F372124

General Info

Members Datasets Scaffolds Average Seq Length
263 185 248 292

Family's Representative Sequence

Representative Sequence 3300047472|Ga0495686_0006682|Ga0495686_0006682_5182_6213
Length 343
Sequence VIITVDIVEPSSKNEGPWSDDGAGRATLQSPYFLTERPAVTDPLSEVVTLLQPTARFSKRVEGSGHWRIRREGQGDPFYAAVLEGTCELSIDGRPPLTLLAGDFVLIPAVQMLENASAGASQDIEPSIPTRIGEDHFRIGNLDGPVNLRVQLGHCSFASPDAALLVSLLPDLVHVRGEQRLATLVQMVGEEARSRRPAREVVLERLLEVLLIEALRSRLGPAEGAGLVLGLADERIAAALRAVHARPAHAWSVVTLAAEAALSRSAFSARFTKVMGMAPMEYLLTWRMALAKRLLRDRELGLQQVAERVGYASAVTFGVAFARHTGVSPARYARANGTQAPGV

Samples

Sample ID Description Type Environment
1 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
2 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
3 2643221717 Acidovorax sp. Root267 Isolate Unclassified
4 2738541307 Variovorax sp. GV008 Isolate Unclassified
5 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
6 2818991457 Xanthomonas translucens 569 Isolate Unclassified
7 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
8 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
9 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
10 2884338543 Luteibacter pinisoli MAH-14 Isolate Rhizosphere
11 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
12 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
13 2941471342 Luteibacter sp. 621 Isolate Unclassified
14 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
15 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
16 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
17 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
18 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
19 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
20 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
21 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
22 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
23 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
24 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
25 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
26 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
27 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
28 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
29 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
30 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
31 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
32 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
33 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
34 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
35 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
36 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
37 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
38 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
39 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
42 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
43 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
54 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
64 3300012475 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.old.080610 Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
70 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
71 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
72 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
75 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
77 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
84 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
124 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
125 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
126 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
127 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
128 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
132 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
133 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
134 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
135 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
136 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
137 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
138 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
139 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
140 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
141 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
142 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
143 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
144 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
145 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
146 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
147 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
148 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
149 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
150 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
151 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
152 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
153 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
154 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
155 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
156 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
157 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
158 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
159 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
160 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
161 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
162 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
163 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
164 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
165 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
166 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
167 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
168 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
169 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
170 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
171 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
172 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
173 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
174 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
175 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
176 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
182 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
184 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
185 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.3
Metatranscriptomes 0
Isolates 5.7

Biome Distribution

Category Percentage (%)
Aerial Root 0.38
Bulb 0
Endosphere 14.07
Nodule 0.76
Rhizoplane 4.56
Rhizosphere 59.32
Stem 0
Stem Tuber 0
Unclassified 20.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1001580 3300001904 Bacteria 4151
2 JGI24739J22299_10010059 3300001989 Bacteria 3516
3 JGI25150J39212_1000283 3300002774 Bacteria 26572
4 JGI25153J46596_10000011 3300003215 Bacteria 319992
5 JGI25153J46596_10000108 3300003215 Bacteria 94715
6 Ga0055539_1000249 3300003752 Bacteria 34756
7 Ga0055535_1000102 3300003761 Bacteria 92203
8 Ga0055542_1000147 3300003762 Bacteria 88503
9 Ga0055542_1000226 3300003762 Bacteria 67157
10 Ga0055529_1000243 3300003763 Bacteria 67164
11 Ga0055524_1000010 3300003775 Bacteria 282893
12 Ga0055540_1001048 3300003792 Bacteria 17597
13 Ga0058692_1000028 3300003856 Bacteria 193757
14 Ga0070658_10243163 3300005327 Bacteria 1525
15 Ga0070670_100000081 3300005331 Bacteria 92043
16 Ga0070670_100248175 3300005331 Bacteria 1550
17 Ga0070666_10015284 3300005335 Bacteria 4895
18 Ga0070660_100088667 3300005339 Bacteria 2436
19 Ga0070661_100169479 3300005344 Bacteria 1657
20 Ga0070668_100003838 3300005347 Bacteria 11101
21 Ga0070669_100002225 3300005353 Bacteria 14036
22 Ga0070671_100000826 3300005355 Bacteria 22459
23 Ga0070674_100001798 3300005356 Bacteria 11637
24 Ga0070673_100149036 3300005364 Bacteria 1980
25 Ga0070659_100064697 3300005366 Bacteria 2895
26 Ga0070667_100003110 3300005367 Bacteria 14270
27 Ga0070667_100045388 3300005367 Bacteria 3694
28 Ga0070663_100086209 3300005455 Bacteria 2319
29 Ga0070678_100000110 3300005456 Bacteria 32092
30 Ga0068867_100073664 3300005459 Bacteria 2557
31 Ga0070685_10073008 3300005466 Bacteria 2038
32 Ga0068853_100136014 3300005539 Bacteria 2203
33 Ga0068854_100037312 3300005578 Bacteria 3410
34 Ga0068852_100012534 3300005616 Bacteria 6441
35 Ga0068864_100000016 3300005618 Bacteria 292454
36 Ga0068851_10103535 3300005834 Bacteria 1512
37 Ga0068863_100000089 3300005841 Bacteria 101645
38 Ga0068863_100016921 3300005841 Bacteria 6993
39 Ga0068858_100028614 3300005842 Bacteria 5175
40 Ga0068862_100000068 3300005844 Bacteria 123535
41 Ga0068862_100004034 3300005844 Bacteria 12440
42 Ga0075369_10028727 3300006186 Bacteria 2332
43 Ga0097621_100035980 3300006237 Bacteria 3958
44 Ga0068871_100094671 3300006358 Bacteria 2493
45 Ga0105251_10002516 3300009011 Bacteria 14304
46 Ga0105251_10003972 3300009011 Bacteria 10474
47 Ga0105250_10020133 3300009092 Bacteria 2697
48 Ga0105247_10037833 3300009101 Bacteria 2944
49 Ga0105243_10000236 3300009148 Bacteria 63301
50 Ga0105243_10008527 3300009148 Bacteria 7864
51 Ga0105241_10237357 3300009174 Bacteria 1540
52 Ga0105248_10014568 3300009177 Bacteria 8655
53 Ga0105237_10325695 3300009545 Bacteria 1540
54 Ga0105238_10606011 3300009551 Bacteria 1103
55 Ga0105249_10000162 3300009553 Bacteria 80304
56 Ga0105239_10000524 3300010375 Bacteria 55447
57 Ga0105239_10736025 3300010375 Bacteria 1128
58 Ga0105246_10142244 3300011119 Bacteria 1805
59 Ga0157317_1002235 3300012475 Bacteria 1130
60 Ga0157370_10009472 3300013104 Bacteria 10398
61 Ga0157370_10023113 3300013104 Bacteria 6180
62 Ga0157369_10016891 3300013105 Bacteria 8201
63 Ga0157369_10172127 3300013105 Bacteria 2281
64 Ga0157372_10037845 3300013307 Bacteria 5323
65 Ga0157379_10193403 3300014968 Bacteria 1838
66 Ga0182006_1016767 3300015261 Bacteria 3122
67 Ga0182005_1001161 3300015265 Bacteria 10905
68 Ga0213872_10021500 3300021361 Bacteria 2971
69 Ga0209672_100207 3300025228 Bacteria 46534
70 Ga0209258_100111 3300025242 Bacteria 197019
71 Ga0209258_101053 3300025242 Bacteria 12128
72 Ga0207425_1000098 3300025245 Bacteria 83892
73 Ga0209148_1000008 3300025254 Bacteria 1504371
74 Ga0209148_1000099 3300025254 Bacteria 227713
75 Ga0209129_1000575 3300025258 Bacteria 25349
76 Ga0209565_1010429 3300025263 Bacteria 2304
77 Ga0209565_1021851 3300025263 Bacteria 1331
78 Ga0209455_1000002 3300025272 Bacteria 1505459
79 Ga0209673_1029272 3300025273 Bacteria 1756
80 Ga0209676_1000225 3300025292 Bacteria 124018
81 Ga0209676_1000782 3300025292 Bacteria 42349
82 Ga0209676_1012725 3300025292 Bacteria 3279
83 Ga0209025_1000413 3300025294 Bacteria 85984
84 Ga0209564_1000484 3300025295 Bacteria 66127
85 Ga0209758_1000007 3300025297 Bacteria 1270410
86 Ga0209758_1000019 3300025297 Bacteria 743682
87 Ga0209050_1000746 3300025298 Bacteria 46836
88 Ga0209050_1001290 3300025298 Bacteria 28439
89 Ga0209050_1006156 3300025298 Bacteria 7221
90 Ga0209256_1000007 3300025299 Bacteria 1136599
91 Ga0209051_1001394 3300025303 Bacteria 20786
92 Ga0209051_1004217 3300025303 Bacteria 8968
93 Ga0209257_1005039 3300025304 Bacteria 9608
94 Ga0207696_1013787 3300025711 Bacteria 2796
95 Ga0207713_1002193 3300025735 Bacteria 14472
96 Ga0207713_1008748 3300025735 Bacteria 5774
97 Ga0207710_10115598 3300025900 Bacteria 1277
98 Ga0207680_10039297 3300025903 Bacteria 2745
99 Ga0207647_10000002 3300025904 Bacteria 400771
100 Ga0207647_10002313 3300025904 Bacteria 14511
101 Ga0207705_10193162 3300025909 Bacteria 1540
102 Ga0207654_10021249 3300025911 Bacteria 3450
103 Ga0207695_10012205 3300025913 Bacteria 10319
104 Ga0207695_10043365 3300025913 Bacteria 4795
105 Ga0207671_10205357 3300025914 Bacteria 1540
106 Ga0207657_10030974 3300025919 Bacteria 4849
107 Ga0207649_10025862 3300025920 Bacteria 3428
108 Ga0207652_10390642 3300025921 Bacteria 1256
109 Ga0207681_10001223 3300025923 Bacteria 16540
110 Ga0207694_10202785 3300025924 Bacteria 1614
111 Ga0207650_10000288 3300025925 Bacteria 51267
112 Ga0207650_10283169 3300025925 Bacteria 1350
113 Ga0207709_10000065 3300025935 Bacteria 189826
114 Ga0207709_10001926 3300025935 Bacteria 13633
115 Ga0207669_10001342 3300025937 Bacteria 10475
116 Ga0207711_10000025 3300025941 Bacteria 289972
117 Ga0207711_10026771 3300025941 Bacteria 4840
118 Ga0207689_10335268 3300025942 Bacteria 1256
119 Ga0207667_10190203 3300025949 Bacteria 2106
120 Ga0207712_10000316 3300025961 Bacteria 44217
121 Ga0207668_10046609 3300025972 Bacteria 2962
122 Ga0207658_10020404 3300025986 Bacteria 4589
123 Ga0207658_10079425 3300025986 Bacteria 2509
124 Ga0207639_10127095 3300026041 Bacteria 2104
125 Ga0207678_10056506 3300026067 Bacteria 3378
126 Ga0207702_10293763 3300026078 Bacteria 1540
127 Ga0207641_10000103 3300026088 Bacteria 122350
128 Ga0207641_10034606 3300026088 Bacteria 4203
129 Ga0207648_10100592 3300026089 Bacteria 2533
130 Ga0207676_10000044 3300026095 Bacteria 161679
131 Ga0207674_10111792 3300026116 Bacteria 2706
132 Ga0207683_10001932 3300026121 Bacteria 18350
133 Ga0207698_10004587 3300026142 Bacteria 8434
134 Ga0209371_1000025 3300027312 Bacteria 450640
135 Ga0268265_10000142 3300028380 Bacteria 91165
136 Ga0268265_10007278 3300028380 Bacteria 7478
137 Ga0268264_10003519 3300028381 Bacteria 13498
138 Ga0307517_10034804 3300028786 Bacteria 5722
139 Ga0268256_1000027 3300030500 Bacteria 450640
140 Ga0307508_10155927 3300031616 Bacteria 1887
141 Ga0307412_10084778 3300031911 Bacteria 2200
142 Ga0373927_0000119 3300035695 Bacteria 59758
143 Ga0373925_0001658 3300037068 Bacteria 18762
144 Ga0395899_0020058 3300037312 Bacteria 5072
145 Ga0395901_0001410 3300038443 Bacteria 25088
146 Ga0436361_0080210 3300039447 Bacteria 6585
147 Ga0451795_0084411 3300041456 Bacteria 1728
148 Ga0450901_004990 3300042533 Bacteria 1365
149 Ga0466961_0023578 3300044693 Bacteria 3959
150 Ga0466961_0185008 3300044693 Unclassified 1293
151 Ga0466963_0124716 3300044694 Bacteria 1775
152 Ga0466968_0001146 3300044735 Bacteria 9394
153 Ga0466968_0003614 3300044735 Bacteria 5725
154 Ga0466958_0270659 3300045836 Unclassified 1088
155 Ga0495590_0000004 3300046457 Bacteria 402091
156 Ga0495639_0019450 3300046475 Bacteria 2964
157 Ga0495606_0000184 3300046507 Bacteria 110347
158 Ga0495606_0000254 3300046507 Bacteria 94040
159 Ga0495606_0085511 3300046507 Bacteria 1951
160 Ga0495606_0116733 3300046507 Bacteria 1602
161 Ga0495606_0210699 3300046507 Bacteria 1101
162 Ga0495610_0000210 3300046512 Bacteria 64154
163 Ga0495620_0001035 3300046515 Bacteria 17078
164 Ga0495631_0000076 3300046518 Bacteria 63613
165 Ga0495637_0022012 3300046520 Bacteria 2913
166 Ga0495643_0010314 3300046522 Bacteria 5753
167 Ga0495643_0095345 3300046522 Bacteria 1530
168 Ga0495648_0000131 3300046524 Bacteria 88077
169 Ga0495663_0003636 3300046525 Bacteria 4419
170 Ga0495622_0000074 3300046557 Bacteria 87846
171 Ga0495633_0000328 3300046558 Bacteria 53654
172 Ga0495625_0028739 3300046660 Bacteria 4165
173 Ga0495625_0075626 3300046660 Bacteria 2356
174 Ga0495670_0003652 3300046691 Bacteria 7564
175 Ga0495660_0004038 3300046810 Bacteria 8958
176 Ga0495660_0028246 3300046810 Bacteria 3171
177 Ga0495687_000041 3300047443 Bacteria 229171
178 Ga0495687_003269 3300047443 Bacteria 11941
179 Ga0495677_0001801 3300047445 Bacteria 8573
180 Ga0495673_0001983 3300047469 Bacteria 15126
181 Ga0495681_0009774 3300047470 Bacteria 5872
182 Ga0495686_0000028 3300047472 Bacteria 369493
183 Ga0495686_0000132 3300047472 Bacteria 151609
184 Ga0495686_0006682 3300047472 Bacteria 8777
185 Ga0496101_0051852 3300048904 Bacteria 2957
186 Ga0496101_0135919 3300048904 Bacteria 1870
187 Ga0496102_0000051 3300048905 Bacteria 177975
188 Ga0496102_0002410 3300048905 Bacteria 15970
189 Ga0496102_0573433 3300048905 Bacteria 1051
190 Ga0496103_0000112 3300048906 Bacteria 89434
191 Ga0496104_0006026 3300048907 Bacteria 10631
192 Ga0496105_0000648 3300048908 Bacteria 23344
193 Ga0496111_0005905 3300048914 Bacteria 7896
194 Ga0496114_0008023 3300048917 Bacteria 8358
195 Ga0496115_0000026 3300048918 Bacteria 146141
196 Ga0496116_0006286 3300048919 Bacteria 10820
197 Ga0496116_0162139 3300048919 Bacteria 1225
198 Ga0496117_0000046 3300048920 Bacteria 300879
199 Ga0496117_0022029 3300048920 Bacteria 5124
200 Ga0496117_0032605 3300048920 Bacteria 3955
201 Ga0496117_0051927 3300048920 Bacteria 2893
202 Ga0496117_0065110 3300048920 Bacteria 2480
203 Ga0496118_0000036 3300048921 Bacteria 318213
204 Ga0496118_0000339 3300048921 Bacteria 80008
205 Ga0496118_0000608 3300048921 Bacteria 58952
206 Ga0496118_0000810 3300048921 Bacteria 49906
207 Ga0496118_0002119 3300048921 Bacteria 27797
208 Ga0496118_0006982 3300048921 Bacteria 12173
209 Ga0496118_0023930 3300048921 Bacteria 5288
210 Ga0496120_0004435 3300048923 Bacteria 11774
211 Ga0496121_0000078 3300048924 Bacteria 233455
212 Ga0496121_0000219 3300048924 Bacteria 125851
213 Ga0496121_0000246 3300048924 Bacteria 114919
214 Ga0496121_0000367 3300048924 Bacteria 92745
215 Ga0496121_0001411 3300048924 Bacteria 40702
216 Ga0496121_0007701 3300048924 Bacteria 12928
217 Ga0496121_0031205 3300048924 Bacteria 4873
218 Ga0496121_0047322 3300048924 Bacteria 3671
219 Ga0496121_0117929 3300048924 Bacteria 2010
220 Ga0496121_0207399 3300048924 Bacteria 1391
221 Ga0496122_0013120 3300048925 Bacteria 8151
222 Ga0496122_0028998 3300048925 Bacteria 4680
223 Ga0496122_0038657 3300048925 Bacteria 3817
224 Ga0496123_0005475 3300048926 Bacteria 12774
225 Ga0496123_0007653 3300048926 Bacteria 10108
226 Ga0496123_0033455 3300048926 Bacteria 3699
227 Ga0496123_0038753 3300048926 Bacteria 3344
228 Ga0496123_0044206 3300048926 Bacteria 3048
229 Ga0496124_0000011 3300048927 Bacteria 524145
230 Ga0496124_0049984 3300048927 Bacteria 3564
231 Ga0496124_0113838 3300048927 Bacteria 2173
232 Ga0496125_0000315 3300048928 Bacteria 94822
233 Ga0496125_0000525 3300048928 Bacteria 66539
234 Ga0496125_0134607 3300048928 Bacteria 1731
235 Ga0496126_0000128 3300048929 Bacteria 178066
236 Ga0496126_0003798 3300048929 Bacteria 18757
237 Ga0496126_0007073 3300048929 Bacteria 12359
238 Ga0496126_0092169 3300048929 Bacteria 2663
239 Ga0496126_0095844 3300048929 Bacteria 2602
240 Ga0501032_0025514 3300049569 Bacteria 4074
241 Ga0501033_0011653 3300049570 Bacteria 6724
242 Ga0501034_0004732 3300049571 Bacteria 15071
243 Ga0501036_0040001 3300049572 Bacteria 3966
244 Ga0501048_0102529 3300049582 Bacteria 2019
245 Ga0501071_0035925 3300049587 Bacteria 3532
246 Ga0501035_0012873 3300049822 Bacteria 7724
247 Ga0501044_0014593 3300049823 Bacteria 8473
248 Ga0500559_0062447 3300053136 Bacteria 1663

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300031616 Ga0307508_10155927 Ga0307508_101559272 261
2 3300009148 Ga0105243_10008527 Ga0105243_100085277 264
3 3300015265 Ga0182005_1001161 Ga0182005_10011614 264
4 3300025935 Ga0207709_10001926 Ga0207709_100019262 264
5 3300048921 Ga0496118_0002119 Ga0496118_0002119_8814_9764 264
6 3300005466 Ga0070685_10073008 Ga0070685_100730083 266
7 3300009011 Ga0105251_10003972 Ga0105251_100039722 271
8 3300001989 JGI24739J22299_10010059 JGI24739J22299_100100596 275
9 3300002774 JGI25150J39212_1000283 JGI25150J39212_10002835 275
10 3300003215 JGI25153J46596_10000108 JGI25153J46596_1000010817 275
11 3300003792 Ga0055540_1001048 Ga0055540_10010486 275
12 3300005327 Ga0070658_10243163 Ga0070658_102431632 275
13 3300005331 Ga0070670_100248175 Ga0070670_1002481752 275
14 3300005335 Ga0070666_10015284 Ga0070666_100152846 275
15 3300005339 Ga0070660_100088667 Ga0070660_1000886673 275
16 3300005344 Ga0070661_100169479 Ga0070661_1001694792 275
17 3300005347 Ga0070668_100003838 Ga0070668_1000038389 275
18 3300005353 Ga0070669_100002225 Ga0070669_1000022255 275
19 3300005355 Ga0070671_100000826 Ga0070671_10000082620 275
20 3300005366 Ga0070659_100064697 Ga0070659_1000646974 275
21 3300005367 Ga0070667_100045388 Ga0070667_1000453882 275
22 3300005455 Ga0070663_100086209 Ga0070663_1000862092 275
23 3300005539 Ga0068853_100136014 Ga0068853_1001360142 275
24 3300005578 Ga0068854_100037312 Ga0068854_1000373123 275
25 3300005616 Ga0068852_100012534 Ga0068852_1000125344 275
26 3300005834 Ga0068851_10103535 Ga0068851_101035352 275
27 3300005841 Ga0068863_100016921 Ga0068863_1000169214 275
28 3300005842 Ga0068858_100028614 Ga0068858_1000286144 275
29 3300005844 Ga0068862_100004034 Ga0068862_10000403411 275
30 3300009092 Ga0105250_10020133 Ga0105250_100201332 275
31 3300009174 Ga0105241_10237357 Ga0105241_102373571 275
32 3300009177 Ga0105248_10014568 Ga0105248_1001456810 275
33 3300009545 Ga0105237_10325695 Ga0105237_103256951 275
34 3300009551 Ga0105238_10606011 Ga0105238_106060112 275
35 3300010375 Ga0105239_10736025 Ga0105239_107360252 275
36 3300013104 Ga0157370_10023113 Ga0157370_100231133 275
37 3300013105 Ga0157369_10172127 Ga0157369_101721271 275
38 3300025245 Ga0207425_1000098 Ga0207425_100009817 275
39 3300025258 Ga0209129_1000575 Ga0209129_100057514 275
40 3300025263 Ga0209565_1021851 Ga0209565_10218511 275
41 3300025292 Ga0209676_1012725 Ga0209676_10127254 275
42 3300025294 Ga0209025_1000413 Ga0209025_100041319 275
43 3300025297 Ga0209758_1000019 Ga0209758_100001917 275
44 3300025298 Ga0209050_1000746 Ga0209050_100074626 275
45 3300025298 Ga0209050_1001290 Ga0209050_100129023 275
46 3300025303 Ga0209051_1001394 Ga0209051_100139418 275
47 3300025711 Ga0207696_1013787 Ga0207696_10137872 275
48 3300025735 Ga0207713_1002193 Ga0207713_100219313 275
49 3300025900 Ga0207710_10115598 Ga0207710_101155982 275
50 3300025903 Ga0207680_10039297 Ga0207680_100392972 275
51 3300025904 Ga0207647_10002313 Ga0207647_100023139 275
52 3300025909 Ga0207705_10193162 Ga0207705_101931621 275
53 3300025911 Ga0207654_10021249 Ga0207654_100212495 275
54 3300025913 Ga0207695_10043365 Ga0207695_100433652 275
55 3300025914 Ga0207671_10205357 Ga0207671_102053571 275
56 3300025919 Ga0207657_10030974 Ga0207657_100309746 275
57 3300025920 Ga0207649_10025862 Ga0207649_100258624 275
58 3300025923 Ga0207681_10001223 Ga0207681_1000122311 275
59 3300025924 Ga0207694_10202785 Ga0207694_102027851 275
60 3300025925 Ga0207650_10283169 Ga0207650_102831693 275
61 3300025941 Ga0207711_10026771 Ga0207711_100267713 275
62 3300025949 Ga0207667_10190203 Ga0207667_101902031 275
63 3300025986 Ga0207658_10079425 Ga0207658_100794251 275
64 3300026041 Ga0207639_10127095 Ga0207639_101270952 275
65 3300026067 Ga0207678_10056506 Ga0207678_100565061 275
66 3300026078 Ga0207702_10293763 Ga0207702_102937631 275
67 3300026116 Ga0207674_10111792 Ga0207674_101117921 275
68 3300026142 Ga0207698_10004587 Ga0207698_100045875 275
69 3300028380 Ga0268265_10007278 Ga0268265_100072786 275
70 3300028381 Ga0268264_10003519 Ga0268264_100035193 275
71 3300044694 Ga0466963_0124716 Ga0466963_0124716_579_1490 275
72 3300046507 Ga0495606_0085511 Ga0495606_0085511_931_1836 275
73 3300048920 Ga0496117_0022029 Ga0496117_0022029_2271_3215 275
74 3300048921 Ga0496118_0023930 Ga0496118_0023930_3639_4583 275
75 3300048924 Ga0496121_0007701 Ga0496121_0007701_7422_8366 275
76 3300048926 Ga0496123_0044206 Ga0496123_0044206_26_970 275
77 3300048927 Ga0496124_0049984 Ga0496124_0049984_1021_1965 275
78 3300048927 Ga0496124_0113838 Ga0496124_0113838_1146_2051 275
79 3300049587 Ga0501071_0035925 Ga0501071_0035925_1750_2655 275
80 3300053136 Ga0500559_0062447 Ga0500559_0062447_700_1602 275
81 3300003215 JGI25153J46596_10000011 JGI25153J46596_10000011191 276
82 3300003762 Ga0055542_1000226 Ga0055542_10002269 276
83 3300003763 Ga0055529_1000243 Ga0055529_10002439 276
84 3300003856 Ga0058692_1000028 Ga0058692_100002867 276
85 3300005331 Ga0070670_100000081 Ga0070670_10000008142 276
86 3300005356 Ga0070674_100001798 Ga0070674_1000017986 276
87 3300005364 Ga0070673_100149036 Ga0070673_1001490362 276
88 3300005367 Ga0070667_100003110 Ga0070667_1000031105 276
89 3300005456 Ga0070678_100000110 Ga0070678_10000011016 276
90 3300005459 Ga0068867_100073664 Ga0068867_1000736642 276
91 3300005618 Ga0068864_100000016 Ga0068864_10000001647 276
92 3300005841 Ga0068863_100000089 Ga0068863_10000008997 276
93 3300005844 Ga0068862_100000068 Ga0068862_10000006846 276
94 3300006186 Ga0075369_10028727 Ga0075369_100287271 276
95 3300006237 Ga0097621_100035980 Ga0097621_1000359802 276
96 3300006358 Ga0068871_100094671 Ga0068871_1000946712 276
97 3300009011 Ga0105251_10002516 Ga0105251_100025168 276
98 3300009101 Ga0105247_10037833 Ga0105247_100378333 276
99 3300009148 Ga0105243_10000236 Ga0105243_1000023643 276
100 3300009553 Ga0105249_10000162 Ga0105249_1000016218 276
101 3300011119 Ga0105246_10142244 Ga0105246_101422442 276
102 3300014968 Ga0157379_10193403 Ga0157379_101934032 276
103 3300025254 Ga0209148_1000008 Ga0209148_10000081205 276
104 3300025272 Ga0209455_1000002 Ga0209455_1000002221 276
105 3300025297 Ga0209758_1000007 Ga0209758_1000007124 276
106 3300025735 Ga0207713_1008748 Ga0207713_10087487 276
107 3300025921 Ga0207652_10390642 Ga0207652_103906421 276
108 3300025925 Ga0207650_10000288 Ga0207650_1000028817 276
109 3300025935 Ga0207709_10000065 Ga0207709_1000006589 276
110 3300025937 Ga0207669_10001342 Ga0207669_100013426 276
111 3300025941 Ga0207711_10000025 Ga0207711_10000025273 276
112 3300025942 Ga0207689_10335268 Ga0207689_103352681 276
113 3300025961 Ga0207712_10000316 Ga0207712_1000031618 276
114 3300025972 Ga0207668_10046609 Ga0207668_100466091 276
115 3300025986 Ga0207658_10020404 Ga0207658_100204044 276
116 3300026088 Ga0207641_10000103 Ga0207641_1000010343 276
117 3300026088 Ga0207641_10034606 Ga0207641_100346064 276
118 3300026089 Ga0207648_10100592 Ga0207648_101005922 276
119 3300026095 Ga0207676_10000044 Ga0207676_1000004443 276
120 3300026121 Ga0207683_10001932 Ga0207683_1000193211 276
121 3300027312 Ga0209371_1000025 Ga0209371_1000025194 276
122 3300028380 Ga0268265_10000142 Ga0268265_1000014243 276
123 3300030500 Ga0268256_1000027 Ga0268256_1000027194 276
124 3300041456 Ga0451795_0084411 Ga0451795_0084411_138_1043 276
125 3300044735 Ga0466968_0001146 Ga0466968_0001146_4267_5169 276
126 3300046507 Ga0495606_0000254 Ga0495606_0000254_84385_85290 276
127 3300046507 Ga0495606_0116733 Ga0495606_0116733_391_1335 276
128 3300046522 Ga0495643_0010314 Ga0495643_0010314_4120_5064 276
129 3300046522 Ga0495643_0095345 Ga0495643_0095345_23_967 276
130 3300046524 Ga0495648_0000131 Ga0495648_0000131_30638_31564 276
131 3300046660 Ga0495625_0075626 Ga0495625_0075626_54_998 276
132 3300046691 Ga0495670_0003652 Ga0495670_0003652_4242_5258 276
133 3300046810 Ga0495660_0028246 Ga0495660_0028246_924_1940 276
134 3300047443 Ga0495687_000041 Ga0495687_000041_33466_34371 276
135 3300047445 Ga0495677_0001801 Ga0495677_0001801_2299_3243 276
136 3300047470 Ga0495681_0009774 Ga0495681_0009774_3361_4374 276
137 3300047472 Ga0495686_0000132 Ga0495686_0000132_72376_73320 276
138 3300048904 Ga0496101_0051852 Ga0496101_0051852_1722_2627 276
139 3300048904 Ga0496101_0135919 Ga0496101_0135919_138_1043 276
140 3300048905 Ga0496102_0000051 Ga0496102_0000051_73622_74527 276
141 3300048906 Ga0496103_0000112 Ga0496103_0000112_52925_53830 276
142 3300048907 Ga0496104_0006026 Ga0496104_0006026_6758_7663 276
143 3300048908 Ga0496105_0000648 Ga0496105_0000648_13422_14327 276
144 3300048914 Ga0496111_0005905 Ga0496111_0005905_5495_6400 276
145 3300048917 Ga0496114_0008023 Ga0496114_0008023_1509_2414 276
146 3300048918 Ga0496115_0000026 Ga0496115_0000026_8234_9139 276
147 3300048919 Ga0496116_0006286 Ga0496116_0006286_5434_6339 276
148 3300048920 Ga0496117_0000046 Ga0496117_0000046_56109_57014 276
149 3300048920 Ga0496117_0032605 Ga0496117_0032605_855_1760 276
150 3300048920 Ga0496117_0065110 Ga0496117_0065110_1463_2368 276
151 3300048921 Ga0496118_0000036 Ga0496118_0000036_243866_244771 276
152 3300048921 Ga0496118_0000339 Ga0496118_0000339_77681_78586 276
153 3300048921 Ga0496118_0006982 Ga0496118_0006982_4737_5642 276
154 3300048923 Ga0496120_0004435 Ga0496120_0004435_9780_10685 276
155 3300048924 Ga0496121_0000219 Ga0496121_0000219_73525_74430 276
156 3300048924 Ga0496121_0207399 Ga0496121_0207399_15_920 276
157 3300048925 Ga0496122_0013120 Ga0496122_0013120_3272_4177 276
158 3300048926 Ga0496123_0007653 Ga0496123_0007653_7988_8893 276
159 3300048927 Ga0496124_0000011 Ga0496124_0000011_209344_210249 276
160 3300048928 Ga0496125_0000315 Ga0496125_0000315_74225_75130 276
161 3300048929 Ga0496126_0000128 Ga0496126_0000128_103426_104331 276
162 3300025304 Ga0209257_1005039 Ga0209257_10050398 277
163 3300046558 Ga0495633_0000328 Ga0495633_0000328_17851_18753 277
164 3300048924 Ga0496121_0001411 Ga0496121_0001411_33155_34060 277
165 3300048924 Ga0496121_0047322 Ga0496121_0047322_2173_3078 277
166 3300048924 Ga0496121_0117929 Ga0496121_0117929_14_919 277
167 3300048925 Ga0496122_0028998 Ga0496122_0028998_2800_3705 277
168 3300048926 Ga0496123_0038753 Ga0496123_0038753_2268_3173 277
169 3300048928 Ga0496125_0134607 Ga0496125_0134607_75_980 277
170 3300048929 Ga0496126_0092169 Ga0496126_0092169_183_1088 277
171 3300012475 Ga0157317_1002235 Ga0157317_10022352 278
172 3300025303 Ga0209051_1004217 Ga0209051_10042176 278
173 3300046525 Ga0495663_0003636 Ga0495663_0003636_3140_4042 278
174 3300048929 Ga0496126_0007073 Ga0496126_0007073_2585_3535 278
175 3300003761 Ga0055535_1000102 Ga0055535_100010288 280
176 3300003762 Ga0055542_1000147 Ga0055542_100014730 280
177 3300025228 Ga0209672_100207 Ga0209672_10020741 280
178 3300025242 Ga0209258_100111 Ga0209258_10011129 280
179 3300025254 Ga0209148_1000099 Ga0209148_1000099184 280
180 3300044735 Ga0466968_0003614 Ga0466968_0003614_2142_3056 280
181 3300031911 Ga0307412_10084778 Ga0307412_100847783 281
182 3300046515 Ga0495620_0001035 Ga0495620_0001035_10664_11566 281
183 3300046520 Ga0495637_0022012 Ga0495637_0022012_802_1704 281
184 3300047469 Ga0495673_0001983 Ga0495673_0001983_3793_4695 281
185 3300049569 Ga0501032_0025514 Ga0501032_0025514_2185_3108 281
186 3300049570 Ga0501033_0011653 Ga0501033_0011653_2530_3453 281
187 3300049571 Ga0501034_0004732 Ga0501034_0004732_5248_6171 281
188 3300049572 Ga0501036_0040001 Ga0501036_0040001_723_1646 281
189 3300049822 Ga0501035_0012873 Ga0501035_0012873_2895_3818 281
190 3300049823 Ga0501044_0014593 Ga0501044_0014593_7264_8187 281
191 3300048924 Ga0496121_0031205 Ga0496121_0031205_82_963 287
192 iso_pu_bacteria 2643221717 2644644824 287
193 3300048924 Ga0496121_0000367 Ga0496121_0000367_81905_82855 289
194 iso_pu_bacteria 2585427633 2585992884 290
195 iso_pu_bacteria 2585427634 2586003600 290
196 iso_pu_bacteria 2818991457 2819661468 290
197 3300003752 Ga0055539_1000249 Ga0055539_100024913 291
198 3300003775 Ga0055524_1000010 Ga0055524_1000010131 291
199 3300025263 Ga0209565_1010429 Ga0209565_10104291 291
200 3300025299 Ga0209256_1000007 Ga0209256_1000007509 291
201 3300038443 Ga0395901_0001410 Ga0395901_0001410_4313_5215 291
202 3300046507 Ga0495606_0210699 Ga0495606_0210699_53_1042 291
203 3300048926 Ga0496123_0005475 Ga0496123_0005475_680_1669 291
204 iso_pu_bacteria 2842757796 2842759910 291
205 iso_pu_bacteria 2738541307 2738881385 292
206 iso_pu_bacteria 2852684882 2852687335 292
207 iso_pu_bacteria 2884338543 2884338649 292
208 iso_pu_bacteria 2941471342 2941475251 292
209 iso_pu_bacteria 2821443989 2821448026 293
210 iso_pu_bacteria 2919138771 2919141502 293
211 iso_pu_bacteria 2928968154 2928972075 293
212 iso_pu_bacteria 2984564862 2984568601 293
213 iso_pu_bacteria 643348555 643392321 293
214 3300035695 Ga0373927_0000119 Ga0373927_0000119_28831_29730 294
215 3300037068 Ga0373925_0001658 Ga0373925_0001658_7042_7941 294
216 3300042533 Ga0450901_004990 Ga0450901_004990_68_970 295
217 3300001904 JGI24736J21556_1001580 JGI24736J21556_10015804 296
218 3300010375 Ga0105239_10000524 Ga0105239_1000052427 296
219 3300013104 Ga0157370_10009472 Ga0157370_100094726 296
220 3300013105 Ga0157369_10016891 Ga0157369_100168917 296
221 3300013307 Ga0157372_10037845 Ga0157372_100378457 296
222 3300015261 Ga0182006_1016767 Ga0182006_10167672 296
223 3300021361 Ga0213872_10021500 Ga0213872_100215003 296
224 3300025242 Ga0209258_101053 Ga0209258_1010537 296
225 3300025273 Ga0209673_1029272 Ga0209673_10292722 296
226 3300025292 Ga0209676_1000225 Ga0209676_10002253 296
227 3300025292 Ga0209676_1000782 Ga0209676_100078219 296
228 3300025295 Ga0209564_1000484 Ga0209564_100048412 296
229 3300025298 Ga0209050_1006156 Ga0209050_10061569 296
230 3300025904 Ga0207647_10000002 Ga0207647_10000002251 296
231 3300025913 Ga0207695_10012205 Ga0207695_100122055 296
232 3300028786 Ga0307517_10034804 Ga0307517_100348046 296
233 3300037312 Ga0395899_0020058 Ga0395899_0020058_3858_4760 296
234 3300039447 Ga0436361_0080210 Ga0436361_0080210_2047_2955 296
235 3300044693 Ga0466961_0023578 Ga0466961_0023578_851_1753 296
236 3300044693 Ga0466961_0185008 Ga0466961_0185008_351_1262 296
237 3300045836 Ga0466958_0270659 Ga0466958_0270659_120_1031 296
238 3300046457 Ga0495590_0000004 Ga0495590_0000004_188222_189139 296
239 3300046475 Ga0495639_0019450 Ga0495639_0019450_1199_2116 296
240 3300046507 Ga0495606_0000184 Ga0495606_0000184_95867_96784 296
241 3300046512 Ga0495610_0000210 Ga0495610_0000210_43617_44537 296
242 3300046518 Ga0495631_0000076 Ga0495631_0000076_19401_20321 296
243 3300046557 Ga0495622_0000074 Ga0495622_0000074_17354_18271 296
244 3300046660 Ga0495625_0028739 Ga0495625_0028739_1652_2566 296
245 3300046810 Ga0495660_0004038 Ga0495660_0004038_5508_6428 296
246 3300047443 Ga0495687_003269 Ga0495687_003269_7752_8669 296
247 3300047472 Ga0495686_0000028 Ga0495686_0000028_203728_204618 296
248 3300047472 Ga0495686_0006682 Ga0495686_0006682_5182_6213 296
249 3300048905 Ga0496102_0002410 Ga0496102_0002410_14890_15807 296
250 3300048905 Ga0496102_0573433 Ga0496102_0573433_120_1010 296
251 3300048919 Ga0496116_0162139 Ga0496116_0162139_144_1034 296
252 3300048920 Ga0496117_0051927 Ga0496117_0051927_1044_1934 296
253 3300048921 Ga0496118_0000608 Ga0496118_0000608_12540_13430 296
254 3300048921 Ga0496118_0000810 Ga0496118_0000810_42474_43364 296
255 3300048924 Ga0496121_0000078 Ga0496121_0000078_190556_191530 296
256 3300048924 Ga0496121_0000246 Ga0496121_0000246_28691_29581 296
257 3300048925 Ga0496122_0038657 Ga0496122_0038657_2314_3204 296
258 3300048926 Ga0496123_0033455 Ga0496123_0033455_1870_2760 296
259 3300048928 Ga0496125_0000525 Ga0496125_0000525_64171_65076 296
260 3300048929 Ga0496126_0003798 Ga0496126_0003798_8960_9934 296
261 3300048929 Ga0496126_0095844 Ga0496126_0095844_845_1735 296
262 3300049582 Ga0501048_0102529 Ga0501048_0102529_404_1324 296
263 iso_pu_bacteria 2747842428 2747949533 296

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

256

335

0.98

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

243

284

0.93

PF12852

Cupin_6

Cupin

42

220

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9306 196 292
3lsg-assembly2.cif.gz_D the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9297 196 284
3lsg-assembly3.cif.gz_E the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.927 196 283
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.9108 194 294
1bl0-assembly1.cif.gz_A multiple antibiotic resistance protein (mara)/dna complex 0.9081 192 292
ID Description Score Start End Superfamily
3lsgA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9452 250 292 1.10.10.60
af_P32677_219_275_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.937 246 295 1.10.10.60
1d5yD02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9293 246 293 1.10.10.60
1bl0A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9191 249 292 1.10.10.60
3w6vA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9108 194 294 1.10.10.60
ID Description Score Start End GO Terms
AF-U7UN89-F1-model_v4 DNA-binding helix-turn-helix protein 0.9583 205 296 GO:0003700
GO:0043565
AF-A0A3B0CBZ5-F1-model_v4 AraC family transcriptional regulator 0.936 199 295 GO:0003700
GO:0016020
GO:0043565
AF-A0A7C6P112-F1-model_v4 Stage 0 sporulation protein A homolog 0.934 198 296 GO:0000160
GO:0003700
GO:0043565
AF-S9QGN2-F1-model_v4 Transcriptional regulator, AraC family 0.9321 1 295 GO:0003700
GO:0043565
AF-A0A8B1B359-F1-model_v4 deleted 0.9316 200 294

Feature Viewer

pLDDT pTM Quality
93.08 0.88 High
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Predicted Structure (AlphaFold2)

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