F371259

General Info

Members Datasets Scaffolds Average Seq Length
262 160 262 556

Family's Representative Sequence

Representative Sequence 3300039450|Ga0436363_1063321|Ga0436363_1063321_1356_3215
Length 612
Sequence MIRGPGRDGIGDELTRACGKPATVLITGRETLGASLGSAYSPPHPMSASSEADQIRRLLHVGRALVAEHDTEAVLDRILKEARQITGARYAALGVLDETREELERFLSLGIDSDTRRAIGDLPRGRGVLGVLIHDPRPLRLADVGEHPQSYGFPPGHPEMHTFLGVPIVVRGEGWGNLYLAEKAGGDEFTEQDEEAAVILAQWAATAIDNARLYESSERRRRQLERAVRSLEAARDIADTVSAGSELDRVLELIVKRGRALIDARSVLIMLREGDELVVAASAGHAGGARGRRLTIAGSTSGQVLKRGRPERISEASSQLRVGPEELGVPDAHSALLVPMLHRGSRLGVLAAFDKGAQQETFSAEDEQLLRTFAASASHAVALNQSVEADRLRSAIAAADAERSRWARELHDQTLQSLGGLRVALSSVLGRGDASTKDAAIRQSIEDIELEIANLRGIITDLRPSMLDDLGLVPAIEALLDRRRAAGLQVVSELNVTPELSRRGGLDPQLETTIYRVIQEALTNIVKHAHANNVYVSLTTADAEVAIVVQDDGVGFEPETRTDGFGLAGMQERVYLAGGSLEVASGETGTLVRARLPQRSDESAAPSRLAAS

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
34 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
80 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
81 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
82 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
83 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
84 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
85 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
88 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
89 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
90 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
91 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
94 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
95 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
96 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
100 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
101 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
104 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
105 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
108 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
109 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
110 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
111 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
112 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
113 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
118 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
121 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
122 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
123 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
124 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
125 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
126 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
127 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
128 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
131 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
132 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
133 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
137 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
138 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
141 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
142 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
143 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
148 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
149 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
150 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
151 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
154 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
155 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
156 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
157 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
158 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
159 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
160 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.62
Metatranscriptomes 0.38
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.76
Nodule 0
Rhizoplane 8.02
Rhizosphere 87.79
Stem 0
Stem Tuber 0
Unclassified 3.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100009381 3300005329 Bacteria 8367
2 Ga0070683_100035892 3300005329 Bacteria 4534
3 Ga0070680_100005623 3300005336 Bacteria 9494
4 Ga0070680_100010450 3300005336 Bacteria 7158
5 Ga0068868_100024415 3300005338 Bacteria 4586
6 Ga0068868_100058961 3300005338 Bacteria 3035
7 Ga0070660_100012452 3300005339 Bacteria 6073
8 Ga0070660_100018688 3300005339 Bacteria 5068
9 Ga0070692_10012460 3300005345 Bacteria 3937
10 Ga0070668_100136277 3300005347 Bacteria 1975
11 Ga0070669_100004086 3300005353 Bacteria 10569
12 Ga0070674_100061433 3300005356 Bacteria 2622
13 Ga0070659_100000031 3300005366 Bacteria 125048
14 Ga0070659_100000247 3300005366 Bacteria 42631
15 Ga0070709_10001994 3300005434 Bacteria 11110
16 Ga0070714_100000242 3300005435 Bacteria 42641
17 Ga0070714_100000565 3300005435 Bacteria 26689
18 Ga0070714_100001301 3300005435 Bacteria 18068
19 Ga0070714_100001673 3300005435 Bacteria 16126
20 Ga0070714_100022421 3300005435 Bacteria 5178
21 Ga0070713_100058490 3300005436 Bacteria 3215
22 Ga0070710_10000005 3300005437 Bacteria 238049
23 Ga0070710_10005569 3300005437 Bacteria 5997
24 Ga0070710_10008354 3300005437 Bacteria 5039
25 Ga0070711_100003420 3300005439 Bacteria 9246
26 Ga0070711_100007759 3300005439 Bacteria 6537
27 Ga0070711_100029793 3300005439 Bacteria 3606
28 Ga0070705_100009220 3300005440 Bacteria 4902
29 Ga0070700_100079780 3300005441 Bacteria 2110
30 Ga0070681_10000899 3300005458 Bacteria 25153
31 Ga0068867_100118700 3300005459 Bacteria 2041
32 Ga0068867_100137387 3300005459 Bacteria 1907
33 Ga0070679_100066030 3300005530 Bacteria 3606
34 Ga0070679_100200950 3300005530 Bacteria 1959
35 Ga0070684_100000244 3300005535 Bacteria 37629
36 Ga0070684_100095237 3300005535 Bacteria 2652
37 Ga0070665_100003919 3300005548 Bacteria 15713
38 Ga0070664_100069532 3300005564 Bacteria 3013
39 Ga0068857_100005596 3300005577 Bacteria 10735
40 Ga0068854_100018296 3300005578 Bacteria 4702
41 Ga0068856_100004625 3300005614 Bacteria 13667
42 Ga0068856_100083356 3300005614 Bacteria 3174
43 Ga0068856_100131648 3300005614 Bacteria 2506
44 Ga0070702_100059532 3300005615 Bacteria 2217
45 Ga0068864_100101357 3300005618 Bacteria 2554
46 Ga0068863_100027709 3300005841 Bacteria 5406
47 Ga0081455_10018307 3300005937 Bacteria 6678
48 Ga0081538_10001033 3300005981 Bacteria 29696
49 Ga0081538_10007239 3300005981 Bacteria 9624
50 Ga0081538_10008278 3300005981 Bacteria 8858
51 Ga0081538_10017188 3300005981 Bacteria 5502
52 Ga0081538_10021955 3300005981 Bacteria 4639
53 Ga0081539_10000260 3300005985 Bacteria 121685
54 Ga0081539_10010699 3300005985 Bacteria 7397
55 Ga0070717_10000056 3300006028 Bacteria 96306
56 Ga0070717_10061710 3300006028 Bacteria 3107
57 Ga0070717_10131793 3300006028 Bacteria 2150
58 Ga0075363_100063051 3300006048 Bacteria 2000
59 Ga0070715_10010381 3300006163 Bacteria 3317
60 Ga0070712_100000013 3300006175 Bacteria 109912
61 Ga0070712_100000286 3300006175 Bacteria 28494
62 Ga0070712_100007251 3300006175 Bacteria 6919
63 Ga0070712_100013129 3300006175 Bacteria 5284
64 Ga0075428_100062490 3300006844 Bacteria 4077
65 Ga0075431_100029711 3300006847 Bacteria 5627
66 Ga0075431_100105663 3300006847 Bacteria 2905
67 Ga0075433_10017381 3300006852 Bacteria 5956
68 Ga0075434_100030515 3300006871 Bacteria 5308
69 Ga0105240_10016470 3300009093 Bacteria 10005
70 Ga0111539_10014084 3300009094 Bacteria 9997
71 Ga0111539_10024568 3300009094 Bacteria 7392
72 Ga0111539_10118738 3300009094 Bacteria 3099
73 Ga0105245_10029014 3300009098 Bacteria 4886
74 Ga0105245_10090543 3300009098 Bacteria 2814
75 Ga0105245_10114482 3300009098 Bacteria 2512
76 Ga0114129_10261811 3300009147 Bacteria 2317
77 Ga0105243_10127460 3300009148 Bacteria 2155
78 Ga0105238_10189974 3300009551 Bacteria 2030
79 Ga0105249_10033639 3300009553 Bacteria 4642
80 Ga0105246_10055311 3300011119 Bacteria 2738
81 Ga0157369_10083136 3300013105 Bacteria 3425
82 Ga0163162_10118153 3300013306 Bacteria 2753
83 Ga0157372_10057315 3300013307 Bacteria 4354
84 Ga0163163_10042854 3300014325 Bacteria 4435
85 Ga0157377_10026016 3300014745 Bacteria 3126
86 Ga0206353_10100254 3300020082 Bacteria 7472
87 Ga0213874_10001601 3300021377 Bacteria 4743
88 Ga0207692_10000003 3300025898 Bacteria 431531
89 Ga0207692_10003875 3300025898 Bacteria 5879
90 Ga0207688_10005019 3300025901 Bacteria 7195
91 Ga0207699_10003882 3300025906 Bacteria 7138
92 Ga0207707_10011370 3300025912 Bacteria 7750
93 Ga0207707_10022125 3300025912 Bacteria 5557
94 Ga0207695_10009886 3300025913 Bacteria 11722
95 Ga0207693_10000046 3300025915 Bacteria 100888
96 Ga0207693_10000287 3300025915 Bacteria 46766
97 Ga0207693_10003863 3300025915 Bacteria 12764
98 Ga0207693_10070060 3300025915 Bacteria 2744
99 Ga0207663_10005162 3300025916 Bacteria 6569
100 Ga0207660_10006593 3300025917 Bacteria 7535
101 Ga0207657_10010207 3300025919 Bacteria 9382
102 Ga0207652_10053170 3300025921 Bacteria 3478
103 Ga0207681_10006655 3300025923 Bacteria 7097
104 Ga0207687_10013126 3300025927 Bacteria 5413
105 Ga0207700_10008066 3300025928 Bacteria 6494
106 Ga0207700_10038086 3300025928 Bacteria 3488
107 Ga0207664_10000105 3300025929 Bacteria 75519
108 Ga0207664_10002368 3300025929 Bacteria 12454
109 Ga0207664_10002617 3300025929 Bacteria 11910
110 Ga0207664_10003158 3300025929 Bacteria 10943
111 Ga0207690_10000039 3300025932 Bacteria 132999
112 Ga0207690_10000367 3300025932 Bacteria 29944
113 Ga0207690_10061407 3300025932 Bacteria 2555
114 Ga0207661_10004144 3300025944 Bacteria 10135
115 Ga0207712_10023148 3300025961 Bacteria 4097
116 Ga0207668_10128596 3300025972 Bacteria 1931
117 Ga0207708_10002648 3300026075 Bacteria 13159
118 Ga0207708_10006831 3300026075 Bacteria 8440
119 Ga0207708_10028635 3300026075 Bacteria 4218
120 Ga0207702_10041659 3300026078 Bacteria 3851
121 Ga0207641_10020372 3300026088 Bacteria 5447
122 Ga0207674_10010168 3300026116 Bacteria 10690
123 Ga0207675_100020526 3300026118 Bacteria 6158
124 Ga0207683_10063235 3300026121 Bacteria 3260
125 Ga0265326_10000182 3300028558 Bacteria 31975
126 Ga0265319_1000627 3300028563 Bacteria 23305
127 Ga0265319_1002152 3300028563 Bacteria 11021
128 Ga0265319_1002380 3300028563 Bacteria 10329
129 Ga0265334_10000050 3300028573 Bacteria 88877
130 Ga0265318_10006195 3300028577 Bacteria 5534
131 Ga0265336_10000001 3300028666 Bacteria 916179
132 Ga0265338_10000004 3300028800 Bacteria 644793
133 Ga0265338_10008406 3300028800 Bacteria 12537
134 Ga0265338_10046892 3300028800 Bacteria 3953
135 Ga0265320_10002925 3300031240 Bacteria 11699
136 Ga0265340_10000002 3300031247 Bacteria 711693
137 Ga0265339_10012630 3300031249 Bacteria 5145
138 Ga0265316_10018663 3300031344 Bacteria 5957
139 Ga0265316_10078034 3300031344 Bacteria 2543
140 Ga0265314_10026096 3300031711 Bacteria 4396
141 Ga0307407_10048375 3300031903 Bacteria 2420
142 Ga0307409_100055813 3300031995 Bacteria 3052
143 Ga0307416_100171244 3300032002 Bacteria 2021
144 Ga0307415_100006358 3300032126 Bacteria 6361
145 Ga0307415_100048747 3300032126 Bacteria 2860
146 Ga0373954_0028084 3300035118 Bacteria 2585
147 Ga0373955_0016667 3300035172 Bacteria 3621
148 Ga0373955_0019523 3300035172 Bacteria 3390
149 Ga0373933_0034197 3300035724 Bacteria 2961
150 Ga0373937_0007215 3300036401 Bacteria 9617
151 Ga0373937_0064527 3300036401 Bacteria 3368
152 Ga0395898_0149087 3300037466 Bacteria 2239
153 Ga0395905_0097606 3300037471 Bacteria 2759
154 Ga0436364_0803909 3300037853 Bacteria 4257
155 Ga0436364_0925198 3300037853 Bacteria 13448
156 Ga0436364_0978647 3300037853 Bacteria 2543
157 Ga0395901_0026229 3300038443 Bacteria 5982
158 Ga0436365_0254126 3300039437 Bacteria 67152
159 Ga0436365_0706146 3300039437 Bacteria 4878
160 Ga0436363_0901179 3300039450 Bacteria 7160
161 Ga0436363_1063321 3300039450 Bacteria 4173
162 Ga0436362_0568535 3300039453 Bacteria 3846
163 Ga0436362_1001694 3300039453 Bacteria 3231
164 Ga0466969_0007343 3300044656 Bacteria 5858
165 Ga0466959_0035094 3300045049 Bacteria 3710
166 Ga0466959_0045789 3300045049 Bacteria 3221
167 Ga0466959_0051112 3300045049 Unclassified 3033
168 Ga0466958_0005416 3300045836 Bacteria 6865
169 Ga0466958_0047941 3300045836 Bacteria 2580
170 Ga0466958_0050445 3300045836 Bacteria 2519
171 Ga0466958_0081874 3300045836 Bacteria 1987
172 Ga0466967_0004291 3300045976 Bacteria 9589
173 Ga0466967_0101554 3300045976 Bacteria 2629
174 Ga0495641_0042021 3300046461 Bacteria 2121
175 Ga0495651_0001874 3300046462 Bacteria 16265
176 Ga0495651_0007178 3300046462 Bacteria 8518
177 Ga0495653_0006895 3300046463 Bacteria 9338
178 Ga0495653_0018369 3300046463 Bacteria 5680
179 Ga0495653_0021894 3300046463 Bacteria 5175
180 Ga0495608_0001046 3300046511 Bacteria 19481
181 Ga0495608_0002367 3300046511 Bacteria 13567
182 Ga0495608_0016512 3300046511 Bacteria 5108
183 Ga0495618_0000137 3300046514 Bacteria 52421
184 Ga0495618_0003085 3300046514 Bacteria 10509
185 Ga0495628_0003396 3300046516 Bacteria 14253
186 Ga0495628_0019291 3300046516 Bacteria 5640
187 Ga0495630_0000280 3300046517 Bacteria 41276
188 Ga0495652_0012409 3300046529 Bacteria 7685
189 Ga0495640_0016797 3300046533 Bacteria 5471
190 Ga0495587_0007942 3300046536 Bacteria 6854
191 Ga0495587_0025535 3300046536 Bacteria 3610
192 Ga0495645_0000022 3300046543 Bacteria 137019
193 Ga0495645_0000407 3300046543 Bacteria 29620
194 Ga0495667_0000244 3300046559 Bacteria 35420
195 Ga0495667_0006516 3300046559 Bacteria 7926
196 Ga0495667_0056945 3300046559 Bacteria 2570
197 Ga0495634_0019223 3300046642 Bacteria 4856
198 Ga0495635_0001965 3300046663 Bacteria 13979
199 Ga0495657_0000041 3300046675 Bacteria 115251
200 Ga0495657_0031967 3300046675 Bacteria 3675
201 Ga0495623_0003966 3300046679 Bacteria 9743
202 Ga0495646_0025847 3300046680 Bacteria 3690
203 Ga0495613_0000023 3300046689 Bacteria 153699
204 Ga0495613_0028207 3300046689 Bacteria 4176
205 Ga0495613_0064223 3300046689 Bacteria 2685
206 Ga0495600_0003851 3300046809 Bacteria 8899
207 Ga0495600_0019913 3300046809 Bacteria 4289
208 Ga0495604_0002225 3300047317 Bacteria 15533
209 Ga0495604_0042385 3300047317 Bacteria 3567
210 Ga0495674_0017059 3300047319 Bacteria 6764
211 Ga0495674_0022195 3300047319 Bacteria 5855
212 Ga0495674_0088232 3300047319 Bacteria 2653
213 Ga0495680_0005632 3300047322 Bacteria 11736
214 Ga0495680_0009477 3300047322 Bacteria 8751
215 Ga0495675_0028553 3300047444 Bacteria 3556
216 Ga0495675_0048300 3300047444 Bacteria 2707
217 Ga0495684_0014007 3300047471 Bacteria 6168
218 Ga0495684_0045739 3300047471 Bacteria 3349
219 Ga0495684_0057663 3300047471 Bacteria 2959
220 Ga0495602_0008117 3300048088 Bacteria 10966
221 Ga0495602_0022560 3300048088 Bacteria 6158
222 Ga0496104_0010746 3300048907 Bacteria 8187
223 Ga0496104_0053086 3300048907 Bacteria 3829
224 Ga0496104_0188539 3300048907 Bacteria 1973
225 Ga0496105_0018385 3300048908 Bacteria 5616
226 Ga0496108_0010448 3300048911 Bacteria 7540
227 Ga0496108_0030107 3300048911 Bacteria 4499
228 Ga0496109_0000252 3300048912 Bacteria 51599
229 Ga0496109_0048098 3300048912 Bacteria 3880
230 Ga0496109_0094241 3300048912 Bacteria 2771
231 Ga0496111_0026484 3300048914 Bacteria 4096
232 Ga0496112_0000160 3300048915 Bacteria 42530
233 Ga0496112_0007350 3300048915 Bacteria 9772
234 Ga0496112_0007975 3300048915 Bacteria 9444
235 Ga0496112_0049455 3300048915 Bacteria 4122
236 Ga0496112_0058167 3300048915 Bacteria 3807
237 Ga0496112_0068891 3300048915 Bacteria 3495
238 Ga0496113_0009230 3300048916 Bacteria 6470
239 Ga0496113_0107268 3300048916 Bacteria 2170
240 Ga0496113_0121158 3300048916 Bacteria 2045
241 Ga0496115_0018936 3300048918 Bacteria 5296
242 Ga0496115_0081058 3300048918 Bacteria 2643
243 Ga0496124_0054264 3300048927 Bacteria 3393
244 Ga0501031_0093768 3300049568 Bacteria 1959
245 Ga0501039_0083077 3300049575 Bacteria 2494
246 Ga0501042_0017028 3300049578 Bacteria 5005
247 Ga0501048_0015992 3300049582 Bacteria 5534
248 Ga0501071_0043194 3300049587 Bacteria 3231
249 Ga0501072_0041492 3300049588 Bacteria 3614
250 Ga0501076_0040739 3300049592 Bacteria 3651
251 Ga0501081_0101328 3300049743 Bacteria 2036
252 nmdc:mga03n38_52045_c1 3300050490 Bacteria 1831
253 nmdc:mga08y16_18047_c1 3300050511 Bacteria 7432
254 nmdc:mga08y16_48892_c1 3300050511 Bacteria 4426
255 nmdc:mga0n895_66593_c1 3300050512 Bacteria 3567
256 nmdc:mga0a205_124135_c1 3300050515 Bacteria 2482
257 Ga0495601_0000155 3300053077 Bacteria 38513
258 Ga0495612_0000117 3300053078 Bacteria 33431
259 Ga0495595_0002696 3300053084 Bacteria 6967
260 Ga0495619_0016476 3300053085 Bacteria 4679
261 Ga0501084_0027653 3300054114 Bacteria 4740
262 Ga0530510_0001262 3300061734 Bacteria 16886

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005459 Ga0068867_100137387 Ga0068867_1001373871 487
2 3300025972 Ga0207668_10128596 Ga0207668_101285961 487
3 3300009094 Ga0111539_10024568 Ga0111539_100245685 488
4 3300050511 nmdc:mga08y16_18047_c1 nmdc:mga08y16_18047_c1_403_2073 488
5 3300025932 Ga0207690_10061407 Ga0207690_100614071 492
6 3300026121 Ga0207683_10063235 Ga0207683_100632353 492
7 3300006048 Ga0075363_100063051 Ga0075363_1000630511 493
8 3300050490 nmdc:mga03n38_52045_c1 nmdc:mga03n38_52045_c1_43_1701 493
9 3300005347 Ga0070668_100136277 Ga0070668_1001362771 504
10 3300009147 Ga0114129_10261811 Ga0114129_102618111 504
11 3300032126 Ga0307415_100048747 Ga0307415_1000487472 504
12 3300028563 Ga0265319_1002380 Ga0265319_10023803 510
13 3300031240 Ga0265320_10002925 Ga0265320_1000292510 510
14 3300006175 Ga0070712_100000013 Ga0070712_10000001316 511
15 3300025915 Ga0207693_10000046 Ga0207693_1000004689 511
16 3300026075 Ga0207708_10006831 Ga0207708_100068317 512
17 3300005435 Ga0070714_100001301 Ga0070714_1000013019 516
18 3300025929 Ga0207664_10002368 Ga0207664_100023689 516
19 3300048915 Ga0496112_0007350 Ga0496112_0007350_5252_6946 518
20 3300006028 Ga0070717_10000056 Ga0070717_1000005665 519
21 3300031903 Ga0307407_10048375 Ga0307407_100483752 519
22 3300005985 Ga0081539_10010699 Ga0081539_100106994 520
23 3300047444 Ga0495675_0048300 Ga0495675_0048300_214_1884 521
24 3300049578 Ga0501042_0017028 Ga0501042_0017028_89_1729 521
25 3300049743 Ga0501081_0101328 Ga0501081_0101328_56_1696 521
26 3300005366 Ga0070659_100000247 Ga0070659_1000002478 522
27 3300005615 Ga0070702_100059532 Ga0070702_1000595321 522
28 3300025932 Ga0207690_10000039 Ga0207690_1000003946 522
29 3300048912 Ga0496109_0048098 Ga0496109_0048098_524_2191 522
30 3300048914 Ga0496111_0026484 Ga0496111_0026484_1249_2916 522
31 3300048915 Ga0496112_0049455 Ga0496112_0049455_1543_3210 522
32 3300049568 Ga0501031_0093768 Ga0501031_0093768_29_1672 522
33 3300005339 Ga0070660_100012452 Ga0070660_1000124522 524
34 3300005366 Ga0070659_100000031 Ga0070659_10000003125 524
35 3300025932 Ga0207690_10000367 Ga0207690_100003677 524
36 3300005435 Ga0070714_100000242 Ga0070714_10000024221 527
37 3300005841 Ga0068863_100027709 Ga0068863_1000277095 527
38 3300025928 Ga0207700_10008066 Ga0207700_100080662 527
39 3300025929 Ga0207664_10000105 Ga0207664_1000010524 527
40 3300026088 Ga0207641_10020372 Ga0207641_100203722 527
41 3300045049 Ga0466959_0051112 Ga0466959_0051112_488_2194 527
42 3300045836 Ga0466958_0005416 Ga0466958_0005416_5046_6752 527
43 3300045976 Ga0466967_0004291 Ga0466967_0004291_569_2275 527
44 3300006844 Ga0075428_100062490 Ga0075428_1000624902 529
45 3300006847 Ga0075431_100029711 Ga0075431_1000297113 529
46 3300028577 Ga0265318_10006195 Ga0265318_100061953 529
47 3300028800 Ga0265338_10046892 Ga0265338_100468922 529
48 3300031344 Ga0265316_10078034 Ga0265316_100780342 529
49 3300031711 Ga0265314_10026096 Ga0265314_100260962 529
50 3300053078 Ga0495612_0000117 Ga0495612_0000117_1271_3022 529
51 3300005981 Ga0081538_10007239 Ga0081538_100072396 531
52 3300006028 Ga0070717_10061710 Ga0070717_100617103 531
53 3300049575 Ga0501039_0083077 Ga0501039_0083077_667_2322 531
54 3300049587 Ga0501071_0043194 Ga0501071_0043194_1162_2817 531
55 3300049588 Ga0501072_0041492 Ga0501072_0041492_752_2407 531
56 3300049592 Ga0501076_0040739 Ga0501076_0040739_1207_2862 531
57 3300054114 Ga0501084_0027653 Ga0501084_0027653_1965_3620 531
58 3300061734 Ga0530510_0001262 Ga0530510_0001262_9613_11268 531
59 3300047471 Ga0495684_0014007 Ga0495684_0014007_2394_4091 532
60 3300005440 Ga0070705_100009220 Ga0070705_1000092202 533
61 3300037471 Ga0395905_0097606 Ga0395905_0097606_604_2271 534
62 3300038443 Ga0395901_0026229 Ga0395901_0026229_608_2275 534
63 3300031995 Ga0307409_100055813 Ga0307409_1000558132 536
64 3300032002 Ga0307416_100171244 Ga0307416_1001712442 536
65 3300053077 Ga0495601_0000155 Ga0495601_0000155_8047_9738 537
66 3300037853 Ga0436364_0803909 Ga0436364_0803909_595_2316 538
67 3300046689 Ga0495613_0000023 Ga0495613_0000023_126755_128446 538
68 3300005338 Ga0068868_100024415 Ga0068868_1000244153 539
69 3300009098 Ga0105245_10090543 Ga0105245_100905432 539
70 3300009148 Ga0105243_10127460 Ga0105243_101274602 539
71 3300009551 Ga0105238_10189974 Ga0105238_101899741 539
72 3300009553 Ga0105249_10033639 Ga0105249_100336394 539
73 3300013306 Ga0163162_10118153 Ga0163162_101181532 539
74 3300025961 Ga0207712_10023148 Ga0207712_100231483 539
75 3300026118 Ga0207675_100020526 Ga0207675_1000205265 539
76 3300005345 Ga0070692_10012460 Ga0070692_100124604 540
77 3300025912 Ga0207707_10022125 Ga0207707_100221253 540
78 3300032126 Ga0307415_100006358 Ga0307415_1000063586 541
79 3300046559 Ga0495667_0056945 Ga0495667_0056945_804_2516 542
80 3300047319 Ga0495674_0088232 Ga0495674_0088232_209_1921 542
81 3300005436 Ga0070713_100058490 Ga0070713_1000584902 543
82 3300005564 Ga0070664_100069532 Ga0070664_1000695322 543
83 3300048912 Ga0496109_0094241 Ga0496109_0094241_226_1947 543
84 3300048915 Ga0496112_0007975 Ga0496112_0007975_3168_4889 543
85 3300048916 Ga0496113_0009230 Ga0496113_0009230_3224_4945 543
86 3300044656 Ga0466969_0007343 Ga0466969_0007343_2807_4483 544
87 3300045049 Ga0466959_0035094 Ga0466959_0035094_52_1728 544
88 3300045836 Ga0466958_0081874 Ga0466958_0081874_151_1827 544
89 3300005981 Ga0081538_10008278 Ga0081538_100082784 545
90 3300005981 Ga0081538_10017188 Ga0081538_100171883 545
91 3300045836 Ga0466958_0050445 Ga0466958_0050445_552_2246 545
92 3300005336 Ga0070680_100005623 Ga0070680_1000056233 546
93 3300005353 Ga0070669_100004086 Ga0070669_1000040869 546
94 3300005937 Ga0081455_10018307 Ga0081455_100183076 546
95 3300009093 Ga0105240_10016470 Ga0105240_100164702 546
96 3300025923 Ga0207681_10006655 Ga0207681_100066555 546
97 3300005985 Ga0081539_10000260 Ga0081539_10000260125 548
98 3300028558 Ga0265326_10000182 Ga0265326_1000018234 548
99 3300028563 Ga0265319_1002152 Ga0265319_100215210 548
100 3300028573 Ga0265334_10000050 Ga0265334_100000506 548
101 3300028800 Ga0265338_10008406 Ga0265338_1000840611 548
102 3300046511 Ga0495608_0002367 Ga0495608_0002367_8253_9941 548
103 3300049582 Ga0501048_0015992 Ga0501048_0015992_2599_4254 548
104 3300005437 Ga0070710_10000005 Ga0070710_1000000546 550
105 3300005981 Ga0081538_10021955 Ga0081538_100219552 550
106 3300025898 Ga0207692_10000003 Ga0207692_10000003318 550
107 3300048927 Ga0496124_0054264 Ga0496124_0054264_963_2621 550
108 3300005614 Ga0068856_100131648 Ga0068856_1001316482 551
109 3300006847 Ga0075431_100105663 Ga0075431_1001056632 551
110 3300045049 Ga0466959_0045789 Ga0466959_0045789_333_2009 551
111 3300046461 Ga0495641_0042021 Ga0495641_0042021_97_1764 551
112 3300048915 Ga0496112_0068891 Ga0496112_0068891_733_2400 551
113 3300048916 Ga0496113_0107268 Ga0496113_0107268_58_1725 551
114 3300005435 Ga0070714_100000565 Ga0070714_1000005655 552
115 3300006028 Ga0070717_10131793 Ga0070717_101317932 552
116 3300006175 Ga0070712_100013129 Ga0070712_1000131293 552
117 3300025929 Ga0207664_10002617 Ga0207664_100026175 552
118 3300045976 Ga0466967_0101554 Ga0466967_0101554_141_1838 553
119 3300048911 Ga0496108_0010448 Ga0496108_0010448_4763_6463 554
120 3300048912 Ga0496109_0000252 Ga0496109_0000252_36683_38383 554
121 3300009098 Ga0105245_10114482 Ga0105245_101144822 555
122 3300036401 Ga0373937_0007215 Ga0373937_0007215_1874_3571 555
123 3300037853 Ga0436364_0978647 Ga0436364_0978647_284_2008 555
124 3300046462 Ga0495651_0007178 Ga0495651_0007178_4420_6117 555
125 3300046463 Ga0495653_0006895 Ga0495653_0006895_2418_4115 555
126 3300046511 Ga0495608_0001046 Ga0495608_0001046_17686_19383 555
127 3300046514 Ga0495618_0003085 Ga0495618_0003085_2427_4124 555
128 3300046516 Ga0495628_0003396 Ga0495628_0003396_6396_8093 555
129 3300046529 Ga0495652_0012409 Ga0495652_0012409_3633_5330 555
130 3300046536 Ga0495587_0007942 Ga0495587_0007942_1689_3386 555
131 3300046559 Ga0495667_0000244 Ga0495667_0000244_31087_32784 555
132 3300046679 Ga0495623_0003966 Ga0495623_0003966_1559_3256 555
133 3300046689 Ga0495613_0028207 Ga0495613_0028207_2440_4137 555
134 3300046809 Ga0495600_0003851 Ga0495600_0003851_2028_3725 555
135 3300047317 Ga0495604_0002225 Ga0495604_0002225_11300_12997 555
136 3300047319 Ga0495674_0022195 Ga0495674_0022195_2511_4208 555
137 3300047322 Ga0495680_0005632 Ga0495680_0005632_7203_8900 555
138 3300048088 Ga0495602_0008117 Ga0495602_0008117_6765_8462 555
139 3300053084 Ga0495595_0002696 Ga0495595_0002696_4813_6510 555
140 3300053085 Ga0495619_0016476 Ga0495619_0016476_2399_4096 555
141 3300039437 Ga0436365_0254126 Ga0436365_0254126_4657_6351 558
142 3300045836 Ga0466958_0047941 Ga0466958_0047941_120_1808 558
143 3300046543 Ga0495645_0000022 Ga0495645_0000022_132165_133850 558
144 3300046514 Ga0495618_0000137 Ga0495618_0000137_22463_24172 560
145 3300046543 Ga0495645_0000407 Ga0495645_0000407_24353_26047 560
146 3300035172 Ga0373955_0016667 Ga0373955_0016667_458_2155 561
147 3300035724 Ga0373933_0034197 Ga0373933_0034197_759_2456 561
148 3300039437 Ga0436365_0706146 Ga0436365_0706146_1573_3270 561
149 3300039453 Ga0436362_1001694 Ga0436362_1001694_221_1921 561
150 3300046642 Ga0495634_0019223 Ga0495634_0019223_2376_4073 561
151 3300021377 Ga0213874_10001601 Ga0213874_100016012 563
152 3300039450 Ga0436363_0901179 Ga0436363_0901179_2177_3880 563
153 3300005441 Ga0070700_100079780 Ga0070700_1000797801 564
154 3300005614 Ga0068856_100004625 Ga0068856_1000046259 564
155 3300009094 Ga0111539_10118738 Ga0111539_101187383 564
156 3300026075 Ga0207708_10028635 Ga0207708_100286352 564
157 3300026078 Ga0207702_10041659 Ga0207702_100416594 564
158 3300005548 Ga0070665_100003919 Ga0070665_10000391915 565
159 3300037853 Ga0436364_0925198 Ga0436364_0925198_10292_12001 565
160 3300039453 Ga0436362_0568535 Ga0436362_0568535_342_2051 565
161 3300005329 Ga0070683_100035892 Ga0070683_1000358925 566
162 3300005336 Ga0070680_100010450 Ga0070680_1000104503 566
163 3300005338 Ga0068868_100058961 Ga0068868_1000589612 566
164 3300005339 Ga0070660_100018688 Ga0070660_1000186885 566
165 3300005434 Ga0070709_10001994 Ga0070709_100019948 566
166 3300005435 Ga0070714_100001673 Ga0070714_10000167316 566
167 3300005437 Ga0070710_10008354 Ga0070710_100083543 566
168 3300005458 Ga0070681_10000899 Ga0070681_1000089921 566
169 3300005459 Ga0068867_100118700 Ga0068867_1001187002 566
170 3300005530 Ga0070679_100066030 Ga0070679_1000660302 566
171 3300005535 Ga0070684_100095237 Ga0070684_1000952373 566
172 3300005614 Ga0068856_100083356 Ga0068856_1000833563 566
173 3300005618 Ga0068864_100101357 Ga0068864_1001013573 566
174 3300006175 Ga0070712_100000286 Ga0070712_10000028627 566
175 3300013307 Ga0157372_10057315 Ga0157372_100573154 566
176 3300014325 Ga0163163_10042854 Ga0163163_100428542 566
177 3300014745 Ga0157377_10026016 Ga0157377_100260163 566
178 3300020082 Ga0206353_10100254 Ga0206353_101002543 566
179 3300025898 Ga0207692_10003875 Ga0207692_100038753 566
180 3300025901 Ga0207688_10005019 Ga0207688_100050193 566
181 3300025906 Ga0207699_10003882 Ga0207699_100038823 566
182 3300025912 Ga0207707_10011370 Ga0207707_100113707 566
183 3300025915 Ga0207693_10000287 Ga0207693_100002873 566
184 3300025917 Ga0207660_10006593 Ga0207660_100065936 566
185 3300025919 Ga0207657_10010207 Ga0207657_100102074 566
186 3300025928 Ga0207700_10038086 Ga0207700_100380862 566
187 3300025929 Ga0207664_10003158 Ga0207664_1000315810 566
188 3300025944 Ga0207661_10004144 Ga0207661_100041445 566
189 3300026075 Ga0207708_10002648 Ga0207708_100026485 566
190 3300035118 Ga0373954_0028084 Ga0373954_0028084_732_2441 566
191 3300035172 Ga0373955_0019523 Ga0373955_0019523_497_2206 566
192 3300036401 Ga0373937_0064527 Ga0373937_0064527_1622_3331 566
193 3300046462 Ga0495651_0001874 Ga0495651_0001874_11649_13358 566
194 3300046463 Ga0495653_0021894 Ga0495653_0021894_1600_3309 566
195 3300046511 Ga0495608_0016512 Ga0495608_0016512_2452_4161 566
196 3300046516 Ga0495628_0019291 Ga0495628_0019291_2357_4066 566
197 3300046533 Ga0495640_0016797 Ga0495640_0016797_2483_4192 566
198 3300046536 Ga0495587_0025535 Ga0495587_0025535_156_1865 566
199 3300046559 Ga0495667_0006516 Ga0495667_0006516_3241_4950 566
200 3300046663 Ga0495635_0001965 Ga0495635_0001965_1745_3454 566
201 3300046675 Ga0495657_0031967 Ga0495657_0031967_962_2671 566
202 3300046680 Ga0495646_0025847 Ga0495646_0025847_1497_3206 566
203 3300046689 Ga0495613_0064223 Ga0495613_0064223_27_1736 566
204 3300046809 Ga0495600_0019913 Ga0495600_0019913_1665_3374 566
205 3300047317 Ga0495604_0042385 Ga0495604_0042385_972_2681 566
206 3300047319 Ga0495674_0017059 Ga0495674_0017059_3642_5351 566
207 3300047322 Ga0495680_0009477 Ga0495680_0009477_6444_8153 566
208 3300047444 Ga0495675_0028553 Ga0495675_0028553_422_2131 566
209 3300047471 Ga0495684_0057663 Ga0495684_0057663_1043_2752 566
210 3300048088 Ga0495602_0022560 Ga0495602_0022560_3480_5189 566
211 3300048907 Ga0496104_0053086 Ga0496104_0053086_1907_3619 566
212 3300048915 Ga0496112_0058167 Ga0496112_0058167_1311_3038 566
213 3300048916 Ga0496113_0121158 Ga0496113_0121158_209_1936 566
214 3300048918 Ga0496115_0081058 Ga0496115_0081058_466_2178 566
215 3300048907 Ga0496104_0010746 Ga0496104_0010746_2527_4239 567
216 3300048908 Ga0496105_0018385 Ga0496105_0018385_2683_4395 567
217 3300048915 Ga0496112_0000160 Ga0496112_0000160_22830_24542 567
218 3300005435 Ga0070714_100022421 Ga0070714_1000224214 568
219 3300005439 Ga0070711_100007759 Ga0070711_1000077593 568
220 3300006175 Ga0070712_100007251 Ga0070712_1000072513 568
221 3300025915 Ga0207693_10003863 Ga0207693_100038633 568
222 3300025915 Ga0207693_10070060 Ga0207693_100700601 568
223 3300025916 Ga0207663_10005162 Ga0207663_100051625 568
224 3300005530 Ga0070679_100200950 Ga0070679_1002009502 569
225 3300005578 Ga0068854_100018296 Ga0068854_1000182963 569
226 3300013105 Ga0157369_10083136 Ga0157369_100831362 569
227 3300025913 Ga0207695_10009886 Ga0207695_100098866 569
228 3300025921 Ga0207652_10053170 Ga0207652_100531703 569
229 3300005437 Ga0070710_10005569 Ga0070710_100055693 570
230 3300005439 Ga0070711_100003420 Ga0070711_1000034203 570
231 3300005439 Ga0070711_100029793 Ga0070711_1000297933 570
232 3300006163 Ga0070715_10010381 Ga0070715_100103812 571
233 3300048907 Ga0496104_0188539 Ga0496104_0188539_68_1828 571
234 3300048911 Ga0496108_0030107 Ga0496108_0030107_301_2061 571
235 3300048918 Ga0496115_0018936 Ga0496115_0018936_1196_2956 571
236 3300006852 Ga0075433_10017381 Ga0075433_100173816 572
237 3300006871 Ga0075434_100030515 Ga0075434_1000305153 572
238 3300009094 Ga0111539_10014084 Ga0111539_100140843 572
239 3300037466 Ga0395898_0149087 Ga0395898_0149087_31_1776 572
240 3300050511 nmdc:mga08y16_48892_c1 nmdc:mga08y16_48892_c1_249_1994 572
241 3300050512 nmdc:mga0n895_66593_c1 nmdc:mga0n895_66593_c1_49_1794 572
242 3300050515 nmdc:mga0a205_124135_c1 nmdc:mga0a205_124135_c1_611_2356 572
243 3300028563 Ga0265319_1000627 Ga0265319_10006273 574
244 3300028666 Ga0265336_10000001 Ga0265336_10000001759 574
245 3300028800 Ga0265338_10000004 Ga0265338_10000004124 574
246 3300031247 Ga0265340_10000002 Ga0265340_10000002124 574
247 3300031249 Ga0265339_10012630 Ga0265339_100126302 574
248 3300031344 Ga0265316_10018663 Ga0265316_100186633 574
249 3300039450 Ga0436363_1063321 Ga0436363_1063321_1356_3215 574
250 3300005981 Ga0081538_10001033 Ga0081538_1000103319 575
251 3300046463 Ga0495653_0018369 Ga0495653_0018369_2443_4194 576
252 3300046517 Ga0495630_0000280 Ga0495630_0000280_1584_3332 576
253 3300046675 Ga0495657_0000041 Ga0495657_0000041_50618_52366 576
254 3300047471 Ga0495684_0045739 Ga0495684_0045739_1454_3202 576
255 3300005356 Ga0070674_100061433 Ga0070674_1000614332 592
256 3300009098 Ga0105245_10029014 Ga0105245_100290142 592
257 3300025927 Ga0207687_10013126 Ga0207687_100131263 592
258 3300005329 Ga0070683_100009381 Ga0070683_1000093814 595
259 3300005535 Ga0070684_100000244 Ga0070684_10000024421 595
260 3300005577 Ga0068857_100005596 Ga0068857_1000055964 595
261 3300011119 Ga0105246_10055311 Ga0105246_100553112 595
262 3300026116 Ga0207674_10010168 Ga0207674_100101688 595

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

509

600

0.92

PF07730

HisKA_3

Histidine kinase

402

467

0.91

PF13185

GAF_2

GAF domain

68

209

0.87

PF13581

HATPase_c_2

Histidine kinase-like ATPase domain

487

595

0.87

PF01590

GAF

GAF domain

70

208

0.81

PF13492

GAF_3

GAF domain

246

383

0.81

PF13185

GAF_2

GAF domain

244

382

0.8

PF01590

GAF

GAF domain

246

381

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
2vzw-assembly1.cif.gz_A x-ray structure of the heme-bound gaf domain of sensory histidine kinase dost of mycobacterium tuberculosis 0.914 37 178
2w3h-assembly1.cif.gz_B cyanide bound structure of the first gaf domain of mycobacterium tuberculosis doss 0.9138 36 177
4ynr-assembly1.cif.gz_A doss gafa domain reduced co bound crystal structure 0.907 34 175
4yof-assembly1.cif.gz_A doss gafa domain reduced nitric oxide bound crystal structure 0.9056 34 175
2y79-assembly1.cif.gz_B structure of the first gaf domain e87a mutant of mycobacterium tuberculosis doss 0.9045 36 180
ID Description Score Start End Superfamily
af_P0AFA2_454_587_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9155 433 564 3.30.565.10
af_P09835_373_498_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.91 435 564 3.30.565.10
4ynrA00 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;GAF domain 0.907 34 175 3.30.450.40
af_Q2FVM6_212_344_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.8974 429 564 3.30.565.10
4ynrA00 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;GAF domain 0.8948 34 175 3.30.450.40
ID Description Score Start End GO Terms
AF-A0A7C5BFD4-F1-model_v4 GAF domain-containing protein 0.898 19 191 GO:0016020
AF-A0A7X7CNQ8-F1-model_v4 deleted 0.8793 435 568
AF-A0A2A6RKK5-F1-model_v4 Histidine kinase/HSP90-like ATPase domain-containing protein 0.8791 435 565 GO:0000160
GO:0016020
GO:0016301
AF-A0A3N6AEF3-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8696 450 566 GO:0000160
GO:0005886
GO:0016301
AF-A0A3M2EN23-F1-model_v4 GAF domain-containing protein 0.8634 19 195

Feature Viewer

pLDDT pTM Quality
83.07 0.58 Medium
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Predicted Structure (AlphaFold2)

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