F372134

General Info

Members Datasets Scaffolds Average Seq Length
263 186 254 282

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0033075|Ga0496104_0033075_838_1800
Length 320
Sequence MAVKLASAATHRVHPGTVRTAFANSNSTAEKESMTATIAAQRSSTQFNTDRTYPGLWTITFNNPPINMFIPATIVELGALMTDLEADPSVKVVVFQSANPDFFIAHLDVAKAAERPEALGLWRDFVLRLSSTAVVSIAKIRGRTRGIGNEFVLACDMRFASRENALFGNPEVGVGLVPGGGALEWLPRLVGRSRALEIVLSGDDFDADIAERYGWVNRTLDDDDLDSFVDTLARRLASFDRETLGAAKAQVNRFGTPTAAELQSSNDLFFPLLALPSAQARRAKVRNIGYGIRSDFELNFGRYLPSFGRTDDDNAVTQPY

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
3 2593339239 Luteibacter sp. UNCMF331Sha3.1 Isolate Unclassified
4 2643221584 Caulobacter sp. Root656 Isolate Unclassified
5 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
6 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
7 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
8 2919404418 Luteibacter sp. 3190 Isolate Unclassified
9 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
10 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
15 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
16 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
17 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
20 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
21 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
22 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
23 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
52 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
53 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
54 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
55 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
56 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
60 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
62 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028023 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300030763 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
90 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
92 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
93 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
94 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
95 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
96 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
97 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
104 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
105 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
106 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
107 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
108 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
109 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
114 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
115 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
116 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
117 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
120 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
121 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
122 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
123 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
124 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
125 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
126 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
127 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
128 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
129 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
130 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
131 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
132 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
133 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
137 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
138 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
139 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
140 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
141 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
142 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
143 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
144 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
145 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
146 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
147 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
148 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
149 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
150 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
151 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
152 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
153 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
154 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
155 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
156 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
157 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
158 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
159 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
160 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
161 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
162 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
163 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
164 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
165 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
166 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
167 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
168 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
169 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
170 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
171 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
172 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
173 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
174 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
175 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
178 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
179 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
180 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
181 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
182 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
183 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
184 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
185 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
186 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.44
Metatranscriptomes 1.14
Isolates 3.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.84
Nodule 0
Rhizoplane 6.08
Rhizosphere 78.33
Stem 0
Stem Tuber 0
Unclassified 8.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10162880 3300003316 Bacteria 2309
2 rootH2_10076171 3300003320 Bacteria 2616
3 rootL2_10075891 3300003322 Bacteria 12061
4 rootL2_10154724 3300003322 Bacteria 5009
5 rootH1_10117503 3300003323 Bacteria 7972
6 Ga0055527_1000203 3300003760 Bacteria 39021
7 Ga0055535_1000432 3300003761 Bacteria 39021
8 Ga0055542_1000437 3300003762 Bacteria 39859
9 Ga0055529_1000634 3300003763 Bacteria 25940
10 Ga0065165_1000312 3300005262 Bacteria 79663
11 Ga0070690_100026851 3300005330 Bacteria 3555
12 Ga0070670_100057736 3300005331 Bacteria 3331
13 Ga0068869_100411660 3300005334 Bacteria 1114
14 Ga0070666_10028026 3300005335 Bacteria 3694
15 Ga0070666_10030261 3300005335 Bacteria 3565
16 Ga0070682_100004536 3300005337 Bacteria 7715
17 Ga0070667_100077130 3300005367 Bacteria 2845
18 Ga0070667_100517831 3300005367 Bacteria 1094
19 Ga0070714_100000638 3300005435 Bacteria 24952
20 Ga0070706_100122196 3300005467 Bacteria 2427
21 Ga0068859_100017149 3300005617 Bacteria 7272
22 Ga0068859_100017319 3300005617 Bacteria 7236
23 Ga0068859_100258977 3300005617 Bacteria 1830
24 Ga0068864_100000698 3300005618 Bacteria 28165
25 Ga0068864_100632875 3300005618 Bacteria 1040
26 Ga0068858_100011405 3300005842 Bacteria 8391
27 Ga0068858_100142517 3300005842 Bacteria 2250
28 Ga0068860_100025989 3300005843 Bacteria 5648
29 Ga0068860_100123015 3300005843 Bacteria 2486
30 Ga0068862_100040140 3300005844 Bacteria 3978
31 Ga0097621_100000666 3300006237 Bacteria 24162
32 Ga0097621_100407977 3300006237 Bacteria 1217
33 Ga0068871_100001336 3300006358 Bacteria 16502
34 Ga0068871_100133613 3300006358 Bacteria 2105
35 Ga0075428_100204820 3300006844 Bacteria 2132
36 Ga0075436_100285236 3300006914 Bacteria 1181
37 Ga0097620_100017150 3300006931 Bacteria 7272
38 Ga0097620_100017320 3300006931 Bacteria 7236
39 Ga0097620_100258980 3300006931 Bacteria 1830
40 Ga0105251_10023480 3300009011 Bacteria 3182
41 Ga0105240_10000060 3300009093 Bacteria 219839
42 Ga0105240_10001672 3300009093 Bacteria 37648
43 Ga0105240_10066475 3300009093 Bacteria 4472
44 Ga0105240_10214666 3300009093 Bacteria 2245
45 Ga0105245_10100068 3300009098 Bacteria 2681
46 Ga0105247_10002034 3300009101 Bacteria 14009
47 Ga0105247_10008475 3300009101 Bacteria 6262
48 Ga0105247_10023510 3300009101 Bacteria 3713
49 Ga0105248_10000505 3300009177 Bacteria 44403
50 Ga0105248_11149784 3300009177 Bacteria 877
51 Ga0105237_10000430 3300009545 Bacteria 59639
52 Ga0105237_10009953 3300009545 Bacteria 10144
53 Ga0105238_10099047 3300009551 Bacteria 2898
54 Ga0105238_10275545 3300009551 Bacteria 1663
55 Ga0105239_10033026 3300010375 Bacteria 5684
56 Ga0157374_10580585 3300013296 Bacteria 1130
57 Ga0163162_10013501 3300013306 Bacteria 7974
58 Ga0163162_10156131 3300013306 Bacteria 2402
59 Ga0163162_10396334 3300013306 Bacteria 1513
60 Ga0157375_10075956 3300013308 Bacteria 3385
61 Ga0163163_10000048 3300014325 Bacteria 130746
62 Ga0163163_10000664 3300014325 Bacteria 29497
63 Ga0163163_10007257 3300014325 Bacteria 9771
64 Ga0157379_10122901 3300014968 Bacteria 2336
65 Ga0157376_10148553 3300014969 Bacteria 2111
66 Ga0182006_1000254 3300015261 Bacteria 49364
67 Ga0182005_1025496 3300015265 Bacteria 1614
68 Ga0183373_1001 3300015682 Bacteria 1410374
69 Ga0183368_1004 3300015687 Bacteria 1211761
70 Ga0163161_10012848 3300017792 Bacteria 5817
71 Ga0209672_100048 3300025228 Bacteria 240458
72 Ga0209258_100086 3300025242 Bacteria 240458
73 Ga0209148_1000095 3300025254 Bacteria 240458
74 Ga0209129_1000895 3300025258 Bacteria 18274
75 Ga0209455_1000087 3300025272 Bacteria 240458
76 Ga0209758_1008537 3300025297 Bacteria 6601
77 Ga0209256_1006576 3300025299 Bacteria 6094
78 Ga0207710_10023154 3300025900 Bacteria 2668
79 Ga0207710_10052094 3300025900 Bacteria 1840
80 Ga0207695_10000025 3300025913 Bacteria 627211
81 Ga0207695_10001549 3300025913 Bacteria 37807
82 Ga0207695_10049463 3300025913 Bacteria 4430
83 Ga0207695_10157230 3300025913 Bacteria 2207
84 Ga0207671_10000523 3300025914 Bacteria 51846
85 Ga0207663_10234167 3300025916 Bacteria 1343
86 Ga0207663_10309789 3300025916 Bacteria 1183
87 Ga0207662_10109339 3300025918 Bacteria 1722
88 Ga0207652_10121548 3300025921 Bacteria 2324
89 Ga0207646_10075197 3300025922 Bacteria 3018
90 Ga0207694_10075949 3300025924 Bacteria 2631
91 Ga0207650_10082393 3300025925 Bacteria 2442
92 Ga0207644_10285862 3300025931 Bacteria 1325
93 Ga0207706_10138196 3300025933 Bacteria 2143
94 Ga0207686_10007508 3300025934 Bacteria 5869
95 Ga0207711_10000098 3300025941 Bacteria 92296
96 Ga0207711_10530955 3300025941 Bacteria 1097
97 Ga0207661_10149509 3300025944 Bacteria 2018
98 Ga0207679_10468219 3300025945 Bacteria 1120
99 Ga0207712_10003095 3300025961 Bacteria 10617
100 Ga0207658_10026519 3300025986 Bacteria 4063
101 Ga0207677_10039559 3300026023 Bacteria 3102
102 Ga0207703_10008929 3300026035 Bacteria 7895
103 Ga0207703_10045732 3300026035 Bacteria 3522
104 Ga0207678_10296246 3300026067 Bacteria 1390
105 Ga0207641_10592557 3300026088 Bacteria 1084
106 Ga0207676_10004763 3300026095 Bacteria 9624
107 Ga0207676_10378740 3300026095 Bacteria 1316
108 Ga0207698_10276491 3300026142 Bacteria 1551
109 Ga0265357_1000389 3300028023 Bacteria 2468
110 Ga0268265_10050370 3300028380 Bacteria 3137
111 Ga0265338_10000096 3300028800 Bacteria 164859
112 Ga0265338_10002296 3300028800 Bacteria 29084
113 Ga0265338_10003786 3300028800 Bacteria 21029
114 Ga0265338_10058058 3300028800 Bacteria 3419
115 Ga0265763_1008050 3300030763 Bacteria 935
116 Ga0265770_1002517 3300030878 Bacteria 2485
117 Ga0265760_10008620 3300031090 Bacteria 2913
118 Ga0265320_10000151 3300031240 Bacteria 57818
119 Ga0265325_10008573 3300031241 Bacteria 6025
120 Ga0265339_10132825 3300031249 Bacteria 1271
121 Ga0265331_10008988 3300031250 Bacteria 5645
122 Ga0265316_10104969 3300031344 Bacteria 2144
123 Ga0265316_10152284 3300031344 Bacteria 1732
124 Ga0265313_10000583 3300031595 Bacteria 38024
125 Ga0265314_10001178 3300031711 Bacteria 30013
126 Ga0265342_10205593 3300031712 Bacteria 1067
127 Ga0307405_10000008 3300031731 Bacteria 264953
128 Ga0307407_10000037 3300031903 Bacteria 71023
129 Ga0307416_100000048 3300032002 Bacteria 120194
130 Ga0373949_0047427 3300035090 Bacteria 1074
131 Ga0373954_0005355 3300035118 Bacteria 5543
132 Ga0373946_0021099 3300035171 Bacteria 2523
133 Ga0373955_0004854 3300035172 Bacteria 5995
134 Ga0373924_0065726 3300035410 Bacteria 1523
135 Ga0373927_0066082 3300035695 Bacteria 2339
136 Ga0373927_0134014 3300035695 Bacteria 1619
137 Ga0373933_0003562 3300035724 Bacteria 8651
138 Ga0373937_0018280 3300036401 Bacteria 6256
139 Ga0373937_0045591 3300036401 Bacteria 4007
140 Ga0373937_0065559 3300036401 Bacteria 3343
141 Ga0395905_0068550 3300037471 Bacteria 3322
142 Ga0436364_0660691 3300037853 Bacteria 1317
143 Ga0436364_1484921 3300037853 Bacteria 2655
144 Ga0436365_1270512 3300039437 Bacteria 895
145 Ga0436361_0366806 3300039447 Bacteria 1123
146 Ga0436361_1106425 3300039447 Bacteria 1064
147 Ga0436363_1273370 3300039450 Bacteria 1102
148 Ga0436362_0638793 3300039453 Bacteria 2107
149 Ga0466957_0014575 3300044842 Unclassified 4579
150 Ga0451576_0842751 3300045051 Bacteria 962
151 Ga0495592_0036960 3300046454 Bacteria 3676
152 Ga0495592_0039871 3300046454 Bacteria 3527
153 Ga0495638_0001098 3300046460 Bacteria 26384
154 Ga0495641_0068797 3300046461 Bacteria 1592
155 Ga0495651_0016512 3300046462 Bacteria 5719
156 Ga0495653_0002070 3300046463 Bacteria 15773
157 Ga0495653_0011441 3300046463 Bacteria 7253
158 Ga0495653_0103254 3300046463 Bacteria 2062
159 Ga0495650_0000007 3300046471 Bacteria 718072
160 Ga0495650_0040475 3300046471 Bacteria 2000
161 Ga0495664_0004911 3300046477 Bacteria 7316
162 Ga0495664_0049952 3300046477 Bacteria 2483
163 Ga0495616_0000044 3300046513 Bacteria 117255
164 Ga0495618_0040661 3300046514 Bacteria 2927
165 Ga0495618_0078641 3300046514 Bacteria 2102
166 Ga0495620_0063259 3300046515 Bacteria 1535
167 Ga0495628_0009303 3300046516 Bacteria 8395
168 Ga0495628_0073467 3300046516 Bacteria 2664
169 Ga0495630_0000561 3300046517 Bacteria 27052
170 Ga0495630_0115682 3300046517 Bacteria 2032
171 Ga0495652_0010023 3300046529 Bacteria 8586
172 Ga0495652_0045332 3300046529 Bacteria 3781
173 Ga0495654_0000053 3300046530 Bacteria 145014
174 Ga0495587_0001524 3300046536 Bacteria 15406
175 Ga0495587_0052194 3300046536 Bacteria 2413
176 Ga0495645_0006956 3300046543 Bacteria 7861
177 Ga0495645_0035554 3300046543 Bacteria 3631
178 Ga0495645_0102451 3300046543 Bacteria 2034
179 Ga0495667_0005103 3300046559 Bacteria 8870
180 Ga0495667_0025639 3300046559 Bacteria 3972
181 Ga0495634_0018683 3300046642 Bacteria 4932
182 Ga0495634_0098528 3300046642 Bacteria 1891
183 Ga0495625_0004788 3300046660 Bacteria 12657
184 Ga0495625_0058418 3300046660 Bacteria 2741
185 Ga0495635_0005960 3300046663 Bacteria 8502
186 Ga0495657_0009144 3300046675 Bacteria 7527
187 Ga0495657_0031451 3300046675 Bacteria 3710
188 Ga0495623_0001294 3300046679 Bacteria 16987
189 Ga0495646_0080031 3300046680 Bacteria 1906
190 Ga0495658_0040871 3300046683 Bacteria 2580
191 Ga0495613_0004446 3300046689 Bacteria 10502
192 Ga0495613_0078235 3300046689 Bacteria 2406
193 Ga0495600_0008267 3300046809 Bacteria 6388
194 Ga0495600_0010780 3300046809 Bacteria 5682
195 Ga0495600_0241200 3300046809 Bacteria 1152
196 Ga0495581_0128250 3300047315 Bacteria 1478
197 Ga0495604_0016287 3300047317 Bacteria 5940
198 Ga0495604_0033042 3300047317 Bacteria 4096
199 Ga0495604_0064649 3300047317 Bacteria 2787
200 Ga0495636_0000409 3300047318 Bacteria 15972
201 Ga0495674_0007997 3300047319 Bacteria 10094
202 Ga0495674_0025264 3300047319 Bacteria 5449
203 Ga0495674_0035803 3300047319 Bacteria 4475
204 Ga0495676_0017092 3300047321 Bacteria 6419
205 Ga0495680_0001745 3300047322 Bacteria 23075
206 Ga0495680_0043197 3300047322 Bacteria 3570
207 Ga0495680_0067555 3300047322 Bacteria 2733
208 Ga0495675_0000161 3300047444 Bacteria 47741
209 Ga0495675_0004269 3300047444 Bacteria 8645
210 Ga0495675_0032992 3300047444 Bacteria 3304
211 Ga0495684_0003025 3300047471 Bacteria 13231
212 Ga0495684_0006550 3300047471 Bacteria 9035
213 Ga0495684_0132135 3300047471 Bacteria 1874
214 Ga0495593_0092232 3300047673 Bacteria 1559
215 Ga0495602_0001591 3300048088 Bacteria 22579
216 Ga0495602_0012903 3300048088 Bacteria 8562
217 Ga0495602_0064750 3300048088 Bacteria 3158
218 Ga0495602_0103997 3300048088 Bacteria 2324
219 Ga0496100_0053143 3300048903 Bacteria 2637
220 Ga0496101_0000701 3300048904 Bacteria 20112
221 Ga0496102_0557851 3300048905 Bacteria 1068
222 Ga0496103_0073476 3300048906 Bacteria 2142
223 Ga0496104_0033075 3300048907 Bacteria 4814
224 Ga0496104_0151110 3300048907 Bacteria 2229
225 Ga0496104_0211257 3300048907 Bacteria 1852
226 Ga0496105_0249000 3300048908 Bacteria 1440
227 Ga0496107_0060218 3300048910 Bacteria 2748
228 Ga0496107_0191740 3300048910 Bacteria 1518
229 Ga0496108_0005172 3300048911 Bacteria 10552
230 Ga0496109_0151822 3300048912 Bacteria 2169
231 Ga0496112_0007962 3300048915 Bacteria 9451
232 Ga0496113_0197278 3300048916 Bacteria 1599
233 Ga0496114_0000664 3300048917 Bacteria 25510
234 Ga0496115_0009723 3300048918 Bacteria 7162
235 Ga0496116_0000452 3300048919 Bacteria 57179
236 Ga0496116_0000938 3300048919 Bacteria 35907
237 Ga0496117_0000023 3300048920 Bacteria 438585
238 Ga0496118_0000564 3300048921 Bacteria 61236
239 Ga0496119_0000010 3300048922 Bacteria 438534
240 Ga0496122_0000166 3300048925 Bacteria 157284
241 Ga0496123_0068159 3300048926 Bacteria 2242
242 Ga0496124_0007084 3300048927 Bacteria 12014
243 Ga0496125_0000675 3300048928 Bacteria 56932
244 nmdc:mga05p37_39721_c1 3300050507 Bacteria 5778
245 nmdc:mga08x19_152757_c1 3300050514 Bacteria 1564
246 Ga0495601_0015650 3300053077 Bacteria 4585
247 Ga0495595_0004431 3300053084 Bacteria 5650
248 Ga0495619_0003375 3300053085 Bacteria 10323
249 Ga0500554_001489 3300053102 Bacteria 4525
250 Ga0500614_006601 3300053123 Bacteria 2438
251 Ga0500618_005478 3300053125 Bacteria 3850
252 Ga0500616_0007001 3300053153 Bacteria 7252
253 Ga0500622_0022203 3300053156 Bacteria 3366
254 Ga0500627_0062499 3300053158 Bacteria 1640

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025921 Ga0207652_10121548 Ga0207652_101215482 228
2 3300046515 Ga0495620_0063259 Ga0495620_0063259_641_1348 229
3 3300046543 Ga0495645_0102451 Ga0495645_0102451_943_1785 241
4 3300025258 Ga0209129_1000895 Ga0209129_10008954 258
5 3300025297 Ga0209758_1008537 Ga0209758_10085375 258
6 3300009093 Ga0105240_10066475 Ga0105240_100664755 259
7 3300015265 Ga0182005_1025496 Ga0182005_10254961 259
8 3300025299 Ga0209256_1006576 Ga0209256_10065763 259
9 3300025913 Ga0207695_10049463 Ga0207695_100494635 259
10 iso_pu_bacteria 2593339239 2595449417 259
11 iso_pu_bacteria 2919404418 2919405934 259
12 3300003760 Ga0055527_1000203 Ga0055527_100020332 260
13 3300003761 Ga0055535_1000432 Ga0055535_10004327 260
14 3300003762 Ga0055542_1000437 Ga0055542_100043732 260
15 3300003763 Ga0055529_1000634 Ga0055529_10006347 260
16 3300005330 Ga0070690_100026851 Ga0070690_1000268512 260
17 3300005331 Ga0070670_100057736 Ga0070670_1000577362 260
18 3300005334 Ga0068869_100411660 Ga0068869_1004116601 260
19 3300005335 Ga0070666_10028026 Ga0070666_100280263 260
20 3300005335 Ga0070666_10030261 Ga0070666_100302611 260
21 3300005367 Ga0070667_100077130 Ga0070667_1000771302 260
22 3300005435 Ga0070714_100000638 Ga0070714_10000063826 260
23 3300005467 Ga0070706_100122196 Ga0070706_1001221962 260
24 3300005617 Ga0068859_100017149 Ga0068859_1000171494 260
25 3300005617 Ga0068859_100017319 Ga0068859_1000173197 260
26 3300005617 Ga0068859_100258977 Ga0068859_1002589772 260
27 3300005618 Ga0068864_100000698 Ga0068864_10000069812 260
28 3300005618 Ga0068864_100632875 Ga0068864_1006328751 260
29 3300005842 Ga0068858_100011405 Ga0068858_1000114055 260
30 3300005842 Ga0068858_100142517 Ga0068858_1001425171 260
31 3300005843 Ga0068860_100025989 Ga0068860_1000259893 260
32 3300005843 Ga0068860_100123015 Ga0068860_1001230152 260
33 3300005844 Ga0068862_100040140 Ga0068862_1000401402 260
34 3300006237 Ga0097621_100000666 Ga0097621_10000066622 260
35 3300006237 Ga0097621_100407977 Ga0097621_1004079771 260
36 3300006358 Ga0068871_100001336 Ga0068871_10000133611 260
37 3300006358 Ga0068871_100133613 Ga0068871_1001336132 260
38 3300006844 Ga0075428_100204820 Ga0075428_1002048201 260
39 3300006914 Ga0075436_100285236 Ga0075436_1002852361 260
40 3300006931 Ga0097620_100017150 Ga0097620_1000171504 260
41 3300006931 Ga0097620_100017320 Ga0097620_1000173203 260
42 3300006931 Ga0097620_100258980 Ga0097620_1002589802 260
43 3300009093 Ga0105240_10000060 Ga0105240_10000060152 260
44 3300009093 Ga0105240_10001672 Ga0105240_100016726 260
45 3300009093 Ga0105240_10214666 Ga0105240_102146662 260
46 3300009098 Ga0105245_10100068 Ga0105245_101000682 260
47 3300009101 Ga0105247_10002034 Ga0105247_1000203410 260
48 3300009101 Ga0105247_10008475 Ga0105247_100084757 260
49 3300009101 Ga0105247_10023510 Ga0105247_100235102 260
50 3300009177 Ga0105248_10000505 Ga0105248_1000050525 260
51 3300009177 Ga0105248_11149784 Ga0105248_111497841 260
52 3300009545 Ga0105237_10000430 Ga0105237_1000043018 260
53 3300009545 Ga0105237_10009953 Ga0105237_100099533 260
54 3300009551 Ga0105238_10099047 Ga0105238_100990471 260
55 3300009551 Ga0105238_10275545 Ga0105238_102755452 260
56 3300010375 Ga0105239_10033026 Ga0105239_100330264 260
57 3300013296 Ga0157374_10580585 Ga0157374_105805851 260
58 3300013306 Ga0163162_10013501 Ga0163162_100135017 260
59 3300013306 Ga0163162_10156131 Ga0163162_101561313 260
60 3300013306 Ga0163162_10396334 Ga0163162_103963342 260
61 3300013308 Ga0157375_10075956 Ga0157375_100759563 260
62 3300014325 Ga0163163_10000048 Ga0163163_1000004829 260
63 3300014325 Ga0163163_10000664 Ga0163163_1000066417 260
64 3300014325 Ga0163163_10007257 Ga0163163_100072572 260
65 3300014968 Ga0157379_10122901 Ga0157379_101229012 260
66 3300014969 Ga0157376_10148553 Ga0157376_101485532 260
67 3300015687 Ga0183368_1004 Ga0183368_1004677 260
68 3300017792 Ga0163161_10012848 Ga0163161_100128482 260
69 3300025228 Ga0209672_100048 Ga0209672_10004832 260
70 3300025242 Ga0209258_100086 Ga0209258_10008632 260
71 3300025254 Ga0209148_1000095 Ga0209148_100009532 260
72 3300025272 Ga0209455_1000087 Ga0209455_100008732 260
73 3300025900 Ga0207710_10023154 Ga0207710_100231542 260
74 3300025900 Ga0207710_10052094 Ga0207710_100520942 260
75 3300025913 Ga0207695_10000025 Ga0207695_1000002549 260
76 3300025913 Ga0207695_10001549 Ga0207695_1000154931 260
77 3300025913 Ga0207695_10157230 Ga0207695_101572302 260
78 3300025914 Ga0207671_10000523 Ga0207671_1000052329 260
79 3300025916 Ga0207663_10234167 Ga0207663_102341672 260
80 3300025916 Ga0207663_10309789 Ga0207663_103097892 260
81 3300025918 Ga0207662_10109339 Ga0207662_101093392 260
82 3300025922 Ga0207646_10075197 Ga0207646_100751973 260
83 3300025924 Ga0207694_10075949 Ga0207694_100759494 260
84 3300025925 Ga0207650_10082393 Ga0207650_100823932 260
85 3300025931 Ga0207644_10285862 Ga0207644_102858621 260
86 3300025933 Ga0207706_10138196 Ga0207706_101381962 260
87 3300025934 Ga0207686_10007508 Ga0207686_100075082 260
88 3300025941 Ga0207711_10000098 Ga0207711_1000009858 260
89 3300025941 Ga0207711_10530955 Ga0207711_105309551 260
90 3300025944 Ga0207661_10149509 Ga0207661_101495092 260
91 3300025945 Ga0207679_10468219 Ga0207679_104682191 260
92 3300025961 Ga0207712_10003095 Ga0207712_100030954 260
93 3300025986 Ga0207658_10026519 Ga0207658_100265194 260
94 3300026023 Ga0207677_10039559 Ga0207677_100395592 260
95 3300026035 Ga0207703_10008929 Ga0207703_100089292 260
96 3300026035 Ga0207703_10045732 Ga0207703_100457322 260
97 3300026067 Ga0207678_10296246 Ga0207678_102962461 260
98 3300026088 Ga0207641_10592557 Ga0207641_105925571 260
99 3300026095 Ga0207676_10004763 Ga0207676_100047636 260
100 3300026095 Ga0207676_10378740 Ga0207676_103787401 260
101 3300026142 Ga0207698_10276491 Ga0207698_102764912 260
102 3300028023 Ga0265357_1000389 Ga0265357_10003892 260
103 3300028380 Ga0268265_10050370 Ga0268265_100503702 260
104 3300028800 Ga0265338_10000096 Ga0265338_1000009646 260
105 3300028800 Ga0265338_10002296 Ga0265338_100022965 260
106 3300028800 Ga0265338_10003786 Ga0265338_1000378613 260
107 3300028800 Ga0265338_10058058 Ga0265338_100580583 260
108 3300030763 Ga0265763_1008050 Ga0265763_10080501 260
109 3300030878 Ga0265770_1002517 Ga0265770_10025174 260
110 3300031090 Ga0265760_10008620 Ga0265760_100086204 260
111 3300031240 Ga0265320_10000151 Ga0265320_100001512 260
112 3300031241 Ga0265325_10008573 Ga0265325_100085734 260
113 3300031249 Ga0265339_10132825 Ga0265339_101328252 260
114 3300031250 Ga0265331_10008988 Ga0265331_100089882 260
115 3300031344 Ga0265316_10104969 Ga0265316_101049693 260
116 3300031344 Ga0265316_10152284 Ga0265316_101522842 260
117 3300031595 Ga0265313_10000583 Ga0265313_1000058317 260
118 3300031711 Ga0265314_10001178 Ga0265314_1000117825 260
119 3300031712 Ga0265342_10205593 Ga0265342_102055931 260
120 3300035090 Ga0373949_0047427 Ga0373949_0047427_158_1021 260
121 3300035118 Ga0373954_0005355 Ga0373954_0005355_47_916 260
122 3300035171 Ga0373946_0021099 Ga0373946_0021099_131_973 260
123 3300035172 Ga0373955_0004854 Ga0373955_0004854_1238_2080 260
124 3300035410 Ga0373924_0065726 Ga0373924_0065726_490_1332 260
125 3300035695 Ga0373927_0066082 Ga0373927_0066082_1464_2306 260
126 3300035695 Ga0373927_0134014 Ga0373927_0134014_73_918 260
127 3300035724 Ga0373933_0003562 Ga0373933_0003562_2916_3758 260
128 3300036401 Ga0373937_0018280 Ga0373937_0018280_388_1230 260
129 3300036401 Ga0373937_0045591 Ga0373937_0045591_2114_3010 260
130 3300036401 Ga0373937_0065559 Ga0373937_0065559_1278_2147 260
131 3300037471 Ga0395905_0068550 Ga0395905_0068550_435_1274 260
132 3300037853 Ga0436364_0660691 Ga0436364_0660691_92_925 260
133 3300037853 Ga0436364_1484921 Ga0436364_1484921_803_1645 260
134 3300039437 Ga0436365_1270512 Ga0436365_1270512_30_884 260
135 3300039447 Ga0436361_0366806 Ga0436361_0366806_251_1093 260
136 3300039447 Ga0436361_1106425 Ga0436361_1106425_170_1012 260
137 3300039450 Ga0436363_1273370 Ga0436363_1273370_134_976 260
138 3300039453 Ga0436362_0638793 Ga0436362_0638793_1179_2024 260
139 3300045051 Ga0451576_0842751 Ga0451576_0842751_32_868 260
140 3300046454 Ga0495592_0036960 Ga0495592_0036960_1349_2191 260
141 3300046454 Ga0495592_0039871 Ga0495592_0039871_1595_2464 260
142 3300046461 Ga0495641_0068797 Ga0495641_0068797_349_1167 260
143 3300046462 Ga0495651_0016512 Ga0495651_0016512_343_1212 260
144 3300046463 Ga0495653_0002070 Ga0495653_0002070_1177_2019 260
145 3300046463 Ga0495653_0011441 Ga0495653_0011441_4536_5405 260
146 3300046463 Ga0495653_0103254 Ga0495653_0103254_743_1585 260
147 3300046477 Ga0495664_0004911 Ga0495664_0004911_691_1533 260
148 3300046477 Ga0495664_0049952 Ga0495664_0049952_474_1343 260
149 3300046514 Ga0495618_0040661 Ga0495618_0040661_1507_2376 260
150 3300046514 Ga0495618_0078641 Ga0495618_0078641_1103_1945 260
151 3300046516 Ga0495628_0009303 Ga0495628_0009303_3003_3872 260
152 3300046516 Ga0495628_0073467 Ga0495628_0073467_1415_2257 260
153 3300046517 Ga0495630_0000561 Ga0495630_0000561_18599_19474 260
154 3300046517 Ga0495630_0115682 Ga0495630_0115682_291_1133 260
155 3300046529 Ga0495652_0010023 Ga0495652_0010023_4630_5472 260
156 3300046529 Ga0495652_0045332 Ga0495652_0045332_658_1527 260
157 3300046536 Ga0495587_0001524 Ga0495587_0001524_10026_10868 260
158 3300046536 Ga0495587_0052194 Ga0495587_0052194_485_1327 260
159 3300046543 Ga0495645_0006956 Ga0495645_0006956_5103_5945 260
160 3300046543 Ga0495645_0035554 Ga0495645_0035554_1419_2288 260
161 3300046559 Ga0495667_0005103 Ga0495667_0005103_3634_4503 260
162 3300046559 Ga0495667_0025639 Ga0495667_0025639_110_952 260
163 3300046642 Ga0495634_0018683 Ga0495634_0018683_1051_1893 260
164 3300046642 Ga0495634_0098528 Ga0495634_0098528_119_1033 260
165 3300046663 Ga0495635_0005960 Ga0495635_0005960_4636_5478 260
166 3300046675 Ga0495657_0009144 Ga0495657_0009144_2447_3289 260
167 3300046675 Ga0495657_0031451 Ga0495657_0031451_492_1361 260
168 3300046679 Ga0495623_0001294 Ga0495623_0001294_50_892 260
169 3300046680 Ga0495646_0080031 Ga0495646_0080031_189_1031 260
170 3300046683 Ga0495658_0040871 Ga0495658_0040871_1308_2126 260
171 3300046689 Ga0495613_0004446 Ga0495613_0004446_3294_4130 260
172 3300046689 Ga0495613_0078235 Ga0495613_0078235_1421_2296 260
173 3300046809 Ga0495600_0008267 Ga0495600_0008267_1041_1883 260
174 3300046809 Ga0495600_0010780 Ga0495600_0010780_3267_4136 260
175 3300046809 Ga0495600_0241200 Ga0495600_0241200_144_962 260
176 3300047315 Ga0495581_0128250 Ga0495581_0128250_385_1227 260
177 3300047317 Ga0495604_0016287 Ga0495604_0016287_3450_4319 260
178 3300047317 Ga0495604_0033042 Ga0495604_0033042_1349_2191 260
179 3300047317 Ga0495604_0064649 Ga0495604_0064649_652_1521 260
180 3300047318 Ga0495636_0000409 Ga0495636_0000409_1669_2487 260
181 3300047319 Ga0495674_0007997 Ga0495674_0007997_4370_5239 260
182 3300047319 Ga0495674_0025264 Ga0495674_0025264_3120_3962 260
183 3300047319 Ga0495674_0035803 Ga0495674_0035803_3040_3882 260
184 3300047321 Ga0495676_0017092 Ga0495676_0017092_5203_6117 260
185 3300047322 Ga0495680_0001745 Ga0495680_0001745_17659_18501 260
186 3300047322 Ga0495680_0043197 Ga0495680_0043197_2133_2975 260
187 3300047322 Ga0495680_0067555 Ga0495680_0067555_1774_2643 260
188 3300047444 Ga0495675_0000161 Ga0495675_0000161_4543_5412 260
189 3300047444 Ga0495675_0004269 Ga0495675_0004269_7337_8212 260
190 3300047444 Ga0495675_0032992 Ga0495675_0032992_885_1727 260
191 3300047471 Ga0495684_0003025 Ga0495684_0003025_3860_4702 260
192 3300047471 Ga0495684_0006550 Ga0495684_0006550_1389_2258 260
193 3300047471 Ga0495684_0132135 Ga0495684_0132135_148_1017 260
194 3300047673 Ga0495593_0092232 Ga0495593_0092232_314_1156 260
195 3300048088 Ga0495602_0001591 Ga0495602_0001591_17966_18835 260
196 3300048088 Ga0495602_0012903 Ga0495602_0012903_4988_5830 260
197 3300048088 Ga0495602_0064750 Ga0495602_0064750_1242_2111 260
198 3300048088 Ga0495602_0103997 Ga0495602_0103997_395_1270 260
199 3300048903 Ga0496100_0053143 Ga0496100_0053143_1052_1894 260
200 3300048904 Ga0496101_0000701 Ga0496101_0000701_4156_4998 260
201 3300048905 Ga0496102_0557851 Ga0496102_0557851_198_1016 260
202 3300048907 Ga0496104_0033075 Ga0496104_0033075_838_1800 260
203 3300048907 Ga0496104_0151110 Ga0496104_0151110_914_1783 260
204 3300048907 Ga0496104_0211257 Ga0496104_0211257_966_1838 260
205 3300048908 Ga0496105_0249000 Ga0496105_0249000_131_1000 260
206 3300048910 Ga0496107_0060218 Ga0496107_0060218_1327_2169 260
207 3300048910 Ga0496107_0191740 Ga0496107_0191740_510_1349 260
208 3300048911 Ga0496108_0005172 Ga0496108_0005172_5572_6414 260
209 3300048912 Ga0496109_0151822 Ga0496109_0151822_31_885 260
210 3300048915 Ga0496112_0007962 Ga0496112_0007962_3025_3867 260
211 3300048917 Ga0496114_0000664 Ga0496114_0000664_7583_8425 260
212 3300048918 Ga0496115_0009723 Ga0496115_0009723_2479_3348 260
213 3300050507 nmdc:mga05p37_39721_c1 nmdc:mga05p37_39721_c1_902_1744 260
214 3300050514 nmdc:mga08x19_152757_c1 nmdc:mga08x19_152757_c1_656_1519 260
215 3300053077 Ga0495601_0015650 Ga0495601_0015650_128_970 260
216 3300053084 Ga0495595_0004431 Ga0495595_0004431_172_1014 260
217 3300053085 Ga0495619_0003375 Ga0495619_0003375_4646_5488 260
218 iso_pu_bacteria 2522125168 2522553104 263
219 iso_pu_bacteria 2585428115 2587942068 263
220 iso_pu_bacteria 2643221584 2643931187 263
221 iso_pu_bacteria 2857504554 2857509160 263
222 iso_pu_bacteria 2884960567 2884964237 263
223 iso_pu_bacteria 2919399522 2919400239 263
224 iso_pu_bacteria 2945924605 2945926658 263
225 3300003320 rootH2_10076171 rootH2_100761712 265
226 3300005262 Ga0065165_1000312 Ga0065165_100031270 265
227 3300046460 Ga0495638_0001098 Ga0495638_0001098_23866_24693 265
228 3300046471 Ga0495650_0000007 Ga0495650_0000007_536979_537806 265
229 3300046471 Ga0495650_0040475 Ga0495650_0040475_355_1182 265
230 3300046513 Ga0495616_0000044 Ga0495616_0000044_33240_34067 265
231 3300046530 Ga0495654_0000053 Ga0495654_0000053_40371_41198 265
232 3300046660 Ga0495625_0004788 Ga0495625_0004788_7823_8650 265
233 3300046660 Ga0495625_0058418 Ga0495625_0058418_1339_2166 265
234 3300053102 Ga0500554_001489 Ga0500554_001489_1663_2523 265
235 3300053123 Ga0500614_006601 Ga0500614_006601_580_1440 265
236 3300053153 Ga0500616_0007001 Ga0500616_0007001_4081_4908 265
237 3300053158 Ga0500627_0062499 Ga0500627_0062499_252_1079 265
238 3300003316 rootH1_10162880 rootH1_101628802 267
239 3300003322 rootL2_10075891 rootL2_1007589113 267
240 3300003322 rootL2_10154724 rootL2_101547245 267
241 3300003323 rootH1_10117503 rootH1_1011750311 267
242 3300005337 Ga0070682_100004536 Ga0070682_1000045362 267
243 3300005367 Ga0070667_100517831 Ga0070667_1005178311 267
244 3300009011 Ga0105251_10023480 Ga0105251_100234802 267
245 3300015261 Ga0182006_1000254 Ga0182006_100025436 267
246 3300015682 Ga0183373_1001 Ga0183373_10011067 267
247 3300031731 Ga0307405_10000008 Ga0307405_1000000847 267
248 3300031903 Ga0307407_10000037 Ga0307407_1000003767 267
249 3300032002 Ga0307416_100000048 Ga0307416_1000000483 267
250 3300044842 Ga0466957_0014575 Ga0466957_0014575_636_1454 267
251 3300048906 Ga0496103_0073476 Ga0496103_0073476_61_864 267
252 3300048916 Ga0496113_0197278 Ga0496113_0197278_257_1129 267
253 3300048919 Ga0496116_0000452 Ga0496116_0000452_23877_24749 267
254 3300048919 Ga0496116_0000938 Ga0496116_0000938_31904_32707 267
255 3300048920 Ga0496117_0000023 Ga0496117_0000023_400801_401673 267
256 3300048921 Ga0496118_0000564 Ga0496118_0000564_25022_25894 267
257 3300048922 Ga0496119_0000010 Ga0496119_0000010_36919_37791 267
258 3300048925 Ga0496122_0000166 Ga0496122_0000166_153161_154033 267
259 3300048926 Ga0496123_0068159 Ga0496123_0068159_791_1663 267
260 3300048927 Ga0496124_0007084 Ga0496124_0007084_3420_4292 267
261 3300048928 Ga0496125_0000675 Ga0496125_0000675_35939_36811 267
262 3300053125 Ga0500618_005478 Ga0500618_005478_1046_1849 267
263 3300053156 Ga0500622_0022203 Ga0500622_0022203_2376_3179 267

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00378

ECH_1

Enoyl-CoA hydratase/isomerase

51

271

0.91

PF16113

ECH_2

Enoyl-CoA hydratase/isomerase

56

271

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3h0u-assembly1.cif.gz_A crystal structure of a putative enoyl-coa hydratase from streptomyces avermitilis 0.9404 2 266
3h0u-assembly1.cif.gz_A crystal structure of a putative enoyl-coa hydratase from streptomyces avermitilis 0.9301 2 266
8ahz-assembly1.cif.gz_B native vird of streptomyces virginiae 0.9073 2 234
4lk5-assembly1.cif.gz_A crystal structure of a enoyl-coa hydratase from mycobacterium avium subsp. paratuberculosis k-10 0.9068 2 246
3gkb-assembly1.cif.gz_A crystal structure of a putative enoyl-coa hydratase from streptomyces avermitilis 0.9067 1 265
ID Description Score Start End Superfamily
3h0uA00 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9404 2 266 3.90.226.10
3h0uA00 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9301 2 266 3.90.226.10
4lk5A00 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9114 2 246 3.90.226.10
3gkbA00 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9067 1 265 3.90.226.10
3rsiB02 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1; 0.9066 99 198 3.90.226.20
ID Description Score Start End GO Terms
AF-A0A1H6H531-F1-model_v4 Enoyl-CoA hydratase/carnithine racemase 0.9939 1 267
AF-A0A173MHN4-F1-model_v4 Enoyl-CoA hydratase/carnithine racemase 0.9909 1 267
AF-A0A521PQ84-F1-model_v4 Enoyl-CoA hydratase/isomerase family protein 0.9762 2 265 GO:0016853
AF-A0A173MBI9-F1-model_v4 Enoyl-CoA hydratase/carnithine racemase 0.9717 2 266
AF-A0A660LC32-F1-model_v4 Enoyl-CoA hydratase/carnithine racemase 0.9717 2 235

Feature Viewer

pLDDT pTM Quality
91.88 0.9 High
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Predicted Structure (AlphaFold2)

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