F372498

General Info

Members Datasets Scaffolds Average Seq Length
264 215 528 188

Family's Representative Sequence

Representative Sequence 3300005719|Ga0068861_100315150|Ga0068861_1003151502
Length 214
Sequence LDECPVIGSNRAIAAGQATQYLGIGMGSTNFSITYQTEARDRPLSAISVRPAAGDPRRGWLTADGWTVPVALGRGGILANKREGDGGTPRGTFYPRQLWWRADRHPKPRTFLPVRPIQPEDAWCEDPQDRHYNQPICLVRDQAGDRLTREDHLYDFIVEIDHNAAPRIAGRGSAVFLHLARTNFSPTAGCVSMTKSDMLRLLRRMSPQTKIIIG

Samples

Sample ID Description Type Environment
1 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
7 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
34 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
68 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
70 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
71 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
103 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
106 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
107 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
108 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
109 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
110 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
111 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
112 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
113 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
114 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
115 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
116 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
117 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
118 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
119 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
120 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
121 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
122 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
123 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
124 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
125 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
126 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
127 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
128 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
129 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
130 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
131 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
132 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
133 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
134 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
135 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
136 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
137 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
138 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
139 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
140 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
141 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
142 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
143 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
144 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
145 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
146 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
147 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
148 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
149 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
150 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
151 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
152 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
153 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
154 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
157 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
158 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
159 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
160 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
161 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
162 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
163 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
164 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
165 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
166 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
167 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
168 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
169 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
170 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
172 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
173 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
174 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
175 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
176 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
177 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
178 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
179 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
180 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
181 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
182 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
183 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
184 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
185 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
186 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
187 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
188 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
189 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
192 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
193 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
194 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
195 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
196 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
197 2906610324
198 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
199 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
200 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
201 2922425934
202 2932794094 Bradyrhizobium sp. S3.2.6 Isolate Nodule
203 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
204 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
205 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
206 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
207 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
208 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
209 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
210 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
211 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
212 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
213 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
214 8006926726 Bradyrhizobium guangdongense SM32 Isolate Unclassified
215 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.6
Metatranscriptomes 0
Isolates 8.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.5
Nodule 6.06
Rhizoplane 7.95
Rhizosphere 66.29
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068861_100315150 3300005719 Bacteria 1360
2 JGI25165J46597_1005763 3300003214 Bacteria 2318
3 JGI25153J46596_10045988 3300003215 Bacteria 1297
4 rootL2_10025347 3300003322 Bacteria 1677
5 JGI25160J50197_1043674 3300003354 Bacteria 1007
6 Ga0055542_1004981 3300003762 Bacteria 3087
7 Ga0055543_1009901 3300004625 Bacteria 2024
8 Ga0065165_1000365 3300005262 Bacteria 74017
9 Ga0065165_1003953 3300005262 Bacteria 9728
10 Ga0068869_100189792 3300005334 Bacteria 1615
11 Ga0070661_100453281 3300005344 Bacteria 1021
12 Ga0070668_100053569 3300005347 Bacteria 3111
13 Ga0070668_100100937 3300005347 Bacteria 2286
14 Ga0070671_100350690 3300005355 Bacteria 1259
15 Ga0070673_100319945 3300005364 Bacteria 1370
16 Ga0070688_100391854 3300005365 Bacteria 1026
17 Ga0070659_100868275 3300005366 Bacteria 787
18 Ga0070709_10006302 3300005434 Bacteria 6460
19 Ga0070713_100118852 3300005436 Bacteria 2315
20 Ga0070713_100395397 3300005436 Bacteria 1290
21 Ga0070710_10147864 3300005437 Bacteria 1447
22 Ga0070711_100049550 3300005439 Bacteria 2877
23 Ga0070663_100004283 3300005455 Bacteria 8352
24 Ga0070663_100120103 3300005455 Bacteria 1984
25 Ga0070663_100306079 3300005455 Bacteria 1274
26 Ga0070678_100155868 3300005456 Bacteria 1845
27 Ga0068867_100286946 3300005459 Bacteria 1351
28 Ga0070697_100917907 3300005536 Bacteria 777
29 Ga0068853_100179494 3300005539 Bacteria 1919
30 Ga0070672_100643540 3300005543 Bacteria 926
31 Ga0070672_100686014 3300005543 Bacteria 896
32 Ga0070665_100032443 3300005548 Bacteria 5256
33 Ga0070665_100185408 3300005548 Bacteria 2081
34 Ga0070664_100200722 3300005564 Bacteria 1780
35 Ga0068854_100165201 3300005578 Bacteria 1718
36 Ga0070702_100096020 3300005615 Bacteria 1808
37 Ga0070702_100214598 3300005615 Bacteria 1283
38 Ga0068852_100061074 3300005616 Bacteria 3274
39 Ga0068852_100485277 3300005616 Bacteria 1229
40 Ga0068859_100086008 3300005617 Bacteria 3190
41 Ga0068859_100671432 3300005617 Bacteria 1128
42 Ga0068864_100031888 3300005618 Bacteria 4473
43 Ga0068866_10064108 3300005718 Bacteria 1918
44 Ga0068861_100204793 3300005719 Bacteria 1658
45 Ga0068851_10035494 3300005834 Bacteria 2493
46 Ga0068863_100436561 3300005841 Bacteria 1284
47 Ga0068858_100018320 3300005842 Bacteria 6557
48 Ga0075365_10125772 3300006038 Bacteria 1771
49 Ga0075364_10473870 3300006051 Bacteria 856
50 Ga0070716_100637031 3300006173 Bacteria 807
51 Ga0070712_100005199 3300006175 Bacteria 8046
52 Ga0070712_100235701 3300006175 Bacteria 1455
53 Ga0075369_10231695 3300006186 Bacteria 856
54 Ga0097621_100170698 3300006237 Bacteria 1874
55 Ga0068871_100543535 3300006358 Bacteria 1051
56 Ga0097620_100086008 3300006931 Bacteria 3190
57 Ga0097620_100671387 3300006931 Bacteria 1128
58 Ga0075435_100089983 3300007076 Bacteria 2531
59 Ga0111539_11344800 3300009094 Bacteria 829
60 Ga0105245_10068658 3300009098 Bacteria 3212
61 Ga0105245_10417416 3300009098 Bacteria 1344
62 Ga0105245_10602074 3300009098 Bacteria 1126
63 Ga0105247_10243066 3300009101 Bacteria 1227
64 Ga0105243_10466193 3300009148 Bacteria 1189
65 Ga0105241_10266988 3300009174 Bacteria 1456
66 Ga0105248_10696328 3300009177 Bacteria 1146
67 Ga0105248_10783270 3300009177 Bacteria 1076
68 Ga0105248_10887587 3300009177 Bacteria 1007
69 Ga0105237_10558641 3300009545 Bacteria 1151
70 Ga0105238_10052206 3300009551 Bacteria 4110
71 Ga0105238_11113827 3300009551 Bacteria 812
72 Ga0105249_10717569 3300009553 Bacteria 1060
73 Ga0105239_10058274 3300010375 Bacteria 4238
74 Ga0105239_10102447 3300010375 Bacteria 3168
75 Ga0105239_10504954 3300010375 Bacteria 1375
76 Ga0105246_10029026 3300011119 Bacteria 3638
77 Ga0157374_10040671 3300013296 Bacteria 4282
78 Ga0157374_10804618 3300013296 Bacteria 956
79 Ga0157374_10814792 3300013296 Bacteria 950
80 Ga0157378_10433818 3300013297 Bacteria 1301
81 Ga0163162_10030064 3300013306 Bacteria 5380
82 Ga0157375_10015063 3300013308 Bacteria 6915
83 Ga0157375_10362470 3300013308 Bacteria 1616
84 Ga0157375_10489702 3300013308 Bacteria 1394
85 Ga0163163_10095999 3300014325 Bacteria 2984
86 Ga0163163_10284574 3300014325 Bacteria 1705
87 Ga0163163_10892661 3300014325 Bacteria 952
88 Ga0157380_10207905 3300014326 Bacteria 1742
89 Ga0157376_10017044 3300014969 Bacteria 5532
90 Ga0163161_10147344 3300017792 Bacteria 1786
91 Ga0209677_101570 3300025253 Bacteria 9703
92 Ga0209148_1000282 3300025254 Bacteria 78016
93 Ga0209233_1003283 3300025261 Bacteria 5735
94 Ga0209233_1003656 3300025261 Bacteria 5381
95 Ga0209455_1009197 3300025272 Bacteria 2612
96 Ga0209455_1013316 3300025272 Bacteria 1915
97 Ga0209758_1004028 3300025297 Bacteria 12675
98 Ga0209758_1015313 3300025297 Bacteria 3985
99 Ga0209758_1045356 3300025297 Bacteria 1597
100 Ga0207426_1002598 3300025302 Bacteria 11213
101 Ga0207426_1022231 3300025302 Bacteria 2180
102 Ga0207656_10124811 3300025321 Bacteria 1202
103 Ga0207692_10052824 3300025898 Bacteria 2067
104 Ga0207710_10120994 3300025900 Bacteria 1250
105 Ga0207688_10056344 3300025901 Bacteria 2208
106 Ga0207688_10141276 3300025901 Bacteria 1417
107 Ga0207647_10157778 3300025904 Bacteria 1324
108 Ga0207695_10745857 3300025913 Bacteria 859
109 Ga0207693_10005993 3300025915 Bacteria 10080
110 Ga0207693_10015199 3300025915 Bacteria 6178
111 Ga0207663_10018935 3300025916 Bacteria 3867
112 Ga0207650_10040176 3300025925 Bacteria 3421
113 Ga0207687_10210838 3300025927 Bacteria 1524
114 Ga0207644_10058048 3300025931 Bacteria 2796
115 Ga0207709_10275167 3300025935 Bacteria 1241
116 Ga0207665_11042433 3300025939 Bacteria 651
117 Ga0207691_10603705 3300025940 Bacteria 929
118 Ga0207711_10701481 3300025941 Bacteria 944
119 Ga0207689_10067198 3300025942 Bacteria 2946
120 Ga0207689_10094063 3300025942 Bacteria 2462
121 Ga0207661_10298864 3300025944 Bacteria 1443
122 Ga0207679_10464578 3300025945 Bacteria 1124
123 Ga0207651_10283573 3300025960 Bacteria 1370
124 Ga0207668_10027531 3300025972 Bacteria 3703
125 Ga0207668_10160237 3300025972 Bacteria 1752
126 Ga0207640_10140636 3300025981 Bacteria 1759
127 Ga0207640_10192032 3300025981 Bacteria 1540
128 Ga0207677_10139386 3300026023 Bacteria 1854
129 Ga0207703_10167480 3300026035 Bacteria 1930
130 Ga0207678_10003936 3300026067 Bacteria 13364
131 Ga0207678_10443836 3300026067 Bacteria 1127
132 Ga0207641_10595584 3300026088 Bacteria 1082
133 Ga0207648_10163448 3300026089 Bacteria 1967
134 Ga0207648_10427786 3300026089 Bacteria 1203
135 Ga0207676_10052297 3300026095 Bacteria 3192
136 Ga0207675_100399544 3300026118 Bacteria 1354
137 Ga0207683_10151993 3300026121 Bacteria 2089
138 Ga0207698_10088434 3300026142 Bacteria 2526
139 Ga0268266_10063185 3300028379 Bacteria 3196
140 Ga0307515_10472509 3300028794 Bacteria 867
141 Ga0307516_10026599 3300031730 Bacteria 5874
142 Ga0307409_100709750 3300031995 Bacteria 1006
143 Ga0307414_10431104 3300032004 Bacteria 1152
144 Ga0307415_100416283 3300032126 Bacteria 1152
145 Ga0307510_10047066 3300033180 Bacteria 4627
146 Ga0307510_10176235 3300033180 Bacteria 1709
147 Ga0373945_0269859 3300035116 Bacteria 723
148 Ga0373943_0520108 3300035170 Bacteria 697
149 Ga0373935_0638717 3300035692 Bacteria 780
150 Ga0436364_0064149 3300037853 Bacteria 1680
151 Ga0436365_0168767 3300039437 Bacteria 1526
152 Ga0436360_0346019 3300039438 Bacteria 1427
153 Ga0436363_0612165 3300039450 Bacteria 1006
154 Ga0439465_0093981 3300041413 Bacteria 1029
155 Ga0451791_1446287 3300041451 Bacteria 816
156 Ga0466972_0000119 3300044658 Bacteria 66620
157 Ga0466965_0252148 3300044683 Bacteria 947
158 Ga0466966_0001645 3300044684 Bacteria 14411
159 Ga0466961_0000139 3300044693 Bacteria 48781
160 Ga0466963_0093670 3300044694 Bacteria 2048
161 Ga0466964_0128730 3300044706 Bacteria 1150
162 Ga0466968_0310827 3300044735 Bacteria 760
163 Ga0466959_0005255 3300045049 Bacteria 8841
164 Ga0466959_0512029 3300045049 Bacteria 811
165 Ga0495651_0001844 3300046462 Bacteria 16386
166 Ga0495653_0024385 3300046463 Bacteria 4876
167 Ga0495582_0046135 3300046473 Bacteria 2400
168 Ga0495662_0243851 3300046476 Bacteria 885
169 Ga0495662_0332722 3300046476 Bacteria 747
170 Ga0495664_0018674 3300046477 Bacteria 3977
171 Ga0495606_0092456 3300046507 Bacteria 1858
172 Ga0495608_0064744 3300046511 Bacteria 2396
173 Ga0495628_0055934 3300046516 Bacteria 3107
174 Ga0495630_0326602 3300046517 Bacteria 1173
175 Ga0495630_0631625 3300046517 Bacteria 820
176 Ga0495632_0265044 3300046519 Bacteria 768
177 Ga0495652_0016312 3300046529 Bacteria 6644
178 Ga0495640_0018056 3300046533 Bacteria 5243
179 Ga0495587_0016155 3300046536 Bacteria 4646
180 Ga0495645_0013936 3300046543 Bacteria 5699
181 Ga0495667_0294075 3300046559 Bacteria 1029
182 Ga0495635_0047375 3300046663 Bacteria 2965
183 Ga0495588_0005933 3300046674 Bacteria 5476
184 Ga0495657_0015606 3300046675 Bacteria 5551
185 Ga0495599_0073720 3300046678 Bacteria 2131
186 Ga0495623_0021952 3300046679 Bacteria 4123
187 Ga0495649_0039769 3300046694 Bacteria 2578
188 Ga0495600_0010354 3300046809 Bacteria 5786
189 Ga0495604_0005813 3300047317 Bacteria 9784
190 Ga0495674_0067328 3300047319 Bacteria 3103
191 Ga0495680_0000689 3300047322 Bacteria 37846
192 Ga0495675_0005931 3300047444 Bacteria 7465
193 Ga0495685_010080 3300047447 Bacteria 3166
194 Ga0495684_0053931 3300047471 Bacteria 3067
195 Ga0495602_0018371 3300048088 Bacteria 6986
196 Ga0496100_0203920 3300048903 Bacteria 1443
197 Ga0496102_0001314 3300048905 Bacteria 22298
198 Ga0496102_0297396 3300048905 Bacteria 1521
199 Ga0496103_0114833 3300048906 Bacteria 1712
200 Ga0496104_0059609 3300048907 Bacteria 3613
201 Ga0496104_0807993 3300048907 Bacteria 844
202 Ga0496105_0041194 3300048908 Bacteria 3806
203 Ga0496105_0085784 3300048908 Bacteria 2602
204 Ga0496107_0002944 3300048910 Bacteria 11270
205 Ga0496107_0085779 3300048910 Bacteria 2298
206 Ga0496107_0325549 3300048910 Bacteria 1144
207 Ga0496108_0254544 3300048911 Bacteria 1528
208 Ga0496110_0023351 3300048913 Bacteria 5258
209 Ga0496112_0499335 3300048915 Bacteria 1152
210 Ga0496113_0050127 3300048916 Bacteria 3111
211 Ga0496114_0017033 3300048917 Bacteria 5861
212 Ga0496114_0508049 3300048917 Bacteria 1066
213 Ga0496114_0613984 3300048917 Bacteria 958
214 Ga0496115_0003266 3300048918 Bacteria 11628
215 Ga0496118_0037627 3300048921 Bacteria 3891
216 Ga0496122_0279146 3300048925 Bacteria 914
217 Ga0496125_0432497 3300048928 Bacteria 759
218 Ga0496126_0528347 3300048929 Bacteria 939
219 Ga0501043_0496034 3300049579 Bacteria 913
220 Ga0501071_0019012 3300049587 Bacteria 4767
221 Ga0501072_0003304 3300049588 Bacteria 12130
222 Ga0501079_0050035 3300049741 Bacteria 3226
223 Ga0501081_0238888 3300049743 Bacteria 1325
224 nmdc:mga0yw44_283940_c1 3300050492 Bacteria 1107
225 nmdc:mga06z11_133964_c1 3300050494 Bacteria 1394
226 nmdc:mga0rr50_568487_c1 3300050513 Bacteria 966
227 Ga0495601_0223937 3300053077 Bacteria 1229
228 Ga0495612_0280874 3300053078 Bacteria 744
229 Ga0500566_0098613 3300053094 Bacteria 1605
230 Ga0500640_035908 3300053095 Bacteria 2178
231 Ga0500554_031477 3300053102 Bacteria 1567
232 Ga0500595_038166 3300053119 Bacteria 1563
233 Ga0500607_121160 3300053121 Bacteria 1264
234 Ga0500559_0046940 3300053136 Bacteria 1895
235 Ga0500585_151275 3300053144 Bacteria 810
236 Ga0500638_152238 3300053162 Bacteria 1027
237 Ga0500636_0011956 3300053177 Bacteria 5084
238 Ga0500552_006125 3300053733 Bacteria 1338
239 Ga0501084_0143267 3300054114 Bacteria 2013
240 Ga0501082_0138149 3300060353 Bacteria 2115
241 2513860827 2513237137 Bacteria 9558895
242 2524440883 2524023205 Bacteria 8918781
243 2671122455 2667528175 Bacteria 7532676
244 2793072937 2791355197 Bacteria 8420563
245 2904713186 2904711408 Bacteria 9771557
246 2906613882
247 2906642325 2906635258 Bacteria 8601019
248 2906667353 2906660503 Bacteria 8595048
249 2908747452 2908739725 Bacteria 8628932
250 2922434216
251 2932794310 2932794094 Bacteria 7915132
252 2933580679 2933577622 Bacteria 9116884
253 2935686410 2935684952 Bacteria 9590419
254 2935716098 2935713505 Bacteria 9608509
255 2935723778 2935722832 Bacteria 9608746
256 2935735333 2935732158 Bacteria 9706831
257 2935743876 2935741537 Bacteria 9707219
258 2935752376 2935750917 Bacteria 9590372
259 2940558289 2940556831 Bacteria 9590747
260 2941535506 2941531003 Bacteria 7653939
261 3005592204 3005587118 Bacteria 7794411
262 3005595058 3005594810 Bacteria 8716512
263 8006927897 8006926726 Bacteria 6749210
264 8019572490 8019565922 Bacteria 9639779
265 Ga0068861_100315150
266 JGI25165J46597_1005763
267 JGI25153J46596_10045988
268 rootL2_10025347
269 JGI25160J50197_1043674
270 Ga0055542_1004981
271 Ga0055543_1009901
272 Ga0065165_1000365
273 Ga0065165_1003953
274 Ga0068869_100189792
275 Ga0070661_100453281
276 Ga0070668_100053569
277 Ga0070668_100100937
278 Ga0070671_100350690
279 Ga0070673_100319945
280 Ga0070688_100391854
281 Ga0070659_100868275
282 Ga0070709_10006302
283 Ga0070713_100118852
284 Ga0070713_100395397
285 Ga0070710_10147864
286 Ga0070711_100049550
287 Ga0070663_100004283
288 Ga0070663_100120103
289 Ga0070663_100306079
290 Ga0070678_100155868
291 Ga0068867_100286946
292 Ga0070697_100917907
293 Ga0068853_100179494
294 Ga0070672_100643540
295 Ga0070672_100686014
296 Ga0070665_100032443
297 Ga0070665_100185408
298 Ga0070664_100200722
299 Ga0068854_100165201
300 Ga0070702_100096020
301 Ga0070702_100214598
302 Ga0068852_100061074
303 Ga0068852_100485277
304 Ga0068859_100086008
305 Ga0068859_100671432
306 Ga0068864_100031888
307 Ga0068866_10064108
308 Ga0068861_100204793
309 Ga0068851_10035494
310 Ga0068863_100436561
311 Ga0068858_100018320
312 Ga0075365_10125772
313 Ga0075364_10473870
314 Ga0070716_100637031
315 Ga0070712_100005199
316 Ga0070712_100235701
317 Ga0075369_10231695
318 Ga0097621_100170698
319 Ga0068871_100543535
320 Ga0097620_100086008
321 Ga0097620_100671387
322 Ga0075435_100089983
323 Ga0111539_11344800
324 Ga0105245_10068658
325 Ga0105245_10417416
326 Ga0105245_10602074
327 Ga0105247_10243066
328 Ga0105243_10466193
329 Ga0105241_10266988
330 Ga0105248_10696328
331 Ga0105248_10783270
332 Ga0105248_10887587
333 Ga0105237_10558641
334 Ga0105238_10052206
335 Ga0105238_11113827
336 Ga0105249_10717569
337 Ga0105239_10058274
338 Ga0105239_10102447
339 Ga0105239_10504954
340 Ga0105246_10029026
341 Ga0157374_10040671
342 Ga0157374_10804618
343 Ga0157374_10814792
344 Ga0157378_10433818
345 Ga0163162_10030064
346 Ga0157375_10015063
347 Ga0157375_10362470
348 Ga0157375_10489702
349 Ga0163163_10095999
350 Ga0163163_10284574
351 Ga0163163_10892661
352 Ga0157380_10207905
353 Ga0157376_10017044
354 Ga0163161_10147344
355 Ga0209677_101570
356 Ga0209148_1000282
357 Ga0209233_1003283
358 Ga0209233_1003656
359 Ga0209455_1009197
360 Ga0209455_1013316
361 Ga0209758_1004028
362 Ga0209758_1015313
363 Ga0209758_1045356
364 Ga0207426_1002598
365 Ga0207426_1022231
366 Ga0207656_10124811
367 Ga0207692_10052824
368 Ga0207710_10120994
369 Ga0207688_10056344
370 Ga0207688_10141276
371 Ga0207647_10157778
372 Ga0207695_10745857
373 Ga0207693_10005993
374 Ga0207693_10015199
375 Ga0207663_10018935
376 Ga0207650_10040176
377 Ga0207687_10210838
378 Ga0207644_10058048
379 Ga0207709_10275167
380 Ga0207665_11042433
381 Ga0207691_10603705
382 Ga0207711_10701481
383 Ga0207689_10067198
384 Ga0207689_10094063
385 Ga0207661_10298864
386 Ga0207679_10464578
387 Ga0207651_10283573
388 Ga0207668_10027531
389 Ga0207668_10160237
390 Ga0207640_10140636
391 Ga0207640_10192032
392 Ga0207677_10139386
393 Ga0207703_10167480
394 Ga0207678_10003936
395 Ga0207678_10443836
396 Ga0207641_10595584
397 Ga0207648_10163448
398 Ga0207648_10427786
399 Ga0207676_10052297
400 Ga0207675_100399544
401 Ga0207683_10151993
402 Ga0207698_10088434
403 Ga0268266_10063185
404 Ga0307515_10472509
405 Ga0307516_10026599
406 Ga0307409_100709750
407 Ga0307414_10431104
408 Ga0307415_100416283
409 Ga0307510_10047066
410 Ga0307510_10176235
411 Ga0373945_0269859
412 Ga0373943_0520108
413 Ga0373935_0638717
414 Ga0436364_0064149
415 Ga0436365_0168767
416 Ga0436360_0346019
417 Ga0436363_0612165
418 Ga0439465_0093981
419 Ga0451791_1446287
420 Ga0466972_0000119
421 Ga0466965_0252148
422 Ga0466966_0001645
423 Ga0466961_0000139
424 Ga0466963_0093670
425 Ga0466964_0128730
426 Ga0466968_0310827
427 Ga0466959_0005255
428 Ga0466959_0512029
429 Ga0495651_0001844
430 Ga0495653_0024385
431 Ga0495582_0046135
432 Ga0495662_0243851
433 Ga0495662_0332722
434 Ga0495664_0018674
435 Ga0495606_0092456
436 Ga0495608_0064744
437 Ga0495628_0055934
438 Ga0495630_0326602
439 Ga0495630_0631625
440 Ga0495632_0265044
441 Ga0495652_0016312
442 Ga0495640_0018056
443 Ga0495587_0016155
444 Ga0495645_0013936
445 Ga0495667_0294075
446 Ga0495635_0047375
447 Ga0495588_0005933
448 Ga0495657_0015606
449 Ga0495599_0073720
450 Ga0495623_0021952
451 Ga0495649_0039769
452 Ga0495600_0010354
453 Ga0495604_0005813
454 Ga0495674_0067328
455 Ga0495680_0000689
456 Ga0495675_0005931
457 Ga0495685_010080
458 Ga0495684_0053931
459 Ga0495602_0018371
460 Ga0496100_0203920
461 Ga0496102_0001314
462 Ga0496102_0297396
463 Ga0496103_0114833
464 Ga0496104_0059609
465 Ga0496104_0807993
466 Ga0496105_0041194
467 Ga0496105_0085784
468 Ga0496107_0002944
469 Ga0496107_0085779
470 Ga0496107_0325549
471 Ga0496108_0254544
472 Ga0496110_0023351
473 Ga0496112_0499335
474 Ga0496113_0050127
475 Ga0496114_0017033
476 Ga0496114_0508049
477 Ga0496114_0613984
478 Ga0496115_0003266
479 Ga0496118_0037627
480 Ga0496122_0279146
481 Ga0496125_0432497
482 Ga0496126_0528347
483 Ga0501043_0496034
484 Ga0501071_0019012
485 Ga0501072_0003304
486 Ga0501079_0050035
487 Ga0501081_0238888
488 nmdc:mga0yw44_283940_c1
489 nmdc:mga06z11_133964_c1
490 nmdc:mga0rr50_568487_c1
491 Ga0495601_0223937
492 Ga0495612_0280874
493 Ga0500566_0098613
494 Ga0500640_035908
495 Ga0500554_031477
496 Ga0500595_038166
497 Ga0500607_121160
498 Ga0500559_0046940
499 Ga0500585_151275
500 Ga0500638_152238
501 Ga0500636_0011956
502 Ga0500552_006125
503 Ga0501084_0143267
504 Ga0501082_0138149
505 2513860827
506 2524440883
507 2671122455
508 2793072937
509 2904713186
510 2906613882
511 2906642325
512 2906667353
513 2908747452
514 2922434216
515 2932794310
516 2933580679
517 2935686410
518 2935716098
519 2935723778
520 2935735333
521 2935743876
522 2935752376
523 2940558289
524 2941535506
525 3005592204
526 3005595058
527 8006927897
528 8019572490

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03734

YkuD

L,D-transpeptidase catalytic domain

53

213

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7egb-assembly1.cif.gz_G tfiid-based holo pic on scp promoter 0.6855 22 47
3to1-assembly1.cif.gz_A two surfaces on rtt106 mediate histone binding and chaperone activity 0.684 18 47
1z3k-assembly1.cif.gz_A structural insight into the binding diversity between the tyr-phosphorylated human ephrinbs and nck2 sh2 domain 0.6448 16 47
7o21-assembly1.cif.gz_A structure of bdellovibrio bacteriovorus bd1075 0.6307 17 189
6zm3-assembly2.cif.gz_CCC the structure of an e2 ubiquitin-conjugating complex (ubc2-uev1) essential for leishmania amastigote differentiation 0.605 14 47
ID Description Score Start End Superfamily
af_Q9P382_43_455_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7294 19 47 2.130.10.10
af_Q8WYP5_1_489_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7066 20 46 2.130.10.10
af_Q8IQJ4_213_269_2.170.140.10 Mainly Beta;Beta Complex;Antimicrobial Protein, Tachycitin; Chain A;Chitin binding domain 0.6887 16 46 2.170.140.10
af_O53328_2_119_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.6818 32 47 2.30.110.10
af_Q42523_488_663_3.30.700.40 Alpha Beta;2-Layer Sandwich;Glycoprotein, Type 4 Pilin; 0.6633 22 47 3.30.700.40
ID Description Score Start End GO Terms
AF-A0A160U362-F1-model_v4 deleted 0.9155 74 189
AF-A0A160U362-F1-model_v4 deleted 0.9008 74 189
AF-A0A317HT14-F1-model_v4 deleted 0.8931 54 189
AF-A0A317HT14-F1-model_v4 deleted 0.8869 54 189
AF-A0A1W6ZPM1-F1-model_v4 L,D-TPase catalytic domain-containing protein 0.8859 17 189 GO:0004180
GO:0008360
GO:0009252
GO:0016740
GO:0071555

Map