 3300025294 Ga0209025_1000115 Ga0209025_100011556 264
114 3300044901 Ga0466960_0074707 Ga0466960_0074707_666_1511 265
115 3300045049 Ga0466959_0345959 Ga0466959_0345959_155_1000 265
116 3300053080 Ga0500635_0000160 Ga0500635_0000160_627_1469 265
117 iso_pu_bacteria 2842747753 2842748799 265
118 iso_pu_bacteria 2885192300 2885197696 265
119 3300033179 Ga0307507_10014258 Ga0307507_100142582 267
120 3300005340 Ga0070689_100525689 Ga0070689_1005256892 268
121 3300005441 Ga0070700_100357718 Ga0070700_1003577182 268
122 3300013308 Ga0157375_10198770 Ga0157375_101987703 268
123 3300014968 Ga0157379_10026033 Ga0157379_100260334 268
124 3300026075 Ga0207708_10401342 Ga0207708_104013422 268
125 3300003316 rootH1_10005353 rootH1_100053533 269
126 3300003322 rootL2_10005060 rootL2_100050602 269
127 3300003775 Ga0055524_1000841 Ga0055524_100084124 269
128 3300003791 Ga0055530_10000792 Ga0055530_1000079223 269
129 3300003791 Ga0055530_10001384 Ga0055530_1000138411 269
130 3300003792 Ga0055540_1000148 Ga0055540_100014813 269
131 3300003794 Ga0055531_10021785 Ga0055531_100217852 269
132 3300006946 Ga0079104_1000595 Ga0079104_100059520 269
133 3300025263 Ga0209565_1017339 Ga0209565_10173392 269
134 3300025298 Ga0209050_1001069 Ga0209050_10010695 269
135 3300025299 Ga0209256_1000024 Ga0209256_1000024379 269
136 3300025303 Ga0209051_1000155 Ga0209051_100015567 269
137 3300025304 Ga0209257_1000236 Ga0209257_100023667 269
138 3300027111 Ga0209281_1000322 Ga0209281_100032265 269
139 iso_pu_bacteria 2511231024 2511375023 270
140 iso_pu_bacteria 2588253510 2588293562 270
141 iso_pu_bacteria 2643221592 2643968922 270
142 iso_pu_bacteria 2643221625 2644144054 270
143 iso_pu_bacteria 2643221648 2644273173 270
144 iso_pu_bacteria 2713897148 2715753771 270
145 iso_pu_bacteria 2806310737 2807410072 270
146 iso_pu_bacteria 2806310745 2807458419 270
147 iso_pu_bacteria 2842832357 2842837813 270
148 iso_pu_bacteria 2912963787 2912964649 270
149 iso_pu_bacteria 2919155634 2919157841 270
150 iso_pu_bacteria 2919385768 2919387265 270
151 iso_pu_bacteria 2939651529 2939652156 270
152 iso_pu_bacteria 3007861166 3007862262 270
153 iso_pu_bacteria 8056115690 8056120464 270
154 iso_pu_bacteria 8056120720 8056125073 270
155 iso_pu_bacteria 8056137416 8056142086 270
156 iso_pu_bacteria 8056166840 8056168023 270
157 3300005471 Ga0070698_100413259 Ga0070698_1004132591 271
158 3300031911 Ga0307412_10125980 Ga0307412_101259802 271
159 3300032005 Ga0307411_10114533 Ga0307411_101145332 271
160 iso_pu_bacteria 2643221628 2644162340 271
161 iso_pu_bacteria 2842677519 2842680837 271
162 iso_pu_bacteria 2842733646 2842738172 271
163 iso_pu_bacteria 2919462493 2919462891 271
164 iso_pu_bacteria 2945945610 2945949307 271
165 3300002773 JGI25152J39213_1001054 JGI25152J39213_10010542 272
166 3300002774 JGI25150J39212_1016076 JGI25150J39212_10160762 272
167 3300003215 JGI25153J46596_10000358 JGI25153J46596_1000035810 272
168 3300003771 Ga0055526_1000301 Ga0055526_100030112 272
169 3300025245 Ga0207425_1000175 Ga0207425_10001758 272
170 3300025258 Ga0209129_1000200 Ga0209129_100020045 272
171 3300025273 Ga0209673_1036049 Ga0209673_10360492 272
172 3300025295 Ga0209564_1000046 Ga0209564_100004665 272
173 3300025297 Ga0209758_1000285 Ga0209758_100028536 272
174 3300053154 Ga0500619_000283 Ga0500619_000283_6451_7296 272
175 3300053156 Ga0500622_0108052 Ga0500622_0108052_316_1155 272
176 3300002067 JGI24735J21928_10000973 JGI24735J21928_100009735 273
177 3300003781 Ga0055536_1000013 Ga0055536_1000013159 273
178 3300005327 Ga0070658_10025132 Ga0070658_100251322 273
179 3300005327 Ga0070658_10227535 Ga0070658_102275352 273
180 3300005339 Ga0070660_100002061 Ga0070660_1000020617 273
181 3300005353 Ga0070669_100071731 Ga0070669_1000717312 273
182 3300005354 Ga0070675_100179701 Ga0070675_1001797012 273
183 3300005366 Ga0070659_100343322 Ga0070659_1003433221 273
184 3300005367 Ga0070667_100019243 Ga0070667_1000192433 273
185 3300005445 Ga0070708_100299547 Ga0070708_1002995472 273
186 3300005457 Ga0070662_100005209 Ga0070662_1000052093 273
187 3300005459 Ga0068867_100000065 Ga0068867_10000006555 273
188 3300005467 Ga0070706_100039765 Ga0070706_1000397654 273
189 3300005543 Ga0070672_100001888 Ga0070672_1000018886 273
190 3300005563 Ga0068855_100012871 Ga0068855_1000128718 273
191 3300005563 Ga0068855_100222883 Ga0068855_1002228832 273
192 3300005616 Ga0068852_100043028 Ga0068852_1000430285 273
193 3300005618 Ga0068864_100037808 Ga0068864_1000378084 273
194 3300005719 Ga0068861_100221539 Ga0068861_1002215392 273
195 3300005843 Ga0068860_100314918 Ga0068860_1003149182 273
196 3300005985 Ga0081539_10037260 Ga0081539_100372602 273
197 3300009036 Ga0105244_10058732 Ga0105244_100587323 273
198 3300009092 Ga0105250_10000155 Ga0105250_1000015522 273
199 3300009093 Ga0105240_10001133 Ga0105240_1000113328 273
200 3300009148 Ga0105243_10010238 Ga0105243_100102383 273
201 3300009177 Ga0105248_10155566 Ga0105248_101555663 273
202 3300009545 Ga0105237_10027936 Ga0105237_100279361 273
203 3300010375 Ga0105239_10001495 Ga0105239_1000149524 273
204 3300013100 Ga0157373_10039689 Ga0157373_100396893 273
205 3300013104 Ga0157370_10012753 Ga0157370_100127539 273
206 3300013105 Ga0157369_10000726 Ga0157369_1000072635 273
207 3300013105 Ga0157369_10105343 Ga0157369_101053432 273
208 3300013296 Ga0157374_10000032 Ga0157374_1000003240 273
209 3300013307 Ga0157372_10003169 Ga0157372_100031694 273
210 3300013307 Ga0157372_10004578 Ga0157372_1000457812 273
211 3300013307 Ga0157372_10075658 Ga0157372_100756584 273
212 3300014497 Ga0182008_10000070 Ga0182008_1000007034 273
213 3300014745 Ga0157377_10000213 Ga0157377_100002135 273
214 3300017792 Ga0163161_10053904 Ga0163161_100539043 273
215 3300017792 Ga0163161_10097380 Ga0163161_100973802 273
216 3300025256 Ga0209759_1001296 Ga0209759_10012965 273
217 3300025735 Ga0207713_1000924 Ga0207713_100092419 273
218 3300025904 Ga0207647_10001142 Ga0207647_100011428 273
219 3300025909 Ga0207705_10183916 Ga0207705_101839162 273
220 3300025910 Ga0207684_10046941 Ga0207684_100469413 273
221 3300025913 Ga0207695_10016852 Ga0207695_100168528 273
222 3300025919 Ga0207657_10000330 Ga0207657_1000033026 273
223 3300025919 Ga0207657_10030231 Ga0207657_100302313 273
224 3300025923 Ga0207681_10062740 Ga0207681_100627403 273
225 3300025925 Ga0207650_10050413 Ga0207650_100504133 273
226 3300025925 Ga0207650_10196238 Ga0207650_101962382 273
227 3300025926 Ga0207659_10097570 Ga0207659_100975702 273
228 3300025932 Ga0207690_10054670 Ga0207690_100546703 273
229 3300025933 Ga0207706_10015568 Ga0207706_100155687 273
230 3300025935 Ga0207709_10004372 Ga0207709_100043723 273
231 3300025940 Ga0207691_10004832 Ga0207691_1000483210 273
232 3300025941 Ga0207711_10128550 Ga0207711_101285502 273
233 3300025949 Ga0207667_10002763 Ga0207667_1000276324 273
234 3300025949 Ga0207667_10288471 Ga0207667_102884712 273
235 3300026089 Ga0207648_10000194 Ga0207648_100001945 273
236 3300026095 Ga0207676_10013843 Ga0207676_100138435 273
237 3300026118 Ga0207675_100119090 Ga0207675_1001190902 273
238 3300026142 Ga0207698_10025552 Ga0207698_100255525 273
239 3300027312 Ga0209371_1000422 Ga0209371_100042218 273
240 3300028381 Ga0268264_10094592 Ga0268264_100945924 273
241 3300029957 Ga0265324_10021093 Ga0265324_100210932 273
242 3300030500 Ga0268256_1000348 Ga0268256_100034819 273
243 3300031238 Ga0265332_10007722 Ga0265332_100077222 273
244 3300031730 Ga0307516_10001457 Ga0307516_1000145714 273
245 3300035114 Ga0373939_0080426 Ga0373939_0080426_77_922 273
246 3300037471 Ga0395905_0001475 Ga0395905_0001475_3779_4615 273
247 3300037471 Ga0395905_0135821 Ga0395905_0135821_279_1139 273
248 3300042005 Ga0439448_0003426 Ga0439448_0003426_2743_3564 273
249 3300042012 Ga0439455_0008157 Ga0439455_0008157_436_1257 273
250 3300042013 Ga0439456_000138 Ga0439456_000138_6694_7521 273
251 3300044656 Ga0466969_0000075 Ga0466969_0000075_32568_33392 273
252 3300044658 Ga0466972_0001606 Ga0466972_0001606_9104_9931 273
253 3300044693 Ga0466961_0008106 Ga0466961_0008106_3078_3902 273
254 3300044693 Ga0466961_0114048 Ga0466961_0114048_58_885 273
255 3300044706 Ga0466964_0180299 Ga0466964_0180299_103_930 273
256 3300045049 Ga0466959_0272705 Ga0466959_0272705_80_904 273
257 3300046475 Ga0495639_0018381 Ga0495639_0018381_819_1661 273
258 3300048917 Ga0496114_0018718 Ga0496114_0018718_818_1645 273
259 3300048922 Ga0496119_0000100 Ga0496119_0000100_120635_121462 273
260 3300048923 Ga0496120_0004864 Ga0496120_0004864_4546_5373 273
261 3300050489 nmdc:mga03683_48250_c1 nmdc:mga03683_48250_c1_295_1146 273
262 3300053136 Ga0500559_0002138 Ga0500559_0002138_3509_4339 273
263 3300053140 Ga0500573_0175339 Ga0500573_0175339_311_1141 273
264 iso_pu_bacteria 2643221654 2644302376 273

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

123

286

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.8153 59 273
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.8085 59 273
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.7967 59 273
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.79 59 273
4ymu-assembly1.cif.gz_C crystal structure of an amino acid abc transporter complex with arginines and atps 0.7834 62 270
ID Description Score Start End Superfamily
af_Q2G1L9_66_265_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9279 63 270 1.10.3720.10
af_Q2G225_74_270_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9224 67 270 1.10.3720.10
af_Q2G1L9_66_265_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9103 63 270 1.10.3720.10
af_Q2G225_74_270_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9 67 270 1.10.3720.10
af_P0DP70_1_121_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8719 153 270 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A7X8RY72-F1-model_v4 ABC transporter permease subunit 0.9489 63 270 GO:0005886
GO:0055085
AF-A0A529IHV2-F1-model_v4 deleted 0.9459 63 270
AF-A0A3S1RVE4-F1-model_v4 Phosphonate ABC transporter, permease protein PhnE 0.9443 67 270 GO:0005886
GO:0015416
AF-A0A1W1XHZ3-F1-model_v4 Phosphonate transport system permease protein 0.944 54 270 GO:0005886
GO:0015416
GO:0030313
AF-A0A2N1SUL6-F1-model_v4 deleted 0.9436 63 272

Feature Viewer

pLDDT pTM Quality
85.94 0.78 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map