F372261

General Info

Members Datasets Scaffolds Average Seq Length
263 246 115 596

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2889049205|2889055380
Length 671
Sequence INPTNAVNAANATSAANVEWPGKLTAAWLREQYLGELLTPAAVVHEIFQRSKRDEGMNIWITPPSPERIRPYLERLSDMDPEQFPLWGIPFAIKDNIDWDGAPTTAACPDFAYTPEESAVVVQRLIAAGAIPLGKTNLDQFATGLVGTRSPYGETHNALRPELISGGSSSGSAVAVARGQAVFALGTDTAGSGRVPAALNGLVGYKPSLGAWPTKGVVPACASLDCVTVFAHDLADALAVDAVARGAEAADPWSRSLPVPVASRLPAAVCLPEEAPAFYGPYAAQYRAAWEAAAAQVASLGIPVIPIAMDVFAEAAAILYGGPWVAERWAELGEFVNGHPGSAFPVTEQVLRTGESPAYTAASVFQAMHKLQQYKLQAGKLLKDAVLMLPTCGGTWTREDVRRDPIAANSDMGKYTNHCNLLDLCAVAVQAGEAAEDMPFGVTFFAAAENESLICAAAAAFAAARGDSGIGTIGVAGASGRDSEDEDEVAAATGNQPAATPGMQSEASLAITQELQLSKPAEASPPGTTHSTEAVTNSPEQAAKAATTLVAVCGLHMRGFPLEKQMLGCGAVFVRETESAPKYRLVKLPTVPAKPGMIKQEQGGAAITLEVWEMPLAAFGGFVAGIPAPLGIGKVELSDGSEVPGFTCEAYAAAISEDITQTGSWRKAVLM

Samples

Sample ID Description Type Environment
1 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
2 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
3 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
4 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
5 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
6 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
7 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
8 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
9 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
10 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
11 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
12 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
13 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
14 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
15 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
16 2643221731 Bacillus sp. Root147 Isolate Unclassified
17 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
18 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
19 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
20 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
21 2791355260 Rhizobium sp. L9 Isolate Nodule
22 2791355264 Rhizobium sp. S9 Isolate Nodule
23 2791355266 Rhizobium sp. L43 Isolate Nodule
24 2818991459 Paenibacillus sp. 597 Isolate Unclassified
25 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
26 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
27 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
28 2838680041 Rhizobium leguminosarum SEMIA 415 Isolate Nodule
29 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
30 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
31 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
32 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
33 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
34 2842237096 Rhizobium leguminosarum SEMIA 482 Isolate Nodule
35 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
36 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
37 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
38 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
39 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
40 2856349417 Mesorhizobium sp. M4A.F.Ca.ET.090.04.2.1 Isolate Nodule
41 2856356410 Mesorhizobium sp. M4B.F.Ca.ET.088.02.2.1 Isolate Nodule
42 2856364286 Mesorhizobium sp. M00.F.Ca.ET.151.01.1.1 Isolate Nodule
43 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
44 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
45 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
46 2857472729 Cohnella sp. R-74144 Isolate Unclassified
47 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
48 2869285874 Mesorhizobium sp. M2D.F.Ca.ET.147.01.1.1 Isolate Nodule
49 2871429161 Mesorhizobium sp. M2D.F.Ca.ET.225.01.1.1 Isolate Nodule
50 2871488783 Mesorhizobium sp. M4B.F.Ca.ET.203.01.1.1 Isolate Nodule
51 2871495908 Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 Isolate Nodule
52 2874146452 Mesorhizobium sp. M2D.F.Ca.ET.160.01.1.1 Isolate Nodule
53 2874155637 Mesorhizobium sp. M2D.F.Ca.ET.224.01.1.1 Isolate Nodule
54 2876392853 Mesorhizobium sp. M1D.F.Ca.ET.234.01.1.1 Isolate Nodule
55 2876413966 Mesorhizobium sp. M2D.F.Ca.ET.233.01.1.1 Isolate Nodule
56 2878745973 Mesorhizobium sp. M2D.F.Ca.ET.226.01.1.1 Isolate Nodule
57 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
58 2878760144 Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 Isolate Nodule
59 2878767105 Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 Isolate Nodule
60 2881147464 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 Isolate Nodule
61 2881155292 Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 Isolate Nodule
62 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
63 2881845957 Mesorhizobium sp. M4B.F.Ca.ET.019.03.1.1 Isolate Nodule
64 2881861095 Mesorhizobium sp. M4B.F.Ca.ET.049.02.1.2 Isolate Nodule
65 2882912400 Mesorhizobium sp. M4B.F.Ca.ET.013.02.1.1 Isolate Nodule
66 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
67 2885318864 Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 Isolate Nodule
68 2885342637 Mesorhizobium sp. M4A.F.Ca.ET.050.02.1.1 Isolate Nodule
69 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
70 2888350351 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 Isolate Nodule
71 2889010040 Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 Isolate Nodule
72 2889016732 Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 Isolate Nodule
73 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
74 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
75 2903540706 Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 Isolate Nodule
76 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
77 2904659560 Mesorhizobium sp. M1D.F.Ca.ET.184.01.1.1 Isolate Nodule
78 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
79 2906308376 Mesorhizobium sp. M2D.F.Ca.ET.185.01.1.1 Isolate Nodule
80 2906321335 Mesorhizobium sp. M2D.F.Ca.ET.206.01.1.1 Isolate Nodule
81 2906354277 Mesorhizobium sp. M2A.F.Ca.ET.040.01.1.1 Isolate Nodule
82 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
83 2922185730 Mesorhizobium sp. M2A.F.Ca.ET.037.01.1.1 Isolate Nodule
84 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
85 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
86 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
87 2929004312 Priestia megaterium 1104 Isolate Unclassified
88 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
89 2937813078 Mesorhizobium sp. M2D.F.Ca.ET.223.01.1.1 Isolate Nodule
90 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
91 2937994558 Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 Isolate Nodule
92 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
93 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
94 2958100919 Mesorhizobium sp. M2A.F.Ca.ET.015.02.1.1 Isolate Nodule
95 2958130278 Mesorhizobium sp. M2D.F.Ca.ET.148.01.1.1 Isolate Nodule
96 2958165035 Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 Isolate Nodule
97 2958179912 Mesorhizobium sp. M2D.F.Ca.ET.171.01.1.1 Isolate Nodule
98 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
99 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
100 2961077736 Mesorhizobium sp. M2D.F.Ca.ET.178.01.1.1 Isolate Nodule
101 2961114664 Mesorhizobium sp. M1D.F.Ca.ET.231.01.1.1 Isolate Nodule
102 2961127735 Mesorhizobium sp. M4A.F.Ca.ET.029.04.2.1 Isolate Nodule
103 2961163497 Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 Isolate Nodule
104 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
105 2965018300 Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 Isolate Nodule
106 2967996073 Mesorhizobium sp. M4B.F.Ca.ET.169.01.1.1 Isolate Nodule
107 2968003550 Mesorhizobium sp. M4B.F.Ca.ET.215.01.1.1 Isolate Nodule
108 2968110612 Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 Isolate Nodule
109 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
110 2968171901 Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 Isolate Nodule
111 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
112 2970554993 Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 Isolate Nodule
113 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
114 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
115 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
116 2977828996 Mesorhizobium sp. M4B.F.Ca.ET.089.01.1.1 Isolate Nodule
117 2977843712 Mesorhizobium sp. M2D.F.Ca.ET.140.01.1.1 Isolate Nodule
118 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
119 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
120 2977971508 Mesorhizobium sp. M2A.F.Ca.ET.039.01.1.1 Isolate Nodule
121 2979710463 Mesorhizobium sp. M2A.F.Ca.ET.017.03.2.1 Isolate Nodule
122 2979742915 Mesorhizobium sp. M2A.F.Ca.ET.046.02.1.1 Isolate Nodule
123 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
124 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
125 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
126 2987652177 Mesorhizobium sp. M2A.F.Ca.ET.042.01.1.1 Isolate Nodule
127 2987659509 Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 Isolate Nodule
128 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
129 2996386984 Mesorhizobium sp. M7A.F.Ca.MR.245.00.0.0 Isolate Nodule
130 3004188549 Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 Isolate Nodule
131 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule
132 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
133 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
134 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
135 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
136 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
137 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
138 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
139 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
140 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
141 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
142 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
143 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
144 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
145 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
146 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
147 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
148 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
149 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
150 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
151 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
152 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
153 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
154 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
155 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
156 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
157 3300009763 Root nodule microbial communities of legume samples collected from Mexico - Siratro Mexico nodule mix Metagenome Nodule
158 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
159 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
160 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
161 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
162 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
163 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
164 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
165 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
166 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
167 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
168 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
169 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
170 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
171 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
172 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
173 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
174 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
175 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
176 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
177 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
178 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
179 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
180 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
181 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
182 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
183 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
184 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
185 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
186 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
187 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
188 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
189 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
190 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
191 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
192 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
193 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
194 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
195 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
196 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
197 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
198 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
199 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
200 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
201 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
202 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
203 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
204 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
205 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
206 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
207 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
208 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
209 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
210 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
211 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
212 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
213 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
214 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
215 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
216 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
217 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
218 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
219 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
220 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
221 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
222 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
223 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
224 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
225 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
226 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
227 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
228 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
229 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
230 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
231 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
232 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
233 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
234 646564506 Arcobacter nitrofigilis DSM 7299 Isolate Unclassified
235 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
236 8002745576 Marinomonas spartinae USM8 Isolate Rhizosphere
237 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
238 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
239 8004387939 Mesorhizobium sp. M2D.F.Ca.ET.232.01.1.1 Isolate Nodule
240 8004640170 Mesorhizobium sp. GbtcB19 Isolate Unclassified
241 8004714634 Mesorhizobium sp. M2D.F.Ca.ET.153.01.1.1 Isolate Nodule
242 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
243 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
244 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
245 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
246 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 43.73
Metatranscriptomes 0
Isolates 56.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.13
Nodule 37.64
Rhizoplane 6.84
Rhizosphere 23.57
Stem 0
Stem Tuber 0
Unclassified 22.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000017 3300002704 Bacteria 159274
2 JGI25156J39149_1000034 3300002705 Bacteria 114036
3 JGI25154J39366_1000034 3300002738 Bacteria 176764
4 JGI25157J39369_1000092 3300002741 Bacteria 76674
5 JGI25151J46595_10001301 3300003187 Bacteria 17491
6 rootH1_10002180 3300003316 Bacteria 29373
7 rootL2_10098158 3300003322 Bacteria 9896
8 rootH1_10127862 3300003323 Bacteria 5080
9 JGI25160J50197_1000095 3300003354 Bacteria 88326
10 JGI25161J50226_1000071 3300003374 Bacteria 88326
11 Ga0055532_1000123 3300003758 Bacteria 78526
12 Ga0055528_1005681 3300003790 Bacteria 5753
13 Ga0055543_1000250 3300004625 Bacteria 40740
14 Ga0065165_1000408 3300005262 Bacteria 68789
15 Ga0068853_100001192 3300005539 Bacteria 18528
16 Ga0068858_100000007 3300005842 Bacteria 247001
17 Ga0081540_1000459 3300005983 Bacteria 40435
18 Ga0075365_10004903 3300006038 Bacteria 7153
19 Ga0075367_10030517 3300006178 Bacteria 3091
20 Ga0075434_100015092 3300006871 Bacteria 7398
21 Ga0111539_10027318 3300009094 Bacteria 6969
22 Ga0114129_10104786 3300009147 Bacteria 3909
23 Ga0105243_10034192 3300009148 Bacteria 3933
24 Ga0105243_10057100 3300009148 Bacteria 3107
25 Ga0105248_10005402 3300009177 Bacteria 14046
26 Ga0123340_1001765 3300009763 Bacteria 18561
27 Ga0123341_1001251 3300009765 Bacteria 18561
28 Ga0157374_10112537 3300013296 Bacteria 2619
29 Ga0163163_10008486 3300014325 Bacteria 9132
30 Ga0157379_10000002 3300014968 Bacteria 179727
31 Ga0209435_100023 3300025206 Bacteria 201972
32 Ga0209566_100285 3300025225 Bacteria 46582
33 Ga0209147_100076 3300025229 Bacteria 207570
34 Ga0209646_1000080 3300025246 Bacteria 201975
35 Ga0209026_1000002 3300025250 Bacteria 1136158
36 Ga0209026_1000076 3300025250 Bacteria 201975
37 Ga0209759_1000059 3300025256 Bacteria 201975
38 Ga0209759_1001699 3300025256 Bacteria 11419
39 Ga0209673_1002909 3300025273 Bacteria 10814
40 Ga0209130_1000180 3300025284 Bacteria 89520
41 Ga0209025_1002750 3300025294 Bacteria 17798
42 Ga0207426_1000017 3300025302 Bacteria 577913
43 Ga0207696_1004595 3300025711 Bacteria 5911
44 Ga0207713_1024579 3300025735 Bacteria 2806
45 Ga0207709_10078892 3300025935 Bacteria 2115
46 Ga0207711_10000385 3300025941 Bacteria 46717
47 Ga0207703_10000001 3300026035 Bacteria 822925
48 Ga0207639_10001095 3300026041 Bacteria 18432
49 Ga0207674_10004839 3300026116 Bacteria 16124
50 Ga0207675_100018370 3300026118 Bacteria 6520
51 Ga0207675_100062890 3300026118 Bacteria 3467
52 Ga0265340_10032639 3300031247 Bacteria 2598
53 Ga0265339_10051704 3300031249 Bacteria 2241
54 Ga0265327_10000008 3300031251 Bacteria 658870
55 Ga0307408_100016932 3300031548 Bacteria 4873
56 Ga0265313_10009201 3300031595 Bacteria 6441
57 Ga0307508_10126446 3300031616 Bacteria 2159
58 Ga0395905_0042751 3300037471 Bacteria 4251
59 Ga0400484_42955 3300038725 Bacteria 12638
60 Ga0400488_47694 3300038741 Bacteria 4693
61 Ga0400483_002665 3300039062 Bacteria 3353
62 Ga0400483_038753 3300039062 Bacteria 2843
63 Ga0400483_062827 3300039062 Bacteria 13017
64 Ga0400483_209211 3300039062 Bacteria 11611
65 Ga0400487_24562 3300039110 Bacteria 6760
66 Ga0400487_34995 3300039110 Bacteria 2589
67 Ga0466972_0004195 3300044658 Bacteria 7198
68 Ga0451576_0001174 3300045051 Bacteria 46946
69 Ga0495627_021744 3300046453 Bacteria 2121
70 Ga0495590_0023606 3300046457 Bacteria 2170
71 Ga0495650_0031673 3300046471 Bacteria 2376
72 Ga0495585_0056348 3300046492 Bacteria 2171
73 Ga0495583_0004969 3300046506 Bacteria 9228
74 Ga0495643_0043334 3300046522 Bacteria 2449
75 Ga0495654_0000114 3300046530 Bacteria 91751
76 Ga0495597_0005624 3300046542 Bacteria 6606
77 Ga0495602_0065164 3300048088 Bacteria 3146
78 Ga0496100_0000291 3300048903 Bacteria 25201
79 Ga0496101_0005631 3300048904 Bacteria 7989
80 Ga0496102_0002210 3300048905 Bacteria 16711
81 Ga0496103_0003181 3300048906 Bacteria 10089
82 Ga0496104_0000355 3300048907 Bacteria 40904
83 Ga0496104_0001710 3300048907 Bacteria 18952
84 Ga0496104_0037016 3300048907 Bacteria 4563
85 Ga0496105_0000827 3300048908 Bacteria 21031
86 Ga0496106_0001056 3300048909 Bacteria 20286
87 Ga0496106_0008374 3300048909 Bacteria 7653
88 Ga0496107_0000750 3300048910 Bacteria 18628
89 Ga0496108_0000646 3300048911 Bacteria 27125
90 Ga0496108_0009729 3300048911 Bacteria 7791
91 Ga0496109_0006307 3300048912 Bacteria 9983
92 Ga0496111_0004049 3300048914 Bacteria 9208
93 Ga0496112_0002110 3300048915 Bacteria 15779
94 Ga0496113_0026503 3300048916 Bacteria 4144
95 Ga0496117_0069375 3300048920 Bacteria 2374
96 Ga0496119_0007760 3300048922 Bacteria 9571
97 Ga0496120_0001664 3300048923 Bacteria 25619
98 Ga0496122_0003541 3300048925 Bacteria 20419
99 Ga0496123_0062727 3300048926 Bacteria 2379
100 Ga0496125_0028544 3300048928 Bacteria 5037
101 Ga0496126_0018006 3300048929 Bacteria 7022
102 Ga0501067_0003213 3300049583 Bacteria 9004
103 Ga0501083_0077129 3300049744 Bacteria 2211
104 nmdc:mga0a205_26724_c1 3300050515 Bacteria 5507
105 Ga0495655_0000475 3300053083 Bacteria 6734
106 Ga0500651_0082680 3300053093 Bacteria 1987
107 Ga0500566_0021471 3300053094 Bacteria 3794
108 Ga0500618_000031 3300053125 Bacteria 129550
109 Ga0500618_000296 3300053125 Bacteria 37750
110 Ga0500618_012410 3300053125 Bacteria 2232
111 Ga0500642_0001844 3300053130 Bacteria 6115
112 Ga0500655_000017 3300053133 Bacteria 46539
113 Ga0500620_000120 3300053155 Bacteria 15599
114 Ga0500570_015269 3300053724 Bacteria 4308
115 Ga0501084_0032108 3300054114 Bacteria 4391

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2977971508 2977977242 500
2 iso_pu_bacteria 2977828996 2977831964 550
3 3300005842 Ga0068858_100000007 Ga0068858_100000007244 558
4 3300009177 Ga0105248_10005402 Ga0105248_100054025 558
5 3300014325 Ga0163163_10008486 Ga0163163_100084867 558
6 3300014968 Ga0157379_10000002 Ga0157379_10000002183 558
7 3300025941 Ga0207711_10000385 Ga0207711_1000038537 558
8 3300026035 Ga0207703_10000001 Ga0207703_100000013 558
9 3300048088 Ga0495602_0065164 Ga0495602_0065164_718_2406 558
10 3300046471 Ga0495650_0031673 Ga0495650_0031673_538_2349 560
11 iso_pu_bacteria 2751185905 2753812962 560
12 iso_pu_bacteria 2885526491 2885532091 562
13 3300046542 Ga0495597_0005624 Ga0495597_0005624_2874_4655 563
14 3300053093 Ga0500651_0082680 Ga0500651_0082680_20_1801 563
15 3300053094 Ga0500566_0021471 Ga0500566_0021471_930_2711 563
16 3300053130 Ga0500642_0001844 Ga0500642_0001844_3461_5242 563
17 3300053724 Ga0500570_015269 Ga0500570_015269_1256_3037 563
18 iso_pu_bacteria 2857604169 2857606876 563
19 iso_pu_bacteria 2524023129 2524191784 564
20 iso_pu_bacteria 2821111986 2821112251 564
21 iso_pu_bacteria 2821111986 2821112875 564
22 iso_pu_bacteria 2904113452 2904118996 564
23 iso_pu_bacteria 2929004312 2929005171 564
24 iso_pu_bacteria 2960375949 2960376787 564
25 iso_pu_bacteria 8022893055 8022895932 564
26 iso_pu_bacteria 8022914991 8022918859 564
27 3300003187 JGI25151J46595_10001301 JGI25151J46595_100013018 565
28 3300003316 rootH1_10002180 rootH1_1000218010 565
29 3300003322 rootL2_10098158 rootL2_100981582 565
30 3300003323 rootH1_10127862 rootH1_101278622 565
31 3300003790 Ga0055528_1005681 Ga0055528_10056812 565
32 3300009148 Ga0105243_10034192 Ga0105243_100341922 565
33 3300009148 Ga0105243_10057100 Ga0105243_100571003 565
34 3300013296 Ga0157374_10112537 Ga0157374_101125372 565
35 3300025273 Ga0209673_1002909 Ga0209673_10029096 565
36 3300025294 Ga0209025_1002750 Ga0209025_10027505 565
37 3300025711 Ga0207696_1004595 Ga0207696_10045953 565
38 3300025735 Ga0207713_1024579 Ga0207713_10245792 565
39 3300031548 Ga0307408_100016932 Ga0307408_1000169322 565
40 3300048903 Ga0496100_0000291 Ga0496100_0000291_14024_15775 565
41 3300048904 Ga0496101_0005631 Ga0496101_0005631_1969_3720 565
42 3300048905 Ga0496102_0002210 Ga0496102_0002210_7034_8785 565
43 3300048906 Ga0496103_0003181 Ga0496103_0003181_7153_8904 565
44 3300048907 Ga0496104_0001710 Ga0496104_0001710_4149_5900 565
45 3300048908 Ga0496105_0000827 Ga0496105_0000827_12718_14469 565
46 3300048909 Ga0496106_0008374 Ga0496106_0008374_134_1885 565
47 3300048910 Ga0496107_0000750 Ga0496107_0000750_2103_3854 565
48 3300048911 Ga0496108_0000646 Ga0496108_0000646_6686_8437 565
49 3300048912 Ga0496109_0006307 Ga0496109_0006307_6920_8671 565
50 3300048914 Ga0496111_0004049 Ga0496111_0004049_378_2129 565
51 3300048915 Ga0496112_0002110 Ga0496112_0002110_981_2732 565
52 3300048916 Ga0496113_0026503 Ga0496113_0026503_1413_3164 565
53 3300048920 Ga0496117_0069375 Ga0496117_0069375_58_1809 565
54 3300048925 Ga0496122_0003541 Ga0496122_0003541_4270_6021 565
55 3300048926 Ga0496123_0062727 Ga0496123_0062727_131_1882 565
56 3300048928 Ga0496125_0028544 Ga0496125_0028544_351_2102 565
57 iso_pu_bacteria 2643221731 2644719778 565
58 iso_pu_bacteria 2928093941 2928097985 565
59 iso_pu_bacteria 2960319331 2960322128 566
60 iso_pu_bacteria 8046991243 8046998274 566
61 iso_pu_bacteria 2904113452 2904116829 568
62 iso_pu_bacteria 2956897341 2956901548 568
63 iso_pu_bacteria 2996386984 2996390544 568
64 iso_pu_bacteria 2971410472 2971410545 569
65 3300005983 Ga0081540_1000459 Ga0081540_100045925 570
66 iso_pu_bacteria 2857472729 2857476110 570
67 3300026118 Ga0207675_100062890 Ga0207675_1000628903 571
68 3300003758 Ga0055532_1000123 Ga0055532_100012320 572
69 3300025229 Ga0209147_100076 Ga0209147_10007676 572
70 3300006871 Ga0075434_100015092 Ga0075434_1000150923 573
71 3300046457 Ga0495590_0023606 Ga0495590_0023606_272_2044 573
72 iso_pu_bacteria 8002317523 8002318711 573
73 iso_pu_bacteria 2919425241 2919428182 574
74 iso_pu_bacteria 2971403814 2971410177 574
75 iso_pu_bacteria 8056533031 8056538184 574
76 iso_pu_bacteria 2818991459 2819671622 575
77 iso_pu_bacteria 2980125574 2980128372 575
78 3300031251 Ga0265327_10000008 Ga0265327_10000008385 576
79 3300049583 Ga0501067_0003213 Ga0501067_0003213_1861_3654 576
80 iso_pu_bacteria 2585428059 2587744175 577
81 iso_pu_bacteria 2857453340 2857459293 577
82 3300039062 Ga0400483_002665 Ga0400483_002665_1277_3091 578
83 iso_pu_bacteria 2904755435 2904756773 578
84 3300039062 Ga0400483_062827 Ga0400483_062827_7216_9030 579
85 3300039110 Ga0400487_34995 Ga0400487_34995_489_2303 579
86 3300053133 Ga0500655_000017 Ga0500655_000017_13293_15074 579
87 3300009094 Ga0111539_10027318 Ga0111539_100273186 580
88 3300009147 Ga0114129_10104786 Ga0114129_101047863 581
89 3300049744 Ga0501083_0077129 Ga0501083_0077129_302_2089 581
90 iso_pu_bacteria 2643221676 2644424215 581
91 3300045051 Ga0451576_0001174 Ga0451576_0001174_37990_39777 582
92 3300048929 Ga0496126_0018006 Ga0496126_0018006_1212_3023 584
93 3300038725 Ga0400484_42955 Ga0400484_42955_1840_3654 585
94 3300039062 Ga0400483_038753 Ga0400483_038753_488_2302 585
95 iso_pu_bacteria 2738543031 2739348468 585
96 iso_pu_bacteria 646564506 646814930 585
97 iso_pu_bacteria 2501025502 2501085130 586
98 iso_pu_bacteria 2510917013 2511090558 586
99 iso_pu_bacteria 2582581305 2585262658 586
100 iso_pu_bacteria 2889049205 2889055380 586
101 iso_pu_bacteria 2885342637 2885350532 587
102 3300009763 Ga0123340_1001765 Ga0123340_10017657 589
103 3300009765 Ga0123341_1001251 Ga0123341_10012517 589
104 3300025225 Ga0209566_100285 Ga0209566_1002854 589
105 3300048909 Ga0496106_0001056 Ga0496106_0001056_5942_7753 589
106 iso_pu_bacteria 2513237082 2513552544 589
107 iso_pu_bacteria 2513237083 2513560720 589
108 iso_pu_bacteria 2857357740 2857365237 589
109 iso_pu_bacteria 8003955200 8003958322 589
110 3300003354 JGI25160J50197_1000095 JGI25160J50197_100009566 590
111 3300003374 JGI25161J50226_1000071 JGI25161J50226_100007118 590
112 3300004625 Ga0055543_1000250 Ga0055543_100025018 590
113 3300005262 Ga0065165_1000408 Ga0065165_100040848 590
114 3300025284 Ga0209130_1000180 Ga0209130_100018017 590
115 3300025302 Ga0207426_1000017 Ga0207426_1000017472 590
116 3300005539 Ga0068853_100001192 Ga0068853_10000119214 591
117 3300026041 Ga0207639_10001095 Ga0207639_100010954 591
118 3300026116 Ga0207674_10004839 Ga0207674_100048392 591
119 3300031247 Ga0265340_10032639 Ga0265340_100326392 591
120 3300031249 Ga0265339_10051704 Ga0265339_100517041 591
121 iso_pu_bacteria 2871495908 2871496174 592
122 iso_pu_bacteria 2878760144 2878760403 592
123 iso_pu_bacteria 2878767105 2878767366 592
124 iso_pu_bacteria 2903540706 2903540968 592
125 iso_pu_bacteria 2924762789 2924769040 592
126 iso_pu_bacteria 2937994558 2937994821 592
127 iso_pu_bacteria 2958165035 2958165301 592
128 iso_pu_bacteria 2961163497 2961163759 592
129 iso_pu_bacteria 2965018300 2965018564 592
130 iso_pu_bacteria 2968171901 2968172165 592
131 iso_pu_bacteria 2970554993 2970555255 592
132 iso_pu_bacteria 2987659509 2987659771 592
133 iso_pu_bacteria 2987666974 2987672893 592
134 iso_pu_bacteria 3004188549 3004188818 592
135 iso_pu_bacteria 2599185156 2599334508 593
136 iso_pu_bacteria 2842922631 2842925280 593
137 3300031595 Ga0265313_10009201 Ga0265313_100092016 594
138 3300039062 Ga0400483_209211 Ga0400483_209211_8221_10032 594
139 iso_pu_bacteria 2818991461 2819687552 594
140 3300025935 Ga0207709_10078892 Ga0207709_100788922 595
141 3300025250 Ga0209026_1000002 Ga0209026_100000274 596
142 3300025256 Ga0209759_1001699 Ga0209759_100169910 596
143 3300038741 Ga0400488_47694 Ga0400488_47694_72_1889 596
144 3300039110 Ga0400487_24562 Ga0400487_24562_1180_2997 596
145 3300044658 Ga0466972_0004195 Ga0466972_0004195_3844_5646 596
146 3300046522 Ga0495643_0043334 Ga0495643_0043334_256_2058 596
147 3300053083 Ga0495655_0000475 Ga0495655_0000475_15_1817 596
148 3300053155 Ga0500620_000120 Ga0500620_000120_580_2382 596
149 3300054114 Ga0501084_0032108 Ga0501084_0032108_1006_2799 596
150 iso_pu_bacteria 2510917028 2511182991 596
151 iso_pu_bacteria 2582581294 2585204354 596
152 iso_pu_bacteria 2791355260 2793321634 596
153 iso_pu_bacteria 2791355264 2793346113 596
154 iso_pu_bacteria 2791355266 2793359950 596
155 iso_pu_bacteria 2838022645 2838024954 596
156 iso_pu_bacteria 2838680041 2838685764 596
157 iso_pu_bacteria 2838694306 2838700346 596
158 iso_pu_bacteria 2838707686 2838713601 596
159 iso_pu_bacteria 2842077413 2842082772 596
160 iso_pu_bacteria 2842118031 2842123890 596
161 iso_pu_bacteria 2842198810 2842202038 596
162 iso_pu_bacteria 2842237096 2842243004 596
163 iso_pu_bacteria 2842291075 2842297087 596
164 iso_pu_bacteria 2842370503 2842376417 596
165 iso_pu_bacteria 2842377471 2842383460 596
166 iso_pu_bacteria 2842384541 2842390647 596
167 iso_pu_bacteria 2935894831 2935900210 596
168 iso_pu_bacteria 8002745576 8002749813 596
169 3300053125 Ga0500618_012410 Ga0500618_012410_169_1977 597
170 iso_pu_bacteria 2791355091 2792624479 597
171 iso_pu_bacteria 2791355092 2792630585 597
172 iso_pu_bacteria 8054558443 8054563353 597
173 3300031616 Ga0307508_10126446 Ga0307508_101264462 598
174 3300053125 Ga0500618_000296 Ga0500618_000296_19724_21559 598
175 iso_pu_bacteria 2537561587 2537872829 598
176 iso_pu_bacteria 2856349417 2856350051 598
177 iso_pu_bacteria 2881155292 2881160734 598
178 iso_pu_bacteria 2885305155 2885307914 598
179 iso_pu_bacteria 2961127735 2961136553 598
180 iso_pu_bacteria 3005409236 3005416389 598
181 3300006178 Ga0075367_10030517 Ga0075367_100305173 599
182 3300026118 Ga0207675_100018370 Ga0207675_1000183706 599
183 3300050515 nmdc:mga0a205_26724_c1 nmdc:mga0a205_26724_c1_1404_3209 599
184 iso_pu_bacteria 2513237090 2513609008 599
185 iso_pu_bacteria 2856356410 2856361412 599
186 iso_pu_bacteria 2856364286 2856366831 599
187 iso_pu_bacteria 2857349434 2857352276 599
188 iso_pu_bacteria 2869285874 2869287757 599
189 iso_pu_bacteria 2871429161 2871435705 599
190 iso_pu_bacteria 2871488783 2871493556 599
191 iso_pu_bacteria 2874146452 2874151388 599
192 iso_pu_bacteria 2874155637 2874159022 599
193 iso_pu_bacteria 2876392853 2876397671 599
194 iso_pu_bacteria 2876413966 2876417441 599
195 iso_pu_bacteria 2878745973 2878749268 599
196 iso_pu_bacteria 2878753008 2878757598 599
197 iso_pu_bacteria 2881147464 2881149545 599
198 iso_pu_bacteria 2881161766 2881166434 599
199 iso_pu_bacteria 2881845957 2881847867 599
200 iso_pu_bacteria 2881861095 2881863971 599
201 iso_pu_bacteria 2882912400 2882916352 599
202 iso_pu_bacteria 2885318864 2885321924 599
203 iso_pu_bacteria 2888350351 2888354676 599
204 iso_pu_bacteria 2889010040 2889016293 599
205 iso_pu_bacteria 2889016732 2889018685 599
206 iso_pu_bacteria 2903492973 2903501328 599
207 iso_pu_bacteria 2903492973 2903505701 599
208 iso_pu_bacteria 2904659560 2904664322 599
209 iso_pu_bacteria 2906308376 2906310306 599
210 iso_pu_bacteria 2906321335 2906324371 599
211 iso_pu_bacteria 2906354277 2906362282 599
212 iso_pu_bacteria 2922185730 2922190576 599
213 iso_pu_bacteria 2924784321 2924786893 599
214 iso_pu_bacteria 2937813078 2937817130 599
215 iso_pu_bacteria 2937848649 2937850212 599
216 iso_pu_bacteria 2958041894 2958052554 599
217 iso_pu_bacteria 2958100919 2958105069 599
218 iso_pu_bacteria 2958130278 2958132159 599
219 iso_pu_bacteria 2958179912 2958181973 599
220 iso_pu_bacteria 2961077736 2961079817 599
221 iso_pu_bacteria 2961114664 2961119321 599
222 iso_pu_bacteria 2961170736 2961175075 599
223 iso_pu_bacteria 2967996073 2967999924 599
224 iso_pu_bacteria 2968003550 2968008283 599
225 iso_pu_bacteria 2968110612 2968115576 599
226 iso_pu_bacteria 2968117919 2968118959 599
227 iso_pu_bacteria 2970503327 2970507663 599
228 iso_pu_bacteria 2977821940 2977826755 599
229 iso_pu_bacteria 2977843712 2977847421 599
230 iso_pu_bacteria 2977864932 2977871313 599
231 iso_pu_bacteria 2977942078 2977945695 599
232 iso_pu_bacteria 2979710463 2979714904 599
233 iso_pu_bacteria 2979742915 2979749112 599
234 iso_pu_bacteria 2979808191 2979812847 599
235 iso_pu_bacteria 2987636660 2987639460 599
236 iso_pu_bacteria 2987652177 2987657960 599
237 iso_pu_bacteria 3004203850 3004204296 599
238 iso_pu_bacteria 8004374579 8004379171 599
239 iso_pu_bacteria 8004387939 8004389542 599
240 iso_pu_bacteria 8004640170 8004644055 599
241 iso_pu_bacteria 8004714634 8004717940 599
242 3300046453 Ga0495627_021744 Ga0495627_021744_122_1957 600
243 3300048907 Ga0496104_0000355 Ga0496104_0000355_19047_20900 600
244 3300048911 Ga0496108_0009729 Ga0496108_0009729_4275_6128 600
245 iso_pu_bacteria 2582581299 2585230231 601
246 iso_pu_bacteria 2643221643 2644239347 601
247 3300037471 Ga0395905_0042751 Ga0395905_0042751_1784_3616 603
248 3300048922 Ga0496119_0007760 Ga0496119_0007760_1811_3643 603
249 3300048923 Ga0496120_0001664 Ga0496120_0001664_1473_3305 603
250 3300046530 Ga0495654_0000114 Ga0495654_0000114_46690_48531 604
251 3300048907 Ga0496104_0037016 Ga0496104_0037016_536_2374 604
252 3300053125 Ga0500618_000031 Ga0500618_000031_50836_52677 604
253 3300002704 JGI25155J39150_1000017 JGI25155J39150_100001731 605
254 3300002705 JGI25156J39149_1000034 JGI25156J39149_100003479 605
255 3300002738 JGI25154J39366_1000034 JGI25154J39366_1000034139 605
256 3300002741 JGI25157J39369_1000092 JGI25157J39369_100009248 605
257 3300006038 Ga0075365_10004903 Ga0075365_100049036 605
258 3300025206 Ga0209435_100023 Ga0209435_100023160 605
259 3300025246 Ga0209646_1000080 Ga0209646_1000080160 605
260 3300025250 Ga0209026_1000076 Ga0209026_1000076160 605
261 3300025256 Ga0209759_1000059 Ga0209759_1000059160 605
262 3300046492 Ga0495585_0056348 Ga0495585_0056348_177_2003 605
263 3300046506 Ga0495583_0004969 Ga0495583_0004969_2244_4070 605

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21986

AH_C

Allophanate hydrolase C-terminal domain

548

670

0.98

PF01425

Amidase

Amidase

42

455

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
4cp8-assembly2.cif.gz_D structure of the amidase domain of allophanate hydrolase from pseudomonas sp strain adp 0.9758 8 443
4gyr-assembly1.cif.gz_B granulibacter bethesdensis allophanate hydrolase apo 0.971 7 461
4gyr-assembly1.cif.gz_B granulibacter bethesdensis allophanate hydrolase apo 0.9524 7 461
4cp8-assembly2.cif.gz_D structure of the amidase domain of allophanate hydrolase from pseudomonas sp strain adp 0.9501 8 443
5c5z-assembly1.cif.gz_B crystal structure analysis of c4763, a uropathogenic e. coli-specific protein 0.9464 472 597
ID Description Score Start End Superfamily
4cp8A00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9731 8 443 3.90.1300.10
4gyrA01 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9683 7 461 3.90.1300.10
4issB03 Alpha Beta;Roll;Hypothetical upf0131 protein ytfp;Gamma-glutamyl cyclotransferase-like 0.9576 473 599 3.10.490.10
4gyrA01 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9462 7 461 3.90.1300.10
4cp8A00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9454 8 443 3.90.1300.10
ID Description Score Start End GO Terms
AF-A0A074YUG5-F1-model_v4 Allophanate hydrolase C-terminal domain-containing protein 0.9887 473 598
AF-A0A4S0RAC4-F1-model_v4 Allophanate hydrolase 0.9868 16 143 GO:0016787
AF-A0A0K0STS0-F1-model_v4 Amidase 0.9829 472 601
AF-A0A2P6F8Q4-F1-model_v4 Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-) 0.981 116 238 GO:0016740
GO:0016874
AF-X1UG63-F1-model_v4 Amidase domain-containing protein 0.9809 114 240 GO:0003824

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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