F371058

General Info

Members Datasets Scaffolds Average Seq Length
262 152 252 439

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10089615|Ga0105237_100896153
Length 475
Sequence VQINKNYKINFLFFLRTMNATYSHPMKKNKYLVFFISIALTLTLHSTTWSQTVADSVNGPVSLKQCVEFALRNQPAVRQASIDEQINEKDIRIGLSAWLPQITGSGIYNYYFKGTPQAGASGANFPASSGIRNLSTLGLQASQVIYNNDVLLAAKTAKYSRQYYKQNTLSSQINVVSDVSKAFFDVLLSQKQLNITNEDITRLQRSLKDAYNRYQAGVSDKTDYKQATISLNNSLATRKQTEEAIKSKTAYLKQIMGIDGAKNLSLAYDSSRYEQAAVIDTNQQLDVNNRIEYRLLQTSKVLQNVNVNYYRYGFLPSLSAVGSYNRAYFSHDFSDLYNQAYPTGYAGLTLSLPIFQGTKRLQNLSKAKLQVERTDLDLENSKNTINTEYVQALASYKSNYTSYQLIRQNVDLAKDVYKVVSLQYREGVKTYLDVIVSQSDLRTAELNYYNALFQLLSSKIDLQKALGTLGVDTNQ

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2738541278 Niastella sp. CF465 Isolate Unclassified
3 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
4 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
5 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
6 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
7 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
8 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
9 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
10 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
11 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
12 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
13 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
14 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
15 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
16 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
17 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
18 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
19 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
20 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
21 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
22 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
23 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
26 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
27 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
28 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
29 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
30 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
31 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
32 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
33 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
34 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
35 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
36 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
37 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
70 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
71 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
72 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
73 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
97 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
98 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
99 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
100 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
101 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
102 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
103 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
104 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
105 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
106 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
111 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
112 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
115 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
116 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
117 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
118 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
119 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
120 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
123 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
124 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
125 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
126 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
127 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
128 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
129 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
130 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
131 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
134 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
135 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
136 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
137 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
138 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
139 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
145 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
146 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
147 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
148 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
149 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
150 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
151 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
152 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.8
Metatranscriptomes 0
Isolates 4.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.54
Nodule 0
Rhizoplane 0.76
Rhizosphere 78.24
Stem 0
Stem Tuber 0
Unclassified 11.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10002518 3300001989 Bacteria 7066
2 JGI24737J22298_10003011 3300001990 Bacteria 5976
3 JGI24735J21928_10000004 3300002067 Bacteria 381713
4 JGI25162J39368_1000017 3300002737 Bacteria 281385
5 JGI25162J39368_1005975 3300002737 Bacteria 2220
6 JGI25157J39369_1003262 3300002741 Bacteria 3400
7 JGI25164J39214_1001961 3300002772 Bacteria 3739
8 JGI25165J46597_1001336 3300003214 Bacteria 13864
9 rootH1_10034907 3300003316 Bacteria 17542
10 rootH1_10070837 3300003316 Bacteria 8513
11 rootH2_10001334 3300003320 Bacteria 238709
12 rootH2_10082609 3300003320 Bacteria 3123
13 rootH2_10164646 3300003320 Bacteria 3150
14 rootH2_10236767 3300003320 Bacteria 3008
15 rootL2_10031721 3300003322 Bacteria 8554
16 rootH1_10001790 3300003323 Bacteria 63047
17 rootH1_10007801 3300003323 Bacteria 12464
18 rootH1_10014342 3300003316 Bacteria 4530
19 rootH1_10014342 3300003323 Bacteria 2961
20 rootH1_10025279 3300003323 Bacteria 3039
21 rootH1_10117380 3300003323 Bacteria 5920
22 rootH1_10132684 3300003323 Bacteria 7338
23 Ga0065714_10010639 3300005288 Bacteria 4576
24 Ga0070658_10000019 3300005327 Bacteria 194742
25 Ga0070658_10088686 3300005327 Bacteria 2547
26 Ga0070676_10000038 3300005328 Bacteria 39143
27 Ga0070680_100003410 3300005336 Bacteria 11861
28 Ga0068868_100024530 3300005338 Bacteria 4578
29 Ga0070660_100016662 3300005339 Bacteria 5341
30 Ga0070660_100021349 3300005339 Bacteria 4774
31 Ga0070671_100006585 3300005355 Bacteria 9284
32 Ga0070674_100013627 3300005356 Bacteria 5032
33 Ga0070673_100150151 3300005364 Bacteria 1973
34 Ga0070673_100221219 3300005364 Bacteria 1639
35 Ga0070659_100000042 3300005366 Bacteria 103672
36 Ga0070659_100006728 3300005366 Bacteria 8311
37 Ga0070663_100003783 3300005455 Bacteria 8795
38 Ga0070678_100019055 3300005456 Bacteria 4462
39 Ga0070662_100000464 3300005457 Bacteria 24077
40 Ga0070662_100139088 3300005457 Bacteria 1880
41 Ga0070681_10025622 3300005458 Bacteria 5933
42 Ga0068867_100000255 3300005459 Bacteria 35036
43 Ga0070679_100009258 3300005530 Bacteria 9309
44 Ga0068853_100008773 3300005539 Bacteria 8133
45 Ga0068853_100024930 3300005539 Bacteria 5018
46 Ga0068853_100124642 3300005539 Bacteria 2301
47 Ga0070665_100000003 3300005548 Bacteria 811857
48 Ga0068855_100000073 3300005563 Bacteria 121126
49 Ga0068855_100000086 3300005563 Bacteria 111462
50 Ga0068855_100002323 3300005563 Bacteria 23507
51 Ga0068855_100036955 3300005563 Bacteria 5811
52 Ga0068855_100112759 3300005563 Bacteria 3120
53 Ga0068855_100135331 3300005563 Bacteria 2812
54 Ga0068857_100010030 3300005577 Bacteria 8227
55 Ga0068856_100006750 3300005614 Bacteria 11239
56 Ga0068856_100013934 3300005614 Bacteria 7775
57 Ga0068856_100126402 3300005614 Bacteria 2560
58 Ga0068856_100167777 3300005614 Bacteria 2206
59 Ga0068852_100001089 3300005616 Bacteria 17919
60 Ga0068858_100143190 3300005842 Bacteria 2245
61 Ga0068862_100261110 3300005844 Bacteria 1581
62 Ga0075366_10019827 3300006195 Bacteria 3897
63 Ga0075366_10040093 3300006195 Bacteria 2769
64 Ga0097621_100000241 3300006237 Bacteria 36577
65 Ga0068871_100000499 3300006358 Bacteria 26769
66 Ga0068865_100000022 3300006881 Bacteria 102976
67 Ga0105240_10000010 3300009093 Bacteria 537830
68 Ga0105240_10030461 3300009093 Bacteria 7013
69 Ga0105240_10039369 3300009093 Bacteria 6055
70 Ga0105240_10040669 3300009093 Bacteria 5942
71 Ga0105240_10173809 3300009093 Bacteria 2548
72 Ga0105241_10152196 3300009174 Bacteria 1893
73 Ga0105242_10004533 3300009176 Bacteria 10782
74 Ga0105237_10000065 3300009545 Bacteria 139423
75 Ga0105237_10001288 3300009545 Bacteria 33371
76 Ga0105237_10001855 3300009545 Bacteria 27072
77 Ga0105237_10003021 3300009545 Bacteria 20301
78 Ga0105237_10036096 3300009545 Bacteria 5000
79 Ga0105237_10089615 3300009545 Bacteria 3065
80 Ga0105237_10111489 3300009545 Bacteria 2728
81 Ga0105239_10000005 3300010375 Bacteria 496066
82 Ga0105239_10000042 3300010375 Bacteria 199662
83 Ga0105239_10001380 3300010375 Bacteria 32568
84 Ga0105239_10008882 3300010375 Bacteria 11375
85 Ga0105239_10017483 3300010375 Bacteria 7930
86 Ga0105239_10019439 3300010375 Bacteria 7499
87 Ga0105239_10084183 3300010375 Bacteria 3503
88 Ga0105239_10266837 3300010375 Bacteria 1925
89 Ga0105239_10357301 3300010375 Unclassified 1649
90 Ga0105246_10037492 3300011119 Bacteria 3254
91 Ga0157373_10000223 3300013100 Bacteria 46516
92 Ga0157373_10000661 3300013100 Bacteria 27028
93 Ga0157371_10000622 3300013102 Bacteria 42231
94 Ga0157371_10001433 3300013102 Bacteria 24766
95 Ga0157371_10027339 3300013102 Bacteria 4138
96 Ga0157371_10171222 3300013102 Bacteria 1552
97 Ga0157370_10082948 3300013104 Bacteria 3014
98 Ga0157369_10000165 3300013105 Bacteria 93924
99 Ga0157369_10031182 3300013105 Bacteria 5874
100 Ga0157374_10000130 3300013296 Bacteria 68718
101 Ga0157374_10001204 3300013296 Bacteria 22127
102 Ga0157374_10003721 3300013296 Bacteria 12819
103 Ga0157378_10019464 3300013297 Bacteria 5967
104 Ga0157378_10020127 3300013297 Bacteria 5868
105 Ga0163162_10000064 3300013306 Bacteria 103542
106 Ga0163162_10008652 3300013306 Bacteria 9909
107 Ga0163162_10014886 3300013306 Bacteria 7596
108 Ga0163162_10270640 3300013306 Bacteria 1830
109 Ga0157372_10000021 3300013307 Bacteria 207801
110 Ga0157372_10001064 3300013307 Bacteria 30014
111 Ga0157372_10001219 3300013307 Bacteria 27839
112 Ga0157372_10005160 3300013307 Bacteria 13886
113 Ga0157375_10016311 3300013308 Bacteria 6668
114 Ga0157377_10019528 3300014745 Bacteria 3542
115 Ga0213876_10002331 3300021384 Bacteria 11200
116 Ga0209563_105018 3300025230 Bacteria 2452
117 Ga0209437_100024 3300025233 Bacteria 592878
118 Ga0209437_100052 3300025233 Bacteria 380548
119 Ga0209646_1002027 3300025246 Bacteria 4831
120 Ga0209026_1000305 3300025250 Bacteria 53618
121 Ga0209026_1002294 3300025250 Bacteria 7307
122 Ga0209233_1000067 3300025261 Bacteria 380554
123 Ga0209233_1002165 3300025261 Bacteria 7364
124 Ga0209455_1010212 3300025272 Bacteria 2402
125 Ga0207647_10000093 3300025904 Bacteria 68094
126 Ga0207645_10000585 3300025907 Bacteria 30250
127 Ga0207705_10000069 3300025909 Bacteria 133094
128 Ga0207654_10003730 3300025911 Bacteria 7689
129 Ga0207654_10030075 3300025911 Bacteria 2978
130 Ga0207707_10032457 3300025912 Bacteria 4571
131 Ga0207695_10000019 3300025913 Bacteria 732137
132 Ga0207695_10018059 3300025913 Bacteria 8166
133 Ga0207695_10043564 3300025913 Bacteria 4782
134 Ga0207671_10000657 3300025914 Bacteria 45082
135 Ga0207671_10001714 3300025914 Bacteria 24751
136 Ga0207671_10003844 3300025914 Bacteria 14692
137 Ga0207671_10020410 3300025914 Bacteria 5043
138 Ga0207671_10059253 3300025914 Bacteria 2839
139 Ga0207671_10080998 3300025914 Bacteria 2434
140 Ga0207671_10248907 3300025914 Bacteria 1397
141 Ga0207660_10005319 3300025917 Bacteria 8367
142 Ga0207657_10025229 3300025919 Bacteria 5485
143 Ga0207657_10073983 3300025919 Bacteria 2878
144 Ga0207652_10024661 3300025921 Bacteria 4991
145 Ga0207690_10000694 3300025932 Bacteria 21669
146 Ga0207690_10012852 3300025932 Bacteria 5016
147 Ga0207706_10000243 3300025933 Bacteria 59842
148 Ga0207706_10173675 3300025933 Bacteria 1893
149 Ga0207686_10067113 3300025934 Bacteria 2294
150 Ga0207704_10000011 3300025938 Bacteria 180140
151 Ga0207667_10000009 3300025949 Bacteria 603135
152 Ga0207667_10000229 3300025949 Bacteria 78821
153 Ga0207667_10001471 3300025949 Bacteria 29532
154 Ga0207667_10059914 3300025949 Bacteria 3985
155 Ga0207667_10067386 3300025949 Bacteria 3729
156 Ga0207667_10069829 3300025949 Bacteria 3657
157 Ga0207639_10093274 3300026041 Bacteria 2414
158 Ga0207702_10001233 3300026078 Bacteria 25870
159 Ga0207702_10014236 3300026078 Bacteria 6604
160 Ga0207702_10254350 3300026078 Bacteria 1651
161 Ga0207648_10001014 3300026089 Bacteria 31612
162 Ga0207683_10027113 3300026121 Bacteria 4951
163 Ga0207698_10001995 3300026142 Bacteria 12019
164 Ga0207698_10223774 3300026142 Bacteria 1702
165 Ga0268266_10000078 3300028379 Bacteria 213632
166 Ga0268265_10216926 3300028380 Bacteria 1671
167 Ga0265323_10003461 3300028653 Bacteria 6969
168 Ga0307517_10047611 3300028786 Bacteria 4437
169 Ga0307515_10001331 3300028794 Bacteria 55969
170 Ga0307515_10002940 3300028794 Bacteria 36133
171 Ga0265327_10001505 3300031251 Bacteria 28874
172 Ga0265316_10001577 3300031344 Bacteria 24379
173 Ga0265316_10003911 3300031344 Bacteria 14931
174 Ga0265316_10067227 3300031344 Bacteria 2772
175 Ga0307509_10132240 3300031507 Bacteria 2448
176 Ga0307412_10059872 3300031911 Bacteria 2554
177 Ga0307415_100078802 3300032126 Bacteria 2345
178 Ga0307507_10000034 3300033179 Bacteria 188697
179 Ga0307510_10001439 3300033180 Bacteria 26186
180 Ga0395899_0000121 3300037312 Bacteria 125324
181 Ga0395899_0000461 3300037312 Bacteria 46076
182 Ga0395899_0000883 3300037312 Bacteria 28485
183 Ga0395900_0000014 3300037418 Bacteria 386513
184 Ga0395900_0000358 3300037418 Bacteria 66350
185 Ga0395900_0008366 3300037418 Bacteria 10647
186 Ga0395898_0020052 3300037466 Bacteria 6796
187 Ga0395905_0000037 3300037471 Bacteria 261808
188 Ga0395905_0005047 3300037471 Bacteria 13596
189 Ga0395901_0000117 3300038443 Bacteria 105071
190 Ga0395901_0086068 3300038443 Bacteria 3286
191 Ga0436365_0517581 3300039437 Bacteria 19902
192 Ga0439448_0012528 3300042005 Bacteria 2538
193 Ga0451577_0058823 3300042876 Bacteria 3427
194 Ga0466969_0000445 3300044656 Bacteria 22630
195 Ga0466972_0000270 3300044658 Bacteria 32742
196 Ga0466966_0000144 3300044684 Bacteria 45151
197 Ga0453684_0005719 3300044712 Bacteria 24337
198 Ga0453684_0012684 3300044712 Bacteria 13840
199 Ga0453684_0246008 3300044712 Bacteria 2056
200 Ga0466968_0009046 3300044735 Bacteria 3830
201 Ga0466968_0051318 3300044735 Bacteria 1762
202 Ga0466957_0001227 3300044842 Bacteria 13383
203 Ga0466957_0023111 3300044842 Bacteria 3672
204 Ga0466959_0000045 3300045049 Bacteria 89773
205 Ga0451576_0262663 3300045051 Bacteria 1805
206 Ga0495651_0201785 3300046462 Bacteria 1391
207 Ga0495650_0000087 3300046471 Bacteria 234870
208 Ga0495585_0000448 3300046492 Bacteria 39402
209 Ga0495606_0000052 3300046507 Bacteria 201529
210 Ga0495606_0005602 3300046507 Bacteria 11940
211 Ga0495606_0070993 3300046507 Bacteria 2194
212 Ga0495610_0014007 3300046512 Bacteria 4736
213 Ga0495616_0002645 3300046513 Bacteria 11774
214 Ga0495631_0003418 3300046518 Bacteria 8690
215 Ga0495648_0007677 3300046524 Bacteria 8599
216 Ga0495633_0000177 3300046558 Bacteria 82953
217 Ga0495668_0000207 3300046616 Bacteria 85136
218 Ga0495625_0000008 3300046660 Bacteria 536165
219 Ga0495625_0001343 3300046660 Bacteria 30471
220 Ga0495625_0026668 3300046660 Bacteria 4362
221 Ga0495625_0036086 3300046660 Bacteria 3637
222 Ga0495661_0018036 3300046665 Bacteria 4648
223 Ga0495661_0030241 3300046665 Bacteria 3450
224 Ga0495658_0021503 3300046683 Bacteria 3402
225 Ga0495649_0000018 3300046694 Bacteria 220586
226 Ga0495660_0004194 3300046810 Bacteria 8759
227 Ga0495660_0075470 3300046810 Bacteria 1779
228 Ga0495687_001584 3300047443 Bacteria 20599
229 Ga0495687_001870 3300047443 Bacteria 18236
230 Ga0495686_0000052 3300047472 Bacteria 262622
231 Ga0495686_0007429 3300047472 Bacteria 8221
232 Ga0495686_0031797 3300047472 Bacteria 3419
233 Ga0495686_0109129 3300047472 Bacteria 1661
234 Ga0496115_0002833 3300048918 Bacteria 12472
235 Ga0501047_0043490 3300049581 Bacteria 4339
236 Ga0501073_0111788 3300049589 Bacteria 1895
237 Ga0501035_0112471 3300049822 Bacteria 2386
238 Ga0501044_0005156 3300049823 Bacteria 14565
239 Ga0501044_0101899 3300049823 Bacteria 2888
240 nmdc:mga0k408_157_c1 3300050493 Bacteria 35085
241 nmdc:mga0k408_256_c1 3300050493 Bacteria 9838
242 nmdc:mga07m45_80968_c2 3300050496 Bacteria 1528
243 Ga0500578_0000184 3300053086 Bacteria 75675
244 Ga0500578_0009847 3300053086 Bacteria 6207
245 Ga0500583_0004699 3300053092 Bacteria 4487
246 Ga0500608_001355 3300053122 Bacteria 8761
247 Ga0500618_000124 3300053125 Bacteria 63455
248 Ga0500618_020196 3300053125 Bacteria 1633
249 Ga0500622_0000991 3300053156 Bacteria 23992
250 Ga0500622_0093911 3300053156 Bacteria 1485
251 Ga0500624_000445 3300053157 Bacteria 12451
252 Ga0500636_0034790 3300053177 Bacteria 2982

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025914 Ga0207671_10248907 Ga0207671_102489071 352
2 3300049822 Ga0501035_0112471 Ga0501035_0112471_1264_2355 352
3 3300044735 Ga0466968_0051318 Ga0466968_0051318_199_1485 392
4 3300045049 Ga0466959_0000045 Ga0466959_0000045_87733_89019 394
5 3300053156 Ga0500622_0093911 Ga0500622_0093911_191_1414 396
6 3300003323 rootH1_10001790 rootH1_1000179028 398
7 3300013102 Ga0157371_10171222 Ga0157371_101712221 399
8 3300037418 Ga0395900_0008366 Ga0395900_0008366_626_2029 399
9 3300037471 Ga0395905_0005047 Ga0395905_0005047_5567_6970 399
10 3300038443 Ga0395901_0086068 Ga0395901_0086068_76_1479 399
11 3300047472 Ga0495686_0007429 Ga0495686_0007429_6766_8094 399
12 3300013306 Ga0163162_10270640 Ga0163162_102706401 401
13 3300025914 Ga0207671_10080998 Ga0207671_100809982 402
14 3300026142 Ga0207698_10223774 Ga0207698_102237741 402
15 3300006195 Ga0075366_10040093 Ga0075366_100400933 404
16 3300033179 Ga0307507_10000034 Ga0307507_10000034168 404
17 3300046524 Ga0495648_0007677 Ga0495648_0007677_132_1478 404
18 3300046616 Ga0495668_0000207 Ga0495668_0000207_70672_72018 404
19 3300046660 Ga0495625_0001343 Ga0495625_0001343_479_1825 404
20 3300046660 Ga0495625_0026668 Ga0495625_0026668_658_2004 404
21 3300046683 Ga0495658_0021503 Ga0495658_0021503_92_1438 404
22 3300046810 Ga0495660_0075470 Ga0495660_0075470_342_1688 404
23 3300050493 nmdc:mga0k408_157_c1 nmdc:mga0k408_157_c1_2569_3915 404
24 3300025250 Ga0209026_1002294 Ga0209026_10022945 405
25 3300028794 Ga0307515_10002940 Ga0307515_1000294035 405
26 3300044656 Ga0466969_0000445 Ga0466969_0000445_13695_15032 405
27 3300044684 Ga0466966_0000144 Ga0466966_0000144_27659_28996 405
28 3300046558 Ga0495633_0000177 Ga0495633_0000177_20287_21633 405
29 3300044712 Ga0453684_0012684 Ga0453684_0012684_12214_13584 406
30 3300053125 Ga0500618_020196 Ga0500618_020196_118_1452 407
31 3300005844 Ga0068862_100261110 Ga0068862_1002611102 408
32 3300028380 Ga0268265_10216926 Ga0268265_102169262 408
33 3300001990 JGI24737J22298_10003011 JGI24737J22298_100030111 409
34 3300005366 Ga0070659_100006728 Ga0070659_1000067283 409
35 3300013100 Ga0157373_10000661 Ga0157373_1000066121 409
36 3300013102 Ga0157371_10000622 Ga0157371_1000062232 409
37 3300013104 Ga0157370_10082948 Ga0157370_100829482 409
38 3300013307 Ga0157372_10001219 Ga0157372_1000121915 409
39 3300025261 Ga0209233_1002165 Ga0209233_10021653 409
40 3300025932 Ga0207690_10012852 Ga0207690_100128523 409
41 3300005327 Ga0070658_10000019 Ga0070658_1000001949 410
42 3300005563 Ga0068855_100135331 Ga0068855_1001353312 410
43 3300025909 Ga0207705_10000069 Ga0207705_1000006949 410
44 3300025949 Ga0207667_10069829 Ga0207667_100698292 410
45 3300044842 Ga0466957_0001227 Ga0466957_0001227_5058_6347 410
46 3300044842 Ga0466957_0023111 Ga0466957_0023111_1895_3184 410
47 3300053086 Ga0500578_0009847 Ga0500578_0009847_627_1916 410
48 3300053177 Ga0500636_0034790 Ga0500636_0034790_202_1491 410
49 3300031911 Ga0307412_10059872 Ga0307412_100598722 411
50 3300053092 Ga0500583_0004699 Ga0500583_0004699_2610_3950 411
51 iso_pu_bacteria 2839989709 2839991329 411
52 3300028794 Ga0307515_10001331 Ga0307515_1000133131 412
53 3300044658 Ga0466972_0000270 Ga0466972_0000270_25046_26389 412
54 3300049589 Ga0501073_0111788 Ga0501073_0111788_464_1777 412
55 3300021384 Ga0213876_10002331 Ga0213876_100023315 413
56 3300039437 Ga0436365_0517581 Ga0436365_0517581_5893_7212 413
57 3300048918 Ga0496115_0002833 Ga0496115_0002833_5584_6885 413
58 3300005842 Ga0068858_100143190 Ga0068858_1001431902 414
59 3300006195 Ga0075366_10019827 Ga0075366_100198272 414
60 3300009174 Ga0105241_10152196 Ga0105241_101521961 414
61 3300003316 rootH1_10034907 rootH1_100349073 415
62 3300005563 Ga0068855_100000086 Ga0068855_10000008688 415
63 3300025949 Ga0207667_10000229 Ga0207667_1000022962 415
64 3300046665 Ga0495661_0030241 Ga0495661_0030241_1915_3252 415
65 3300009093 Ga0105240_10039369 Ga0105240_100393693 416
66 3300013297 Ga0157378_10019464 Ga0157378_100194643 416
67 iso_pu_bacteria 2910245624 2910249933 416
68 3300002737 JGI25162J39368_1005975 JGI25162J39368_10059751 417
69 3300002772 JGI25164J39214_1001961 JGI25164J39214_10019613 417
70 3300003214 JGI25165J46597_1001336 JGI25165J46597_10013363 417
71 3300003323 rootH1_10007801 rootH1_1000780110 417
72 3300003323 rootH1_10025279 rootH1_100252793 417
73 3300025233 Ga0209437_100052 Ga0209437_10005250 417
74 3300025261 Ga0209233_1000067 Ga0209233_100006750 417
75 iso_pu_bacteria 2738541278 2738726881 417
76 3300003320 rootH2_10001334 rootH2_10001334169 418
77 3300005563 Ga0068855_100000073 Ga0068855_10000007343 418
78 3300009545 Ga0105237_10001855 Ga0105237_1000185521 418
79 3300010375 Ga0105239_10000042 Ga0105239_10000042129 418
80 3300025914 Ga0207671_10001714 Ga0207671_1000171412 418
81 3300025949 Ga0207667_10000009 Ga0207667_10000009184 418
82 3300042876 Ga0451577_0058823 Ga0451577_0058823_1623_3005 418
83 3300044712 Ga0453684_0005719 Ga0453684_0005719_12263_13645 418
84 3300045051 Ga0451576_0262663 Ga0451576_0262663_205_1587 418
85 3300047472 Ga0495686_0000052 Ga0495686_0000052_151732_153090 418
86 3300047472 Ga0495686_0109129 Ga0495686_0109129_131_1489 418
87 3300002741 JGI25157J39369_1003262 JGI25157J39369_10032622 419
88 3300003320 rootH2_10164646 rootH2_101646463 419
89 3300013100 Ga0157373_10000223 Ga0157373_100002237 419
90 3300013102 Ga0157371_10001433 Ga0157371_100014334 419
91 3300013105 Ga0157369_10000165 Ga0157369_1000016517 419
92 3300013307 Ga0157372_10000021 Ga0157372_1000002137 419
93 3300013307 Ga0157372_10005160 Ga0157372_100051606 419
94 3300025250 Ga0209026_1000305 Ga0209026_100030547 419
95 3300037312 Ga0395899_0000461 Ga0395899_0000461_35045_36508 419
96 3300028653 Ga0265323_10003461 Ga0265323_100034613 420
97 3300031344 Ga0265316_10001577 Ga0265316_1000157716 420
98 3300003322 rootL2_10031721 rootL2_100317211 421
99 3300005455 Ga0070663_100003783 Ga0070663_1000037832 421
100 3300005563 Ga0068855_100002323 Ga0068855_10000232313 421
101 3300005577 Ga0068857_100010030 Ga0068857_1000100309 421
102 3300005614 Ga0068856_100167777 Ga0068856_1001677772 421
103 3300010375 Ga0105239_10001380 Ga0105239_1000138014 421
104 3300025949 Ga0207667_10001471 Ga0207667_1000147110 421
105 3300032126 Ga0307415_100078802 Ga0307415_1000788022 421
106 3300044735 Ga0466968_0009046 Ga0466968_0009046_154_1491 421
107 3300049581 Ga0501047_0043490 Ga0501047_0043490_28_1365 421
108 3300049823 Ga0501044_0005156 Ga0501044_0005156_967_2304 421
109 3300049823 Ga0501044_0101899 Ga0501044_0101899_1216_2556 421
110 3300053086 Ga0500578_0000184 Ga0500578_0000184_12014_13354 421
111 3300003320 rootH2_10082609 rootH2_100826091 422
112 3300005355 Ga0070671_100006585 Ga0070671_1000065853 422
113 3300005364 Ga0070673_100221219 Ga0070673_1002212191 422
114 3300005457 Ga0070662_100139088 Ga0070662_1001390881 422
115 3300009093 Ga0105240_10000010 Ga0105240_10000010449 422
116 3300009545 Ga0105237_10000065 Ga0105237_1000006594 422
117 3300010375 Ga0105239_10008882 Ga0105239_100088829 422
118 3300010375 Ga0105239_10017483 Ga0105239_100174835 422
119 3300013308 Ga0157375_10016311 Ga0157375_100163112 422
120 3300025246 Ga0209646_1002027 Ga0209646_10020273 422
121 3300025911 Ga0207654_10030075 Ga0207654_100300752 422
122 3300025913 Ga0207695_10000019 Ga0207695_100000197 422
123 3300025914 Ga0207671_10000657 Ga0207671_1000065722 422
124 3300025933 Ga0207706_10173675 Ga0207706_101736751 422
125 3300047443 Ga0495687_001870 Ga0495687_001870_16262_17596 422
126 3300050496 nmdc:mga07m45_80968_c2 nmdc:mga07m45_80968_c2_148_1482 422
127 3300005288 Ga0065714_10010639 Ga0065714_100106393 423
128 3300005327 Ga0070658_10088686 Ga0070658_100886862 423
129 3300005339 Ga0070660_100021349 Ga0070660_1000213494 423
130 3300005366 Ga0070659_100000042 Ga0070659_10000004211 423
131 3300025919 Ga0207657_10073983 Ga0207657_100739832 423
132 3300025932 Ga0207690_10000694 Ga0207690_100006943 423
133 3300031251 Ga0265327_10001505 Ga0265327_1000150511 423
134 3300005336 Ga0070680_100003410 Ga0070680_1000034108 424
135 3300005458 Ga0070681_10025622 Ga0070681_100256224 424
136 3300005530 Ga0070679_100009258 Ga0070679_1000092585 424
137 3300025912 Ga0207707_10032457 Ga0207707_100324572 424
138 3300025917 Ga0207660_10005319 Ga0207660_100053195 424
139 3300025921 Ga0207652_10024661 Ga0207652_100246613 424
140 3300031344 Ga0265316_10067227 Ga0265316_100672272 424
141 3300005614 Ga0068856_100126402 Ga0068856_1001264022 425
142 3300009093 Ga0105240_10040669 Ga0105240_100406693 425
143 3300010375 Ga0105239_10000005 Ga0105239_10000005197 425
144 3300013306 Ga0163162_10008652 Ga0163162_100086524 425
145 3300025913 Ga0207695_10018059 Ga0207695_100180593 425
146 3300026078 Ga0207702_10254350 Ga0207702_102543501 425
147 iso_pu_bacteria 2852623160 2852623367 425
148 iso_pu_bacteria 2884933994 2884937756 425
149 3300005614 Ga0068856_100006750 Ga0068856_1000067505 426
150 3300025272 Ga0209455_1010212 Ga0209455_10102122 426
151 3300026078 Ga0207702_10014236 Ga0207702_100142364 426
152 3300031344 Ga0265316_10003911 Ga0265316_100039113 426
153 3300044712 Ga0453684_0246008 Ga0453684_0246008_30_1412 426
154 3300050493 nmdc:mga0k408_256_c1 nmdc:mga0k408_256_c1_6248_7576 426
155 3300053156 Ga0500622_0000991 Ga0500622_0000991_11584_12909 426
156 iso_pu_bacteria 2919437846 2919438922 427
157 iso_pu_bacteria 2977232053 2977236149 427
158 3300003323 rootH1_10014342 rootH1_100143421 428
159 3300003323 rootH1_10117380 rootH1_101173802 428
160 3300005339 Ga0070660_100016662 Ga0070660_1000166621 428
161 3300005356 Ga0070674_100013627 Ga0070674_1000136274 428
162 3300005539 Ga0068853_100124642 Ga0068853_1001246421 428
163 3300009093 Ga0105240_10173809 Ga0105240_101738093 428
164 3300010375 Ga0105239_10019439 Ga0105239_100194396 428
165 3300025230 Ga0209563_105018 Ga0209563_1050181 428
166 3300025919 Ga0207657_10025229 Ga0207657_100252293 428
167 3300031507 Ga0307509_10132240 Ga0307509_101322402 428
168 3300037312 Ga0395899_0000121 Ga0395899_0000121_103145_104479 428
169 3300046462 Ga0495651_0201785 Ga0495651_0201785_32_1381 428
170 3300005457 Ga0070662_100000464 Ga0070662_10000046419 429
171 3300005539 Ga0068853_100024930 Ga0068853_1000249303 429
172 3300005548 Ga0070665_100000003 Ga0070665_100000003313 429
173 3300005563 Ga0068855_100036955 Ga0068855_1000369552 429
174 3300009093 Ga0105240_10030461 Ga0105240_100304613 429
175 3300010375 Ga0105239_10357301 Ga0105239_103573011 429
176 3300011119 Ga0105246_10037492 Ga0105246_100374922 429
177 3300013296 Ga0157374_10000130 Ga0157374_1000013014 429
178 3300013306 Ga0163162_10000064 Ga0163162_1000006439 429
179 3300014745 Ga0157377_10019528 Ga0157377_100195282 429
180 3300025904 Ga0207647_10000093 Ga0207647_1000009342 429
181 3300025911 Ga0207654_10003730 Ga0207654_100037306 429
182 3300025913 Ga0207695_10043564 Ga0207695_100435642 429
183 3300025933 Ga0207706_10000243 Ga0207706_1000024338 429
184 3300025949 Ga0207667_10067386 Ga0207667_100673862 429
185 3300026041 Ga0207639_10093274 Ga0207639_100932742 429
186 3300026078 Ga0207702_10001233 Ga0207702_1000123321 429
187 3300028379 Ga0268266_10000078 Ga0268266_10000078103 429
188 3300005328 Ga0070676_10000038 Ga0070676_1000003811 430
189 3300005338 Ga0068868_100024530 Ga0068868_1000245302 430
190 3300005364 Ga0070673_100150151 Ga0070673_1001501511 430
191 3300005456 Ga0070678_100019055 Ga0070678_1000190553 430
192 3300005459 Ga0068867_100000255 Ga0068867_10000025515 430
193 3300005539 Ga0068853_100008773 Ga0068853_1000087735 430
194 3300005616 Ga0068852_100001089 Ga0068852_10000108914 430
195 3300006237 Ga0097621_100000241 Ga0097621_1000002413 430
196 3300006358 Ga0068871_100000499 Ga0068871_10000049914 430
197 3300006881 Ga0068865_100000022 Ga0068865_1000000222 430
198 3300009176 Ga0105242_10004533 Ga0105242_1000453310 430
199 3300009545 Ga0105237_10001288 Ga0105237_100012885 430
200 3300009545 Ga0105237_10003021 Ga0105237_100030215 430
201 3300013296 Ga0157374_10001204 Ga0157374_1000120419 430
202 3300013296 Ga0157374_10003721 Ga0157374_100037213 430
203 3300013297 Ga0157378_10020127 Ga0157378_100201273 430
204 3300025907 Ga0207645_10000585 Ga0207645_1000058517 430
205 3300025914 Ga0207671_10003844 Ga0207671_1000384414 430
206 3300025934 Ga0207686_10067113 Ga0207686_100671132 430
207 3300025938 Ga0207704_10000011 Ga0207704_100000113 430
208 3300026089 Ga0207648_10001014 Ga0207648_1000101416 430
209 3300026121 Ga0207683_10027113 Ga0207683_100271133 430
210 3300026142 Ga0207698_10001995 Ga0207698_1000199511 430
211 3300028786 Ga0307517_10047611 Ga0307517_100476111 430
212 3300033180 Ga0307510_10001439 Ga0307510_1000143919 430
213 3300037312 Ga0395899_0000883 Ga0395899_0000883_1075_2406 430
214 3300037418 Ga0395900_0000014 Ga0395900_0000014_159575_160906 430
215 3300037418 Ga0395900_0000358 Ga0395900_0000358_51732_53066 430
216 3300037466 Ga0395898_0020052 Ga0395898_0020052_5128_6459 430
217 3300037471 Ga0395905_0000037 Ga0395905_0000037_159565_160896 430
218 3300038443 Ga0395901_0000117 Ga0395901_0000117_73222_74553 430
219 3300042005 Ga0439448_0012528 Ga0439448_0012528_28_1359 430
220 3300046518 Ga0495631_0003418 Ga0495631_0003418_1313_2644 430
221 3300053122 Ga0500608_001355 Ga0500608_001355_4135_5466 430
222 iso_pu_bacteria 2599185184 2599478221 430
223 iso_pu_bacteria 2928078545 2928080729 430
224 iso_pu_bacteria 2928147474 2928150954 430
225 iso_pu_bacteria 2932082852 2932082889 430
226 3300046492 Ga0495585_0000448 Ga0495585_0000448_7246_8598 431
227 3300046513 Ga0495616_0002645 Ga0495616_0002645_5210_6556 431
228 3300046660 Ga0495625_0036086 Ga0495625_0036086_1279_2625 431
229 3300053157 Ga0500624_000445 Ga0500624_000445_5258_6622 431
230 3300003316 rootH1_10070837 rootH1_100708374 432
231 3300009545 Ga0105237_10111489 Ga0105237_101114892 432
232 3300053125 Ga0500618_000124 Ga0500618_000124_51306_52658 432
233 3300002737 JGI25162J39368_1000017 JGI25162J39368_1000017120 433
234 3300005563 Ga0068855_100112759 Ga0068855_1001127593 433
235 3300005614 Ga0068856_100013934 Ga0068856_1000139344 433
236 3300009545 Ga0105237_10036096 Ga0105237_100360964 433
237 3300009545 Ga0105237_10089615 Ga0105237_100896153 433
238 3300010375 Ga0105239_10266837 Ga0105239_102668371 433
239 3300025233 Ga0209437_100024 Ga0209437_100024194 433
240 3300025914 Ga0207671_10020410 Ga0207671_100204103 433
241 3300025914 Ga0207671_10059253 Ga0207671_100592532 433
242 3300025949 Ga0207667_10059914 Ga0207667_100599143 433
243 3300001989 JGI24739J22299_10002518 JGI24739J22299_100025182 434
244 3300002067 JGI24735J21928_10000004 JGI24735J21928_10000004216 434
245 3300003320 rootH2_10236767 rootH2_102367673 434
246 3300003323 rootH1_10132684 rootH1_101326845 434
247 3300010375 Ga0105239_10084183 Ga0105239_100841832 434
248 3300013102 Ga0157371_10027339 Ga0157371_100273392 434
249 3300013105 Ga0157369_10031182 Ga0157369_100311822 434
250 3300013306 Ga0163162_10014886 Ga0163162_100148866 434
251 3300013307 Ga0157372_10001064 Ga0157372_1000106410 434
252 3300046471 Ga0495650_0000087 Ga0495650_0000087_133069_134421 434
253 3300046507 Ga0495606_0000052 Ga0495606_0000052_60439_61791 434
254 3300046507 Ga0495606_0005602 Ga0495606_0005602_3440_4798 434
255 3300046507 Ga0495606_0070993 Ga0495606_0070993_708_2060 434
256 3300046512 Ga0495610_0014007 Ga0495610_0014007_3141_4493 434
257 3300046660 Ga0495625_0000008 Ga0495625_0000008_425787_427139 434
258 3300046665 Ga0495661_0018036 Ga0495661_0018036_2157_3509 434
259 3300046694 Ga0495649_0000018 Ga0495649_0000018_109027_110379 434
260 3300046810 Ga0495660_0004194 Ga0495660_0004194_3410_4768 434
261 3300047443 Ga0495687_001584 Ga0495687_001584_17960_19312 434
262 3300047472 Ga0495686_0031797 Ga0495686_0031797_33_1385 434

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02321

OEP

Outer membrane efflux protein

63

257

0.99

PF02321

OEP

Outer membrane efflux protein

279

467

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5azs-assembly1.cif.gz_B crystal structure of a membrane protein from pseudomonas aeruginosa 0.7748 22 426
4k7r-assembly1.cif.gz_A crystal structures of cusc review conformational changes accompanying folding and transmembrane channel formation 0.7726 22 426
6wxh-assembly1.cif.gz_B colicin e1 fragment in nanodisc-embedded tolc 0.7718 21 431
7ng9-assembly1.cif.gz_A trimeric efflux pump klebsiella tolc 0.7653 22 431
2vdd-assembly1.cif.gz_B crystal structure of the open state of tolc outer membrane component of mutlidrug efflux pumps 0.7641 21 431
ID Description Score Start End Superfamily
1vf7G03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9571 358 411 1.10.287.470
2f1mD03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9562 351 422 1.10.287.470
2f1mD03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9194 351 422 1.10.287.470
1vf7G03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.8523 358 411 1.10.287.470
2f1mB03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.8485 351 422 1.10.287.470
ID Description Score Start End GO Terms
AF-A0A7X7FAZ1-F1-model_v4 TolC family protein 0.8666 18 429 GO:0009279
GO:0015288
GO:0015562
GO:1990281
AF-A0A2N2IN41-F1-model_v4 TolC family protein 0.8654 18 428 GO:0009279
GO:0015288
GO:0015562
GO:1990281
AF-A0A2A8CTE3-F1-model_v4 Transporter 0.8593 5 426 GO:0009279
GO:0015288
GO:0015562
GO:1990281
AF-A0A2T2UK37-F1-model_v4 TolC family protein 0.8588 131 426 GO:0009279
GO:0015288
GO:0015562
GO:1990281
AF-A0A7Z6VH60-F1-model_v4 deleted 0.8507 253 433

Feature Viewer

pLDDT pTM Quality
81.51 0.67 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map