F372214

General Info

Members Datasets Scaffolds Average Seq Length
263 151 261 700

Family's Representative Sequence

Representative Sequence 3300053090|Ga0500646_0005450|Ga0500646_0005450_273_2486
Length 737
Sequence MTTWMKRKTIARDISWLSFNARVLQEAADPTVPLRERIRFLGIFSNNLDEFFRVRVGTLKRMNEFSSRPGLNMHLEQAPDKILEEIQLIVLRQQNEFNRIWNTIQEELAKEKIFLVTEKQLNREQRQFVQTYFEEEVHSNTIPLMIESIPQFPYLRDKSIYLSVVLSKKDSAYKQKYALIEVPSKRLGRFTLLPSPPGEHHIILLEDVIRFNLPAVFSYFGYDKYDAWVFKVTKDAEIDIDSDVSTTIIQKIEKAVKSRRRGKPVRFVYDKEIDAGLLEYLMRRMNLTKRDNLIPGGRIHNFRHFMEFPDTVFAKKSQRKKPFQHPLLRSLTRVTDAVLETDIMLHFPYHSFNPVIDLLREAAIDPDVTTIRITAYRLAADSKIINALINAVRNGKQVTVMIELRARFEEEANLEWKERLEDEGVKVLIGISNMKVHAKICLIKKKVDKRIIQYGFVSTGNLHEKTATLYGDHCLLTANRNIMADVNRIFNFLEKPKDGLHFLKDCKTLIPCPTLLRKELIKMIDYEIRQAKHKKKACIYLKMNSLSDEMLIEKLYEAARAGVEIKLIVRSIFCMYSESKKFSKPVQAISIVDEYLEHARMFLFHNNGKEKVYISSADWMVRNLDHRVEVTCPVLENDIRTTLKKIFTIQLSDNVKARILNNELDNEYVKTGKDKKVRSQVEIYNYLFNKEKASETGSYRHRKQRSEAVDIGSGNEQRGQTGIQQAEPGKSTSPAGV

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
3 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
71 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
72 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
113 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
114 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
115 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
116 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
120 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
121 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
122 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
123 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
124 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
125 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
126 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
127 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
128 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
140 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
144 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
145 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
148 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
149 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
150 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
151 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.24
Metatranscriptomes 0
Isolates 0.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.66
Nodule 0
Rhizoplane 0.76
Rhizosphere 93.54
Stem 0
Stem Tuber 0
Unclassified 3.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_677025 2162886007 Bacteria 181955
2 rootH1_10120895 3300003323 Bacteria 4721
3 JGI25160J50197_1000740 3300003354 Bacteria 17785
4 Ga0065704_10070133 3300005289 Bacteria 1266035
5 Ga0065712_10005910 3300005290 Bacteria 4537
6 Ga0065712_10093771 3300005290 Bacteria 2279
7 Ga0070658_10000095 3300005327 Bacteria 77839
8 Ga0070676_10000580 3300005328 Bacteria 17716
9 Ga0070676_10017380 3300005328 Bacteria 3982
10 Ga0070670_100015158 3300005331 Bacteria 6614
11 Ga0070670_100036569 3300005331 Bacteria 4225
12 Ga0070670_100080831 3300005331 Bacteria 2793
13 Ga0070670_100089978 3300005331 Bacteria 2638
14 Ga0068869_100010747 3300005334 Bacteria 5977
15 Ga0070666_10000135 3300005335 Bacteria 51126
16 Ga0070666_10000192 3300005335 Bacteria 41657
17 Ga0070682_100000280 3300005337 Bacteria 36356
18 Ga0068868_100000091 3300005338 Bacteria 55405
19 Ga0070668_100000482 3300005347 Bacteria 26431
20 Ga0070668_100002566 3300005347 Bacteria 13357
21 Ga0070671_100058797 3300005355 Bacteria 3199
22 Ga0070674_100027573 3300005356 Bacteria 3723
23 Ga0070673_100000101 3300005364 Bacteria 38481
24 Ga0070673_100013348 3300005364 Bacteria 5678
25 Ga0070673_100048862 3300005364 Bacteria 3300
26 Ga0070673_100063712 3300005364 Bacteria 2934
27 Ga0070667_100000086 3300005367 Bacteria 114861
28 Ga0070667_100005250 3300005367 Bacteria 10829
29 Ga0070667_100005700 3300005367 Bacteria 10401
30 Ga0070667_100065799 3300005367 Bacteria 3078
31 Ga0070678_100020412 3300005456 Bacteria 4346
32 Ga0070662_100001896 3300005457 Bacteria 12828
33 Ga0070662_100013808 3300005457 Bacteria 5380
34 Ga0070681_10012571 3300005458 Bacteria 8400
35 Ga0068867_100023939 3300005459 Bacteria 4374
36 Ga0070698_100009763 3300005471 Bacteria 10258
37 Ga0070679_100001119 3300005530 Bacteria 23386
38 Ga0068853_100008539 3300005539 Bacteria 8234
39 Ga0070672_100000376 3300005543 Bacteria 25873
40 Ga0070672_100003451 3300005543 Bacteria 10241
41 Ga0070672_100007301 3300005543 Bacteria 7491
42 Ga0070665_100000031 3300005548 Bacteria 333365
43 Ga0070665_100000350 3300005548 Bacteria 69455
44 Ga0070665_100074510 3300005548 Bacteria 3400
45 Ga0070665_100141404 3300005548 Bacteria 2410
46 Ga0068855_100018121 3300005563 Bacteria 8462
47 Ga0068857_100058617 3300005577 Bacteria 3420
48 Ga0068854_100073026 3300005578 Bacteria 2513
49 Ga0068852_100020354 3300005616 Bacteria 5276
50 Ga0068852_100084178 3300005616 Bacteria 2829
51 Ga0068859_100000127 3300005617 Bacteria 72136
52 Ga0068859_100011389 3300005617 Bacteria 8944
53 Ga0068859_100026066 3300005617 Bacteria 5866
54 Ga0068859_100075353 3300005617 Bacteria 3414
55 Ga0068861_100007552 3300005719 Bacteria 7458
56 Ga0068861_100011869 3300005719 Bacteria 6066
57 Ga0068851_10006758 3300005834 Bacteria 5248
58 Ga0068870_10011417 3300005840 Bacteria 4117
59 Ga0068863_100000404 3300005841 Bacteria 43876
60 Ga0068863_100016651 3300005841 Bacteria 7054
61 Ga0068863_100029758 3300005841 Bacteria 5214
62 Ga0068863_100095994 3300005841 Bacteria 2814
63 Ga0068858_100000662 3300005842 Bacteria 35985
64 Ga0068858_100087772 3300005842 Bacteria 2893
65 Ga0068860_100000072 3300005843 Bacteria 174997
66 Ga0068860_100005139 3300005843 Bacteria 13310
67 Ga0068860_100005858 3300005843 Bacteria 12370
68 Ga0068860_100055036 3300005843 Bacteria 3781
69 Ga0068860_100075937 3300005843 Bacteria 3195
70 Ga0068862_100012837 3300005844 Bacteria 6929
71 Ga0068862_100067067 3300005844 Bacteria 3093
72 Ga0097621_100000390 3300006237 Bacteria 30528
73 Ga0097621_100061612 3300006237 Bacteria 3077
74 Ga0097621_100086292 3300006237 Bacteria 2619
75 Ga0068871_100000427 3300006358 Bacteria 29046
76 Ga0068871_100005078 3300006358 Bacteria 9195
77 Ga0068871_100037234 3300006358 Bacteria 3879
78 Ga0068871_100060944 3300006358 Bacteria 3079
79 Ga0075430_100004146 3300006846 Bacteria 12229
80 Ga0075430_100071465 3300006846 Bacteria 2911
81 Ga0075431_100009511 3300006847 Bacteria 9760
82 Ga0075429_100007161 3300006880 Bacteria 9680
83 Ga0075429_100043716 3300006880 Bacteria 3898
84 Ga0068865_100000552 3300006881 Bacteria 20801
85 Ga0068865_100004920 3300006881 Bacteria 8076
86 Ga0068865_100068308 3300006881 Bacteria 2512
87 Ga0097620_100000127 3300006931 Bacteria 72136
88 Ga0097620_100011388 3300006931 Bacteria 8944
89 Ga0097620_100026066 3300006931 Bacteria 5866
90 Ga0097620_100075351 3300006931 Bacteria 3414
91 Ga0105240_10000066 3300009093 Bacteria 212612
92 Ga0105240_10000319 3300009093 Bacteria 91429
93 Ga0105240_10001681 3300009093 Bacteria 37540
94 Ga0111539_10020494 3300009094 Bacteria 8143
95 Ga0105247_10000640 3300009101 Bacteria 28018
96 Ga0114129_10043965 3300009147 Bacteria 6284
97 Ga0105241_10000189 3300009174 Bacteria 46170
98 Ga0105241_10000995 3300009174 Bacteria 21469
99 Ga0105241_10001657 3300009174 Bacteria 16971
100 Ga0105242_10010565 3300009176 Bacteria 7089
101 Ga0105242_10076004 3300009176 Bacteria 2799
102 Ga0105248_10093227 3300009177 Unclassified 3391
103 Ga0105237_10006279 3300009545 Bacteria 13220
104 Ga0105237_10092715 3300009545 Bacteria 3010
105 Ga0105238_10000788 3300009551 Bacteria 32863
106 Ga0105249_10002638 3300009553 Bacteria 15511
107 Ga0105249_10006202 3300009553 Bacteria 10379
108 Ga0105249_10039468 3300009553 Bacteria 4287
109 Ga0105239_10002085 3300010375 Bacteria 25915
110 Ga0105239_10042665 3300010375 Bacteria 4970
111 Ga0105239_10060953 3300010375 Bacteria 4141
112 Ga0157371_10002214 3300013102 Bacteria 18811
113 Ga0157370_10000175 3300013104 Bacteria 79713
114 Ga0157370_10020914 3300013104 Bacteria 6527
115 Ga0157374_10000084 3300013296 Bacteria 94138
116 Ga0157378_10002685 3300013297 Bacteria 15856
117 Ga0157378_10004729 3300013297 Bacteria 11936
118 Ga0163162_10000113 3300013306 Bacteria 71491
119 Ga0163162_10000167 3300013306 Bacteria 60620
120 Ga0163162_10000531 3300013306 Bacteria 35292
121 Ga0163162_10002598 3300013306 Bacteria 17110
122 Ga0163162_10004040 3300013306 Bacteria 14077
123 Ga0163162_10069478 3300013306 Bacteria 3574
124 Ga0157372_10036276 3300013307 Bacteria 5433
125 Ga0157372_10100452 3300013307 Bacteria 3301
126 Ga0157372_10110424 3300013307 Unclassified 3150
127 Ga0157375_10000230 3300013308 Bacteria 52234
128 Ga0157375_10002270 3300013308 Bacteria 16650
129 Ga0157375_10027002 3300013308 Bacteria 5360
130 Ga0157375_10081952 3300013308 Bacteria 3267
131 Ga0163163_10000141 3300014325 Bacteria 74842
132 Ga0163163_10000306 3300014325 Bacteria 48215
133 Ga0163163_10004300 3300014325 Bacteria 12134
134 Ga0163163_10032971 3300014325 Bacteria 5006
135 Ga0157380_10049082 3300014326 Bacteria 3327
136 Ga0157379_10000446 3300014968 Bacteria 33441
137 Ga0157379_10033461 3300014968 Bacteria 4584
138 Ga0157376_10000276 3300014969 Bacteria 35001
139 Ga0157376_10004496 3300014969 Bacteria 9715
140 Ga0157376_10063819 3300014969 Bacteria 3104
141 Ga0157376_10106686 3300014969 Bacteria 2458
142 Ga0213876_10003392 3300021384 Bacteria 9120
143 Ga0207426_1000019 3300025302 Bacteria 558579
144 Ga0207710_10001856 3300025900 Bacteria 10176
145 Ga0207688_10007731 3300025901 Bacteria 5857
146 Ga0207680_10000057 3300025903 Bacteria 50978
147 Ga0207680_10000332 3300025903 Bacteria 22599
148 Ga0207647_10001743 3300025904 Bacteria 16673
149 Ga0207647_10005816 3300025904 Bacteria 8991
150 Ga0207645_10002568 3300025907 Bacteria 14160
151 Ga0207645_10002736 3300025907 Bacteria 13733
152 Ga0207643_10003365 3300025908 Bacteria 8614
153 Ga0207705_10002400 3300025909 Bacteria 14467
154 Ga0207707_10000297 3300025912 Bacteria 52580
155 Ga0207695_10000078 3300025913 Bacteria 297378
156 Ga0207695_10002237 3300025913 Bacteria 29034
157 Ga0207695_10013040 3300025913 Bacteria 9927
158 Ga0207671_10002264 3300025914 Bacteria 20830
159 Ga0207660_10000959 3300025917 Bacteria 19096
160 Ga0207662_10009304 3300025918 Bacteria 5399
161 Ga0207652_10006409 3300025921 Bacteria 9493
162 Ga0207681_10029252 3300025923 Bacteria 3576
163 Ga0207650_10003184 3300025925 Bacteria 11309
164 Ga0207650_10008971 3300025925 Bacteria 6837
165 Ga0207690_10009356 3300025932 Bacteria 5819
166 Ga0207706_10010946 3300025933 Bacteria 8273
167 Ga0207686_10002182 3300025934 Bacteria 10771
168 Ga0207670_10006710 3300025936 Bacteria 6403
169 Ga0207670_10024975 3300025936 Bacteria 3743
170 Ga0207704_10004766 3300025938 Bacteria 6227
171 Ga0207691_10003753 3300025940 Bacteria 14737
172 Ga0207691_10007835 3300025940 Bacteria 10291
173 Ga0207691_10012061 3300025940 Bacteria 8291
174 Ga0207691_10043805 3300025940 Bacteria 4123
175 Ga0207689_10004672 3300025942 Bacteria 12365
176 Ga0207689_10005196 3300025942 Bacteria 11683
177 Ga0207689_10005524 3300025942 Bacteria 11297
178 Ga0207689_10006997 3300025942 Bacteria 9917
179 Ga0207679_10012325 3300025945 Bacteria 5573
180 Ga0207667_10043557 3300025949 Bacteria 4763
181 Ga0207651_10000731 3300025960 Bacteria 14068
182 Ga0207712_10003040 3300025961 Bacteria 10714
183 Ga0207712_10024346 3300025961 Bacteria 4007
184 Ga0207668_10000520 3300025972 Bacteria 24120
185 Ga0207658_10000559 3300025986 Bacteria 33814
186 Ga0207658_10002410 3300025986 Bacteria 13689
187 Ga0207658_10036132 3300025986 Bacteria 3541
188 Ga0207677_10022682 3300026023 Bacteria 3862
189 Ga0207703_10002776 3300026035 Bacteria 14989
190 Ga0207703_10028161 3300026035 Bacteria 4426
191 Ga0207639_10010108 3300026041 Bacteria 6525
192 Ga0207641_10000229 3300026088 Bacteria 72315
193 Ga0207641_10000418 3300026088 Bacteria 49680
194 Ga0207641_10005110 3300026088 Bacteria 11239
195 Ga0207641_10013609 3300026088 Bacteria 6672
196 Ga0207641_10023367 3300026088 Bacteria 5094
197 Ga0207641_10074929 3300026088 Unclassified 2921
198 Ga0207648_10008865 3300026089 Bacteria 9683
199 Ga0207676_10012808 3300026095 Bacteria 6019
200 Ga0207676_10045364 3300026095 Bacteria 3396
201 Ga0207674_10013376 3300026116 Bacteria 9110
202 Ga0207674_10079275 3300026116 Bacteria 3288
203 Ga0207675_100009615 3300026118 Bacteria 9046
204 Ga0207675_100017345 3300026118 Bacteria 6721
205 Ga0207683_10004935 3300026121 Bacteria 11476
206 Ga0207683_10027946 3300026121 Bacteria 4875
207 Ga0207683_10047271 3300026121 Bacteria 3769
208 Ga0207698_10090422 3300026142 Bacteria 2503
209 Ga0268266_10000088 3300028379 Bacteria 199029
210 Ga0268266_10003264 3300028379 Bacteria 16341
211 Ga0268266_10032431 3300028379 Unclassified 4438
212 Ga0268264_10000201 3300028381 Bacteria 122060
213 Ga0268264_10001833 3300028381 Bacteria 19399
214 Ga0268264_10003340 3300028381 Bacteria 13869
215 Ga0268264_10016880 3300028381 Bacteria 5976
216 Ga0268264_10048378 3300028381 Bacteria 3538
217 Ga0307517_10000658 3300028786 Bacteria 59357
218 Ga0307515_10003094 3300028794 Bacteria 35226
219 Ga0265327_10003103 3300031251 Bacteria 16391
220 Ga0307508_10012017 3300031616 Bacteria 7922
221 Ga0307516_10002348 3300031730 Bacteria 25403
222 Ga0395905_0003301 3300037471 Bacteria 17319
223 Ga0395905_0053871 3300037471 Bacteria 3765
224 Ga0436365_1622828 3300039437 Bacteria 27494
225 Ga0439445_0001677 3300042004 Bacteria 4850
226 Ga0439457_002291 3300042014 Bacteria 5508
227 Ga0466972_0004878 3300044658 Bacteria 6729
228 Ga0466957_0025857 3300044842 Bacteria 3480
229 Ga0495594_0028100 3300046499 Bacteria 3034
230 Ga0495606_0006738 3300046507 Bacteria 10514
231 Ga0495643_0047826 3300046522 Bacteria 2315
232 Ga0495668_0000235 3300046616 Bacteria 78964
233 Ga0495672_0008890 3300047320 Bacteria 7344
234 Ga0495687_000010 3300047443 Bacteria 413735
235 Ga0495686_0001217 3300047472 Bacteria 29546
236 Ga0495686_0026466 3300047472 Bacteria 3794
237 Ga0496109_0014257 3300048912 Bacteria 6916
238 Ga0496114_0000170 3300048917 Bacteria 46131
239 Ga0501031_0009582 3300049568 Bacteria 6305
240 Ga0501033_0088467 3300049570 Bacteria 2266
241 Ga0501034_0029445 3300049571 Bacteria 5581
242 Ga0501034_0074106 3300049571 Bacteria 3412
243 Ga0501036_0005293 3300049572 Bacteria 10440
244 Ga0501037_0025375 3300049573 Bacteria 4380
245 Ga0501043_0038675 3300049579 Bacteria 3751
246 Ga0501047_0036717 3300049581 Bacteria 4737
247 Ga0501069_0028265 3300049585 Bacteria 3074
248 Ga0501083_0015690 3300049744 Bacteria 5302
249 Ga0501035_0033211 3300049822 Bacteria 4693
250 Ga0501044_0008160 3300049823 Bacteria 11489
251 Ga0501044_0042300 3300049823 Bacteria 4739
252 nmdc:mga0k408_24350_c1 3300050493 Bacteria 3421
253 nmdc:mga09592_23126_c1 3300050508 Bacteria 5131
254 nmdc:mga0qj67_20959_c1 3300050509 Bacteria 5010
255 nmdc:mga06r32_128991_c1 3300050510 Bacteria 2499
256 nmdc:mga06r32_34050_c1 3300050510 Bacteria 4802
257 Ga0500646_0005450 3300053090 Unclassified 3218
258 Ga0500568_0004581 3300053139 Bacteria 7364
259 Ga0500616_0001355 3300053153 Bacteria 23862
260 Ga0500611_000018 3300053727 Bacteria 111023
261 Ga0501082_0022294 3300060353 Bacteria 5456

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046522 Ga0495643_0047826 Ga0495643_0047826_192_1961 587
2 3300050493 nmdc:mga0k408_24350_c1 nmdc:mga0k408_24350_c1_32_1981 624
3 3300050510 nmdc:mga06r32_128991_c1 nmdc:mga06r32_128991_c1_93_2015 626
4 3300049570 Ga0501033_0088467 Ga0501033_0088467_310_2253 628
5 3300049581 Ga0501047_0036717 Ga0501047_0036717_2791_4713 628
6 3300005842 Ga0068858_100087772 Ga0068858_1000877722 642
7 3300013297 Ga0157378_10004729 Ga0157378_100047295 642
8 3300013306 Ga0163162_10000167 Ga0163162_1000016737 642
9 3300047443 Ga0495687_000010 Ga0495687_000010_400117_402126 642
10 3300006237 Ga0097621_100086292 Ga0097621_1000862921 651
11 3300006358 Ga0068871_100060944 Ga0068871_1000609444 651
12 3300014969 Ga0157376_10063819 Ga0157376_100638191 651
13 3300049571 Ga0501034_0029445 Ga0501034_0029445_2026_4164 662
14 3300049585 Ga0501069_0028265 Ga0501069_0028265_499_2637 662
15 3300049744 Ga0501083_0015690 Ga0501083_0015690_762_2900 662
16 3300060353 Ga0501082_0022294 Ga0501082_0022294_2355_4493 662
17 3300005841 Ga0068863_100029758 Ga0068863_1000297583 665
18 3300013297 Ga0157378_10002685 Ga0157378_100026858 665
19 3300026088 Ga0207641_10013609 Ga0207641_100136095 665
20 3300005331 Ga0070670_100036569 Ga0070670_1000365691 666
21 3300047472 Ga0495686_0026466 Ga0495686_0026466_468_2558 666
22 3300005367 Ga0070667_100005700 Ga0070667_1000057007 668
23 3300005617 Ga0068859_100026066 Ga0068859_1000260665 668
24 3300006931 Ga0097620_100026066 Ga0097620_1000260665 668
25 3300025986 Ga0207658_10002410 Ga0207658_100024106 668
26 3300026088 Ga0207641_10023367 Ga0207641_100233674 671
27 3300053727 Ga0500611_000018 Ga0500611_000018_32294_34381 671
28 3300005334 Ga0068869_100010747 Ga0068869_1000107472 672
29 3300005335 Ga0070666_10000135 Ga0070666_1000013544 672
30 3300005364 Ga0070673_100048862 Ga0070673_1000488622 672
31 3300005367 Ga0070667_100005250 Ga0070667_1000052507 672
32 3300005616 Ga0068852_100020354 Ga0068852_1000203542 672
33 3300005617 Ga0068859_100000127 Ga0068859_1000001279 672
34 3300005841 Ga0068863_100000404 Ga0068863_1000004049 672
35 3300005843 Ga0068860_100005139 Ga0068860_10000513910 672
36 3300006931 Ga0097620_100000127 Ga0097620_10000012762 672
37 3300009174 Ga0105241_10000995 Ga0105241_1000099514 672
38 3300009545 Ga0105237_10006279 Ga0105237_100062799 672
39 3300010375 Ga0105239_10042665 Ga0105239_100426653 672
40 3300013306 Ga0163162_10002598 Ga0163162_100025989 672
41 3300013306 Ga0163162_10004040 Ga0163162_100040402 672
42 3300013308 Ga0157375_10027002 Ga0157375_100270026 672
43 3300014325 Ga0163163_10032971 Ga0163163_100329712 672
44 3300014968 Ga0157379_10033461 Ga0157379_100334611 672
45 3300025903 Ga0207680_10000057 Ga0207680_1000005742 672
46 3300025914 Ga0207671_10002264 Ga0207671_100022649 672
47 3300025942 Ga0207689_10004672 Ga0207689_100046726 672
48 3300025986 Ga0207658_10036132 Ga0207658_100361324 672
49 3300026035 Ga0207703_10028161 Ga0207703_100281612 672
50 3300026088 Ga0207641_10000229 Ga0207641_100002299 672
51 3300026095 Ga0207676_10012808 Ga0207676_100128083 672
52 3300028381 Ga0268264_10003340 Ga0268264_100033409 672
53 3300044842 Ga0466957_0025857 Ga0466957_0025857_20_2152 680
54 3300005331 Ga0070670_100080831 Ga0070670_1000808312 682
55 3300009553 Ga0105249_10002638 Ga0105249_100026389 682
56 3300005327 Ga0070658_10000095 Ga0070658_1000009517 684
57 3300005328 Ga0070676_10000580 Ga0070676_100005804 684
58 3300005328 Ga0070676_10017380 Ga0070676_100173802 684
59 3300005335 Ga0070666_10000192 Ga0070666_1000019216 684
60 3300005338 Ga0068868_100000091 Ga0068868_10000009151 684
61 3300005347 Ga0070668_100000482 Ga0070668_10000048212 684
62 3300005364 Ga0070673_100000101 Ga0070673_10000010128 684
63 3300005364 Ga0070673_100013348 Ga0070673_1000133482 684
64 3300005367 Ga0070667_100000086 Ga0070667_10000008626 684
65 3300005367 Ga0070667_100065799 Ga0070667_1000657992 684
66 3300005456 Ga0070678_100020412 Ga0070678_1000204122 684
67 3300005457 Ga0070662_100001896 Ga0070662_10000189613 684
68 3300005458 Ga0070681_10012571 Ga0070681_100125711 684
69 3300005459 Ga0068867_100023939 Ga0068867_1000239392 684
70 3300005539 Ga0068853_100008539 Ga0068853_1000085397 684
71 3300005543 Ga0070672_100000376 Ga0070672_1000003769 684
72 3300005548 Ga0070665_100000350 Ga0070665_10000035054 684
73 3300005548 Ga0070665_100074510 Ga0070665_1000745102 684
74 3300005563 Ga0068855_100018121 Ga0068855_1000181215 684
75 3300005617 Ga0068859_100075353 Ga0068859_1000753532 684
76 3300005841 Ga0068863_100016651 Ga0068863_1000166515 684
77 3300005842 Ga0068858_100000662 Ga0068858_10000066233 684
78 3300005843 Ga0068860_100005858 Ga0068860_1000058582 684
79 3300005843 Ga0068860_100055036 Ga0068860_1000550362 684
80 3300006237 Ga0097621_100000390 Ga0097621_1000003905 684
81 3300006358 Ga0068871_100005078 Ga0068871_1000050785 684
82 3300006358 Ga0068871_100037234 Ga0068871_1000372342 684
83 3300006881 Ga0068865_100000552 Ga0068865_1000005525 684
84 3300006881 Ga0068865_100004920 Ga0068865_1000049207 684
85 3300006931 Ga0097620_100075351 Ga0097620_1000753511 684
86 3300009147 Ga0114129_10043965 Ga0114129_100439655 684
87 3300009174 Ga0105241_10000189 Ga0105241_1000018936 684
88 3300009176 Ga0105242_10010565 Ga0105242_100105656 684
89 3300009176 Ga0105242_10076004 Ga0105242_100760042 684
90 3300013104 Ga0157370_10000175 Ga0157370_1000017541 684
91 3300013296 Ga0157374_10000084 Ga0157374_1000008454 684
92 3300013306 Ga0163162_10000113 Ga0163162_1000011312 684
93 3300013308 Ga0157375_10002270 Ga0157375_100022706 684
94 3300013308 Ga0157375_10081952 Ga0157375_100819523 684
95 3300014325 Ga0163163_10000306 Ga0163163_1000030639 684
96 3300014968 Ga0157379_10000446 Ga0157379_1000044615 684
97 3300014969 Ga0157376_10000276 Ga0157376_100002768 684
98 3300014969 Ga0157376_10106686 Ga0157376_101066861 684
99 3300025901 Ga0207688_10007731 Ga0207688_100077312 684
100 3300025903 Ga0207680_10000332 Ga0207680_1000033214 684
101 3300025907 Ga0207645_10002568 Ga0207645_100025688 684
102 3300025907 Ga0207645_10002736 Ga0207645_100027366 684
103 3300025909 Ga0207705_10002400 Ga0207705_100024007 684
104 3300025938 Ga0207704_10004766 Ga0207704_100047664 684
105 3300025940 Ga0207691_10003753 Ga0207691_100037539 684
106 3300025942 Ga0207689_10005196 Ga0207689_100051962 684
107 3300025960 Ga0207651_10000731 Ga0207651_100007318 684
108 3300025972 Ga0207668_10000520 Ga0207668_100005202 684
109 3300025986 Ga0207658_10000559 Ga0207658_1000055926 684
110 3300026023 Ga0207677_10022682 Ga0207677_100226823 684
111 3300026035 Ga0207703_10002776 Ga0207703_1000277612 684
112 3300026041 Ga0207639_10010108 Ga0207639_100101082 684
113 3300026088 Ga0207641_10005110 Ga0207641_100051107 684
114 3300026089 Ga0207648_10008865 Ga0207648_100088657 684
115 3300026118 Ga0207675_100017345 Ga0207675_1000173452 684
116 3300026121 Ga0207683_10004935 Ga0207683_1000493510 684
117 3300028379 Ga0268266_10003264 Ga0268266_1000326413 684
118 3300028381 Ga0268264_10001833 Ga0268264_1000183310 684
119 3300028381 Ga0268264_10048378 Ga0268264_100483783 684
120 3300048912 Ga0496109_0014257 Ga0496109_0014257_4670_6799 684
121 3300005290 Ga0065712_10005910 Ga0065712_100059104 685
122 3300005290 Ga0065712_10093771 Ga0065712_100937711 685
123 3300005331 Ga0070670_100015158 Ga0070670_1000151584 685
124 3300005331 Ga0070670_100089978 Ga0070670_1000899782 685
125 3300005337 Ga0070682_100000280 Ga0070682_10000028016 685
126 3300005347 Ga0070668_100002566 Ga0070668_1000025666 685
127 3300005355 Ga0070671_100058797 Ga0070671_1000587972 685
128 3300005356 Ga0070674_100027573 Ga0070674_1000275732 685
129 3300005364 Ga0070673_100063712 Ga0070673_1000637121 685
130 3300005457 Ga0070662_100013808 Ga0070662_1000138082 685
131 3300005471 Ga0070698_100009763 Ga0070698_1000097633 685
132 3300005530 Ga0070679_100001119 Ga0070679_10000111916 685
133 3300005543 Ga0070672_100003451 Ga0070672_1000034514 685
134 3300005543 Ga0070672_100007301 Ga0070672_1000073015 685
135 3300005548 Ga0070665_100141404 Ga0070665_1001414042 685
136 3300005577 Ga0068857_100058617 Ga0068857_1000586172 685
137 3300005578 Ga0068854_100073026 Ga0068854_1000730261 685
138 3300005616 Ga0068852_100084178 Ga0068852_1000841782 685
139 3300005617 Ga0068859_100011389 Ga0068859_1000113894 685
140 3300005719 Ga0068861_100007552 Ga0068861_1000075526 685
141 3300005834 Ga0068851_10006758 Ga0068851_100067584 685
142 3300005840 Ga0068870_10011417 Ga0068870_100114172 685
143 3300005841 Ga0068863_100095994 Ga0068863_1000959941 685
144 3300005843 Ga0068860_100075937 Ga0068860_1000759372 685
145 3300005844 Ga0068862_100012837 Ga0068862_1000128374 685
146 3300006237 Ga0097621_100061612 Ga0097621_1000616122 685
147 3300006358 Ga0068871_100000427 Ga0068871_10000042723 685
148 3300006846 Ga0075430_100004146 Ga0075430_1000041464 685
149 3300006846 Ga0075430_100071465 Ga0075430_1000714652 685
150 3300006847 Ga0075431_100009511 Ga0075431_1000095113 685
151 3300006880 Ga0075429_100007161 Ga0075429_1000071615 685
152 3300006880 Ga0075429_100043716 Ga0075429_1000437162 685
153 3300006881 Ga0068865_100068308 Ga0068865_1000683081 685
154 3300006931 Ga0097620_100011388 Ga0097620_1000113884 685
155 3300009093 Ga0105240_10001681 Ga0105240_1000168139 685
156 3300009094 Ga0111539_10020494 Ga0111539_100204946 685
157 3300009101 Ga0105247_10000640 Ga0105247_100006405 685
158 3300009177 Ga0105248_10093227 Ga0105248_100932272 685
159 3300009553 Ga0105249_10006202 Ga0105249_100062026 685
160 3300009553 Ga0105249_10039468 Ga0105249_100394684 685
161 3300010375 Ga0105239_10060953 Ga0105239_100609532 685
162 3300013102 Ga0157371_10002214 Ga0157371_1000221419 685
163 3300013104 Ga0157370_10020914 Ga0157370_100209145 685
164 3300013306 Ga0163162_10000531 Ga0163162_1000053131 685
165 3300013306 Ga0163162_10069478 Ga0163162_100694783 685
166 3300013307 Ga0157372_10036276 Ga0157372_100362762 685
167 3300013307 Ga0157372_10100452 Ga0157372_101004521 685
168 3300013307 Ga0157372_10110424 Ga0157372_101104242 685
169 3300013308 Ga0157375_10000230 Ga0157375_1000023035 685
170 3300014325 Ga0163163_10000141 Ga0163163_1000014124 685
171 3300014325 Ga0163163_10004300 Ga0163163_100043005 685
172 3300014969 Ga0157376_10004496 Ga0157376_100044965 685
173 3300025900 Ga0207710_10001856 Ga0207710_100018566 685
174 3300025904 Ga0207647_10001743 Ga0207647_1000174316 685
175 3300025908 Ga0207643_10003365 Ga0207643_100033652 685
176 3300025912 Ga0207707_10000297 Ga0207707_1000029717 685
177 3300025913 Ga0207695_10002237 Ga0207695_1000223721 685
178 3300025913 Ga0207695_10013040 Ga0207695_100130403 685
179 3300025917 Ga0207660_10000959 Ga0207660_1000095913 685
180 3300025918 Ga0207662_10009304 Ga0207662_100093045 685
181 3300025921 Ga0207652_10006409 Ga0207652_100064099 685
182 3300025923 Ga0207681_10029252 Ga0207681_100292522 685
183 3300025925 Ga0207650_10003184 Ga0207650_100031849 685
184 3300025925 Ga0207650_10008971 Ga0207650_100089715 685
185 3300025932 Ga0207690_10009356 Ga0207690_100093565 685
186 3300025933 Ga0207706_10010946 Ga0207706_100109466 685
187 3300025934 Ga0207686_10002182 Ga0207686_100021826 685
188 3300025936 Ga0207670_10006710 Ga0207670_100067101 685
189 3300025936 Ga0207670_10024975 Ga0207670_100249752 685
190 3300025940 Ga0207691_10007835 Ga0207691_100078357 685
191 3300025940 Ga0207691_10012061 Ga0207691_100120616 685
192 3300025940 Ga0207691_10043805 Ga0207691_100438053 685
193 3300025942 Ga0207689_10006997 Ga0207689_100069975 685
194 3300025945 Ga0207679_10012325 Ga0207679_100123252 685
195 3300025949 Ga0207667_10043557 Ga0207667_100435576 685
196 3300025961 Ga0207712_10003040 Ga0207712_100030407 685
197 3300025961 Ga0207712_10024346 Ga0207712_100243462 685
198 3300026088 Ga0207641_10000418 Ga0207641_1000041845 685
199 3300026088 Ga0207641_10074929 Ga0207641_100749292 685
200 3300026095 Ga0207676_10045364 Ga0207676_100453642 685
201 3300026116 Ga0207674_10013376 Ga0207674_100133766 685
202 3300026116 Ga0207674_10079275 Ga0207674_100792752 685
203 3300026118 Ga0207675_100009615 Ga0207675_1000096153 685
204 3300026121 Ga0207683_10027946 Ga0207683_100279465 685
205 3300026121 Ga0207683_10047271 Ga0207683_100472711 685
206 3300026142 Ga0207698_10090422 Ga0207698_100904222 685
207 3300031616 Ga0307508_10012017 Ga0307508_100120175 685
208 3300031730 Ga0307516_10002348 Ga0307516_1000234810 685
209 3300037471 Ga0395905_0003301 Ga0395905_0003301_6531_8618 685
210 3300046499 Ga0495594_0028100 Ga0495594_0028100_893_2992 685
211 3300047320 Ga0495672_0008890 Ga0495672_0008890_248_2338 685
212 3300049568 Ga0501031_0009582 Ga0501031_0009582_1714_3813 685
213 3300049571 Ga0501034_0074106 Ga0501034_0074106_713_2812 685
214 3300049572 Ga0501036_0005293 Ga0501036_0005293_2010_4109 685
215 3300049822 Ga0501035_0033211 Ga0501035_0033211_1867_3966 685
216 3300049823 Ga0501044_0042300 Ga0501044_0042300_2049_4148 685
217 3300050508 nmdc:mga09592_23126_c1 nmdc:mga09592_23126_c1_1546_3645 685
218 3300050509 nmdc:mga0qj67_20959_c1 nmdc:mga0qj67_20959_c1_2227_4326 685
219 3300050510 nmdc:mga06r32_34050_c1 nmdc:mga06r32_34050_c1_683_2782 685
220 3300053139 Ga0500568_0004581 Ga0500568_0004581_4921_7011 685
221 3300003323 rootH1_10120895 rootH1_101208952 686
222 3300003354 JGI25160J50197_1000740 JGI25160J50197_10007403 686
223 3300005548 Ga0070665_100000031 Ga0070665_100000031236 686
224 3300005719 Ga0068861_100011869 Ga0068861_1000118695 686
225 3300005843 Ga0068860_100000072 Ga0068860_10000007248 686
226 3300005844 Ga0068862_100067067 Ga0068862_1000670672 686
227 3300009093 Ga0105240_10000319 Ga0105240_1000031958 686
228 3300009174 Ga0105241_10001657 Ga0105241_1000165711 686
229 3300009545 Ga0105237_10092715 Ga0105237_100927152 686
230 3300009551 Ga0105238_10000788 Ga0105238_1000078810 686
231 3300014326 Ga0157380_10049082 Ga0157380_100490821 686
232 3300021384 Ga0213876_10003392 Ga0213876_100033928 686
233 3300025302 Ga0207426_1000019 Ga0207426_1000019340 686
234 3300025942 Ga0207689_10005524 Ga0207689_100055248 686
235 3300028379 Ga0268266_10000088 Ga0268266_10000088129 686
236 3300028381 Ga0268264_10000201 Ga0268264_1000020148 686
237 3300028381 Ga0268264_10016880 Ga0268264_100168803 686
238 3300028786 Ga0307517_10000658 Ga0307517_1000065832 686
239 3300039437 Ga0436365_1622828 Ga0436365_1622828_6344_8437 686
240 3300042014 Ga0439457_002291 Ga0439457_002291_481_2571 686
241 3300044658 Ga0466972_0004878 Ga0466972_0004878_1280_3430 686
242 3300049573 Ga0501037_0025375 Ga0501037_0025375_479_2602 686
243 3300049579 Ga0501043_0038675 Ga0501043_0038675_1512_3635 686
244 3300049823 Ga0501044_0008160 Ga0501044_0008160_4880_7003 686
245 iso_pu_bacteria 2896109856 2896110738 686
246 3300028794 Ga0307515_10003094 Ga0307515_100030946 687
247 3300046507 Ga0495606_0006738 Ga0495606_0006738_5972_8119 687
248 3300053090 Ga0500646_0005450 Ga0500646_0005450_273_2486 687
249 iso_pu_bacteria 2896085136 2896089089 687
250 3300025904 Ga0207647_10005816 Ga0207647_100058167 688
251 3300042004 Ga0439445_0001677 Ga0439445_0001677_1604_3784 688
252 3300047472 Ga0495686_0001217 Ga0495686_0001217_27410_29488 688
253 3300009093 Ga0105240_10000066 Ga0105240_10000066191 689
254 3300010375 Ga0105239_10002085 Ga0105239_1000208518 689
255 3300025913 Ga0207695_10000078 Ga0207695_1000007856 689
256 3300028379 Ga0268266_10032431 Ga0268266_100324313 689
257 3300031251 Ga0265327_10003103 Ga0265327_1000310313 689
258 3300037471 Ga0395905_0053871 Ga0395905_0053871_483_2552 689
259 3300046616 Ga0495668_0000235 Ga0495668_0000235_37916_39997 689
260 3300048917 Ga0496114_0000170 Ga0496114_0000170_40491_42566 689
261 3300053153 Ga0500616_0001355 Ga0500616_0001355_10530_12611 689
262 2162886007 SwRhRL2b_contig_677025 SwRhRL2b_0927.00001450 690
263 3300005289 Ga0065704_10070133 Ga0065704_10070133346 690

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13090

PP_kinase_C

Polyphosphate kinase C-terminal domain 2

509

680

0.99

PF17941

PP_kinase_C_1

Polyphosphate kinase C-terminal domain 1

333

499

0.98

PF02503

PP_kinase

Polyphosphate kinase middle domain

124

308

0.95

PF13089

PP_kinase_N

Polyphosphate kinase N-terminal domain

9

116

0.89

PF13091

PLDc_2

PLD-like domain

355

493

0.89

PF13091

PLDc_2

PLD-like domain

524

650

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xdo-assembly1.cif.gz_A crystal structure of escherichia coli polyphosphate kinase 0.8528 4 686
1xdo-assembly1.cif.gz_A crystal structure of escherichia coli polyphosphate kinase 0.8435 4 686
2o8r-assembly1.cif.gz_A crystal structure of polyphosphate kinase from porphyromonas gingivalis 0.8346 5 686
2o8r-assembly1.cif.gz_A crystal structure of polyphosphate kinase from porphyromonas gingivalis 0.8256 5 686
2o8r-assembly1.cif.gz_B crystal structure of polyphosphate kinase from porphyromonas gingivalis 0.8155 11 686
ID Description Score Start End Superfamily
1xdoA04 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.954 505 690 3.30.870.10
af_Q54BM7_688_868_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9537 331 497 3.30.870.10
1xdoA03 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9408 317 491 3.30.870.10
1xdoA04 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.939 505 690 3.30.870.10
af_Q54BM7_872_1047_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9341 510 689 3.30.870.10
ID Description Score Start End GO Terms
AF-A0A0M3CIM8-F1-model_v4 deleted 0.9941 513 686
AF-A0A4Q3RX12-F1-model_v4 Polyphosphate kinase 1 0.9899 413 686 GO:0006799
GO:0008976
GO:0009358
AF-A0A6I0E4H0-F1-model_v4 Polyphosphate kinase 1 0.9801 370 686 GO:0006799
GO:0008976
GO:0009358
AF-A0A2N5AM61-F1-model_v4 RNA degradosome polyphosphate kinase 0.9786 518 686 GO:0006799
GO:0008976
GO:0009358
AF-A0A136PFJ1-F1-model_v4 deleted 0.977 331 686

Feature Viewer

pLDDT pTM Quality
88.27 0.87 High
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Predicted Structure (AlphaFold2)

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