F372257

General Info

Members Datasets Scaffolds Average Seq Length
263 187 526 227

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2861691609|2861696118
Length 225
Sequence ILVIDDEPPIRKLLRMGLATQGYAVVEAADARTALDRLGRERVDLVILDLGLPDMRGHDLLRAIRTGHPDRPVVVLSSRDDEAGKVEALDLGADDYVTKPFGMAELLARLRTALRHQLAVQGERPVFRVDGLSVDLIRRIVRVNDVEVKLTPREYDFLRVMVQHAGKVLTHAQLMSQVNASSEPQYLRVYMRQLRQKLEADPERPRLLLTETGIGYRLKAPDDAG

Samples

Sample ID Description Type Environment
1 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
46 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
49 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
50 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
51 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
52 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
77 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
78 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
79 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
111 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
112 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
113 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
114 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
115 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
116 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
117 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
118 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
119 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
120 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
123 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
124 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
125 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
126 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
127 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
128 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
129 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
130 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
131 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
132 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
133 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
134 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
135 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
136 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
137 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
138 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
141 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
142 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
143 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
148 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
149 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
164 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
165 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
166 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
167 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
168 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
171 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
172 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
173 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
174 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
175 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
176 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
179 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
180 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
181 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
182 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
183 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
186 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
187 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.24
Metatranscriptomes 0.38
Isolates 0.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.18
Nodule 0
Rhizoplane 10.65
Rhizosphere 82.51
Stem 0
Stem Tuber 0
Unclassified 0.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24750J21931_1001364 3300002070 Bacteria 3066
2 JGI25165J46597_1002946 3300003214 Bacteria 4754
3 JGI25153J46596_10004318 3300003215 Bacteria 7686
4 Ga0070658_10285099 3300005327 Bacteria 1406
5 Ga0070670_100013565 3300005331 Bacteria 6984
6 Ga0070670_100020163 3300005331 Bacteria 5728
7 Ga0070680_100029526 3300005336 Bacteria 4404
8 Ga0070660_100005914 3300005339 Bacteria 8462
9 Ga0070691_10007548 3300005341 Bacteria 4986
10 Ga0070661_100277579 3300005344 Bacteria 1299
11 Ga0070671_100006185 3300005355 Bacteria 9538
12 Ga0070673_100107425 3300005364 Bacteria 2308
13 Ga0070688_100092288 3300005365 Bacteria 1980
14 Ga0070659_100459735 3300005366 Bacteria 1081
15 Ga0070667_100463202 3300005367 Bacteria 1159
16 Ga0070703_10011874 3300005406 Bacteria 2464
17 Ga0070709_10334531 3300005434 Bacteria 1115
18 Ga0070713_100078555 3300005436 Bacteria 2810
19 Ga0070701_10007761 3300005438 Bacteria 4606
20 Ga0070705_100000508 3300005440 Bacteria 22491
21 Ga0070700_100005087 3300005441 Bacteria 6937
22 Ga0070694_100000753 3300005444 Bacteria 18124
23 Ga0070708_100023198 3300005445 Bacteria 5273
24 Ga0070663_100018564 3300005455 Bacteria 4565
25 Ga0070681_10025334 3300005458 Bacteria 5967
26 Ga0070685_10128673 3300005466 Bacteria 1581
27 Ga0070706_100079357 3300005467 Bacteria 3038
28 Ga0070699_100011482 3300005518 Bacteria 7648
29 Ga0070679_100106138 3300005530 Bacteria 2794
30 Ga0070684_100300907 3300005535 Bacteria 1472
31 Ga0070697_100004490 3300005536 Bacteria 10729
32 Ga0068853_100222329 3300005539 Bacteria 1725
33 Ga0070686_100038034 3300005544 Bacteria 2989
34 Ga0070695_100003660 3300005545 Bacteria 8954
35 Ga0070696_100013540 3300005546 Bacteria 5474
36 Ga0070696_100337405 3300005546 Bacteria 1164
37 Ga0068855_100023240 3300005563 Bacteria 7426
38 Ga0068857_100044513 3300005577 Bacteria 3937
39 Ga0070702_100032259 3300005615 Bacteria 2873
40 Ga0068852_100973516 3300005616 Bacteria 867
41 Ga0068859_100027528 3300005617 Bacteria 5702
42 Ga0068864_100233996 3300005618 Bacteria 1700
43 Ga0068864_100630925 3300005618 Bacteria 1042
44 Ga0068863_100115816 3300005841 Bacteria 2554
45 Ga0068858_100091519 3300005842 Bacteria 2831
46 Ga0068858_100698941 3300005842 Bacteria 987
47 Ga0068862_100082382 3300005844 Bacteria 2792
48 Ga0081455_10044491 3300005937 Bacteria 3872
49 Ga0081455_10163937 3300005937 Bacteria 1700
50 Ga0081538_10003269 3300005981 Bacteria 15388
51 Ga0081540_1000034 3300005983 Bacteria 142197
52 Ga0081540_1000376 3300005983 Bacteria 44722
53 Ga0081540_1009511 3300005983 Bacteria 6695
54 Ga0081540_1066356 3300005983 Bacteria 1691
55 Ga0081540_1120381 3300005983 Bacteria 1090
56 Ga0081539_10012657 3300005985 Bacteria 6467
57 Ga0070717_10202416 3300006028 Bacteria 1739
58 Ga0075365_10359245 3300006038 Bacteria 1027
59 Ga0070715_10004018 3300006163 Bacteria 4770
60 Ga0075367_10202942 3300006178 Bacteria 1239
61 Ga0075366_10158901 3300006195 Bacteria 1369
62 Ga0075428_100031039 3300006844 Bacteria 5909
63 Ga0075428_100066402 3300006844 Bacteria 3949
64 Ga0075428_100104503 3300006844 Bacteria 3089
65 Ga0075428_100388100 3300006844 Bacteria 1497
66 Ga0075430_100058960 3300006846 Bacteria 3227
67 Ga0075430_100175363 3300006846 Bacteria 1783
68 Ga0075431_100000892 3300006847 Bacteria 26338
69 Ga0075431_100532003 3300006847 Bacteria 1164
70 Ga0075433_10003857 3300006852 Bacteria 11607
71 Ga0075433_10068230 3300006852 Bacteria 3122
72 Ga0075434_100205167 3300006871 Bacteria 1991
73 Ga0075429_100098718 3300006880 Bacteria 2548
74 Ga0075429_100326124 3300006880 Bacteria 1344
75 Ga0097620_100027528 3300006931 Bacteria 5702
76 Ga0075435_100026949 3300007076 Bacteria 4490
77 Ga0075435_100070896 3300007076 Bacteria 2845
78 Ga0075435_100745094 3300007076 Bacteria 852
79 Ga0111539_10038600 3300009094 Bacteria 5761
80 Ga0111539_10045666 3300009094 Bacteria 5243
81 Ga0111539_10188569 3300009094 Bacteria 2407
82 Ga0105245_10825112 3300009098 Bacteria 966
83 Ga0105247_10058767 3300009101 Bacteria 2380
84 Ga0114129_10201960 3300009147 Bacteria 2692
85 Ga0114129_10347364 3300009147 Bacteria 1966
86 Ga0105243_10109848 3300009148 Bacteria 2304
87 Ga0105248_10231058 3300009177 Bacteria 2082
88 Ga0105249_10003884 3300009553 Bacteria 12908
89 Ga0099796_10006653 3300010159 Bacteria 2973
90 Ga0105239_10955780 3300010375 Bacteria 984
91 Ga0105239_11396865 3300010375 Bacteria 808
92 Ga0105246_10127825 3300011119 Bacteria 1893
93 Ga0105246_10586759 3300011119 Bacteria 961
94 Ga0163162_10363807 3300013306 Bacteria 1579
95 Ga0163162_10657794 3300013306 Bacteria 1171
96 Ga0157375_10028687 3300013308 Bacteria 5222
97 Ga0157375_10674696 3300013308 Bacteria 1188
98 Ga0163163_10897149 3300014325 Bacteria 950
99 Ga0157380_11145075 3300014326 Bacteria 819
100 Ga0157379_10134852 3300014968 Bacteria 2224
101 Ga0157376_10131312 3300014969 Bacteria 2235
102 Ga0213874_10022242 3300021377 Bacteria 1757
103 Ga0209233_1000626 3300025261 Bacteria 17730
104 Ga0207653_10013846 3300025885 Bacteria 2528
105 Ga0207685_10073378 3300025905 Bacteria 1394
106 Ga0207685_10088712 3300025905 Bacteria 1297
107 Ga0207705_10002114 3300025909 Bacteria 15429
108 Ga0207684_10108709 3300025910 Bacteria 2373
109 Ga0207707_10019301 3300025912 Bacteria 5950
110 Ga0207693_10044937 3300025915 Bacteria 3471
111 Ga0207693_10111889 3300025915 Bacteria 2142
112 Ga0207660_10032276 3300025917 Bacteria 3614
113 Ga0207657_10000774 3300025919 Bacteria 33927
114 Ga0207652_10172165 3300025921 Bacteria 1943
115 Ga0207646_10251126 3300025922 Bacteria 1598
116 Ga0207650_10006480 3300025925 Bacteria 7975
117 Ga0207650_10009850 3300025925 Bacteria 6537
118 Ga0207700_10066176 3300025928 Bacteria 2761
119 Ga0207700_10068713 3300025928 Bacteria 2716
120 Ga0207700_10113765 3300025928 Bacteria 2182
121 Ga0207664_10029153 3300025929 Bacteria 4202
122 Ga0207690_10246543 3300025932 Bacteria 1378
123 Ga0207706_10583298 3300025933 Bacteria 961
124 Ga0207709_10064064 3300025935 Bacteria 2306
125 Ga0207670_10394781 3300025936 Bacteria 1105
126 Ga0207665_10220340 3300025939 Bacteria 1390
127 Ga0207651_10181170 3300025960 Bacteria 1671
128 Ga0207712_10000633 3300025961 Bacteria 27772
129 Ga0207658_10577791 3300025986 Bacteria 1008
130 Ga0207703_10085925 3300026035 Bacteria 2634
131 Ga0207639_10000893 3300026041 Bacteria 20232
132 Ga0207639_10339028 3300026041 Bacteria 1340
133 Ga0207708_10007214 3300026075 Bacteria 8217
134 Ga0207641_10543473 3300026088 Bacteria 1132
135 Ga0207676_10146700 3300026095 Bacteria 2027
136 Ga0207676_10554585 3300026095 Bacteria 1098
137 Ga0207674_10002863 3300026116 Bacteria 21432
138 Ga0207675_100087805 3300026118 Bacteria 2921
139 Ga0268266_10061368 3300028379 Bacteria 3243
140 Ga0268265_10006720 3300028380 Bacteria 7783
141 Ga0268264_10065329 3300028381 Bacteria 3065
142 Ga0268264_10252019 3300028381 Bacteria 1640
143 Ga0265762_1007696 3300030760 Bacteria 1919
144 Ga0307513_10163617 3300031456 Bacteria 2113
145 Ga0307412_10686502 3300031911 Bacteria 877
146 Ga0373929_0094085 3300035085 Bacteria 747
147 Ga0373936_0031076 3300035113 Bacteria 2108
148 Ga0373941_0015369 3300035115 Bacteria 2062
149 Ga0373954_0089668 3300035118 Bacteria 1476
150 Ga0373960_0009257 3300035121 Bacteria 2380
151 Ga0373931_0000948 3300035691 Bacteria 12194
152 Ga0373927_0214293 3300035695 Bacteria 1265
153 Ga0373933_0373947 3300035724 Bacteria 927
154 Ga0373925_0211505 3300037068 Bacteria 1545
155 Ga0436365_0588708 3300039437 Bacteria 1004
156 Ga0436365_0902842 3300039437 Bacteria 1039
157 Ga0436365_1673338 3300039437 Bacteria 1269
158 Ga0436363_0233687 3300039450 Bacteria 2640
159 Ga0436363_0463370 3300039450 Bacteria 5201
160 Ga0436362_0959553 3300039453 Bacteria 1218
161 Ga0495592_0296537 3300046454 Bacteria 1052
162 Ga0495629_0101885 3300046459 Bacteria 2003
163 Ga0495638_0002321 3300046460 Bacteria 15670
164 Ga0495662_0114928 3300046476 Bacteria 1320
165 Ga0495594_0077530 3300046499 Bacteria 1854
166 Ga0495630_0180015 3300046517 Bacteria 1612
167 Ga0495640_0014234 3300046533 Bacteria 6029
168 Ga0495634_0056540 3300046642 Bacteria 2621
169 Ga0495634_0079721 3300046642 Bacteria 2144
170 Ga0495635_0466836 3300046663 Bacteria 833
171 Ga0495658_0453750 3300046683 Bacteria 819
172 Ga0495613_0027621 3300046689 Bacteria 4224
173 Ga0495613_0190587 3300046689 Bacteria 1449
174 Ga0495624_0215485 3300046690 Bacteria 1165
175 Ga0495674_0195663 3300047319 Bacteria 1679
176 Ga0495672_0060330 3300047320 Bacteria 2192
177 Ga0495680_0197021 3300047322 Bacteria 1447
178 Ga0496100_0076147 3300048903 Bacteria 2252
179 Ga0496101_0107909 3300048904 Bacteria 2092
180 Ga0496102_0110653 3300048905 Bacteria 2560
181 Ga0496102_0665796 3300048905 Bacteria 964
182 Ga0496103_0015024 3300048906 Bacteria 4603
183 Ga0496103_0065043 3300048906 Bacteria 2274
184 Ga0496104_0005162 3300048907 Bacteria 11410
185 Ga0496104_0031627 3300048907 Bacteria 4922
186 Ga0496105_0008001 3300048908 Bacteria 8214
187 Ga0496105_0060921 3300048908 Bacteria 3114
188 Ga0496106_0018107 3300048909 Bacteria 5208
189 Ga0496106_0035631 3300048909 Bacteria 3721
190 Ga0496106_0046773 3300048909 Bacteria 3254
191 Ga0496107_0092907 3300048910 Bacteria 2206
192 Ga0496107_0202973 3300048910 Bacteria 1474
193 Ga0496108_0003718 3300048911 Bacteria 12234
194 Ga0496108_0215275 3300048911 Bacteria 1668
195 Ga0496109_0000665 3300048912 Bacteria 28480
196 Ga0496109_0037129 3300048912 Bacteria 4401
197 Ga0496110_0222077 3300048913 Bacteria 1718
198 Ga0496111_0005703 3300048914 Bacteria 8023
199 Ga0496111_0046069 3300048914 Bacteria 3139
200 Ga0496112_0004550 3300048915 Bacteria 11780
201 Ga0496112_0092332 3300048915 Bacteria 2997
202 Ga0496112_0293037 3300048915 Bacteria 1573
203 Ga0496112_0319742 3300048915 Bacteria 1496
204 Ga0496113_0001628 3300048916 Bacteria 12652
205 Ga0496115_0061712 3300048918 Bacteria 3023
206 Ga0501031_0043834 3300049568 Bacteria 2919
207 Ga0501033_0246955 3300049570 Bacteria 1266
208 Ga0501037_0259678 3300049573 Bacteria 1214
209 Ga0501039_0151500 3300049575 Bacteria 1822
210 Ga0501039_0324456 3300049575 Bacteria 1210
211 Ga0501040_0053370 3300049576 Bacteria 2768
212 Ga0501041_0115011 3300049577 Bacteria 1670
213 Ga0501046_0000010 3300049580 Bacteria 331082
214 Ga0501046_0110309 3300049580 Bacteria 2103
215 Ga0501046_0121226 3300049580 Bacteria 1989
216 Ga0501046_0131902 3300049580 Bacteria 1895
217 Ga0501046_0213237 3300049580 Bacteria 1432
218 Ga0501048_0251368 3300049582 Bacteria 1255
219 Ga0501071_0262493 3300049587 Bacteria 1305
220 Ga0501071_0532062 3300049587 Bacteria 902
221 Ga0501072_0002232 3300049588 Bacteria 14466
222 Ga0501072_0008821 3300049588 Bacteria 7660
223 Ga0501072_0166140 3300049588 Bacteria 1761
224 Ga0501072_0244060 3300049588 Bacteria 1431
225 Ga0501074_0041842 3300049590 Bacteria 3316
226 Ga0501075_0008388 3300049591 Bacteria 7208
227 Ga0501075_0183595 3300049591 Bacteria 1596
228 Ga0501075_0223868 3300049591 Bacteria 1435
229 Ga0501081_0021310 3300049743 Bacteria 4324
230 Ga0501081_0087962 3300049743 Unclassified 2182
231 Ga0501083_0346690 3300049744 Bacteria 965
232 Ga0501035_0416162 3300049822 Bacteria 1116
233 Ga0501045_0070355 3300049824 Bacteria 2574
234 Ga0501045_0071613 3300049824 Unclassified 2551
235 nmdc:mga0k408_66570_c1 3300050493 Bacteria 2098
236 nmdc:mga07m45_36964_c1 3300050496 Bacteria 2722
237 nmdc:mga05p37_289956_c1 3300050507 Bacteria 1948
238 nmdc:mga05p37_422479_c1 3300050507 Bacteria 1551
239 nmdc:mga05p37_603862_c1 3300050507 Bacteria 1238
240 nmdc:mga09592_317821_c1 3300050508 Bacteria 1349
241 nmdc:mga09592_550217_c1 3300050508 Bacteria 991
242 nmdc:mga0qj67_38568_c1 3300050509 Bacteria 3748
243 nmdc:mga06r32_148953_c1 3300050510 Bacteria 2318
244 nmdc:mga06r32_60848_c1 3300050510 Bacteria 3634
245 nmdc:mga0n895_22886_c1 3300050512 Bacteria 5862
246 nmdc:mga0n895_599614_c1 3300050512 Bacteria 1104
247 nmdc:mga0rr50_86390_c1 3300050513 Bacteria 2433
248 nmdc:mga0rr50_87009_c1 3300050513 Bacteria 2425
249 nmdc:mga0a205_139658_c1 3300050515 Bacteria 2323
250 nmdc:mga0a205_18163_c1 3300050515 Bacteria 6607
251 Ga0495595_0113167 3300053084 Bacteria 1317
252 Ga0495619_0004870 3300053085 Bacteria 8524
253 Ga0495619_0308019 3300053085 Bacteria 1097
254 Ga0500583_0258471 3300053092 Bacteria 859
255 Ga0500616_0010945 3300053153 Bacteria 5399
256 Ga0500616_0088751 3300053153 Bacteria 1536
257 Ga0501084_0009794 3300054114 Bacteria 7921
258 Ga0501084_0133345 3300054114 Bacteria 2091
259 Ga0501084_0157742 3300054114 Bacteria 1914
260 Ga0501084_0359889 3300054114 Bacteria 1229
261 Ga0501082_0005021 3300060353 Bacteria 11552
262 Ga0530510_0004618 3300061734 Bacteria 9526
263 2861696118 2861691609 Bacteria 5628931
264 JGI24750J21931_1001364
265 JGI25165J46597_1002946
266 JGI25153J46596_10004318
267 Ga0070658_10285099
268 Ga0070670_100013565
269 Ga0070670_100020163
270 Ga0070680_100029526
271 Ga0070660_100005914
272 Ga0070691_10007548
273 Ga0070661_100277579
274 Ga0070671_100006185
275 Ga0070673_100107425
276 Ga0070688_100092288
277 Ga0070659_100459735
278 Ga0070667_100463202
279 Ga0070703_10011874
280 Ga0070709_10334531
281 Ga0070713_100078555
282 Ga0070701_10007761
283 Ga0070705_100000508
284 Ga0070700_100005087
285 Ga0070694_100000753
286 Ga0070708_100023198
287 Ga0070663_100018564
288 Ga0070681_10025334
289 Ga0070685_10128673
290 Ga0070706_100079357
291 Ga0070699_100011482
292 Ga0070679_100106138
293 Ga0070684_100300907
294 Ga0070697_100004490
295 Ga0068853_100222329
296 Ga0070686_100038034
297 Ga0070695_100003660
298 Ga0070696_100013540
299 Ga0070696_100337405
300 Ga0068855_100023240
301 Ga0068857_100044513
302 Ga0070702_100032259
303 Ga0068852_100973516
304 Ga0068859_100027528
305 Ga0068864_100233996
306 Ga0068864_100630925
307 Ga0068863_100115816
308 Ga0068858_100091519
309 Ga0068858_100698941
310 Ga0068862_100082382
311 Ga0081455_10044491
312 Ga0081455_10163937
313 Ga0081538_10003269
314 Ga0081540_1000034
315 Ga0081540_1000376
316 Ga0081540_1009511
317 Ga0081540_1066356
318 Ga0081540_1120381
319 Ga0081539_10012657
320 Ga0070717_10202416
321 Ga0075365_10359245
322 Ga0070715_10004018
323 Ga0075367_10202942
324 Ga0075366_10158901
325 Ga0075428_100031039
326 Ga0075428_100066402
327 Ga0075428_100104503
328 Ga0075428_100388100
329 Ga0075430_100058960
330 Ga0075430_100175363
331 Ga0075431_100000892
332 Ga0075431_100532003
333 Ga0075433_10003857
334 Ga0075433_10068230
335 Ga0075434_100205167
336 Ga0075429_100098718
337 Ga0075429_100326124
338 Ga0097620_100027528
339 Ga0075435_100026949
340 Ga0075435_100070896
341 Ga0075435_100745094
342 Ga0111539_10038600
343 Ga0111539_10045666
344 Ga0111539_10188569
345 Ga0105245_10825112
346 Ga0105247_10058767
347 Ga0114129_10201960
348 Ga0114129_10347364
349 Ga0105243_10109848
350 Ga0105248_10231058
351 Ga0105249_10003884
352 Ga0099796_10006653
353 Ga0105239_10955780
354 Ga0105239_11396865
355 Ga0105246_10127825
356 Ga0105246_10586759
357 Ga0163162_10363807
358 Ga0163162_10657794
359 Ga0157375_10028687
360 Ga0157375_10674696
361 Ga0163163_10897149
362 Ga0157380_11145075
363 Ga0157379_10134852
364 Ga0157376_10131312
365 Ga0213874_10022242
366 Ga0209233_1000626
367 Ga0207653_10013846
368 Ga0207685_10073378
369 Ga0207685_10088712
370 Ga0207705_10002114
371 Ga0207684_10108709
372 Ga0207707_10019301
373 Ga0207693_10044937
374 Ga0207693_10111889
375 Ga0207660_10032276
376 Ga0207657_10000774
377 Ga0207652_10172165
378 Ga0207646_10251126
379 Ga0207650_10006480
380 Ga0207650_10009850
381 Ga0207700_10066176
382 Ga0207700_10068713
383 Ga0207700_10113765
384 Ga0207664_10029153
385 Ga0207690_10246543
386 Ga0207706_10583298
387 Ga0207709_10064064
388 Ga0207670_10394781
389 Ga0207665_10220340
390 Ga0207651_10181170
391 Ga0207712_10000633
392 Ga0207658_10577791
393 Ga0207703_10085925
394 Ga0207639_10000893
395 Ga0207639_10339028
396 Ga0207708_10007214
397 Ga0207641_10543473
398 Ga0207676_10146700
399 Ga0207676_10554585
400 Ga0207674_10002863
401 Ga0207675_100087805
402 Ga0268266_10061368
403 Ga0268265_10006720
404 Ga0268264_10065329
405 Ga0268264_10252019
406 Ga0265762_1007696
407 Ga0307513_10163617
408 Ga0307412_10686502
409 Ga0373929_0094085
410 Ga0373936_0031076
411 Ga0373941_0015369
412 Ga0373954_0089668
413 Ga0373960_0009257
414 Ga0373931_0000948
415 Ga0373927_0214293
416 Ga0373933_0373947
417 Ga0373925_0211505
418 Ga0436365_0588708
419 Ga0436365_0902842
420 Ga0436365_1673338
421 Ga0436363_0233687
422 Ga0436363_0463370
423 Ga0436362_0959553
424 Ga0495592_0296537
425 Ga0495629_0101885
426 Ga0495638_0002321
427 Ga0495662_0114928
428 Ga0495594_0077530
429 Ga0495630_0180015
430 Ga0495640_0014234
431 Ga0495634_0056540
432 Ga0495634_0079721
433 Ga0495635_0466836
434 Ga0495658_0453750
435 Ga0495613_0027621
436 Ga0495613_0190587
437 Ga0495624_0215485
438 Ga0495674_0195663
439 Ga0495672_0060330
440 Ga0495680_0197021
441 Ga0496100_0076147
442 Ga0496101_0107909
443 Ga0496102_0110653
444 Ga0496102_0665796
445 Ga0496103_0015024
446 Ga0496103_0065043
447 Ga0496104_0005162
448 Ga0496104_0031627
449 Ga0496105_0008001
450 Ga0496105_0060921
451 Ga0496106_0018107
452 Ga0496106_0035631
453 Ga0496106_0046773
454 Ga0496107_0092907
455 Ga0496107_0202973
456 Ga0496108_0003718
457 Ga0496108_0215275
458 Ga0496109_0000665
459 Ga0496109_0037129
460 Ga0496110_0222077
461 Ga0496111_0005703
462 Ga0496111_0046069
463 Ga0496112_0004550
464 Ga0496112_0092332
465 Ga0496112_0293037
466 Ga0496112_0319742
467 Ga0496113_0001628
468 Ga0496115_0061712
469 Ga0501031_0043834
470 Ga0501033_0246955
471 Ga0501037_0259678
472 Ga0501039_0151500
473 Ga0501039_0324456
474 Ga0501040_0053370
475 Ga0501041_0115011
476 Ga0501046_0000010
477 Ga0501046_0110309
478 Ga0501046_0121226
479 Ga0501046_0131902
480 Ga0501046_0213237
481 Ga0501048_0251368
482 Ga0501071_0262493
483 Ga0501071_0532062
484 Ga0501072_0002232
485 Ga0501072_0008821
486 Ga0501072_0166140
487 Ga0501072_0244060
488 Ga0501074_0041842
489 Ga0501075_0008388
490 Ga0501075_0183595
491 Ga0501075_0223868
492 Ga0501081_0021310
493 Ga0501081_0087962
494 Ga0501083_0346690
495 Ga0501035_0416162
496 Ga0501045_0070355
497 Ga0501045_0071613
498 nmdc:mga0k408_66570_c1
499 nmdc:mga07m45_36964_c1
500 nmdc:mga05p37_289956_c1
501 nmdc:mga05p37_422479_c1
502 nmdc:mga05p37_603862_c1
503 nmdc:mga09592_317821_c1
504 nmdc:mga09592_550217_c1
505 nmdc:mga0qj67_38568_c1
506 nmdc:mga06r32_148953_c1
507 nmdc:mga06r32_60848_c1
508 nmdc:mga0n895_22886_c1
509 nmdc:mga0n895_599614_c1
510 nmdc:mga0rr50_86390_c1
511 nmdc:mga0rr50_87009_c1
512 nmdc:mga0a205_139658_c1
513 nmdc:mga0a205_18163_c1
514 Ga0495595_0113167
515 Ga0495619_0004870
516 Ga0495619_0308019
517 Ga0500583_0258471
518 Ga0500616_0010945
519 Ga0500616_0088751
520 Ga0501084_0009794
521 Ga0501084_0133345
522 Ga0501084_0157742
523 Ga0501084_0359889
524 Ga0501082_0005021
525 Ga0530510_0004618
526 2861696118

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

1

111

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ifh-assembly1.cif.gz_A unphosphorylated spo0f from paenisporosarcina sp. tg-14 0.9699 6 120
1nat-assembly1.cif.gz_A crystal structure of spoof from bacillus subtilis 0.9651 6 111
7m0s-assembly1.cif.gz_B n-terminal domain of pmra from acinetobacter baumannii 0.9589 6 120
4d6x-assembly1.cif.gz_A crystal structure of the receiver domain of ntrx from brucella abortus 0.9588 8 120
6c40-assembly1.cif.gz_D-2 chey41pytyrd54k from thermotoga maritima 0.9533 7 118
ID Description Score Start End Superfamily
af_P0A9Q1_5_87_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9596 8 88 3.40.50.2300
af_Q06065_2_134_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9583 3 125 3.40.50.2300
af_P0AFJ5_1_84_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9555 5 81 3.40.50.2300
5m7oA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9535 5 125 3.40.50.2300
4tmyB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9534 6 118 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A3D3SA73-F1-model_v4 DNA-binding response regulator 0.9586 5 225 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-V4PE34-F1-model_v4 Fis family transcriptional regulator 0.9557 6 225 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A1B9TDJ5-F1-model_v4 deleted 0.9551 5 228
AF-A0A7H4KPE3-F1-model_v4 deleted 0.9541 5 228
AF-A0A4Q6G8C7-F1-model_v4 Response regulator 0.9522 1 225 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Map