F371737

General Info

Members Datasets Scaffolds Average Seq Length
263 154 259 355

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100005543|Ga0068860_1000055433
Length 391
Sequence MSLTQSFHIPVQRAYPSRLHEVDWENLEFGKYFTDHMLICDYEDGQWKEPQIIPFGDFRLSPVALALHYGQTIFEGMKAFRMDVRPTGPSKNIPRSPERTNVCPSDDEPPVRPGDGSINIFRPEKHYDRMVLTCERMCMPAVPREVFIEGLHQLIDLDRNWVPGEEGSALYIRPFMIATEARLRVKVSESYRFAIVASPTGNYFQQPVRVKVERDFVRAARGGTGYAKCGGNYGASMYPTQKAKEEGYDQVLWTDGQTHRYIEESGAMNVFFVLDGTLVTPPLSDSILDGVTRDSLLKLAQRDGIPIAERPVDVEELKEAFKKGTITEAFGAGTAAVISPIGVIGIDGNDYTLPASGTGSARSIGAQLKDALDNIRYGREADTEEWNFIVK

Samples

Sample ID Description Type Environment
1 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
2 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
3 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
4 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
24 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
25 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
45 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
74 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
113 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
114 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
115 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
116 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
120 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
121 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
122 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
123 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
124 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
125 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
126 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
127 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
128 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
129 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
130 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
131 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
134 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
135 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
136 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
143 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
146 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
147 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
148 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
149 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
150 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
151 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
152 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
153 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
154 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.1
Metatranscriptomes 0
Isolates 1.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.42
Nodule 0
Rhizoplane 0.76
Rhizosphere 90.87
Stem 0
Stem Tuber 0
Unclassified 4.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10107883 3300003316 Bacteria 6488
2 rootH2_10091333 3300003320 Bacteria 1895
3 rootL2_10057291 3300003322 Bacteria 13604
4 rootL2_10297457 3300003322 Bacteria 2845
5 rootH1_10007579 3300003316 Bacteria 6207
6 rootH1_10007579 3300003323 Bacteria 11250
7 rootH1_10171946 3300003323 Bacteria 3798
8 rootH1_10281812 3300003323 Unclassified 2896
9 Ga0070676_10059896 3300005328 Bacteria 2259
10 Ga0070690_100046972 3300005330 Bacteria 2746
11 Ga0070690_100079509 3300005330 Unclassified 2144
12 Ga0070690_100138003 3300005330 Bacteria 1653
13 Ga0070670_100015785 3300005331 Bacteria 6483
14 Ga0070670_100019912 3300005331 Bacteria 5761
15 Ga0068869_100003522 3300005334 Bacteria 9605
16 Ga0068869_100201453 3300005334 Bacteria 1570
17 Ga0070666_10001494 3300005335 Bacteria 14210
18 Ga0070666_10013744 3300005335 Bacteria 5141
19 Ga0070666_10110813 3300005335 Bacteria 1898
20 Ga0070682_100011967 3300005337 Bacteria 4964
21 Ga0068868_100039733 3300005338 Unclassified 3658
22 Ga0068868_100045495 3300005338 Bacteria 3434
23 Ga0068868_100079232 3300005338 Bacteria 2631
24 Ga0070689_100007469 3300005340 Bacteria 7645
25 Ga0070689_100044901 3300005340 Bacteria 3401
26 Ga0070687_100036130 3300005343 Bacteria 2459
27 Ga0070661_100105167 3300005344 Unclassified 2104
28 Ga0070661_100155461 3300005344 Bacteria 1730
29 Ga0070668_100048464 3300005347 Bacteria 3267
30 Ga0070669_100013153 3300005353 Bacteria 5883
31 Ga0070675_100137271 3300005354 Unclassified 2087
32 Ga0070675_100142682 3300005354 Bacteria 2048
33 Ga0070671_100173837 3300005355 Unclassified 1822
34 Ga0070674_100072778 3300005356 Unclassified 2435
35 Ga0070673_100014390 3300005364 Bacteria 5507
36 Ga0070673_100174744 3300005364 Bacteria 1835
37 Ga0070688_100123706 3300005365 Unclassified 1736
38 Ga0070667_100128892 3300005367 Unclassified 2207
39 Ga0070678_100078103 3300005456 Bacteria 2500
40 Ga0070678_100187451 3300005456 Bacteria 1698
41 Ga0070662_100267898 3300005457 Unclassified 1378
42 Ga0070662_100277838 3300005457 Bacteria 1355
43 Ga0070662_100286078 3300005457 Bacteria 1335
44 Ga0068867_100022805 3300005459 Unclassified 4479
45 Ga0068867_100121096 3300005459 Bacteria 2022
46 Ga0068867_100198128 3300005459 Bacteria 1606
47 Ga0070685_10214892 3300005466 Bacteria 1257
48 Ga0070684_100006236 3300005535 Bacteria 9203
49 Ga0070684_100036939 3300005535 Bacteria 4188
50 Ga0068853_100222388 3300005539 Bacteria 1725
51 Ga0068853_100368527 3300005539 Bacteria 1340
52 Ga0070672_100034329 3300005543 Bacteria 3849
53 Ga0070686_100035811 3300005544 Bacteria 3068
54 Ga0070686_100087025 3300005544 Unclassified 2082
55 Ga0070686_100129638 3300005544 Unclassified 1742
56 Ga0070665_100000002 3300005548 Bacteria 849037
57 Ga0070665_100009994 3300005548 Bacteria 9599
58 Ga0068855_100001926 3300005563 Bacteria 25763
59 Ga0068855_100031075 3300005563 Bacteria 6380
60 Ga0068855_100184416 3300005563 Bacteria 2358
61 Ga0070664_100036412 3300005564 Bacteria 4134
62 Ga0070664_100067654 3300005564 Bacteria 3053
63 Ga0068857_100035546 3300005577 Bacteria 4412
64 Ga0068857_100089552 3300005577 Unclassified 2753
65 Ga0068854_100064193 3300005578 Bacteria 2668
66 Ga0068856_100041269 3300005614 Bacteria 4534
67 Ga0068856_100076578 3300005614 Bacteria 3314
68 Ga0068852_100002026 3300005616 Bacteria 13801
69 Ga0068852_100111115 3300005616 Bacteria 2492
70 Ga0068859_100010105 3300005617 Bacteria 9512
71 Ga0068859_100074989 3300005617 Bacteria 3422
72 Ga0068859_100457858 3300005617 Bacteria 1372
73 Ga0068864_100005936 3300005618 Bacteria 10014
74 Ga0068866_10085724 3300005718 Bacteria 1703
75 Ga0068870_10022788 3300005840 Bacteria 3081
76 Ga0068870_10037712 3300005840 Unclassified 2492
77 Ga0068863_100021592 3300005841 Bacteria 6140
78 Ga0068863_100022566 3300005841 Bacteria 6010
79 Ga0068863_100276681 3300005841 Bacteria 1626
80 Ga0068858_100292260 3300005842 Unclassified 1553
81 Ga0068860_100000003 3300005843 Bacteria 575741
82 Ga0068860_100005543 3300005843 Bacteria 12778
83 Ga0068860_100035638 3300005843 Bacteria 4771
84 Ga0068862_100227247 3300005844 Bacteria 1692
85 Ga0068871_100028640 3300006358 Bacteria 4369
86 Ga0068871_100303272 3300006358 Bacteria 1402
87 Ga0068871_100369773 3300006358 Bacteria 1271
88 Ga0075429_100080305 3300006880 Bacteria 2843
89 Ga0068865_100256473 3300006881 Bacteria 1383
90 Ga0097620_100010105 3300006931 Bacteria 9512
91 Ga0097620_100074992 3300006931 Bacteria 3422
92 Ga0097620_100457846 3300006931 Bacteria 1372
93 Ga0105240_10000888 3300009093 Bacteria 53670
94 Ga0105240_10000896 3300009093 Bacteria 53128
95 Ga0105240_10001815 3300009093 Bacteria 35856
96 Ga0105240_10007449 3300009093 Bacteria 15884
97 Ga0105240_10014187 3300009093 Bacteria 10883
98 Ga0105240_10015094 3300009093 Bacteria 10515
99 Ga0111539_10012452 3300009094 Bacteria 10662
100 Ga0105247_10004320 3300009101 Bacteria 9081
101 Ga0105241_10001109 3300009174 Bacteria 20498
102 Ga0105241_10016747 3300009174 Bacteria 5378
103 Ga0105242_10166676 3300009176 Bacteria 1933
104 Ga0105237_10000636 3300009545 Bacteria 49001
105 Ga0105237_10006272 3300009545 Bacteria 13225
106 Ga0105237_10018217 3300009545 Bacteria 7266
107 Ga0105237_10068714 3300009545 Bacteria 3537
108 Ga0105237_10288224 3300009545 Bacteria 1644
109 Ga0105238_10000195 3300009551 Bacteria 67049
110 Ga0105238_10073794 3300009551 Bacteria 3405
111 Ga0105239_10000235 3300010375 Bacteria 81782
112 Ga0105239_10002137 3300010375 Bacteria 25435
113 Ga0105246_10044038 3300011119 Unclassified 3031
114 Ga0157370_10020881 3300013104 Bacteria 6534
115 Ga0157374_10000013 3300013296 Bacteria 461240
116 Ga0157374_10000411 3300013296 Bacteria 38796
117 Ga0157374_10004791 3300013296 Bacteria 11352
118 Ga0157374_10011030 3300013296 Bacteria 7804
119 Ga0157374_10133903 3300013296 Bacteria 2401
120 Ga0157378_10002479 3300013297 Bacteria 16428
121 Ga0157378_10246077 3300013297 Unclassified 1710
122 Ga0157378_10365231 3300013297 Unclassified 1414
123 Ga0163162_10000260 3300013306 Bacteria 48090
124 Ga0163162_10029725 3300013306 Bacteria 5408
125 Ga0163162_10208839 3300013306 Bacteria 2082
126 Ga0157372_10001213 3300013307 Bacteria 27887
127 Ga0157372_10003266 3300013307 Bacteria 17520
128 Ga0157372_10249206 3300013307 Bacteria 2061
129 Ga0157375_10136731 3300013308 Unclassified 2575
130 Ga0163163_10001665 3300014325 Bacteria 18727
131 Ga0163163_10027776 3300014325 Bacteria 5425
132 Ga0163163_10185895 3300014325 Unclassified 2126
133 Ga0157380_10136462 3300014326 Bacteria 2100
134 Ga0157377_10024769 3300014745 Bacteria 3193
135 Ga0157376_10001730 3300014969 Bacteria 14525
136 Ga0157376_10002908 3300014969 Bacteria 11748
137 Ga0157376_10082713 3300014969 Bacteria 2759
138 Ga0213876_10014061 3300021384 Bacteria 4244
139 Ga0207656_10095869 3300025321 Unclassified 1353
140 Ga0207642_10067524 3300025899 Bacteria 1688
141 Ga0207642_10116402 3300025899 Bacteria 1371
142 Ga0207710_10001954 3300025900 Bacteria 9853
143 Ga0207688_10005453 3300025901 Bacteria 6914
144 Ga0207688_10013331 3300025901 Bacteria 4466
145 Ga0207680_10018733 3300025903 Unclassified 3688
146 Ga0207680_10125625 3300025903 Bacteria 1684
147 Ga0207680_10154804 3300025903 Bacteria 1531
148 Ga0207645_10000920 3300025907 Bacteria 24452
149 Ga0207645_10033845 3300025907 Bacteria 3284
150 Ga0207643_10023171 3300025908 Bacteria 3423
151 Ga0207695_10000066 3300025913 Bacteria 334103
152 Ga0207695_10000584 3300025913 Bacteria 73948
153 Ga0207695_10000725 3300025913 Bacteria 64078
154 Ga0207695_10049984 3300025913 Bacteria 4401
155 Ga0207695_10276062 3300025913 Bacteria 1575
156 Ga0207671_10022661 3300025914 Bacteria 4745
157 Ga0207671_10033375 3300025914 Bacteria 3829
158 Ga0207662_10201689 3300025918 Unclassified 1288
159 Ga0207649_10001858 3300025920 Bacteria 12067
160 Ga0207681_10311403 3300025923 Bacteria 1249
161 Ga0207694_10000780 3300025924 Bacteria 28623
162 Ga0207694_10089302 3300025924 Bacteria 2430
163 Ga0207650_10351577 3300025925 Bacteria 1212
164 Ga0207659_10066684 3300025926 Unclassified 2613
165 Ga0207659_10279550 3300025926 Unclassified 1364
166 Ga0207644_10048816 3300025931 Unclassified 3028
167 Ga0207706_10005770 3300025933 Bacteria 11520
168 Ga0207706_10016438 3300025933 Bacteria 6680
169 Ga0207686_10114721 3300025934 Unclassified 1823
170 Ga0207686_10182123 3300025934 Bacteria 1490
171 Ga0207670_10007008 3300025936 Bacteria 6276
172 Ga0207691_10011397 3300025940 Bacteria 8533
173 Ga0207691_10012401 3300025940 Bacteria 8171
174 Ga0207689_10001907 3300025942 Bacteria 19712
175 Ga0207689_10007199 3300025942 Bacteria 9772
176 Ga0207689_10009623 3300025942 Bacteria 8333
177 Ga0207689_10037852 3300025942 Bacteria 3998
178 Ga0207679_10029802 3300025945 Bacteria 3803
179 Ga0207679_10040037 3300025945 Unclassified 3352
180 Ga0207667_10011413 3300025949 Bacteria 10327
181 Ga0207667_10030659 3300025949 Bacteria 5814
182 Ga0207667_10115073 3300025949 Bacteria 2772
183 Ga0207667_10146262 3300025949 Bacteria 2433
184 Ga0207651_10104596 3300025960 Unclassified 2110
185 Ga0207651_10139635 3300025960 Unclassified 1869
186 Ga0207651_10263098 3300025960 Bacteria 1417
187 Ga0207640_10024724 3300025981 Bacteria 3628
188 Ga0207640_10098797 3300025981 Unclassified 2042
189 Ga0207658_10090958 3300025986 Unclassified 2366
190 Ga0207658_10111643 3300025986 Bacteria 2162
191 Ga0207658_10327248 3300025986 Unclassified 1328
192 Ga0207677_10325387 3300026023 Unclassified 1279
193 Ga0207703_10306420 3300026035 Unclassified 1450
194 Ga0207639_10092284 3300026041 Bacteria 2426
195 Ga0207702_10029640 3300026078 Bacteria 4555
196 Ga0207641_10001379 3300026088 Bacteria 23962
197 Ga0207641_10056774 3300026088 Bacteria 3328
198 Ga0207641_10260597 3300026088 Bacteria 1623
199 Ga0207641_10338091 3300026088 Bacteria 1432
200 Ga0207648_10005735 3300026089 Bacteria 12444
201 Ga0207648_10107643 3300026089 Bacteria 2447
202 Ga0207676_10056281 3300026095 Unclassified 3091
203 Ga0207674_10031748 3300026116 Bacteria 5545
204 Ga0207674_10137880 3300026116 Unclassified 2400
205 Ga0207683_10002839 3300026121 Bacteria 15129
206 Ga0207683_10108485 3300026121 Bacteria 2484
207 Ga0207698_10133393 3300026142 Bacteria 2126
208 Ga0207698_10237584 3300026142 Unclassified 1658
209 Ga0268266_10000073 3300028379 Bacteria 232074
210 Ga0268264_10000063 3300028381 Bacteria 301702
211 Ga0307517_10058023 3300028786 Bacteria 3738
212 Ga0307515_10074291 3300028794 Unclassified 4550
213 Ga0307511_10000245 3300030521 Bacteria 55418
214 Ga0265316_10004232 3300031344 Bacteria 14338
215 Ga0373925_0099478 3300037068 Bacteria 2234
216 Ga0395905_0017279 3300037471 Bacteria 6852
217 Ga0436365_1467510 3300039437 Bacteria 9839
218 Ga0439439_0009971 3300041406 Bacteria 2266
219 Ga0439449_0005386 3300042007 Bacteria 4903
220 Ga0439449_0059519 3300042007 Bacteria 1410
221 Ga0439457_000137 3300042014 Bacteria 18567
222 Ga0466972_0001496 3300044658 Bacteria 11378
223 Ga0466972_0003725 3300044658 Bacteria 7582
224 Ga0466964_0011514 3300044706 Bacteria 3342
225 Ga0453684_0090011 3300044712 Bacteria 3792
226 Ga0453684_0369956 3300044712 Unclassified 1611
227 Ga0466970_0191236 3300044765 Bacteria 1137
228 Ga0466957_0010595 3300044842 Bacteria 5299
229 Ga0466960_0151530 3300044901 Bacteria 1239
230 Ga0466959_0001204 3300045049 Bacteria 15621
231 Ga0495638_0038963 3300046460 Bacteria 3019
232 Ga0495668_0000329 3300046616 Bacteria 64703
233 Ga0495611_0014611 3300046648 Bacteria 3357
234 Ga0495625_0054830 3300046660 Bacteria 2846
235 Ga0495676_0150353 3300047321 Unclassified 1658
236 Ga0495687_000040 3300047443 Bacteria 230786
237 Ga0496110_0005685 3300048913 Bacteria 9793
238 Ga0496110_0112412 3300048913 Bacteria 2449
239 Ga0501032_0016427 3300049569 Bacteria 5206
240 Ga0501034_0000043 3300049571 Bacteria 229049
241 Ga0501034_0028154 3300049571 Bacteria 5716
242 Ga0501039_0320603 3300049575 Unclassified 1218
243 Ga0501043_0000957 3300049579 Bacteria 25588
244 Ga0501046_0076827 3300049580 Bacteria 2586
245 Ga0501074_0021573 3300049590 Bacteria 4676
246 Ga0501257_006639 3300049686 Bacteria 2569
247 Ga0501257_007370 3300049686 Bacteria 2457
248 Ga0501083_0021665 3300049744 Bacteria 4463
249 Ga0501044_0009900 3300049823 Bacteria 10360
250 Ga0500578_0037177 3300053086 Bacteria 3127
251 Ga0500646_0012606 3300053090 Bacteria 2183
252 Ga0500583_0016095 3300053092 Bacteria 2978
253 Ga0500583_0053270 3300053092 Bacteria 1886
254 Ga0500594_0005994 3300053118 Bacteria 2714
255 Ga0500568_0028300 3300053139 Bacteria 2337
256 Ga0500604_0015742 3300053151 Bacteria 2075
257 Ga0500616_0006326 3300053153 Bacteria 7776
258 Ga0500622_0000712 3300053156 Bacteria 29089
259 Ga0466962_0034354 3300061719 Bacteria 2427

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009545 Ga0105237_10000636 Ga0105237_1000063610 310
2 3300009551 Ga0105238_10073794 Ga0105238_100737942 321
3 3300013104 Ga0157370_10020881 Ga0157370_100208813 321
4 3300013307 Ga0157372_10001213 Ga0157372_1000121311 321
5 3300025924 Ga0207694_10089302 Ga0207694_100893022 321
6 3300044765 Ga0466970_0191236 Ga0466970_0191236_108_1088 321
7 3300045049 Ga0466959_0001204 Ga0466959_0001204_768_1748 321
8 3300061719 Ga0466962_0034354 Ga0466962_0034354_1267_2247 321
9 3300025934 Ga0207686_10182123 Ga0207686_101821232 327
10 3300003323 rootH1_10281812 rootH1_102818122 329
11 3300003322 rootL2_10057291 rootL2_100572919 332
12 3300046660 Ga0495625_0054830 Ga0495625_0054830_1742_2752 336
13 3300047443 Ga0495687_000040 Ga0495687_000040_69578_70588 336
14 3300009093 Ga0105240_10007449 Ga0105240_100074495 344
15 3300009545 Ga0105237_10006272 Ga0105237_1000627212 344
16 3300010375 Ga0105239_10000235 Ga0105239_1000023565 344
17 3300025914 Ga0207671_10033375 Ga0207671_100333753 346
18 iso_pu_bacteria 2852623160 2852624369 346
19 3300053139 Ga0500568_0028300 Ga0500568_0028300_1009_2052 347
20 iso_pu_bacteria 2852627209 2852629223 348
21 iso_pu_bacteria 2884933994 2884936653 348
22 3300013306 Ga0163162_10000260 Ga0163162_1000026026 349
23 3300025918 Ga0207662_10201689 Ga0207662_102016892 350
24 3300049571 Ga0501034_0000043 Ga0501034_0000043_75391_76446 350
25 iso_pu_bacteria 2739367866 2740031202 350
26 iso_pu_bacteria 8055588893 8055589953 350
27 3300005331 Ga0070670_100015785 Ga0070670_1000157857 352
28 3300005334 Ga0068869_100201453 Ga0068869_1002014532 352
29 3300005335 Ga0070666_10013744 Ga0070666_100137442 352
30 3300005338 Ga0068868_100079232 Ga0068868_1000792321 352
31 3300005347 Ga0070668_100048464 Ga0070668_1000484643 352
32 3300005353 Ga0070669_100013153 Ga0070669_1000131534 352
33 3300005354 Ga0070675_100142682 Ga0070675_1001426822 352
34 3300005456 Ga0070678_100078103 Ga0070678_1000781032 352
35 3300005459 Ga0068867_100121096 Ga0068867_1001210962 352
36 3300005539 Ga0068853_100368527 Ga0068853_1003685271 352
37 3300005548 Ga0070665_100009994 Ga0070665_10000999410 352
38 3300005578 Ga0068854_100064193 Ga0068854_1000641933 352
39 3300005617 Ga0068859_100010105 Ga0068859_10001010512 352
40 3300005718 Ga0068866_10085724 Ga0068866_100857241 352
41 3300005840 Ga0068870_10022788 Ga0068870_100227882 352
42 3300005843 Ga0068860_100035638 Ga0068860_1000356382 352
43 3300006358 Ga0068871_100028640 Ga0068871_1000286405 352
44 3300006881 Ga0068865_100256473 Ga0068865_1002564732 352
45 3300006931 Ga0097620_100010105 Ga0097620_10001010512 352
46 3300009176 Ga0105242_10166676 Ga0105242_101666761 352
47 3300013296 Ga0157374_10133903 Ga0157374_101339032 352
48 3300013306 Ga0163162_10208839 Ga0163162_102088392 352
49 3300025899 Ga0207642_10067524 Ga0207642_100675241 352
50 3300025901 Ga0207688_10013331 Ga0207688_100133312 352
51 3300025903 Ga0207680_10154804 Ga0207680_101548042 352
52 3300025907 Ga0207645_10000920 Ga0207645_1000092026 352
53 3300025908 Ga0207643_10023171 Ga0207643_100231712 352
54 3300025940 Ga0207691_10011397 Ga0207691_100113972 352
55 3300025942 Ga0207689_10001907 Ga0207689_100019071 352
56 3300025960 Ga0207651_10263098 Ga0207651_102630981 352
57 3300026089 Ga0207648_10107643 Ga0207648_101076432 352
58 3300026121 Ga0207683_10002839 Ga0207683_100028399 352
59 3300005343 Ga0070687_100036130 Ga0070687_1000361302 353
60 3300009101 Ga0105247_10004320 Ga0105247_100043208 353
61 3300013307 Ga0157372_10249206 Ga0157372_102492063 353
62 3300025900 Ga0207710_10001954 Ga0207710_100019545 353
63 3300003322 rootL2_10297457 rootL2_102974573 354
64 3300003323 rootH1_10007579 rootH1_100075797 354
65 3300003323 rootH1_10171946 rootH1_101719463 354
66 3300005328 Ga0070676_10059896 Ga0070676_100598962 354
67 3300005330 Ga0070690_100046972 Ga0070690_1000469721 354
68 3300005330 Ga0070690_100079509 Ga0070690_1000795091 354
69 3300005330 Ga0070690_100138003 Ga0070690_1001380032 354
70 3300005334 Ga0068869_100003522 Ga0068869_1000035228 354
71 3300005335 Ga0070666_10001494 Ga0070666_100014948 354
72 3300005335 Ga0070666_10110813 Ga0070666_101108132 354
73 3300005337 Ga0070682_100011967 Ga0070682_1000119672 354
74 3300005338 Ga0068868_100039733 Ga0068868_1000397332 354
75 3300005338 Ga0068868_100045495 Ga0068868_1000454951 354
76 3300005340 Ga0070689_100007469 Ga0070689_1000074698 354
77 3300005340 Ga0070689_100044901 Ga0070689_1000449011 354
78 3300005344 Ga0070661_100105167 Ga0070661_1001051673 354
79 3300005344 Ga0070661_100155461 Ga0070661_1001554611 354
80 3300005354 Ga0070675_100137271 Ga0070675_1001372711 354
81 3300005355 Ga0070671_100173837 Ga0070671_1001738373 354
82 3300005356 Ga0070674_100072778 Ga0070674_1000727781 354
83 3300005364 Ga0070673_100014390 Ga0070673_1000143902 354
84 3300005364 Ga0070673_100174744 Ga0070673_1001747441 354
85 3300005365 Ga0070688_100123706 Ga0070688_1001237062 354
86 3300005367 Ga0070667_100128892 Ga0070667_1001288923 354
87 3300005456 Ga0070678_100187451 Ga0070678_1001874512 354
88 3300005457 Ga0070662_100267898 Ga0070662_1002678981 354
89 3300005457 Ga0070662_100277838 Ga0070662_1002778381 354
90 3300005457 Ga0070662_100286078 Ga0070662_1002860781 354
91 3300005459 Ga0068867_100022805 Ga0068867_1000228052 354
92 3300005459 Ga0068867_100198128 Ga0068867_1001981282 354
93 3300005466 Ga0070685_10214892 Ga0070685_102148921 354
94 3300005535 Ga0070684_100006236 Ga0070684_1000062369 354
95 3300005535 Ga0070684_100036939 Ga0070684_1000369394 354
96 3300005543 Ga0070672_100034329 Ga0070672_1000343292 354
97 3300005544 Ga0070686_100035811 Ga0070686_1000358112 354
98 3300005544 Ga0070686_100087025 Ga0070686_1000870251 354
99 3300005544 Ga0070686_100129638 Ga0070686_1001296381 354
100 3300005563 Ga0068855_100001926 Ga0068855_10000192625 354
101 3300005563 Ga0068855_100031075 Ga0068855_1000310755 354
102 3300005564 Ga0070664_100036412 Ga0070664_1000364124 354
103 3300005564 Ga0070664_100067654 Ga0070664_1000676542 354
104 3300005577 Ga0068857_100089552 Ga0068857_1000895523 354
105 3300005614 Ga0068856_100076578 Ga0068856_1000765782 354
106 3300005616 Ga0068852_100111115 Ga0068852_1001111153 354
107 3300005617 Ga0068859_100074989 Ga0068859_1000749894 354
108 3300005617 Ga0068859_100457858 Ga0068859_1004578581 354
109 3300005618 Ga0068864_100005936 Ga0068864_1000059362 354
110 3300005840 Ga0068870_10037712 Ga0068870_100377124 354
111 3300005841 Ga0068863_100021592 Ga0068863_1000215922 354
112 3300005841 Ga0068863_100022566 Ga0068863_1000225664 354
113 3300005841 Ga0068863_100276681 Ga0068863_1002766811 354
114 3300005842 Ga0068858_100292260 Ga0068858_1002922602 354
115 3300005844 Ga0068862_100227247 Ga0068862_1002272472 354
116 3300006358 Ga0068871_100303272 Ga0068871_1003032722 354
117 3300006358 Ga0068871_100369773 Ga0068871_1003697731 354
118 3300006880 Ga0075429_100080305 Ga0075429_1000803053 354
119 3300006931 Ga0097620_100074992 Ga0097620_1000749924 354
120 3300006931 Ga0097620_100457846 Ga0097620_1004578461 354
121 3300009094 Ga0111539_10012452 Ga0111539_100124526 354
122 3300009174 Ga0105241_10016747 Ga0105241_100167472 354
123 3300009545 Ga0105237_10068714 Ga0105237_100687142 354
124 3300011119 Ga0105246_10044038 Ga0105246_100440382 354
125 3300013296 Ga0157374_10000411 Ga0157374_1000041142 354
126 3300013296 Ga0157374_10004791 Ga0157374_1000479111 354
127 3300013296 Ga0157374_10011030 Ga0157374_100110302 354
128 3300013297 Ga0157378_10002479 Ga0157378_1000247912 354
129 3300013297 Ga0157378_10246077 Ga0157378_102460771 354
130 3300013297 Ga0157378_10365231 Ga0157378_103652312 354
131 3300013306 Ga0163162_10029725 Ga0163162_100297256 354
132 3300013307 Ga0157372_10003266 Ga0157372_1000326614 354
133 3300013308 Ga0157375_10136731 Ga0157375_101367314 354
134 3300014325 Ga0163163_10001665 Ga0163163_100016659 354
135 3300014325 Ga0163163_10027776 Ga0163163_100277761 354
136 3300014325 Ga0163163_10185895 Ga0163163_101858952 354
137 3300014326 Ga0157380_10136462 Ga0157380_101364622 354
138 3300014745 Ga0157377_10024769 Ga0157377_100247691 354
139 3300014969 Ga0157376_10002908 Ga0157376_100029086 354
140 3300014969 Ga0157376_10082713 Ga0157376_100827131 354
141 3300021384 Ga0213876_10014061 Ga0213876_100140614 354
142 3300025321 Ga0207656_10095869 Ga0207656_100958691 354
143 3300025899 Ga0207642_10116402 Ga0207642_101164022 354
144 3300025901 Ga0207688_10005453 Ga0207688_100054536 354
145 3300025903 Ga0207680_10018733 Ga0207680_100187332 354
146 3300025903 Ga0207680_10125625 Ga0207680_101256252 354
147 3300025907 Ga0207645_10033845 Ga0207645_100338452 354
148 3300025920 Ga0207649_10001858 Ga0207649_100018588 354
149 3300025923 Ga0207681_10311403 Ga0207681_103114031 354
150 3300025926 Ga0207659_10066684 Ga0207659_100666841 354
151 3300025926 Ga0207659_10279550 Ga0207659_102795501 354
152 3300025931 Ga0207644_10048816 Ga0207644_100488163 354
153 3300025933 Ga0207706_10005770 Ga0207706_1000577012 354
154 3300025933 Ga0207706_10016438 Ga0207706_100164385 354
155 3300025934 Ga0207686_10114721 Ga0207686_101147212 354
156 3300025936 Ga0207670_10007008 Ga0207670_100070084 354
157 3300025940 Ga0207691_10012401 Ga0207691_100124016 354
158 3300025942 Ga0207689_10007199 Ga0207689_100071999 354
159 3300025942 Ga0207689_10009623 Ga0207689_100096235 354
160 3300025942 Ga0207689_10037852 Ga0207689_100378524 354
161 3300025945 Ga0207679_10029802 Ga0207679_100298022 354
162 3300025945 Ga0207679_10040037 Ga0207679_100400374 354
163 3300025949 Ga0207667_10011413 Ga0207667_100114138 354
164 3300025949 Ga0207667_10115073 Ga0207667_101150732 354
165 3300025960 Ga0207651_10104596 Ga0207651_101045962 354
166 3300025960 Ga0207651_10139635 Ga0207651_101396352 354
167 3300025981 Ga0207640_10024724 Ga0207640_100247242 354
168 3300025981 Ga0207640_10098797 Ga0207640_100987972 354
169 3300025986 Ga0207658_10090958 Ga0207658_100909582 354
170 3300025986 Ga0207658_10111643 Ga0207658_101116431 354
171 3300025986 Ga0207658_10327248 Ga0207658_103272481 354
172 3300026023 Ga0207677_10325387 Ga0207677_103253871 354
173 3300026035 Ga0207703_10306420 Ga0207703_103064201 354
174 3300026041 Ga0207639_10092284 Ga0207639_100922842 354
175 3300026078 Ga0207702_10029640 Ga0207702_100296405 354
176 3300026088 Ga0207641_10001379 Ga0207641_100013794 354
177 3300026088 Ga0207641_10056774 Ga0207641_100567744 354
178 3300026088 Ga0207641_10260597 Ga0207641_102605971 354
179 3300026088 Ga0207641_10338091 Ga0207641_103380911 354
180 3300026089 Ga0207648_10005735 Ga0207648_100057352 354
181 3300026095 Ga0207676_10056281 Ga0207676_100562813 354
182 3300026116 Ga0207674_10031748 Ga0207674_100317487 354
183 3300026116 Ga0207674_10137880 Ga0207674_101378802 354
184 3300026121 Ga0207683_10108485 Ga0207683_101084852 354
185 3300026142 Ga0207698_10237584 Ga0207698_102375841 354
186 3300031344 Ga0265316_10004232 Ga0265316_100042323 354
187 3300037068 Ga0373925_0099478 Ga0373925_0099478_176_1240 354
188 3300039437 Ga0436365_1467510 Ga0436365_1467510_852_1916 354
189 3300041406 Ga0439439_0009971 Ga0439439_0009971_1122_2186 354
190 3300042007 Ga0439449_0005386 Ga0439449_0005386_192_1256 354
191 3300042007 Ga0439449_0059519 Ga0439449_0059519_157_1221 354
192 3300042014 Ga0439457_000137 Ga0439457_000137_15800_16864 354
193 3300044658 Ga0466972_0001496 Ga0466972_0001496_2443_3507 354
194 3300044842 Ga0466957_0010595 Ga0466957_0010595_794_1858 354
195 3300046616 Ga0495668_0000329 Ga0495668_0000329_60378_61451 354
196 3300047321 Ga0495676_0150353 Ga0495676_0150353_494_1558 354
197 3300048913 Ga0496110_0005685 Ga0496110_0005685_3977_5041 354
198 3300048913 Ga0496110_0112412 Ga0496110_0112412_634_1698 354
199 3300049569 Ga0501032_0016427 Ga0501032_0016427_831_1895 354
200 3300049571 Ga0501034_0028154 Ga0501034_0028154_2172_3236 354
201 3300049575 Ga0501039_0320603 Ga0501039_0320603_142_1206 354
202 3300049579 Ga0501043_0000957 Ga0501043_0000957_878_1942 354
203 3300049580 Ga0501046_0076827 Ga0501046_0076827_102_1166 354
204 3300049590 Ga0501074_0021573 Ga0501074_0021573_552_1616 354
205 3300049744 Ga0501083_0021665 Ga0501083_0021665_167_1231 354
206 3300049823 Ga0501044_0009900 Ga0501044_0009900_199_1263 354
207 3300053086 Ga0500578_0037177 Ga0500578_0037177_1526_2590 354
208 3300053092 Ga0500583_0053270 Ga0500583_0053270_715_1779 354
209 3300053118 Ga0500594_0005994 Ga0500594_0005994_1139_2203 354
210 3300053151 Ga0500604_0015742 Ga0500604_0015742_518_1582 354
211 3300053153 Ga0500616_0006326 Ga0500616_0006326_2788_3861 354
212 3300003320 rootH2_10091333 rootH2_100913332 355
213 3300028794 Ga0307515_10074291 Ga0307515_100742912 355
214 3300037471 Ga0395905_0017279 Ga0395905_0017279_2825_3892 355
215 3300044712 Ga0453684_0090011 Ga0453684_0090011_432_1499 355
216 3300044712 Ga0453684_0369956 Ga0453684_0369956_432_1499 355
217 3300049686 Ga0501257_006639 Ga0501257_006639_1441_2517 355
218 3300049686 Ga0501257_007370 Ga0501257_007370_815_1891 355
219 3300009093 Ga0105240_10000888 Ga0105240_100008889 356
220 3300009093 Ga0105240_10001815 Ga0105240_100018159 356
221 3300009545 Ga0105237_10288224 Ga0105237_102882242 356
222 3300010375 Ga0105239_10002137 Ga0105239_100021377 356
223 3300013296 Ga0157374_10000013 Ga0157374_10000013240 356
224 3300014969 Ga0157376_10001730 Ga0157376_100017303 356
225 3300025913 Ga0207695_10000066 Ga0207695_10000066134 356
226 3300025913 Ga0207695_10000584 Ga0207695_1000058428 356
227 3300030521 Ga0307511_10000245 Ga0307511_1000024527 356
228 3300044706 Ga0466964_0011514 Ga0466964_0011514_1119_2192 356
229 3300003316 rootH1_10107883 rootH1_101078832 357
230 3300005331 Ga0070670_100019912 Ga0070670_1000199124 357
231 3300005539 Ga0068853_100222388 Ga0068853_1002223882 357
232 3300005548 Ga0070665_100000002 Ga0070665_100000002517 357
233 3300005563 Ga0068855_100184416 Ga0068855_1001844162 357
234 3300005577 Ga0068857_100035546 Ga0068857_1000355463 357
235 3300005614 Ga0068856_100041269 Ga0068856_1000412692 357
236 3300005616 Ga0068852_100002026 Ga0068852_1000020262 357
237 3300005843 Ga0068860_100000003 Ga0068860_100000003133 357
238 3300005843 Ga0068860_100005543 Ga0068860_1000055433 357
239 3300009093 Ga0105240_10000896 Ga0105240_1000089631 357
240 3300009093 Ga0105240_10014187 Ga0105240_100141873 357
241 3300009093 Ga0105240_10015094 Ga0105240_100150946 357
242 3300009174 Ga0105241_10001109 Ga0105241_100011092 357
243 3300009545 Ga0105237_10018217 Ga0105237_100182172 357
244 3300009551 Ga0105238_10000195 Ga0105238_1000019551 357
245 3300025913 Ga0207695_10000725 Ga0207695_1000072534 357
246 3300025913 Ga0207695_10049984 Ga0207695_100499843 357
247 3300025913 Ga0207695_10276062 Ga0207695_102760622 357
248 3300025914 Ga0207671_10022661 Ga0207671_100226612 357
249 3300025924 Ga0207694_10000780 Ga0207694_1000078010 357
250 3300025925 Ga0207650_10351577 Ga0207650_103515771 357
251 3300025949 Ga0207667_10030659 Ga0207667_100306593 357
252 3300025949 Ga0207667_10146262 Ga0207667_101462622 357
253 3300026142 Ga0207698_10133393 Ga0207698_101333932 357
254 3300028379 Ga0268266_10000073 Ga0268266_1000007383 357
255 3300028381 Ga0268264_10000063 Ga0268264_1000006351 357
256 3300028786 Ga0307517_10058023 Ga0307517_100580233 357
257 3300044658 Ga0466972_0003725 Ga0466972_0003725_4521_5594 357
258 3300044901 Ga0466960_0151530 Ga0466960_0151530_81_1154 357
259 3300046460 Ga0495638_0038963 Ga0495638_0038963_1688_2761 357
260 3300046648 Ga0495611_0014611 Ga0495611_0014611_156_1229 357
261 3300053090 Ga0500646_0012606 Ga0500646_0012606_423_1496 357
262 3300053092 Ga0500583_0016095 Ga0500583_0016095_1704_2777 357
263 3300053156 Ga0500622_0000712 Ga0500622_0000712_20679_21752 357

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01063

Aminotran_4

Amino-transferase class IV

113

344

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ht5-assembly1.cif.gz_A-2 crystal structure of ilve a branched chain amino acid transaminase from mycobacterium tuberculosis 0.9576 32 357
3jz6-assembly1.cif.gz_B crystal structure of mycobacterium smegmatis branched chain aminotransferase in complex with pyridoxal-5'-phosphate at 1.9 angstrom. 0.9501 8 357
5u3f-assembly1.cif.gz_A structure of mycobacterium tuberculosis ilve, a branched-chain amino acid transaminase, in complex with d-cycloserine derivative 0.9467 35 357
5u3f-assembly1.cif.gz_B structure of mycobacterium tuberculosis ilve, a branched-chain amino acid transaminase, in complex with d-cycloserine derivative 0.9464 32 357
7nwa-assembly1.cif.gz_A crystal structure of human cytosolic branched-chain aminotransferase (bcat1) in complex with plp and compound a 0.944 5 357
ID Description Score Start End Superfamily
af_Q2G0M4_6_168_3.30.470.10 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.952 11 173 3.30.470.10
af_Q8GRH8_243_415_3.20.10.10 Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 0.946 179 352 3.20.10.10
af_I1J9H2_232_388_3.20.10.10 Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 0.9433 176 338 3.20.10.10
5u3fA01 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.9424 35 169 3.30.470.10
af_Q2G0M4_6_168_3.30.470.10 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.9407 11 173 3.30.470.10
ID Description Score Start End GO Terms
AF-A0A359MHW6-F1-model_v4 deleted 0.9915 215 320
AF-A0A6L3ZID1-F1-model_v4 branched-chain-amino-acid transaminase (EC 2.6.1.42) 0.9866 9 357 GO:0004084
GO:0009097
GO:0009098
GO:0009099
AF-A0A401XIH4-F1-model_v4 branched-chain-amino-acid transaminase (EC 2.6.1.42) 0.9855 9 357 GO:0004084
GO:0009097
GO:0009098
GO:0009099
AF-A4AVL1-F1-model_v4 Branched-chain-amino-acid aminotransferase (EC 2.6.1.42) 0.9852 77 355 GO:0009097
GO:0009098
GO:0009099
GO:0052655
GO:0052656
AF-A0A0R2TMF7-F1-model_v4 Branched-chain-amino-acid aminotransferase (EC 2.6.1.42) 0.985 9 310 GO:0009097
GO:0009098
GO:0009099
GO:0052655
GO:0052656

Feature Viewer

pLDDT pTM Quality
92.01 0.9 High
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Predicted Structure (AlphaFold2)

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