F372284

General Info

Members Datasets Scaffolds Average Seq Length
263 195 526 387

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8047893842|8047896880
Length 455
Sequence FGPEDERFRAEARDWLAEHFTGPFAALKQQTGGHPGEAHGDMAVRRAWERELGTGGWIGLGWDRTDGAYGNRAATLTQQVVWAEEYARAGAPGRLGHIGENLLGPTLLAHGDSAQRTRFLPPIARGEEVWCQGYSEPDAGSDLAGLRTRAVRDPGEGTYRITGQKIWTSLAHEADWCFVLARTEEGSQRHHGLSFLLVPMDQPGRIEVRPIRQLTGTAEFNEVFFDGAVARAEHLVGGAGHGWRVAMSLLAVERGVSTLVQQIGFARELSRVVRLALETGAAEEPVLRDRLIRQWAELKAMRWNALRTLGSAQRPGPNSAPPAGDPAPRKAAPHDLPPRSADPQATGSPDPGSPDPGPRHSGPQYSGPQDPGAPSVAKLLWGGWHQRLGELAVQVRGAAAALGPARWTAGRPYELDAFQRLFLFSRADTIYGGSDEIQRTIIAERVLHLPKESRR

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
6 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
7 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
8 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
9 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
10 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
11 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
12 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
13 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
14 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
15 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
16 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
17 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
18 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
19 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
20 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
21 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
22 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
23 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
24 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
25 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
26 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
27 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
28 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
29 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
30 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
31 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
32 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
33 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
34 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
35 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
36 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
37 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
38 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
39 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
40 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
41 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
42 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
43 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
44 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
45 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
46 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
47 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
48 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
49 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
50 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
51 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
52 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
53 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
54 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
55 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
56 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
57 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
58 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
59 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
60 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
61 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
62 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
63 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
64 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
65 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
66 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
67 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
68 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
69 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
70 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
71 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
72 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
73 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
74 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
75 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
76 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
77 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
78 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
79 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
80 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
81 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
82 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
83 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
84 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
85 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
86 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
87 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
88 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
89 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
90 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
91 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
92 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
93 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
94 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
95 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
96 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
97 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
98 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
99 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
100 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
101 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
102 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
103 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
104 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
105 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
106 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
107 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
108 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
109 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
110 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
111 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
112 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
113 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
114 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
115 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
116 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
117 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
123 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
124 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
125 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
126 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
127 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
128 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
129 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
130 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
131 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
132 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
133 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
134 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
135 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
136 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
137 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
138 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
139 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
140 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
141 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
142 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
143 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
144 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
145 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
146 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
147 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
148 2643221578 Streptomyces sp. Root63 Isolate Unclassified
149 2643221647 Streptomyces sp. Root369 Isolate Unclassified
150 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
151 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
152 2643221714 Streptomyces sp. Root264 Isolate Unclassified
153 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
154 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
155 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
156 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
157 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
158 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
159 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
160 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
161 2862574272 Streptomyces sp. AcE210 Isolate Nodule
162 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
163 2867428634 Streptomyces sp. RP5T Isolate Unclassified
164 2867475112 Streptomyces sp. TM32 Isolate Unclassified
165 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
166 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
167 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
168 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
169 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
170 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
171 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
172 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
173 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
174 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
175 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
176 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
177 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
178 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
179 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
180 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
181 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
182 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
183 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
184 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
185 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
186 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
187 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
188 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
189 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
190 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
191 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
192 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
193 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
194 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
195 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.09
Metatranscriptomes 0.76
Isolates 20.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.46
Nodule 0.76
Rhizoplane 3.04
Rhizosphere 73.76
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10003616 3300003323 Bacteria 3574
2 Ga0006562J51391_1108273 3300003578 Bacteria 8604
3 Ga0006562J51391_1108275 3300003578 Bacteria 7730
4 Ga0070683_100146085 3300005329 Bacteria 2241
5 Ga0070713_100025722 3300005436 Bacteria 4607
6 Ga0075363_100067981 3300006048 Bacteria 1931
7 Ga0075370_10056597 3300006353 Bacteria 2229
8 Ga0105245_10116869 3300009098 Bacteria 2487
9 Ga0105245_10309666 3300009098 Bacteria 1552
10 Ga0207426_1008401 3300025302 Bacteria 4176
11 Ga0207696_1022403 3300025711 Bacteria 2008
12 Ga0207652_10269721 3300025921 Bacteria 1535
13 Ga0207700_10044263 3300025928 Bacteria 3276
14 Ga0209371_1007012 3300027312 Bacteria 4026
15 Ga0307517_10000838 3300028786 Bacteria 52894
16 Ga0307517_10008611 3300028786 Bacteria 14614
17 Ga0307515_10000933 3300028794 Bacteria 67151
18 Ga0307512_10044499 3300030522 Bacteria 3649
19 Ga0307513_10156137 3300031456 Bacteria 2181
20 Ga0307509_10077067 3300031507 Bacteria 3457
21 Ga0307508_10024486 3300031616 Bacteria 5477
22 Ga0307508_10024606 3300031616 Bacteria 5464
23 Ga0307508_10039200 3300031616 Bacteria 4257
24 Ga0307508_10057118 3300031616 Bacteria 3454
25 Ga0307514_10002638 3300031649 Bacteria 18324
26 Ga0307514_10018676 3300031649 Bacteria 5682
27 Ga0307516_10008421 3300031730 Bacteria 11690
28 Ga0307518_10019325 3300031838 Bacteria 4895
29 Ga0307416_100170151 3300032002 Bacteria 2027
30 Ga0307507_10006857 3300033179 Bacteria 17009
31 Ga0307507_10014960 3300033179 Bacteria 9183
32 Ga0307507_10099358 3300033179 Bacteria 2445
33 Ga0307510_10066059 3300033180 Bacteria 3656
34 Ga0307510_10070703 3300033180 Bacteria 3482
35 Ga0373936_0001884 3300035113 Bacteria 7743
36 Ga0373956_0023652 3300035119 Bacteria 2638
37 Ga0373957_0000557 3300035120 Bacteria 9469
38 Ga0373955_0005475 3300035172 Bacteria 5708
39 Ga0373942_0000417 3300035207 Bacteria 11921
40 Ga0373962_0002394 3300035242 Bacteria 4466
41 Ga0373924_0002244 3300035410 Bacteria 6486
42 Ga0373935_0004011 3300035692 Bacteria 8601
43 Ga0373933_0002462 3300035724 Bacteria 10418
44 Ga0373937_0234698 3300036401 Bacteria 1727
45 Ga0395900_0118778 3300037418 Bacteria 2713
46 Ga0395898_0002755 3300037466 Bacteria 20248
47 Ga0395898_0010768 3300037466 Bacteria 9551
48 Ga0395901_0037093 3300038443 Bacteria 5041
49 Ga0395901_0059756 3300038443 Bacteria 3966
50 Ga0395901_0165612 3300038443 Bacteria 2321
51 Ga0439436_0016212 3300041404 Bacteria 2236
52 Ga0451853_0940032 3300041512 Bacteria 3012
53 Ga0451853_3712551 3300041512 Bacteria 2706
54 Ga0439433_0003394 3300041999 Bacteria 3417
55 Ga0439433_0003732 3300041999 Bacteria 3271
56 Ga0439449_0001724 3300042007 Bacteria 8593
57 Ga0439457_000829 3300042014 Bacteria 9283
58 Ga0439457_002002 3300042014 Bacteria 5987
59 Ga0450894_000267 3300042131 Bacteria 9384
60 Ga0450899_000206 3300042135 Bacteria 6100
61 Ga0450906_000878 3300042145 Bacteria 6599
62 Ga0439458_0000030 3300042157 Bacteria 22373
63 Ga0439458_0003505 3300042157 Bacteria 3665
64 Ga0466972_0018765 3300044658 Bacteria 3457
65 Ga0466972_0029347 3300044658 Bacteria 2708
66 Ga0466965_0050084 3300044683 Bacteria 2071
67 Ga0466970_0007337 3300044765 Bacteria 5523
68 Ga0495592_0029175 3300046454 Bacteria 4176
69 Ga0495592_0066192 3300046454 Bacteria 2644
70 Ga0495603_0000859 3300046455 Bacteria 17392
71 Ga0495603_0003363 3300046455 Bacteria 9517
72 Ga0495603_0090815 3300046455 Bacteria 1786
73 Ga0495629_0008403 3300046459 Bacteria 7594
74 Ga0495629_0011380 3300046459 Bacteria 6461
75 Ga0495629_0012973 3300046459 Bacteria 6026
76 Ga0495629_0016817 3300046459 Bacteria 5249
77 Ga0495638_0026609 3300046460 Bacteria 3748
78 Ga0495641_0010569 3300046461 Bacteria 5334
79 Ga0495651_0000578 3300046462 Bacteria 28428
80 Ga0495651_0004345 3300046462 Bacteria 10848
81 Ga0495651_0009219 3300046462 Bacteria 7574
82 Ga0495653_0003318 3300046463 Bacteria 12924
83 Ga0495653_0014976 3300046463 Bacteria 6324
84 Ga0495580_0005464 3300046472 Bacteria 10504
85 Ga0495582_0008567 3300046473 Bacteria 5641
86 Ga0495605_0110283 3300046474 Bacteria 1256
87 Ga0495662_0001250 3300046476 Bacteria 12534
88 Ga0495662_0005960 3300046476 Bacteria 6089
89 Ga0495662_0012015 3300046476 Bacteria 4232
90 Ga0495664_0004549 3300046477 Bacteria 7589
91 Ga0495594_0039732 3300046499 Bacteria 2573
92 Ga0495583_0019861 3300046506 Bacteria 3496
93 Ga0495608_0004881 3300046511 Bacteria 9596
94 Ga0495608_0072919 3300046511 Bacteria 2239
95 Ga0495618_0047981 3300046514 Bacteria 2695
96 Ga0495620_0023231 3300046515 Bacteria 2969
97 Ga0495628_0001891 3300046516 Bacteria 18993
98 Ga0495628_0094194 3300046516 Bacteria 2315
99 Ga0495628_0094387 3300046516 Bacteria 2312
100 Ga0495630_0011191 3300046517 Bacteria 6493
101 Ga0495630_0118544 3300046517 Bacteria 2007
102 Ga0495632_0082781 3300046519 Bacteria 1529
103 Ga0495637_0087914 3300046520 Bacteria 1230
104 Ga0495643_0001190 3300046522 Bacteria 25345
105 Ga0495643_0004495 3300046522 Bacteria 9723
106 Ga0495666_0002050 3300046526 Bacteria 9973
107 Ga0495666_0037453 3300046526 Bacteria 2359
108 Ga0495666_0105712 3300046526 Bacteria 1324
109 Ga0495652_0021098 3300046529 Bacteria 5790
110 Ga0495652_0039478 3300046529 Bacteria 4081
111 Ga0495665_0003979 3300046531 Bacteria 7974
112 Ga0495640_0020684 3300046533 Bacteria 4840
113 Ga0495640_0030624 3300046533 Bacteria 3850
114 Ga0495586_0002518 3300046535 Bacteria 9927
115 Ga0495586_0005667 3300046535 Bacteria 6678
116 Ga0495587_0006116 3300046536 Bacteria 7856
117 Ga0495587_0094246 3300046536 Bacteria 1728
118 Ga0495667_0008498 3300046559 Bacteria 6968
119 Ga0495667_0032901 3300046559 Bacteria 3471
120 Ga0495667_0045186 3300046559 Bacteria 2916
121 Ga0495634_0084719 3300046642 Bacteria 2066
122 Ga0495611_0111133 3300046648 Bacteria 1275
123 Ga0495625_0164092 3300046660 Bacteria 1486
124 Ga0495635_0007896 3300046663 Bacteria 7433
125 Ga0495635_0011740 3300046663 Bacteria 6142
126 Ga0495661_0093817 3300046665 Bacteria 1702
127 Ga0495588_0003689 3300046674 Bacteria 6706
128 Ga0495588_0008739 3300046674 Bacteria 4654
129 Ga0495657_0013934 3300046675 Bacteria 5906
130 Ga0495657_0023494 3300046675 Bacteria 4403
131 Ga0495657_0033576 3300046675 Bacteria 3571
132 Ga0495599_0020227 3300046678 Bacteria 4145
133 Ga0495623_0005073 3300046679 Bacteria 8634
134 Ga0495646_0018267 3300046680 Bacteria 4441
135 Ga0495646_0051661 3300046680 Bacteria 2486
136 Ga0495613_0003848 3300046689 Bacteria 11231
137 Ga0495670_0002301 3300046691 Bacteria 9440
138 Ga0495671_0005958 3300046692 Bacteria 7088
139 Ga0495649_0045127 3300046694 Bacteria 2404
140 Ga0495649_0068477 3300046694 Bacteria 1904
141 Ga0495589_0012080 3300046794 Bacteria 4478
142 Ga0495589_0025009 3300046794 Bacteria 3031
143 Ga0495600_0136043 3300046809 Bacteria 1596
144 Ga0495581_0001441 3300047315 Bacteria 13208
145 Ga0495581_0007228 3300047315 Bacteria 6422
146 Ga0495581_0016793 3300047315 Bacteria 4255
147 Ga0495604_0002718 3300047317 Bacteria 14184
148 Ga0495604_0022511 3300047317 Bacteria 5031
149 Ga0495604_0076863 3300047317 Bacteria 2510
150 Ga0495604_0150435 3300047317 Bacteria 1655
151 Ga0495636_0002571 3300047318 Bacteria 6974
152 Ga0495674_0058939 3300047319 Bacteria 3354
153 Ga0495674_0159373 3300047319 Bacteria 1888
154 Ga0495676_0002689 3300047321 Bacteria 15928
155 Ga0495676_0231055 3300047321 Bacteria 1270
156 Ga0495680_0014811 3300047322 Bacteria 6742
157 Ga0495680_0032892 3300047322 Bacteria 4204
158 Ga0495680_0239255 3300047322 Bacteria 1290
159 Ga0495683_0060327 3300047323 Bacteria 1880
160 Ga0495687_017861 3300047443 Bacteria 3522
161 Ga0495687_032199 3300047443 Bacteria 2396
162 Ga0495687_057254 3300047443 Bacteria 1622
163 Ga0495675_0003311 3300047444 Bacteria 9689
164 Ga0495675_0033042 3300047444 Bacteria 3301
165 Ga0495685_001229 3300047447 Bacteria 7857
166 Ga0495685_017473 3300047447 Bacteria 2457
167 Ga0495681_0010124 3300047470 Bacteria 5734
168 Ga0495684_0109446 3300047471 Bacteria 2086
169 Ga0495593_0006079 3300047673 Bacteria 7101
170 Ga0495593_0007566 3300047673 Bacteria 6346
171 Ga0495593_0103851 3300047673 Bacteria 1455
172 Ga0495602_0057684 3300048088 Bacteria 3404
173 Ga0495614_0006259 3300048089 Bacteria 5346
174 Ga0495614_0023582 3300048089 Bacteria 2656
175 Ga0495614_0024703 3300048089 Bacteria 2593
176 Ga0496100_0012524 3300048903 Bacteria 4865
177 Ga0496101_0006303 3300048904 Bacteria 7637
178 Ga0496104_0007353 3300048907 Bacteria 9725
179 Ga0496105_0326899 3300048908 Bacteria 1228
180 Ga0496106_0225034 3300048909 Bacteria 1496
181 Ga0496114_0061749 3300048917 Bacteria 3135
182 Ga0496115_0007992 3300048918 Bacteria 7810
183 Ga0495678_055259 3300049459 Bacteria 1516
184 Ga0501034_0015459 3300049571 Bacteria 7842
185 Ga0501043_0034779 3300049579 Bacteria 3963
186 Ga0501047_0006843 3300049581 Bacteria 10712
187 Ga0501070_0015081 3300049586 Bacteria 6504
188 Ga0501083_0152534 3300049744 Bacteria 1513
189 Ga0501044_0014284 3300049823 Bacteria 8574
190 nmdc:mga0qj67_22909_c1 3300050509 Bacteria 4799
191 Ga0495601_0005483 3300053077 Bacteria 7394
192 Ga0495601_0015959 3300053077 Bacteria 4545
193 Ga0495612_0013512 3300053078 Bacteria 3288
194 Ga0495595_0007217 3300053084 Bacteria 4542
195 Ga0495619_0003388 3300053085 Bacteria 10302
196 Ga0495619_0017708 3300053085 Bacteria 4514
197 Ga0500578_0013999 3300053086 Bacteria 5163
198 Ga0500654_042997 3300053099 Bacteria 2537
199 Ga0500660_015365 3300053100 Bacteria 4114
200 Ga0500569_001167 3300053109 Bacteria 4856
201 Ga0500628_001596 3300053129 Bacteria 3854
202 Ga0500652_000538 3300053131 Bacteria 13329
203 Ga0500658_0000368 3300053134 Bacteria 19898
204 Ga0500561_0000370 3300053137 Bacteria 7418
205 Ga0500588_0039050 3300053146 Bacteria 1419
206 Ga0500600_0004002 3300053149 Bacteria 8587
207 Ga0500616_0003151 3300053153 Bacteria 12870
208 Ga0500634_0002683 3300053161 Bacteria 7599
209 Ga0500656_000172 3300053732 Bacteria 4186
210 Ga0500587_002136 3300053739 Bacteria 2820
211 8047896880 8047893842 Bacteria 11723082
212 2585308766 2582581313 Bacteria 10042643
213 2585313461 2582581314 Bacteria 11452267
214 2616695100 2616644814 Bacteria 11555299
215 2616902115 2616644941 Bacteria 8510691
216 2643902686 2643221578 Bacteria 9213798
217 2644262249 2643221647 Bacteria 10741251
218 2644404806 2643221673 Bacteria 9196637
219 2644437138 2643221678 Bacteria 9540101
220 2644628877 2643221714 Bacteria 9015452
221 2785343341 2784746763 Bacteria 9783172
222 2785369474 2784746768 Bacteria 10036182
223 2786670580 2786546132 Bacteria 10419719
224 2808842034 2808606359 Bacteria 9866990
225 2811849004 2808606982 Bacteria 7791042
226 2812358134 2811994879 Bacteria 9313447
227 2852636704 2852635781 Bacteria 8251373
228 2862181855 2862178590 Bacteria 8583590
229 2862579278 2862574272 Bacteria 10567477
230 2863404641 2863404153 Bacteria 9672205
231 2867428885 2867428634 Bacteria 9590268
232 2867480574 2867475112 Bacteria 6909112
233 2873155756 2873151551 Bacteria 8625867
234 2877681135 2877676314 Bacteria 9512378
235 2912719986 2912715099 Bacteria 9460473
236 2919469540 2919468124 Bacteria 9133025
237 2935393875 2935390628 Bacteria 7043367
238 2946048782 2946045630 Bacteria 8527308
239 2946067707 2946064051 Bacteria 8957905
240 2946075889 2946072368 Bacteria 8999607
241 2954386268 2954380949 Bacteria 10050426
242 2954676900 2954673503 Bacteria 9685905
243 2954687258 2954682443 Bacteria 9862841
244 2954696905 2954691527 Bacteria 10720516
245 2954705230 2954701450 Bacteria 10834262
246 2954716276 2954711539 Bacteria 10867210
247 2954726218 2954721474 Bacteria 10456478
248 2954735592 2954731030 Bacteria 10243860
249 2954745143 2954740390 Bacteria 10229294
250 2954754448 2954749733 Bacteria 10366972
251 2954764117 2954759201 Bacteria 9358192
252 2990066455 2990059506 Bacteria 9321252
253 2997458302 2997451912 Bacteria 8492419
254 2997601429 2997600082 Bacteria 9896405
255 3006492722 3006486233 Bacteria 8157040
256 8008567333 8008558824 Bacteria 10610750
257 8025479004 8025478263 Bacteria 8209203
258 8048362070 8048356638 Bacteria 11044339
259 8048373865 8048369669 Bacteria 11666822
260 8048384363 8048379754 Bacteria 11877923
261 8048412780 8048406513 Bacteria 8936924
262 8056672863 8056667051 Bacteria 6953971
263 8056831725 8056829672 Bacteria 9045328
264 rootH1_10003616
265 Ga0006562J51391_1108273
266 Ga0006562J51391_1108275
267 Ga0070683_100146085
268 Ga0070713_100025722
269 Ga0075363_100067981
270 Ga0075370_10056597
271 Ga0105245_10116869
272 Ga0105245_10309666
273 Ga0207426_1008401
274 Ga0207696_1022403
275 Ga0207652_10269721
276 Ga0207700_10044263
277 Ga0209371_1007012
278 Ga0307517_10000838
279 Ga0307517_10008611
280 Ga0307515_10000933
281 Ga0307512_10044499
282 Ga0307513_10156137
283 Ga0307509_10077067
284 Ga0307508_10024486
285 Ga0307508_10024606
286 Ga0307508_10039200
287 Ga0307508_10057118
288 Ga0307514_10002638
289 Ga0307514_10018676
290 Ga0307516_10008421
291 Ga0307518_10019325
292 Ga0307416_100170151
293 Ga0307507_10006857
294 Ga0307507_10014960
295 Ga0307507_10099358
296 Ga0307510_10066059
297 Ga0307510_10070703
298 Ga0373936_0001884
299 Ga0373956_0023652
300 Ga0373957_0000557
301 Ga0373955_0005475
302 Ga0373942_0000417
303 Ga0373962_0002394
304 Ga0373924_0002244
305 Ga0373935_0004011
306 Ga0373933_0002462
307 Ga0373937_0234698
308 Ga0395900_0118778
309 Ga0395898_0002755
310 Ga0395898_0010768
311 Ga0395901_0037093
312 Ga0395901_0059756
313 Ga0395901_0165612
314 Ga0439436_0016212
315 Ga0451853_0940032
316 Ga0451853_3712551
317 Ga0439433_0003394
318 Ga0439433_0003732
319 Ga0439449_0001724
320 Ga0439457_000829
321 Ga0439457_002002
322 Ga0450894_000267
323 Ga0450899_000206
324 Ga0450906_000878
325 Ga0439458_0000030
326 Ga0439458_0003505
327 Ga0466972_0018765
328 Ga0466972_0029347
329 Ga0466965_0050084
330 Ga0466970_0007337
331 Ga0495592_0029175
332 Ga0495592_0066192
333 Ga0495603_0000859
334 Ga0495603_0003363
335 Ga0495603_0090815
336 Ga0495629_0008403
337 Ga0495629_0011380
338 Ga0495629_0012973
339 Ga0495629_0016817
340 Ga0495638_0026609
341 Ga0495641_0010569
342 Ga0495651_0000578
343 Ga0495651_0004345
344 Ga0495651_0009219
345 Ga0495653_0003318
346 Ga0495653_0014976
347 Ga0495580_0005464
348 Ga0495582_0008567
349 Ga0495605_0110283
350 Ga0495662_0001250
351 Ga0495662_0005960
352 Ga0495662_0012015
353 Ga0495664_0004549
354 Ga0495594_0039732
355 Ga0495583_0019861
356 Ga0495608_0004881
357 Ga0495608_0072919
358 Ga0495618_0047981
359 Ga0495620_0023231
360 Ga0495628_0001891
361 Ga0495628_0094194
362 Ga0495628_0094387
363 Ga0495630_0011191
364 Ga0495630_0118544
365 Ga0495632_0082781
366 Ga0495637_0087914
367 Ga0495643_0001190
368 Ga0495643_0004495
369 Ga0495666_0002050
370 Ga0495666_0037453
371 Ga0495666_0105712
372 Ga0495652_0021098
373 Ga0495652_0039478
374 Ga0495665_0003979
375 Ga0495640_0020684
376 Ga0495640_0030624
377 Ga0495586_0002518
378 Ga0495586_0005667
379 Ga0495587_0006116
380 Ga0495587_0094246
381 Ga0495667_0008498
382 Ga0495667_0032901
383 Ga0495667_0045186
384 Ga0495634_0084719
385 Ga0495611_0111133
386 Ga0495625_0164092
387 Ga0495635_0007896
388 Ga0495635_0011740
389 Ga0495661_0093817
390 Ga0495588_0003689
391 Ga0495588_0008739
392 Ga0495657_0013934
393 Ga0495657_0023494
394 Ga0495657_0033576
395 Ga0495599_0020227
396 Ga0495623_0005073
397 Ga0495646_0018267
398 Ga0495646_0051661
399 Ga0495613_0003848
400 Ga0495670_0002301
401 Ga0495671_0005958
402 Ga0495649_0045127
403 Ga0495649_0068477
404 Ga0495589_0012080
405 Ga0495589_0025009
406 Ga0495600_0136043
407 Ga0495581_0001441
408 Ga0495581_0007228
409 Ga0495581_0016793
410 Ga0495604_0002718
411 Ga0495604_0022511
412 Ga0495604_0076863
413 Ga0495604_0150435
414 Ga0495636_0002571
415 Ga0495674_0058939
416 Ga0495674_0159373
417 Ga0495676_0002689
418 Ga0495676_0231055
419 Ga0495680_0014811
420 Ga0495680_0032892
421 Ga0495680_0239255
422 Ga0495683_0060327
423 Ga0495687_017861
424 Ga0495687_032199
425 Ga0495687_057254
426 Ga0495675_0003311
427 Ga0495675_0033042
428 Ga0495685_001229
429 Ga0495685_017473
430 Ga0495681_0010124
431 Ga0495684_0109446
432 Ga0495593_0006079
433 Ga0495593_0007566
434 Ga0495593_0103851
435 Ga0495602_0057684
436 Ga0495614_0006259
437 Ga0495614_0023582
438 Ga0495614_0024703
439 Ga0496100_0012524
440 Ga0496101_0006303
441 Ga0496104_0007353
442 Ga0496105_0326899
443 Ga0496106_0225034
444 Ga0496114_0061749
445 Ga0496115_0007992
446 Ga0495678_055259
447 Ga0501034_0015459
448 Ga0501043_0034779
449 Ga0501047_0006843
450 Ga0501070_0015081
451 Ga0501083_0152534
452 Ga0501044_0014284
453 nmdc:mga0qj67_22909_c1
454 Ga0495601_0005483
455 Ga0495601_0015959
456 Ga0495612_0013512
457 Ga0495595_0007217
458 Ga0495619_0003388
459 Ga0495619_0017708
460 Ga0500578_0013999
461 Ga0500654_042997
462 Ga0500660_015365
463 Ga0500569_001167
464 Ga0500628_001596
465 Ga0500652_000538
466 Ga0500658_0000368
467 Ga0500561_0000370
468 Ga0500588_0039050
469 Ga0500600_0004002
470 Ga0500616_0003151
471 Ga0500634_0002683
472 Ga0500656_000172
473 Ga0500587_002136
474 8047896880
475 2585308766
476 2585313461
477 2616695100
478 2616902115
479 2643902686
480 2644262249
481 2644404806
482 2644437138
483 2644628877
484 2785343341
485 2785369474
486 2786670580
487 2808842034
488 2811849004
489 2812358134
490 2852636704
491 2862181855
492 2862579278
493 2863404641
494 2867428885
495 2867480574
496 2873155756
497 2877681135
498 2912719986
499 2919469540
500 2935393875
501 2946048782
502 2946067707
503 2946075889
504 2954386268
505 2954676900
506 2954687258
507 2954696905
508 2954705230
509 2954716276
510 2954726218
511 2954735592
512 2954745143
513 2954754448
514 2954764117
515 2990066455
516 2997458302
517 2997601429
518 3006492722
519 8008567333
520 8025479004
521 8048362070
522 8048373865
523 8048384363
524 8048412780
525 8056672863
526 8056831725

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

363

447

0.88

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

131

228

0.88

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

240

324

0.87

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

2

127

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6wy9-assembly1.cif.gz_A-2 tcur3481-tcur3483 steroid acad g363a variant 0.8236 7 376
6wy8-assembly1.cif.gz_D tcur3481-tcur3483 steroid acad 0.8168 1 376
6wy8-assembly1.cif.gz_D tcur3481-tcur3483 steroid acad 0.8051 1 376
6wy9-assembly1.cif.gz_A-2 tcur3481-tcur3483 steroid acad g363a variant 0.803 7 376
6cy8-assembly1.cif.gz_B crystal structure of fad-dependent dehydrogenase 0.8027 1 375
ID Description Score Start End Superfamily
af_P96855_462_572_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9329 114 225 2.40.110.10
af_P96855_462_572_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9249 114 225 2.40.110.10
af_I6YGH7_1_121_1.10.540.10 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9141 1 111 1.10.540.10
af_I6Y3V5_2_119_1.10.540.10 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.8814 9 107 1.10.540.10
5iduB02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.8758 114 229 2.40.110.10
ID Description Score Start End GO Terms
AF-A0A5D4H235-F1-model_v4 Acyl-CoA dehydrogenase 0.9569 27 313 GO:0005886
GO:0016627
GO:0050660
AF-A0A3R9WBK0-F1-model_v4 deleted 0.9412 1 377
AF-A0A4Q9HIC5-F1-model_v4 Acyl-CoA dehydrogenase 0.9396 69 377 GO:0005886
GO:0016627
GO:0050660
AF-A0A6G3CXE1-F1-model_v4 Acyl-CoA dehydrogenase 0.9384 11 377 GO:0005886
GO:0016627
GO:0050660
AF-E2Q105-F1-model_v4 Putative acyl-CoA dehydrogenase 0.9366 4 381 GO:0005886
GO:0016627
GO:0050660

Map