F372481

General Info

Members Datasets Scaffolds Average Seq Length
264 166 236 436

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100184152|Ga0068855_1001841522
Length 477
Sequence LQLKVADFQFAICNTVNQFHNLAIKQSLQLKKFFQQYYSNLFLTDRLFTALGCCILLFLLKFFFPWLGDIPEIATGAVFILCFIDIFILYRNNQGIEAKRLTSKRLSNGDENPIQIEIRNEYGFGVNARIIDEIPFQFQIRDKDFKLHLKPAEIKSIHYNLRPTKRGEYDFGFIRAYISSPIGLTSRRYNFDGVKILPVFPSFIHLGQYELMAASRYLTEFGIKKIRKIGQSNEFDQIKNYVGGDDIRTINWKATARKGGLMVNTYIDEKSQHVYCIIDKSRVMRMPFEGLSLLDYAINATVALSKVAMLKEDKAGLITLSETIGSVVPADRKASQLGSIMNVLYKEKTRYLESNLEALYTTVRSVVKQRGLLVFFTNFESLSALQRQLPYLKRIAKYHLLLVVFFENTELKGLSTELAKDVEGIYHKTIAEKFIYEKKLMVKELNKHGILAILTPPQKLTVNVINQYLALKAQQRI

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2738541284 Pedobacter sp. YR016 Isolate Unclassified
5 2738541302 Pedobacter sp. CF074 Isolate Unclassified
6 2739367651 Pedobacter sp. OK291 Isolate Unclassified
7 2739367656 Pedobacter sp. CF523 Isolate Unclassified
8 2739367663 Pedobacter sp. YR510 Isolate Unclassified
9 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
10 2818991437 Pedobacter terrae 518 Isolate Unclassified
11 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
12 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
13 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
14 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
15 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
16 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
17 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
18 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
19 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
20 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
21 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
22 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
23 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
24 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
25 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
26 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
27 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
28 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
29 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
30 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
31 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
32 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
33 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
34 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
35 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
36 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
37 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
38 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
39 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
40 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
41 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
42 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
43 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
44 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
45 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
46 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
47 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
48 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
49 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
50 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
51 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
52 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
53 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
54 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
55 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
56 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
57 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
58 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
59 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
60 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
61 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
62 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
63 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
64 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
65 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
66 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
67 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
68 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
69 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
80 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
81 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
82 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
83 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
84 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
85 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
86 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
87 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
88 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
89 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
91 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
92 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
93 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
95 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
96 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
98 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
100 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
101 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
103 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
125 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
126 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
127 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
128 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
129 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
130 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
131 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
132 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
133 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
134 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
135 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
136 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
137 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
138 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
139 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
140 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
141 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
142 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
143 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
144 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
145 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
146 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
147 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
148 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
149 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
150 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
151 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
152 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
153 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
154 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
157 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
158 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
159 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
160 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
161 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
162 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
163 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
164 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
165 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
166 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.02
Metatranscriptomes 0
Isolates 10.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.97
Nodule 0
Rhizoplane 0.38
Rhizosphere 61.74
Stem 0
Stem Tuber 0
Unclassified 15.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2276363 2162886007 Bacteria 13156
2 JGI24737J22298_10000097 3300001990 Bacteria 25865
3 JGI24735J21928_10000007 3300002067 Bacteria 333510
4 JGI25154J39366_1000001 3300002738 Bacteria 483450
5 JGI25164J39214_1001671 3300002772 Bacteria 4553
6 JGI25152J39213_1000054 3300002773 Bacteria 76796
7 JGI25150J39212_1000003 3300002774 Bacteria 508651
8 JGI25150J39212_1000004 3300002774 Bacteria 417320
9 JGI25151J46595_10000002 3300003187 Bacteria 731381
10 JGI25165J46597_1000426 3300003214 Bacteria 43457
11 JGI25153J46596_10000015 3300003215 Bacteria 289820
12 JGI25153J46596_10001222 3300003215 Bacteria 15479
13 rootH1_10045618 3300003316 Bacteria 2724
14 rootH1_10058613 3300003316 Bacteria 3098
15 rootH1_10058613 3300003323 Bacteria 8666
16 rootH1_10086689 3300003316 Bacteria 7588
17 rootL2_10004090 3300003322 Bacteria 3989
18 rootL2_10020951 3300003322 Bacteria 10036
19 rootL2_10044713 3300003322 Bacteria 5047
20 rootL2_10046020 3300003322 Bacteria 9469
21 rootL2_10077299 3300003322 Bacteria 5226
22 rootL2_10156444 3300003322 Bacteria 8320
23 rootH1_10002862 3300003323 Bacteria 4082
24 rootH1_10050749 3300003323 Bacteria 18676
25 rootH1_10094045 3300003323 Bacteria 4570
26 rootH1_10100346 3300003323 Bacteria 4520
27 rootH1_10112786 3300003323 Bacteria 18142
28 rootH1_10126351 3300003323 Bacteria 4185
29 Ga0055526_1007308 3300003771 Bacteria 5777
30 Ga0055536_1000006 3300003781 Bacteria 347733
31 Ga0055528_1002064 3300003790 Bacteria 11220
32 Ga0055530_10000393 3300003791 Bacteria 39108
33 Ga0055530_10000679 3300003791 Bacteria 28914
34 Ga0055531_10000133 3300003794 Bacteria 84995
35 Ga0055531_10000166 3300003794 Bacteria 74728
36 Ga0055543_1004581 3300004625 Bacteria 3719
37 Ga0065165_1000105 3300005262 Bacteria 140409
38 Ga0065714_10002609 3300005288 Bacteria 23390
39 Ga0065714_10008428 3300005288 Bacteria 4428
40 Ga0065714_10064558 3300005288 Bacteria 36374
41 Ga0065714_10064803 3300005288 Bacteria 18319
42 Ga0065714_10080447 3300005288 Bacteria 2439
43 Ga0065714_10087480 3300005288 Bacteria 2055
44 Ga0065704_10000670 3300005289 Bacteria 14748
45 Ga0065704_10074720 3300005289 Bacteria 6062
46 Ga0070658_10000008 3300005327 Bacteria 319912
47 Ga0070658_10012179 3300005327 Bacteria 6904
48 Ga0070683_100005282 3300005329 Bacteria 10755
49 Ga0070677_10069350 3300005333 Bacteria 1479
50 Ga0068869_100153944 3300005334 Unclassified 1785
51 Ga0070687_100008176 3300005343 Bacteria 4414
52 Ga0070671_100051665 3300005355 Bacteria 3418
53 Ga0070713_100195961 3300005436 Bacteria 1822
54 Ga0068853_100005363 3300005539 Bacteria 10041
55 Ga0068853_100139151 3300005539 Bacteria 2178
56 Ga0068855_100003173 3300005563 Bacteria 20124
57 Ga0068855_100031871 3300005563 Bacteria 6293
58 Ga0068855_100184152 3300005563 Bacteria 2360
59 Ga0068855_100433741 3300005563 Bacteria 1436
60 Ga0068857_100033404 3300005577 Bacteria 4550
61 Ga0068854_100021904 3300005578 Bacteria 4343
62 Ga0068854_100022726 3300005578 Bacteria 4278
63 Ga0068856_100000668 3300005614 Bacteria 37241
64 Ga0068856_100047322 3300005614 Bacteria 4237
65 Ga0068856_100086670 3300005614 Bacteria 3112
66 Ga0068856_100236731 3300005614 Unclassified 1841
67 Ga0070702_100052255 3300005615 Unclassified 2343
68 Ga0068852_100000795 3300005616 Bacteria 20782
69 Ga0068852_100051409 3300005616 Bacteria 3536
70 Ga0075366_10000717 3300006195 Bacteria 15728
71 Ga0075366_10003484 3300006195 Bacteria 8315
72 Ga0075366_10036636 3300006195 Bacteria 2893
73 Ga0068865_100000063 3300006881 Bacteria 56994
74 Ga0105240_10000010 3300009093 Bacteria 537830
75 Ga0105240_10011818 3300009093 Bacteria 12124
76 Ga0105240_10153358 3300009093 Bacteria 2742
77 Ga0105241_10039344 3300009174 Bacteria 3567
78 Ga0105237_10000243 3300009545 Bacteria 77722
79 Ga0105237_10001876 3300009545 Bacteria 26824
80 Ga0105237_10002823 3300009545 Bacteria 21125
81 Ga0105237_10028377 3300009545 Bacteria 5701
82 Ga0105237_10028477 3300009545 Bacteria 5690
83 Ga0105238_10145243 3300009551 Bacteria 2349
84 Ga0105238_10249914 3300009551 Bacteria 1751
85 Ga0105238_10270220 3300009551 Bacteria 1681
86 Ga0105239_10000017 3300010375 Bacteria 290760
87 Ga0105239_10000049 3300010375 Bacteria 177578
88 Ga0105239_10001486 3300010375 Bacteria 31166
89 Ga0105239_10004763 3300010375 Bacteria 16108
90 Ga0105239_10048419 3300010375 Bacteria 4661
91 Ga0105239_10218466 3300010375 Bacteria 2137
92 Ga0157373_10000271 3300013100 Bacteria 41646
93 Ga0157373_10000320 3300013100 Bacteria 38737
94 Ga0157373_10098401 3300013100 Bacteria 2059
95 Ga0157371_10000025 3300013102 Bacteria 279746
96 Ga0157371_10003580 3300013102 Bacteria 14001
97 Ga0157371_10003607 3300013102 Bacteria 13949
98 Ga0157370_10000383 3300013104 Bacteria 55670
99 Ga0157370_10020417 3300013104 Bacteria 6616
100 Ga0157370_10061306 3300013104 Bacteria 3570
101 Ga0157370_10064467 3300013104 Bacteria 3469
102 Ga0157370_10215025 3300013104 Bacteria 1781
103 Ga0157369_10000164 3300013105 Bacteria 94229
104 Ga0157378_10011457 3300013297 Bacteria 7761
105 Ga0157378_10013502 3300013297 Bacteria 7143
106 Ga0163162_10000065 3300013306 Bacteria 102191
107 Ga0163162_10004456 3300013306 Bacteria 13495
108 Ga0157372_10000838 3300013307 Bacteria 33401
109 Ga0157372_10001854 3300013307 Bacteria 22916
110 Ga0157372_10208308 3300013307 Bacteria 2265
111 Ga0157375_10014001 3300013308 Bacteria 7153
112 Ga0157375_10329210 3300013308 Bacteria 1692
113 Ga0157375_10354482 3300013308 Bacteria 1633
114 Ga0157380_10003097 3300014326 Bacteria 11345
115 Ga0182008_10000002 3300014497 Bacteria 480216
116 Ga0182008_10000601 3300014497 Bacteria 26469
117 Ga0157377_10001294 3300014745 Bacteria 10717
118 Ga0182006_1000351 3300015261 Bacteria 38720
119 Ga0182006_1000546 3300015261 Bacteria 28457
120 Ga0182007_10000005 3300015262 Bacteria 442702
121 Ga0183373_1002 3300015682 Bacteria 990153
122 Ga0163161_10000135 3300017792 Bacteria 69859
123 Ga0163161_10000539 3300017792 Bacteria 30832
124 Ga0163161_10066575 3300017792 Bacteria 2631
125 Ga0207427_100204 3300025231 Bacteria 54529
126 Ga0209437_100048 3300025233 Bacteria 405107
127 Ga0209258_100041 3300025242 Bacteria 381381
128 Ga0207425_1000003 3300025245 Bacteria 1145342
129 Ga0207425_1007840 3300025245 Unclassified 2782
130 Ga0209646_1000002 3300025246 Bacteria 1425781
131 Ga0209026_1000201 3300025250 Bacteria 82838
132 Ga0209026_1000627 3300025250 Bacteria 22217
133 Ga0209026_1005944 3300025250 Bacteria 3126
134 Ga0209026_1009348 3300025250 Bacteria 1933
135 Ga0209148_1000795 3300025254 Bacteria 23308
136 Ga0209129_1000014 3300025258 Bacteria 509018
137 Ga0209233_1000029 3300025261 Bacteria 641642
138 Ga0209233_1000485 3300025261 Bacteria 24300
139 Ga0209455_1007877 3300025272 Bacteria 2955
140 Ga0209673_1000096 3300025273 Bacteria 194819
141 Ga0209676_1000039 3300025292 Bacteria 443158
142 Ga0209025_1000007 3300025294 Bacteria 1145109
143 Ga0209758_1000012 3300025297 Bacteria 949866
144 Ga0209758_1006375 3300025297 Bacteria 8521
145 Ga0209758_1017626 3300025297 Bacteria 3542
146 Ga0209050_1000033 3300025298 Bacteria 442615
147 Ga0209050_1000207 3300025298 Bacteria 131328
148 Ga0207426_1000571 3300025302 Bacteria 49864
149 Ga0207426_1005312 3300025302 Bacteria 5930
150 Ga0207426_1028693 3300025302 Bacteria 1842
151 Ga0209257_1000001 3300025304 Bacteria 2274655
152 Ga0207647_10030926 3300025904 Bacteria 3451
153 Ga0207705_10000035 3300025909 Bacteria 201649
154 Ga0207654_10012227 3300025911 Bacteria 4394
155 Ga0207695_10000019 3300025913 Bacteria 732137
156 Ga0207695_10012032 3300025913 Bacteria 10407
157 Ga0207695_10227774 3300025913 Bacteria 1769
158 Ga0207671_10000257 3300025914 Bacteria 79555
159 Ga0207671_10009357 3300025914 Bacteria 8194
160 Ga0207671_10017387 3300025914 Bacteria 5547
161 Ga0207662_10018211 3300025918 Bacteria 3980
162 Ga0207694_10243771 3300025924 Bacteria 1469
163 Ga0207644_10031880 3300025931 Bacteria 3675
164 Ga0207704_10000180 3300025938 Bacteria 33319
165 Ga0207689_10102705 3300025942 Unclassified 2349
166 Ga0207661_10050947 3300025944 Bacteria 3301
167 Ga0207679_10039190 3300025945 Bacteria 3382
168 Ga0207667_10000275 3300025949 Bacteria 71281
169 Ga0207677_10032935 3300026023 Bacteria 3337
170 Ga0207677_10185447 3300026023 Bacteria 1640
171 Ga0207703_10059425 3300026035 Bacteria 3122
172 Ga0207702_10000861 3300026078 Bacteria 31674
173 Ga0207648_10073836 3300026089 Bacteria 2972
174 Ga0207674_10045259 3300026116 Bacteria 4528
175 Ga0207683_10143304 3300026121 Bacteria 2154
176 Ga0207698_10009695 3300026142 Bacteria 6149
177 Ga0307515_10007196 3300028794 Bacteria 22063
178 Ga0307511_10007305 3300030521 Bacteria 11125
179 Ga0307408_100000380 3300031548 Bacteria 40588
180 Ga0307408_100000650 3300031548 Bacteria 29170
181 Ga0307408_100001582 3300031548 Bacteria 16809
182 Ga0307405_10000009 3300031731 Bacteria 259388
183 Ga0307407_10000001 3300031903 Bacteria 570048
184 Ga0307412_10000050 3300031911 Bacteria 151527
185 Ga0307412_10006291 3300031911 Bacteria 6706
186 Ga0307416_100000026 3300032002 Bacteria 172622
187 Ga0307414_10003733 3300032004 Bacteria 8173
188 Ga0307414_10004072 3300032004 Bacteria 7880
189 Ga0307411_10004488 3300032005 Bacteria 6693
190 Ga0307411_10156292 3300032005 Bacteria 1702
191 Ga0373941_0003155 3300035115 Bacteria 3704
192 Ga0395905_0000001 3300037471 Bacteria 2037079
193 Ga0395901_0032011 3300038443 Bacteria 5426
194 Ga0439436_0037343 3300041404 Bacteria 1399
195 Ga0495627_012790 3300046453 Bacteria 2966
196 Ga0495650_0000081 3300046471 Bacteria 240957
197 Ga0495585_0000036 3300046492 Bacteria 135914
198 Ga0495583_0012671 3300046506 Bacteria 4753
199 Ga0495606_0000034 3300046507 Bacteria 247705
200 Ga0495606_0012906 3300046507 Bacteria 6649
201 Ga0495606_0021571 3300046507 Bacteria 4717
202 Ga0495610_0000048 3300046512 Bacteria 150249
203 Ga0495610_0000501 3300046512 Bacteria 39971
204 Ga0495610_0003276 3300046512 Bacteria 12761
205 Ga0495610_0011094 3300046512 Bacteria 5534
206 Ga0495616_0008122 3300046513 Bacteria 6241
207 Ga0495652_0138896 3300046529 Bacteria 1913
208 Ga0495633_0000049 3300046558 Bacteria 156684
209 Ga0495633_0009366 3300046558 Bacteria 5415
210 Ga0495633_0027834 3300046558 Bacteria 2759
211 Ga0495668_0000235 3300046616 Bacteria 78964
212 Ga0495625_0000049 3300046660 Bacteria 197646
213 Ga0495661_0003026 3300046665 Bacteria 12671
214 Ga0495661_0069981 3300046665 Bacteria 2055
215 Ga0495649_0000014 3300046694 Bacteria 287408
216 Ga0495660_0001981 3300046810 Bacteria 13342
217 Ga0495687_000249 3300047443 Bacteria 72846
218 Ga0495686_0004135 3300047472 Bacteria 12083
219 Ga0496126_0031214 3300048929 Bacteria 5038
220 nmdc:mga0k408_1481_c1 3300050493 Bacteria 12676
221 nmdc:mga0k408_52321_c1 3300050493 Bacteria 2367
222 nmdc:mga0k408_609_c1 3300050493 Bacteria 19796
223 nmdc:mga08y16_55959_c1 3300050511 Bacteria 4122
224 Ga0500644_0000178 3300053088 Bacteria 40876
225 Ga0500583_0074120 3300053092 Bacteria 1633
226 Ga0500651_0000520 3300053093 Bacteria 19809
227 Ga0500651_0062500 3300053093 Bacteria 2325
228 Ga0500651_0062848 3300053093 Bacteria 2318
229 Ga0500569_008758 3300053109 Bacteria 2326
230 Ga0500658_0009731 3300053134 Bacteria 3543
231 Ga0500577_0001199 3300053142 Bacteria 6628
232 Ga0500616_0001984 3300053153 Bacteria 18187
233 Ga0500622_0001394 3300053156 Bacteria 19463
234 Ga0500622_0003605 3300053156 Bacteria 10195
235 Ga0500633_0010712 3300053160 Bacteria 2467
236 Ga0500636_0022076 3300053177 Bacteria 3766

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026023 Ga0207677_10032935 Ga0207677_100329353 363
2 3300025924 Ga0207694_10243771 Ga0207694_102437711 390
3 3300005288 Ga0065714_10064803 Ga0065714_1006480317 392
4 3300006195 Ga0075366_10036636 Ga0075366_100366363 393
5 3300013307 Ga0157372_10208308 Ga0157372_102083083 393
6 3300025297 Ga0209758_1017626 Ga0209758_10176263 393
7 3300025302 Ga0207426_1028693 Ga0207426_10286931 393
8 3300050493 nmdc:mga0k408_52321_c1 nmdc:mga0k408_52321_c1_850_2193 393
9 3300053093 Ga0500651_0062848 Ga0500651_0062848_35_1222 394
10 3300005539 Ga0068853_100139151 Ga0068853_1001391512 397
11 3300005577 Ga0068857_100033404 Ga0068857_1000334043 397
12 3300005578 Ga0068854_100021904 Ga0068854_1000219043 397
13 3300005614 Ga0068856_100236731 Ga0068856_1002367311 397
14 3300005616 Ga0068852_100000795 Ga0068852_1000007958 397
15 3300009093 Ga0105240_10011818 Ga0105240_100118183 397
16 3300013104 Ga0157370_10061306 Ga0157370_100613062 397
17 3300013307 Ga0157372_10000838 Ga0157372_100008383 397
18 3300025949 Ga0207667_10000275 Ga0207667_1000027513 397
19 3300026116 Ga0207674_10045259 Ga0207674_100452592 397
20 3300026142 Ga0207698_10009695 Ga0207698_100096954 397
21 3300050511 nmdc:mga08y16_55959_c1 nmdc:mga08y16_55959_c1_391_1584 397
22 3300053156 Ga0500622_0001394 Ga0500622_0001394_7127_8467 399
23 3300038443 Ga0395901_0032011 Ga0395901_0032011_1113_2459 402
24 3300003322 rootL2_10044713 rootL2_100447135 406
25 3300041404 Ga0439436_0037343 Ga0439436_0037343_132_1361 408
26 3300046616 Ga0495668_0000235 Ga0495668_0000235_14852_16135 410
27 3300003771 Ga0055526_1007308 Ga0055526_10073083 411
28 3300003790 Ga0055528_1002064 Ga0055528_10020646 411
29 3300025273 Ga0209673_1000096 Ga0209673_1000096124 411
30 3300025297 Ga0209758_1006375 Ga0209758_10063756 412
31 3300003791 Ga0055530_10000393 Ga0055530_1000039318 413
32 3300004625 Ga0055543_1004581 Ga0055543_10045813 413
33 3300005262 Ga0065165_1000105 Ga0065165_1000105139 413
34 3300009545 Ga0105237_10028377 Ga0105237_100283772 413
35 3300009551 Ga0105238_10145243 Ga0105238_101452432 413
36 3300025298 Ga0209050_1000207 Ga0209050_100020785 413
37 3300025302 Ga0207426_1005312 Ga0207426_10053126 413
38 3300025914 Ga0207671_10009357 Ga0207671_100093576 413
39 3300013308 Ga0157375_10354482 Ga0157375_103544821 418
40 3300014497 Ga0182008_10000601 Ga0182008_1000060125 418
41 3300032005 Ga0307411_10156292 Ga0307411_101562921 418
42 3300013306 Ga0163162_10000065 Ga0163162_1000006553 419
43 3300053142 Ga0500577_0001199 Ga0500577_0001199_3910_5250 419
44 3300006195 Ga0075366_10003484 Ga0075366_100034846 420
45 3300050493 nmdc:mga0k408_1481_c1 nmdc:mga0k408_1481_c1_10305_11651 420
46 3300002738 JGI25154J39366_1000001 JGI25154J39366_1000001358 422
47 3300003215 JGI25153J46596_10001222 JGI25153J46596_1000122217 422
48 3300003323 rootH1_10002862 rootH1_100028621 422
49 3300003323 rootH1_10126351 rootH1_101263511 422
50 3300025245 Ga0207425_1007840 Ga0207425_10078403 422
51 3300025246 Ga0209646_1000002 Ga0209646_1000002355 422
52 3300025250 Ga0209026_1000627 Ga0209026_100062719 422
53 3300025302 Ga0207426_1000571 Ga0207426_100057127 422
54 3300053088 Ga0500644_0000178 Ga0500644_0000178_19825_21096 422
55 3300053093 Ga0500651_0062500 Ga0500651_0062500_65_1336 422
56 3300053109 Ga0500569_008758 Ga0500569_008758_730_2001 422
57 3300053134 Ga0500658_0009731 Ga0500658_0009731_322_1593 422
58 3300053177 Ga0500636_0022076 Ga0500636_0022076_1957_3228 422
59 3300009545 Ga0105237_10028477 Ga0105237_100284772 423
60 3300009551 Ga0105238_10270220 Ga0105238_102702202 423
61 3300010375 Ga0105239_10004763 Ga0105239_100047633 423
62 3300025914 Ga0207671_10017387 Ga0207671_100173875 423
63 3300003316 rootH1_10045618 rootH1_100456182 424
64 3300003322 rootL2_10077299 rootL2_100772991 424
65 3300013104 Ga0157370_10064467 Ga0157370_100644672 425
66 iso_pu_bacteria 2818991437 2819547359 425
67 3300003781 Ga0055536_1000006 Ga0055536_1000006298 426
68 3300003791 Ga0055530_10000679 Ga0055530_1000067920 426
69 3300025292 Ga0209676_1000039 Ga0209676_1000039393 426
70 3300025298 Ga0209050_1000033 Ga0209050_100003356 426
71 3300025911 Ga0207654_10012227 Ga0207654_100122273 427
72 3300005563 Ga0068855_100433741 Ga0068855_1004337411 428
73 3300013104 Ga0157370_10215025 Ga0157370_102150252 428
74 3300048929 Ga0496126_0031214 Ga0496126_0031214_3460_4800 428
75 3300005288 Ga0065714_10064558 Ga0065714_1006455827 429
76 3300037471 Ga0395905_0000001 Ga0395905_0000001_2020815_2022149 429
77 3300046453 Ga0495627_012790 Ga0495627_012790_33_1325 429
78 3300053156 Ga0500622_0003605 Ga0500622_0003605_1368_2657 429
79 3300003323 rootH1_10112786 rootH1_101127864 430
80 3300025242 Ga0209258_100041 Ga0209258_100041239 430
81 3300025254 Ga0209148_1000795 Ga0209148_10007956 430
82 3300026023 Ga0207677_10185447 Ga0207677_101854471 431
83 3300026121 Ga0207683_10143304 Ga0207683_101433042 431
84 3300047472 Ga0495686_0004135 Ga0495686_0004135_6901_8196 431
85 3300032005 Ga0307411_10004488 Ga0307411_100044882 433
86 3300017792 Ga0163161_10000539 Ga0163161_1000053913 434
87 3300005614 Ga0068856_100047322 Ga0068856_1000473222 435
88 3300010375 Ga0105239_10000049 Ga0105239_1000004959 435
89 3300031548 Ga0307408_100000650 Ga0307408_10000065019 435
90 3300003322 rootL2_10156444 rootL2_101564442 436
91 3300025250 Ga0209026_1005944 Ga0209026_10059443 437
92 3300050493 nmdc:mga0k408_609_c1 nmdc:mga0k408_609_c1_4735_6048 437
93 3300053153 Ga0500616_0001984 Ga0500616_0001984_9997_11334 437
94 iso_pu_bacteria 2857613821 2857614076 438
95 iso_pu_bacteria 2904419702 2904421064 438
96 iso_pu_bacteria 2929150217 2929152526 438
97 3300015261 Ga0182006_1000351 Ga0182006_100035113 439
98 iso_pu_bacteria 2833640130 2833642639 439
99 iso_pu_bacteria 2839989709 2839990869 439
100 3300005334 Ga0068869_100153944 Ga0068869_1001539442 440
101 3300005343 Ga0070687_100008176 Ga0070687_1000081763 440
102 3300005355 Ga0070671_100051665 Ga0070671_1000516653 440
103 3300005615 Ga0070702_100052255 Ga0070702_1000522552 440
104 3300013297 Ga0157378_10011457 Ga0157378_100114572 440
105 3300013308 Ga0157375_10329210 Ga0157375_103292101 440
106 3300014745 Ga0157377_10001294 Ga0157377_100012942 440
107 3300025918 Ga0207662_10018211 Ga0207662_100182112 440
108 3300025931 Ga0207644_10031880 Ga0207644_100318802 440
109 3300025942 Ga0207689_10102705 Ga0207689_101027051 440
110 3300025945 Ga0207679_10039190 Ga0207679_100391903 440
111 3300026035 Ga0207703_10059425 Ga0207703_100594253 440
112 3300026089 Ga0207648_10073836 Ga0207648_100738362 440
113 iso_pu_bacteria 2929239360 2929241041 440
114 3300005288 Ga0065714_10008428 Ga0065714_100084281 442
115 iso_pu_bacteria 2929921140 2929923064 442
116 iso_pu_bacteria 8003151029 8003152402 442
117 3300005563 Ga0068855_100031871 Ga0068855_1000318716 443
118 3300046512 Ga0495610_0000048 Ga0495610_0000048_117723_119069 443
119 iso_pu_bacteria 2585427687 2586206674 444
120 iso_pu_bacteria 2599185184 2599481924 444
121 iso_pu_bacteria 2738541284 2738761816 444
122 iso_pu_bacteria 2738541302 2738854990 444
123 iso_pu_bacteria 2739367651 2739586902 444
124 iso_pu_bacteria 2739367656 2739614877 444
125 iso_pu_bacteria 2739367663 2739646245 444
126 iso_pu_bacteria 2775506987 2776615538 444
127 iso_pu_bacteria 2842722452 2842727654 444
128 iso_pu_bacteria 2842909656 2842911141 444
129 iso_pu_bacteria 2849281842 2849283095 444
130 iso_pu_bacteria 2852627209 2852631065 444
131 iso_pu_bacteria 2857627736 2857631921 444
132 iso_pu_bacteria 2902048731 2902049587 444
133 iso_pu_bacteria 2904445276 2904447826 444
134 iso_pu_bacteria 2928078545 2928084083 444
135 iso_pu_bacteria 2928147474 2928152850 444
136 iso_pu_bacteria 2932082852 2932087434 444
137 iso_pu_bacteria 2945997725 2945997747 444
138 iso_pu_bacteria 2954016120 2954020200 444
139 3300003316 rootH1_10058613 rootH1_100586133 445
140 3300003322 rootL2_10004090 rootL2_100040902 445
141 3300003322 rootL2_10020951 rootL2_1002095110 445
142 3300003322 rootL2_10046020 rootL2_100460205 445
143 3300003323 rootH1_10094045 rootH1_100940452 445
144 3300003794 Ga0055531_10000133 Ga0055531_1000013386 445
145 3300003794 Ga0055531_10000166 Ga0055531_1000016679 445
146 3300005539 Ga0068853_100005363 Ga0068853_1000053633 445
147 3300010375 Ga0105239_10048419 Ga0105239_100484195 445
148 3300025304 Ga0209257_1000001 Ga0209257_10000011597 445
149 3300030521 Ga0307511_10007305 Ga0307511_100073055 445
150 3300046558 Ga0495633_0000049 Ga0495633_0000049_22087_23427 445
151 3300053092 Ga0500583_0074120 Ga0500583_0074120_227_1567 445
152 3300053160 Ga0500633_0010712 Ga0500633_0010712_853_2193 445
153 3300005333 Ga0070677_10069350 Ga0070677_100693501 447
154 3300005614 Ga0068856_100086670 Ga0068856_1000866703 447
155 3300014326 Ga0157380_10003097 Ga0157380_100030979 447
156 3300025261 Ga0209233_1000485 Ga0209233_100048520 447
157 2162886007 SwRhRL2b_contig_2276363 SwRhRL2b_0434.00002730 448
158 3300001990 JGI24737J22298_10000097 JGI24737J22298_1000009720 448
159 3300002067 JGI24735J21928_10000007 JGI24735J21928_1000000725 448
160 3300002772 JGI25164J39214_1001671 JGI25164J39214_10016712 448
161 3300002773 JGI25152J39213_1000054 JGI25152J39213_100005458 448
162 3300002774 JGI25150J39212_1000003 JGI25150J39212_1000003270 448
163 3300002774 JGI25150J39212_1000004 JGI25150J39212_1000004354 448
164 3300003187 JGI25151J46595_10000002 JGI25151J46595_10000002270 448
165 3300003214 JGI25165J46597_1000426 JGI25165J46597_100042635 448
166 3300003215 JGI25153J46596_10000015 JGI25153J46596_1000001581 448
167 3300003316 rootH1_10086689 rootH1_100866893 448
168 3300003323 rootH1_10050749 rootH1_100507493 448
169 3300003323 rootH1_10100346 rootH1_101003463 448
170 3300005288 Ga0065714_10002609 Ga0065714_100026092 448
171 3300005288 Ga0065714_10080447 Ga0065714_100804472 448
172 3300005288 Ga0065714_10087480 Ga0065714_100874801 448
173 3300005289 Ga0065704_10000670 Ga0065704_100006706 448
174 3300005289 Ga0065704_10074720 Ga0065704_100747205 448
175 3300005327 Ga0070658_10000008 Ga0070658_10000008307 448
176 3300005327 Ga0070658_10012179 Ga0070658_100121794 448
177 3300005329 Ga0070683_100005282 Ga0070683_1000052824 448
178 3300005436 Ga0070713_100195961 Ga0070713_1001959612 448
179 3300005563 Ga0068855_100003173 Ga0068855_10000317325 448
180 3300005563 Ga0068855_100184152 Ga0068855_1001841522 448
181 3300005578 Ga0068854_100022726 Ga0068854_1000227262 448
182 3300005614 Ga0068856_100000668 Ga0068856_10000066818 448
183 3300005616 Ga0068852_100051409 Ga0068852_1000514093 448
184 3300006195 Ga0075366_10000717 Ga0075366_1000071713 448
185 3300006881 Ga0068865_100000063 Ga0068865_10000006336 448
186 3300009093 Ga0105240_10000010 Ga0105240_10000010121 448
187 3300009093 Ga0105240_10153358 Ga0105240_101533582 448
188 3300009174 Ga0105241_10039344 Ga0105241_100393443 448
189 3300009545 Ga0105237_10000243 Ga0105237_1000024338 448
190 3300009545 Ga0105237_10001876 Ga0105237_1000187614 448
191 3300009545 Ga0105237_10002823 Ga0105237_100028232 448
192 3300009551 Ga0105238_10249914 Ga0105238_102499141 448
193 3300010375 Ga0105239_10000017 Ga0105239_10000017221 448
194 3300010375 Ga0105239_10001486 Ga0105239_100014862 448
195 3300010375 Ga0105239_10218466 Ga0105239_102184662 448
196 3300013100 Ga0157373_10000271 Ga0157373_1000027130 448
197 3300013100 Ga0157373_10000320 Ga0157373_1000032027 448
198 3300013100 Ga0157373_10098401 Ga0157373_100984012 448
199 3300013102 Ga0157371_10000025 Ga0157371_10000025134 448
200 3300013102 Ga0157371_10003580 Ga0157371_1000358011 448
201 3300013102 Ga0157371_10003607 Ga0157371_1000360712 448
202 3300013104 Ga0157370_10000383 Ga0157370_1000038329 448
203 3300013104 Ga0157370_10020417 Ga0157370_100204173 448
204 3300013105 Ga0157369_10000164 Ga0157369_1000016457 448
205 3300013297 Ga0157378_10013502 Ga0157378_100135024 448
206 3300013306 Ga0163162_10004456 Ga0163162_1000445615 448
207 3300013307 Ga0157372_10001854 Ga0157372_1000185416 448
208 3300013308 Ga0157375_10014001 Ga0157375_100140012 448
209 3300014497 Ga0182008_10000002 Ga0182008_10000002135 448
210 3300015261 Ga0182006_1000546 Ga0182006_100054614 448
211 3300015262 Ga0182007_10000005 Ga0182007_1000000555 448
212 3300015682 Ga0183373_1002 Ga0183373_1002640 448
213 3300017792 Ga0163161_10000135 Ga0163161_1000013559 448
214 3300017792 Ga0163161_10066575 Ga0163161_100665751 448
215 3300025231 Ga0207427_100204 Ga0207427_10020415 448
216 3300025233 Ga0209437_100048 Ga0209437_100048337 448
217 3300025245 Ga0207425_1000003 Ga0207425_1000003573 448
218 3300025250 Ga0209026_1000201 Ga0209026_100020121 448
219 3300025250 Ga0209026_1009348 Ga0209026_10093482 448
220 3300025258 Ga0209129_1000014 Ga0209129_1000014260 448
221 3300025261 Ga0209233_1000029 Ga0209233_100002939 448
222 3300025272 Ga0209455_1007877 Ga0209455_10078772 448
223 3300025294 Ga0209025_1000007 Ga0209025_1000007572 448
224 3300025297 Ga0209758_1000012 Ga0209758_1000012573 448
225 3300025904 Ga0207647_10030926 Ga0207647_100309262 448
226 3300025909 Ga0207705_10000035 Ga0207705_1000003549 448
227 3300025913 Ga0207695_10000019 Ga0207695_10000019331 448
228 3300025913 Ga0207695_10012032 Ga0207695_100120322 448
229 3300025913 Ga0207695_10227774 Ga0207695_102277742 448
230 3300025914 Ga0207671_10000257 Ga0207671_1000025764 448
231 3300025938 Ga0207704_10000180 Ga0207704_1000018028 448
232 3300025944 Ga0207661_10050947 Ga0207661_100509472 448
233 3300026078 Ga0207702_10000861 Ga0207702_1000086130 448
234 3300028794 Ga0307515_10007196 Ga0307515_1000719616 448
235 3300031548 Ga0307408_100000380 Ga0307408_10000038020 448
236 3300031548 Ga0307408_100001582 Ga0307408_10000158213 448
237 3300031731 Ga0307405_10000009 Ga0307405_10000009223 448
238 3300031903 Ga0307407_10000001 Ga0307407_10000001401 448
239 3300031911 Ga0307412_10000050 Ga0307412_1000005081 448
240 3300031911 Ga0307412_10006291 Ga0307412_100062916 448
241 3300032002 Ga0307416_100000026 Ga0307416_100000026152 448
242 3300032004 Ga0307414_10003733 Ga0307414_100037332 448
243 3300032004 Ga0307414_10004072 Ga0307414_100040727 448
244 3300035115 Ga0373941_0003155 Ga0373941_0003155_1561_2907 448
245 3300046471 Ga0495650_0000081 Ga0495650_0000081_172900_174246 448
246 3300046492 Ga0495585_0000036 Ga0495585_0000036_75206_76552 448
247 3300046506 Ga0495583_0012671 Ga0495583_0012671_2666_4012 448
248 3300046507 Ga0495606_0000034 Ga0495606_0000034_182342_183688 448
249 3300046507 Ga0495606_0012906 Ga0495606_0012906_565_1911 448
250 3300046507 Ga0495606_0021571 Ga0495606_0021571_2035_3381 448
251 3300046512 Ga0495610_0000501 Ga0495610_0000501_28637_29983 448
252 3300046512 Ga0495610_0003276 Ga0495610_0003276_11321_12667 448
253 3300046512 Ga0495610_0011094 Ga0495610_0011094_976_2322 448
254 3300046513 Ga0495616_0008122 Ga0495616_0008122_4406_5752 448
255 3300046529 Ga0495652_0138896 Ga0495652_0138896_191_1537 448
256 3300046558 Ga0495633_0009366 Ga0495633_0009366_432_1778 448
257 3300046558 Ga0495633_0027834 Ga0495633_0027834_231_1577 448
258 3300046660 Ga0495625_0000049 Ga0495625_0000049_116892_118238 448
259 3300046665 Ga0495661_0003026 Ga0495661_0003026_94_1440 448
260 3300046665 Ga0495661_0069981 Ga0495661_0069981_619_1965 448
261 3300046694 Ga0495649_0000014 Ga0495649_0000014_78820_80166 448
262 3300046810 Ga0495660_0001981 Ga0495660_0001981_11360_12706 448
263 3300047443 Ga0495687_000249 Ga0495687_000249_62816_64162 448
264 3300053093 Ga0500651_0000520 Ga0500651_0000520_13393_14739 448

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01882

DUF58

Protein of unknown function DUF58

232

317

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ad7-assembly1.cif.gz_A crystal structure of human complement c5 in complex with the k8 bovine knob domain peptide. 0.7719 66 172
7ad6-assembly1.cif.gz_A crystal structure of human complement c5 in complex with the k92 bovine knob domain peptide. 0.7609 66 172
7b2q-assembly1.cif.gz_B cryo-em structure of complement c4b in complex with nanobody b12 0.7597 63 170
5jpm-assembly2.cif.gz_E structure of the complex of human complement c4 with masp-2 rebuilt using imdff 0.7535 65 173
7s64-assembly1.cif.gz_A intermediate-form oocyte/egg alpha-2-macroglobulin (a2moo) tetramer 0.7444 66 173
ID Description Score Start End Superfamily
af_O69661_282_440_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.9444 304 448 3.40.50.410
af_O69661_282_440_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8531 304 448 3.40.50.410
af_Q4DEH9_91_226_2.60.370.10 Mainly Beta;Sandwich;Ctag/Cox11 (Pfam 04442);Ctag/Cox11 0.7849 63 134 2.60.370.10
af_Q8ILG6_1103_1206_2.60.40.1230 Mainly Beta;Sandwich;Immunoglobulin-like;Gamma-adaptin ear (GAE) domain 0.7798 63 168 2.60.40.1230
af_Q8IZJ3_804_933_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7794 67 173 2.60.40.10
ID Description Score Start End GO Terms
AF-A0A5D0J463-F1-model_v4 DUF58 domain-containing protein 0.983 285 448
AF-A0A7V3I746-F1-model_v4 DUF58 domain-containing protein 0.9656 237 448
AF-A0A0F6WGH8-F1-model_v4 DUF58 domain-containing protein 0.9654 233 446
AF-A0A5D0J463-F1-model_v4 DUF58 domain-containing protein 0.9599 285 448
AF-A0A0Q0AMQ4-F1-model_v4 DUF58 domain-containing protein 0.9597 244 448

Feature Viewer

pLDDT pTM Quality
81.48 0.67 Medium
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Predicted Structure (AlphaFold2)

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