F370672

General Info

Members Datasets Scaffolds Average Seq Length
261 136 261 311

Family's Representative Sequence

Representative Sequence 3300049742|Ga0501080_0160242|Ga0501080_0160242_148_1245
Length 365
Sequence MQISFAVVFIVPTSGDFIYPDVVQTLVEDFLQYLRHERGQSDNTAKTYAALLGKFVAWAEKQNLSDWKSVELKHLMLFLQSERTRHLLPVGRASSRTVNDLRQGDDGSRGRSLHQDKSTRRLSGESVYLEIAALRAFYKFAENEKFLPVNVAENLSLPRRWKRLPKALSNDEIERLLKVEEPAMATPENLRDQAILEVAYASGLRLSELRNLRLEQLHLDAGFINVIGKGNKERVVPVGRKAVAALNRYLENGRHKLVTPKSPANVFITGTEKRKRGTPFASVTLWKRIKKRVERAGIERNITPHMLRHSFATHLLERGADLRVIQELLGHATIGTTEIYTHVTGNRLREIHRKFHPRTELPKKT

Samples

Sample ID Description Type Environment
1 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
54 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
56 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
57 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
58 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
59 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
60 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
61 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
62 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
63 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
64 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
65 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
66 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
69 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
77 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
78 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
79 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
80 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
81 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
82 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
83 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
84 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
85 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
86 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
87 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
88 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
89 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
90 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
91 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
94 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
101 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
102 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
103 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
104 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
105 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
106 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
107 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
108 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
109 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
110 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
111 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
112 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
113 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
114 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
115 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
116 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
122 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
123 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
124 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
135 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
136 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.38
Nodule 0
Rhizoplane 0.38
Rhizosphere 98.85
Stem 0
Stem Tuber 0
Unclassified 0.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNXas_1000440 3300000545 Bacteria 2919
2 rootH1_10343203 3300003323 Bacteria 2164
3 Ga0070658_10214126 3300005327 Bacteria 1628
4 Ga0070690_100130898 3300005330 Bacteria 1694
5 Ga0070666_10036151 3300005335 Bacteria 3276
6 Ga0070689_100014305 3300005340 Bacteria 5761
7 Ga0070689_100066246 3300005340 Bacteria 2814
8 Ga0070689_100469090 3300005340 Bacteria 1074
9 Ga0070701_10065837 3300005438 Bacteria 1924
10 Ga0070705_100005307 3300005440 Bacteria 6270
11 Ga0070694_100050185 3300005444 Bacteria 2812
12 Ga0070681_10086730 3300005458 Bacteria 3083
13 Ga0068853_100270560 3300005539 Bacteria 1564
14 Ga0070686_100106507 3300005544 Bacteria 1903
15 Ga0070686_100175118 3300005544 Bacteria 1520
16 Ga0070704_100007181 3300005549 Bacteria 6621
17 Ga0068855_100019676 3300005563 Bacteria 8108
18 Ga0068855_100129653 3300005563 Bacteria 2881
19 Ga0068856_100001820 3300005614 Bacteria 22280
20 Ga0068856_100019786 3300005614 Bacteria 6534
21 Ga0068859_100012018 3300005617 Bacteria 8698
22 Ga0068863_100054734 3300005841 Bacteria 3780
23 Ga0068858_100169967 3300005842 Bacteria 2055
24 Ga0068858_100233041 3300005842 Bacteria 1746
25 Ga0068862_100030292 3300005844 Bacteria 4559
26 Ga0097621_100137124 3300006237 Bacteria 2088
27 Ga0068871_100152468 3300006358 Bacteria 1971
28 Ga0068871_100184864 3300006358 Unclassified 1793
29 Ga0075428_100359995 3300006844 Bacteria 1561
30 Ga0075429_100557676 3300006880 Bacteria 1004
31 Ga0097620_100012018 3300006931 Bacteria 8698
32 Ga0105240_10027183 3300009093 Bacteria 7495
33 Ga0105240_10319030 3300009093 Bacteria 1772
34 Ga0111539_10005063 3300009094 Bacteria 17117
35 Ga0111539_10075686 3300009094 Bacteria 3965
36 Ga0111539_10093271 3300009094 Bacteria 3537
37 Ga0111539_10104117 3300009094 Bacteria 3330
38 Ga0111539_10159385 3300009094 Bacteria 2639
39 Ga0105245_10161279 3300009098 Unclassified 2128
40 Ga0105242_10158909 3300009176 Unclassified 1977
41 Ga0105238_10006188 3300009551 Bacteria 11884
42 Ga0105238_10042557 3300009551 Bacteria 4599
43 Ga0157371_10105855 3300013102 Bacteria 1996
44 Ga0157370_10051556 3300013104 Plasmid 3931
45 Ga0157374_10039208 3300013296 Unclassified 4360
46 Ga0157374_10199911 3300013296 Bacteria 1957
47 Ga0157378_10326316 3300013297 Bacteria 1492
48 Ga0157378_10784438 3300013297 Bacteria 978
49 Ga0157375_10000080 3300013308 Bacteria 96665
50 Ga0163163_10000153 3300014325 Bacteria 71877
51 Ga0163163_10017122 3300014325 Bacteria 6751
52 Ga0163163_10236565 3300014325 Bacteria 1876
53 Ga0157379_10000125 3300014968 Bacteria 53764
54 Ga0207680_10032551 3300025903 Bacteria 2965
55 Ga0207705_10197952 3300025909 Unclassified 1522
56 Ga0207707_10198245 3300025912 Bacteria 1751
57 Ga0207695_10044268 3300025913 Bacteria 4735
58 Ga0207695_10106515 3300025913 Bacteria 2789
59 Ga0207695_10143614 3300025913 Bacteria 2333
60 Ga0207663_10015974 3300025916 Bacteria 4153
61 Ga0207657_10269267 3300025919 Bacteria 1354
62 Ga0207652_10076889 3300025921 Bacteria 2912
63 Ga0207694_10007117 3300025924 Bacteria 8500
64 Ga0207694_10039833 3300025924 Bacteria 3616
65 Ga0207694_10119340 3300025924 Bacteria 2104
66 Ga0207659_10144439 3300025926 Bacteria 1851
67 Ga0207686_10327608 3300025934 Unclassified 1146
68 Ga0207670_10048085 3300025936 Bacteria 2844
69 Ga0207667_10073260 3300025949 Bacteria 3559
70 Ga0207667_10343819 3300025949 Bacteria 1522
71 Ga0207667_10506806 3300025949 Bacteria 1224
72 Ga0207658_10342547 3300025986 Bacteria 1300
73 Ga0207658_10523133 3300025986 Bacteria 1059
74 Ga0207702_10001443 3300026078 Bacteria 23631
75 Ga0207702_10072851 3300026078 Bacteria 2961
76 Ga0207702_10203034 3300026078 Bacteria 1839
77 Ga0207641_10119295 3300026088 Bacteria 2351
78 Ga0207641_10587838 3300026088 Bacteria 1089
79 Ga0207674_10015521 3300026116 Bacteria 8367
80 Ga0207428_10058097 3300027907 Bacteria 3070
81 Ga0268265_10012954 3300028380 Bacteria 5661
82 Ga0265337_1000520 3300028556 Bacteria 20388
83 Ga0265337_1001880 3300028556 Bacteria 10014
84 Ga0265337_1002217 3300028556 Bacteria 9035
85 Ga0265337_1003123 3300028556 Bacteria 7301
86 Ga0265337_1012231 3300028556 Bacteria 2925
87 Ga0265337_1012911 3300028556 Bacteria 2822
88 Ga0265319_1000003 3300028563 Bacteria 340561
89 Ga0265319_1011978 3300028563 Bacteria 3525
90 Ga0265334_10017511 3300028573 Plasmid 2958
91 Ga0265334_10043917 3300028573 Bacteria 1737
92 Ga0265318_10031250 3300028577 Bacteria 2066
93 Ga0265323_10000183 3300028653 Bacteria 37704
94 Ga0265322_10021044 3300028654 Bacteria 1868
95 Ga0265336_10008204 3300028666 Bacteria 3674
96 Ga0265336_10019097 3300028666 Bacteria 2215
97 Ga0265338_10000036 3300028800 Bacteria 238689
98 Ga0265338_10000374 3300028800 Bacteria 80245
99 Ga0265338_10000701 3300028800 Bacteria 57480
100 Ga0265338_10001968 3300028800 Bacteria 31992
101 Ga0265338_10003664 3300028800 Bacteria 21402
102 Ga0265338_10006153 3300028800 Bacteria 15400
103 Ga0265338_10006543 3300028800 Bacteria 14807
104 Ga0265338_10010153 3300028800 Bacteria 11103
105 Ga0265338_10018053 3300028800 Bacteria 7570
106 Ga0265338_10021007 3300028800 Bacteria 6830
107 Ga0265338_10021856 3300028800 Bacteria 6649
108 Ga0265338_10025660 3300028800 Bacteria 5973
109 Ga0265338_10032158 3300028800 Bacteria 5126
110 Ga0265338_10032886 3300028800 Bacteria 5048
111 Ga0265338_10040097 3300028800 Unclassified 4404
112 Ga0265338_10048103 3300028800 Bacteria 3885
113 Ga0265338_10053757 3300028800 Bacteria 3599
114 Ga0265324_10000744 3300029957 Bacteria 21661
115 Ga0265324_10000973 3300029957 Bacteria 17735
116 Ga0265324_10004698 3300029957 Bacteria 6066
117 Ga0265324_10005217 3300029957 Bacteria 5658
118 Ga0265324_10007989 3300029957 Bacteria 4240
119 Ga0265324_10010972 3300029957 Bacteria 3471
120 Ga0265324_10034918 3300029957 Bacteria 1751
121 Ga0265324_10035333 3300029957 Bacteria 1740
122 Ga0265330_10133319 3300031235 Bacteria 1057
123 Ga0265328_10072712 3300031239 Bacteria 1264
124 Ga0265320_10000296 3300031240 Bacteria 40524
125 Ga0265320_10000488 3300031240 Bacteria 31056
126 Ga0265320_10002276 3300031240 Bacteria 13481
127 Ga0265320_10009365 3300031240 Bacteria 5913
128 Ga0265320_10023181 3300031240 Bacteria 3309
129 Ga0265325_10010961 3300031241 Bacteria 5222
130 Ga0265325_10046746 3300031241 Bacteria 2243
131 Ga0265325_10081567 3300031241 Bacteria 1607
132 Ga0265329_10003276 3300031242 Bacteria 7093
133 Ga0265340_10004729 3300031247 Bacteria 7568
134 Ga0265340_10017693 3300031247 Bacteria 3687
135 Ga0265339_10004175 3300031249 Bacteria 9915
136 Ga0265339_10129810 3300031249 Bacteria 1290
137 Ga0265331_10014744 3300031250 Bacteria 4150
138 Ga0265327_10000981 3300031251 Bacteria 40636
139 Ga0265327_10002378 3300031251 Bacteria 20022
140 Ga0265327_10023410 3300031251 Bacteria 3658
141 Ga0265327_10042527 3300031251 Bacteria 2439
142 Ga0265327_10063958 3300031251 Bacteria 1866
143 Ga0265316_10000008 3300031344 Bacteria 261948
144 Ga0265316_10008550 3300031344 Bacteria 9490
145 Ga0265316_10017392 3300031344 Bacteria 6217
146 Ga0265316_10049370 3300031344 Bacteria 3315
147 Ga0265316_10092785 3300031344 Bacteria 2301
148 Ga0265313_10009511 3300031595 Bacteria 6296
149 Ga0265314_10000037 3300031711 Bacteria 225790
150 Ga0265314_10000232 3300031711 Bacteria 83140
151 Ga0265314_10012173 3300031711 Bacteria 7045
152 Ga0265314_10159712 3300031711 Bacteria 1373
153 Ga0265314_10170812 3300031711 Bacteria 1313
154 Ga0265342_10050936 3300031712 Bacteria 2471
155 Ga0316576_10281611 3300031727 Bacteria 1245
156 Ga0373948_0025608 3300034817 Bacteria 1158
157 Ga0373938_0006737 3300034957 Bacteria 1997
158 Ga0373928_0000038 3300035084 Bacteria 22707
159 Ga0373934_0062971 3300035086 Bacteria 1479
160 Ga0373944_0035905 3300035089 Bacteria 1512
161 Ga0373951_0000830 3300035091 Bacteria 8396
162 Ga0373932_0000004 3300035112 Bacteria 412176
163 Ga0373945_0025535 3300035116 Bacteria 2053
164 Ga0373954_0002075 3300035118 Bacteria 8324
165 Ga0373962_0000029 3300035242 Bacteria 36959
166 Ga0373931_0000018 3300035691 Bacteria 190282
167 Ga0373935_0045150 3300035692 Bacteria 2779
168 Ga0373935_0087607 3300035692 Bacteria 2033
169 Ga0373927_0016332 3300035695 Bacteria 4898
170 Ga0373927_0081588 3300035695 Bacteria 2096
171 Ga0373947_0006717 3300035725 Bacteria 6674
172 Ga0373937_0001956 3300036401 Bacteria 17266
173 Ga0373937_0027309 3300036401 Bacteria 5162
174 Ga0373925_0000317 3300037068 Bacteria 50371
175 Ga0373925_0002783 3300037068 Bacteria 13812
176 Ga0373925_0010653 3300037068 Bacteria 6668
177 Ga0451577_0004497 3300042876 Bacteria 14695
178 Ga0451577_0004546 3300042876 Bacteria 14599
179 Ga0451577_0193591 3300042876 Bacteria 1834
180 Ga0453684_0005991 3300044712 Bacteria 23549
181 Ga0453684_0011439 3300044712 Bacteria 14883
182 Ga0453684_0029376 3300044712 Bacteria 7807
183 Ga0453684_0175180 3300044712 Bacteria 2524
184 Ga0453684_0288215 3300044712 Bacteria 1870
185 Ga0453684_0377778 3300044712 Bacteria 1592
186 Ga0453684_0775754 3300044712 Bacteria 1036
187 Ga0451576_0040459 3300045051 Bacteria 4933
188 Ga0451576_0078954 3300045051 Bacteria 3424
189 Ga0451576_0275450 3300045051 Unclassified 1759
190 Ga0451576_0307426 3300045051 Bacteria 1659
191 Ga0451576_0319990 3300045051 Unclassified 1623
192 Ga0451576_0344939 3300045051 Unclassified 1559
193 Ga0495592_0000161 3300046454 Bacteria 59388
194 Ga0495629_0240270 3300046459 Bacteria 1247
195 Ga0495580_0003593 3300046472 Bacteria 13150
196 Ga0495580_0011220 3300046472 Bacteria 6933
197 Ga0495582_0299025 3300046473 Bacteria 925
198 Ga0495662_0013969 3300046476 Bacteria 3909
199 Ga0495664_0067947 3300046477 Unclassified 2127
200 Ga0495618_0006506 3300046514 Bacteria 7092
201 Ga0495628_0000142 3300046516 Bacteria 61312
202 Ga0495630_0000135 3300046517 Bacteria 58009
203 Ga0495630_0034881 3300046517 Bacteria 3758
204 Ga0495630_0065297 3300046517 Bacteria 2735
205 Ga0495630_0116166 3300046517 Unclassified 2028
206 Ga0495630_0212510 3300046517 Bacteria 1476
207 Ga0495630_0223729 3300046517 Bacteria 1437
208 Ga0495666_0003419 3300046526 Bacteria 8005
209 Ga0495666_0220581 3300046526 Bacteria 868
210 Ga0495652_0364290 3300046529 Bacteria 1032
211 Ga0495640_0017280 3300046533 Bacteria 5378
212 Ga0495640_0040649 3300046533 Bacteria 3255
213 Ga0495640_0059572 3300046533 Bacteria 2600
214 Ga0495640_0083549 3300046533 Bacteria 2119
215 Ga0495586_0000033 3300046535 Bacteria 89808
216 Ga0495586_0000762 3300046535 Bacteria 18510
217 Ga0495586_0016900 3300046535 Bacteria 3881
218 Ga0495586_0036572 3300046535 Bacteria 2636
219 Ga0495586_0274027 3300046535 Bacteria 965
220 Ga0495645_0051252 3300046543 Plasmid 3003
221 Ga0495645_0176186 3300046543 Bacteria 1469
222 Ga0495622_0027311 3300046557 Bacteria 2664
223 Ga0495667_0009041 3300046559 Bacteria 6771
224 Ga0495667_0041224 3300046559 Bacteria 3062
225 Ga0495634_0005152 3300046642 Bacteria 10092
226 Ga0495634_0011904 3300046642 Bacteria 6319
227 Ga0495657_0077663 3300046675 Unclassified 2154
228 Ga0495599_0020429 3300046678 Bacteria 4124
229 Ga0495647_0025948 3300046681 Unclassified 2144
230 Ga0495658_0036972 3300046683 Unclassified 2697
231 Ga0495658_0091596 3300046683 Unclassified 1801
232 Ga0495613_0006479 3300046689 Bacteria 8748
233 Ga0495581_0005945 3300047315 Bacteria 7075
234 Ga0495581_0060332 3300047315 Unclassified 2192
235 Ga0495674_0001612 3300047319 Bacteria 22109
236 Ga0495674_0022568 3300047319 Bacteria 5803
237 Ga0495674_0122630 3300047319 Unclassified 2195
238 Ga0495676_0077429 3300047321 Bacteria 2536
239 Ga0495676_0125205 3300047321 Bacteria 1863
240 Ga0495680_0028856 3300047322 Bacteria 4547
241 Ga0495680_0075621 3300047322 Bacteria 2555
242 Ga0495675_0022570 3300047444 Unclassified 4012
243 Ga0496115_0054646 3300048918 Bacteria 3207
244 Ga0501031_0000638 3300049568 Bacteria 20752
245 Ga0501032_0015768 3300049569 Bacteria 5329
246 Ga0501033_0004029 3300049570 Bacteria 11864
247 Ga0501033_0109622 3300049570 Unclassified 2010
248 Ga0501043_0077016 3300049579 Bacteria 2620
249 Ga0501047_0194622 3300049581 Bacteria 1890
250 Ga0501080_0160242 3300049742 Bacteria 2078
251 Ga0501035_0007736 3300049822 Bacteria 10037
252 Ga0501035_0098681 3300049822 Bacteria 2564
253 Ga0501035_0130306 3300049822 Bacteria 2193
254 Ga0501044_0000611 3300049823 Bacteria 43362
255 Ga0501044_0106633 3300049823 Bacteria 2814
256 nmdc:mga08y16_110644_c1 3300050511 Bacteria 1923
257 nmdc:mga08y16_235299_c1 3300050511 Bacteria 1894
258 nmdc:mga08y16_37732_c1 3300050511 Bacteria 5072
259 Ga0495601_0149081 3300053077 Bacteria 1527
260 Ga0495619_0333521 3300053085 Bacteria 1050
261 Ga0500650_0013578 3300053098 Bacteria 3418

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046526 Ga0495666_0220581 Ga0495666_0220581_27_788 246
2 3300035086 Ga0373934_0062971 Ga0373934_0062971_610_1446 257
3 3300046473 Ga0495582_0299025 Ga0495582_0299025_29_838 260
4 3300005842 Ga0068858_100233041 Ga0068858_1002330412 265
5 3300046529 Ga0495652_0364290 Ga0495652_0364290_164_985 266
6 3300046535 Ga0495586_0274027 Ga0495586_0274027_13_849 266
7 3300005844 Ga0068862_100030292 Ga0068862_1000302924 272
8 3300028380 Ga0268265_10012954 Ga0268265_100129543 272
9 3300009094 Ga0111539_10159385 Ga0111539_101593853 285
10 3300035118 Ga0373954_0002075 Ga0373954_0002075_4666_5586 285
11 3300036401 Ga0373937_0001956 Ga0373937_0001956_5623_6543 285
12 3300042876 Ga0451577_0193591 Ga0451577_0193591_609_1532 285
13 3300045051 Ga0451576_0307426 Ga0451576_0307426_249_1169 285
14 3300046459 Ga0495629_0240270 Ga0495629_0240270_238_1221 285
15 3300046514 Ga0495618_0006506 Ga0495618_0006506_3376_4359 285
16 3300046517 Ga0495630_0000135 Ga0495630_0000135_3293_4219 285
17 3300046517 Ga0495630_0065297 Ga0495630_0065297_1382_2302 285
18 3300046526 Ga0495666_0003419 Ga0495666_0003419_2441_3367 285
19 3300046533 Ga0495640_0017280 Ga0495640_0017280_2544_3470 285
20 3300046533 Ga0495640_0083549 Ga0495640_0083549_82_1002 285
21 3300046535 Ga0495586_0000033 Ga0495586_0000033_33093_34019 285
22 3300046535 Ga0495586_0000762 Ga0495586_0000762_13227_14210 285
23 3300046559 Ga0495667_0041224 Ga0495667_0041224_49_1032 285
24 3300046642 Ga0495634_0005152 Ga0495634_0005152_746_1672 285
25 3300046642 Ga0495634_0011904 Ga0495634_0011904_2578_3561 285
26 3300046681 Ga0495647_0025948 Ga0495647_0025948_1157_2083 285
27 3300046683 Ga0495658_0036972 Ga0495658_0036972_589_1515 285
28 3300046689 Ga0495613_0006479 Ga0495613_0006479_5379_6299 285
29 3300047315 Ga0495581_0005945 Ga0495581_0005945_3196_4122 285
30 3300047319 Ga0495674_0001612 Ga0495674_0001612_18624_19550 285
31 3300047321 Ga0495676_0125205 Ga0495676_0125205_792_1718 285
32 3300047322 Ga0495680_0028856 Ga0495680_0028856_1065_1985 285
33 3300049579 Ga0501043_0077016 Ga0501043_0077016_1594_2571 285
34 3300049581 Ga0501047_0194622 Ga0501047_0194622_315_1292 285
35 3300025986 Ga0207658_10523133 Ga0207658_105231331 287
36 3300031250 Ga0265331_10014744 Ga0265331_100147443 287
37 3300031711 Ga0265314_10000232 Ga0265314_1000023220 287
38 3300034957 Ga0373938_0006737 Ga0373938_0006737_994_1929 287
39 3300045051 Ga0451576_0319990 Ga0451576_0319990_243_1163 287
40 3300031344 Ga0265316_10000008 Ga0265316_1000000850 288
41 3300044712 Ga0453684_0029376 Ga0453684_0029376_2876_3763 288
42 3300044712 Ga0453684_0288215 Ga0453684_0288215_436_1323 288
43 3300044712 Ga0453684_0377778 Ga0453684_0377778_239_1144 288
44 3300025913 Ga0207695_10143614 Ga0207695_101436143 290
45 3300025919 Ga0207657_10269267 Ga0207657_102692671 291
46 3300025986 Ga0207658_10342547 Ga0207658_103425471 292
47 3300044712 Ga0453684_0005991 Ga0453684_0005991_19305_20225 292
48 3300006358 Ga0068871_100152468 Ga0068871_1001524682 293
49 3300014968 Ga0157379_10000125 Ga0157379_1000012548 293
50 3300035692 Ga0373935_0045150 Ga0373935_0045150_143_1057 293
51 3300035695 Ga0373927_0081588 Ga0373927_0081588_698_1612 293
52 3300037068 Ga0373925_0010653 Ga0373925_0010653_1565_2479 293
53 3300042876 Ga0451577_0004546 Ga0451577_0004546_2189_3109 293
54 3300044712 Ga0453684_0011439 Ga0453684_0011439_414_1334 293
55 3300046472 Ga0495580_0003593 Ga0495580_0003593_10592_11506 293
56 3300046472 Ga0495580_0011220 Ga0495580_0011220_4026_4955 293
57 3300046517 Ga0495630_0034881 Ga0495630_0034881_2767_3726 293
58 3300046535 Ga0495586_0036572 Ga0495586_0036572_159_1118 293
59 3300046559 Ga0495667_0009041 Ga0495667_0009041_4446_5405 293
60 3300047322 Ga0495680_0075621 Ga0495680_0075621_340_1299 293
61 3300049568 Ga0501031_0000638 Ga0501031_0000638_17520_18572 293
62 3300049569 Ga0501032_0015768 Ga0501032_0015768_3241_4293 293
63 3300049570 Ga0501033_0004029 Ga0501033_0004029_1959_3011 293
64 3300049822 Ga0501035_0007736 Ga0501035_0007736_7045_8097 293
65 3300049823 Ga0501044_0000611 Ga0501044_0000611_27539_28591 293
66 3300009551 Ga0105238_10042557 Ga0105238_100425575 294
67 3300025924 Ga0207694_10039833 Ga0207694_100398335 294
68 3300026078 Ga0207702_10203034 Ga0207702_102030342 294
69 3300028800 Ga0265338_10032886 Ga0265338_100328864 294
70 3300028800 Ga0265338_10048103 Ga0265338_100481034 294
71 3300031240 Ga0265320_10009365 Ga0265320_100093653 294
72 3300031241 Ga0265325_10081567 Ga0265325_100815672 294
73 3300031711 Ga0265314_10159712 Ga0265314_101597122 294
74 3300036401 Ga0373937_0027309 Ga0373937_0027309_3078_4037 294
75 3300044712 Ga0453684_0775754 Ga0453684_0775754_67_987 294
76 3300046543 Ga0495645_0176186 Ga0495645_0176186_351_1271 294
77 3300053077 Ga0495601_0149081 Ga0495601_0149081_298_1218 294
78 3300046517 Ga0495630_0223729 Ga0495630_0223729_29_1015 296
79 3300047319 Ga0495674_0122630 Ga0495674_0122630_953_1873 296
80 3300006880 Ga0075429_100557676 Ga0075429_1005576761 297
81 3300009094 Ga0111539_10005063 Ga0111539_100050637 297
82 3300027907 Ga0207428_10058097 Ga0207428_100580972 297
83 3300050511 nmdc:mga08y16_37732_c1 nmdc:mga08y16_37732_c1_2898_3818 297
84 3300003323 rootH1_10343203 rootH1_103432032 298
85 3300005544 Ga0070686_100175118 Ga0070686_1001751182 298
86 3300009094 Ga0111539_10104117 Ga0111539_101041173 298
87 3300028556 Ga0265337_1012911 Ga0265337_10129113 298
88 3300029957 Ga0265324_10000744 Ga0265324_1000074416 298
89 3300029957 Ga0265324_10004698 Ga0265324_100046984 298
90 3300029957 Ga0265324_10007989 Ga0265324_100079893 298
91 3300029957 Ga0265324_10035333 Ga0265324_100353332 298
92 3300031241 Ga0265325_10010961 Ga0265325_100109615 298
93 3300034817 Ga0373948_0025608 Ga0373948_0025608_110_1135 298
94 3300042876 Ga0451577_0004497 Ga0451577_0004497_10942_11862 298
95 3300045051 Ga0451576_0344939 Ga0451576_0344939_284_1315 298
96 3300046675 Ga0495657_0077663 Ga0495657_0077663_136_1056 298
97 3300050511 nmdc:mga08y16_110644_c1 nmdc:mga08y16_110644_c1_90_1010 298
98 3300005327 Ga0070658_10214126 Ga0070658_102141261 299
99 3300005335 Ga0070666_10036151 Ga0070666_100361512 299
100 3300005340 Ga0070689_100014305 Ga0070689_1000143058 299
101 3300005340 Ga0070689_100066246 Ga0070689_1000662462 299
102 3300005340 Ga0070689_100469090 Ga0070689_1004690901 299
103 3300005458 Ga0070681_10086730 Ga0070681_100867303 299
104 3300005539 Ga0068853_100270560 Ga0068853_1002705601 299
105 3300005563 Ga0068855_100019676 Ga0068855_10001967610 299
106 3300005563 Ga0068855_100129653 Ga0068855_1001296534 299
107 3300005614 Ga0068856_100019786 Ga0068856_1000197868 299
108 3300005617 Ga0068859_100012018 Ga0068859_1000120184 299
109 3300005841 Ga0068863_100054734 Ga0068863_1000547342 299
110 3300005842 Ga0068858_100169967 Ga0068858_1001699672 299
111 3300006237 Ga0097621_100137124 Ga0097621_1001371243 299
112 3300006358 Ga0068871_100184864 Ga0068871_1001848642 299
113 3300006844 Ga0075428_100359995 Ga0075428_1003599952 299
114 3300006931 Ga0097620_100012018 Ga0097620_1000120185 299
115 3300009093 Ga0105240_10027183 Ga0105240_100271838 299
116 3300009093 Ga0105240_10319030 Ga0105240_103190302 299
117 3300009094 Ga0111539_10075686 Ga0111539_100756862 299
118 3300009094 Ga0111539_10093271 Ga0111539_100932712 299
119 3300009098 Ga0105245_10161279 Ga0105245_101612792 299
120 3300009176 Ga0105242_10158909 Ga0105242_101589092 299
121 3300009551 Ga0105238_10006188 Ga0105238_100061887 299
122 3300013102 Ga0157371_10105855 Ga0157371_101058552 299
123 3300013104 Ga0157370_10051556 Ga0157370_100515562 299
124 3300013296 Ga0157374_10039208 Ga0157374_100392084 299
125 3300013296 Ga0157374_10199911 Ga0157374_101999113 299
126 3300013297 Ga0157378_10326316 Ga0157378_103263161 299
127 3300013297 Ga0157378_10784438 Ga0157378_107844381 299
128 3300013308 Ga0157375_10000080 Ga0157375_1000008018 299
129 3300014325 Ga0163163_10000153 Ga0163163_1000015339 299
130 3300014325 Ga0163163_10017122 Ga0163163_100171223 299
131 3300014325 Ga0163163_10236565 Ga0163163_102365652 299
132 3300025903 Ga0207680_10032551 Ga0207680_100325512 299
133 3300025909 Ga0207705_10197952 Ga0207705_101979522 299
134 3300025912 Ga0207707_10198245 Ga0207707_101982451 299
135 3300025913 Ga0207695_10044268 Ga0207695_100442686 299
136 3300025913 Ga0207695_10106515 Ga0207695_101065154 299
137 3300025916 Ga0207663_10015974 Ga0207663_100159741 299
138 3300025921 Ga0207652_10076889 Ga0207652_100768893 299
139 3300025924 Ga0207694_10007117 Ga0207694_100071173 299
140 3300025924 Ga0207694_10119340 Ga0207694_101193402 299
141 3300025926 Ga0207659_10144439 Ga0207659_101444391 299
142 3300025934 Ga0207686_10327608 Ga0207686_103276082 299
143 3300025936 Ga0207670_10048085 Ga0207670_100480853 299
144 3300025949 Ga0207667_10073260 Ga0207667_100732605 299
145 3300025949 Ga0207667_10343819 Ga0207667_103438192 299
146 3300025949 Ga0207667_10506806 Ga0207667_105068061 299
147 3300026078 Ga0207702_10072851 Ga0207702_100728512 299
148 3300026088 Ga0207641_10119295 Ga0207641_101192953 299
149 3300026088 Ga0207641_10587838 Ga0207641_105878382 299
150 3300026116 Ga0207674_10015521 Ga0207674_100155216 299
151 3300028556 Ga0265337_1000520 Ga0265337_10005203 299
152 3300028556 Ga0265337_1001880 Ga0265337_100188011 299
153 3300028556 Ga0265337_1002217 Ga0265337_10022173 299
154 3300028556 Ga0265337_1003123 Ga0265337_10031233 299
155 3300028556 Ga0265337_1012231 Ga0265337_10122314 299
156 3300028563 Ga0265319_1000003 Ga0265319_1000003235 299
157 3300028563 Ga0265319_1011978 Ga0265319_10119783 299
158 3300028573 Ga0265334_10017511 Ga0265334_100175114 299
159 3300028573 Ga0265334_10043917 Ga0265334_100439172 299
160 3300028577 Ga0265318_10031250 Ga0265318_100312502 299
161 3300028653 Ga0265323_10000183 Ga0265323_100001833 299
162 3300028654 Ga0265322_10021044 Ga0265322_100210441 299
163 3300028666 Ga0265336_10008204 Ga0265336_100082042 299
164 3300028666 Ga0265336_10019097 Ga0265336_100190972 299
165 3300028800 Ga0265338_10000036 Ga0265338_10000036189 299
166 3300028800 Ga0265338_10000374 Ga0265338_1000037421 299
167 3300028800 Ga0265338_10000701 Ga0265338_1000070138 299
168 3300028800 Ga0265338_10001968 Ga0265338_1000196829 299
169 3300028800 Ga0265338_10003664 Ga0265338_1000366415 299
170 3300028800 Ga0265338_10006153 Ga0265338_1000615313 299
171 3300028800 Ga0265338_10006543 Ga0265338_100065434 299
172 3300028800 Ga0265338_10010153 Ga0265338_1001015312 299
173 3300028800 Ga0265338_10018053 Ga0265338_100180533 299
174 3300028800 Ga0265338_10021007 Ga0265338_100210073 299
175 3300028800 Ga0265338_10021856 Ga0265338_100218569 299
176 3300028800 Ga0265338_10025660 Ga0265338_100256604 299
177 3300028800 Ga0265338_10032158 Ga0265338_100321582 299
178 3300028800 Ga0265338_10040097 Ga0265338_100400973 299
179 3300028800 Ga0265338_10053757 Ga0265338_100537572 299
180 3300029957 Ga0265324_10000973 Ga0265324_1000097313 299
181 3300029957 Ga0265324_10005217 Ga0265324_100052173 299
182 3300029957 Ga0265324_10010972 Ga0265324_100109723 299
183 3300029957 Ga0265324_10034918 Ga0265324_100349182 299
184 3300031235 Ga0265330_10133319 Ga0265330_101333191 299
185 3300031239 Ga0265328_10072712 Ga0265328_100727122 299
186 3300031240 Ga0265320_10000296 Ga0265320_1000029637 299
187 3300031240 Ga0265320_10000488 Ga0265320_100004889 299
188 3300031240 Ga0265320_10002276 Ga0265320_1000227616 299
189 3300031240 Ga0265320_10023181 Ga0265320_100231813 299
190 3300031241 Ga0265325_10046746 Ga0265325_100467463 299
191 3300031242 Ga0265329_10003276 Ga0265329_100032767 299
192 3300031247 Ga0265340_10004729 Ga0265340_100047293 299
193 3300031247 Ga0265340_10017693 Ga0265340_100176933 299
194 3300031249 Ga0265339_10004175 Ga0265339_100041758 299
195 3300031249 Ga0265339_10129810 Ga0265339_101298102 299
196 3300031251 Ga0265327_10000981 Ga0265327_100009813 299
197 3300031251 Ga0265327_10002378 Ga0265327_100023783 299
198 3300031251 Ga0265327_10023410 Ga0265327_100234102 299
199 3300031251 Ga0265327_10042527 Ga0265327_100425272 299
200 3300031251 Ga0265327_10063958 Ga0265327_100639582 299
201 3300031344 Ga0265316_10008550 Ga0265316_1000855010 299
202 3300031344 Ga0265316_10017392 Ga0265316_100173925 299
203 3300031344 Ga0265316_10049370 Ga0265316_100493701 299
204 3300031344 Ga0265316_10092785 Ga0265316_100927852 299
205 3300031595 Ga0265313_10009511 Ga0265313_100095117 299
206 3300031711 Ga0265314_10000037 Ga0265314_10000037130 299
207 3300031711 Ga0265314_10012173 Ga0265314_100121736 299
208 3300031711 Ga0265314_10170812 Ga0265314_101708121 299
209 3300031712 Ga0265342_10050936 Ga0265342_100509362 299
210 3300031727 Ga0316576_10281611 Ga0316576_102816111 299
211 3300035084 Ga0373928_0000038 Ga0373928_0000038_782_1768 299
212 3300035089 Ga0373944_0035905 Ga0373944_0035905_36_1022 299
213 3300035091 Ga0373951_0000830 Ga0373951_0000830_4898_5884 299
214 3300035112 Ga0373932_0000004 Ga0373932_0000004_16457_17443 299
215 3300035116 Ga0373945_0025535 Ga0373945_0025535_1123_2043 299
216 3300035242 Ga0373962_0000029 Ga0373962_0000029_794_1780 299
217 3300035691 Ga0373931_0000018 Ga0373931_0000018_172839_173825 299
218 3300035692 Ga0373935_0087607 Ga0373935_0087607_1042_1962 299
219 3300035695 Ga0373927_0016332 Ga0373927_0016332_113_1099 299
220 3300035725 Ga0373947_0006717 Ga0373947_0006717_2094_3014 299
221 3300037068 Ga0373925_0000317 Ga0373925_0000317_40639_41625 299
222 3300037068 Ga0373925_0002783 Ga0373925_0002783_3072_3992 299
223 3300044712 Ga0453684_0175180 Ga0453684_0175180_69_989 299
224 3300045051 Ga0451576_0040459 Ga0451576_0040459_1302_2222 299
225 3300045051 Ga0451576_0078954 Ga0451576_0078954_1676_2596 299
226 3300045051 Ga0451576_0275450 Ga0451576_0275450_672_1694 299
227 3300046454 Ga0495592_0000161 Ga0495592_0000161_32585_33568 299
228 3300046476 Ga0495662_0013969 Ga0495662_0013969_238_1221 299
229 3300046477 Ga0495664_0067947 Ga0495664_0067947_274_1257 299
230 3300046516 Ga0495628_0000142 Ga0495628_0000142_28492_29475 299
231 3300046517 Ga0495630_0116166 Ga0495630_0116166_380_1363 299
232 3300046517 Ga0495630_0212510 Ga0495630_0212510_14_934 299
233 3300046533 Ga0495640_0040649 Ga0495640_0040649_360_1343 299
234 3300046533 Ga0495640_0059572 Ga0495640_0059572_1326_2285 299
235 3300046535 Ga0495586_0016900 Ga0495586_0016900_2610_3593 299
236 3300046543 Ga0495645_0051252 Ga0495645_0051252_227_1210 299
237 3300046557 Ga0495622_0027311 Ga0495622_0027311_1645_2565 299
238 3300046678 Ga0495599_0020429 Ga0495599_0020429_1677_2660 299
239 3300046683 Ga0495658_0091596 Ga0495658_0091596_185_1168 299
240 3300047315 Ga0495581_0060332 Ga0495581_0060332_324_1307 299
241 3300047319 Ga0495674_0022568 Ga0495674_0022568_505_1488 299
242 3300047321 Ga0495676_0077429 Ga0495676_0077429_1535_2455 299
243 3300047444 Ga0495675_0022570 Ga0495675_0022570_2955_3875 299
244 3300048918 Ga0496115_0054646 Ga0496115_0054646_892_1812 299
245 3300049570 Ga0501033_0109622 Ga0501033_0109622_667_1593 299
246 3300049822 Ga0501035_0098681 Ga0501035_0098681_695_1777 299
247 3300050511 nmdc:mga08y16_235299_c1 nmdc:mga08y16_235299_c1_557_1495 299
248 3300053085 Ga0495619_0333521 Ga0495619_0333521_51_971 299
249 3300053098 Ga0500650_0013578 Ga0500650_0013578_2287_3207 299
250 3300005614 Ga0068856_100001820 Ga0068856_10000182022 303
251 3300026078 Ga0207702_10001443 Ga0207702_1000144322 303
252 3300000545 CNXas_1000440 CNXas_10004403 304
253 3300005330 Ga0070690_100130898 Ga0070690_1001308981 304
254 3300005438 Ga0070701_10065837 Ga0070701_100658372 304
255 3300005440 Ga0070705_100005307 Ga0070705_1000053074 304
256 3300005444 Ga0070694_100050185 Ga0070694_1000501853 304
257 3300005544 Ga0070686_100106507 Ga0070686_1001065073 304
258 3300005549 Ga0070704_100007181 Ga0070704_1000071813 304
259 3300049742 Ga0501080_0160242 Ga0501080_0160242_148_1245 304
260 3300049822 Ga0501035_0130306 Ga0501035_0130306_378_1475 304
261 3300049823 Ga0501044_0106633 Ga0501044_0106633_1407_2474 304

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00589

Phage_integrase

Phage integrase family

166

347

0.94

PF02899

Phage_int_SAM_1

Phage integrase, N-terminal SAM-like domain

27

104

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nrw-assembly1.cif.gz_A crystal structure of the n-terminal domain of phage integrase/site-specific recombinase (tnp) from haloarcula marismortui, northeast structural genomics consortium target hmr208a 0.8882 4 112
2kd1-assembly1.cif.gz_A solution nmr structure of the integrase-like domain from bacillus cereus ordered locus bc_1272. northeast structural genomics consortium target bcr268f 0.819 2 113
3nrw-assembly1.cif.gz_A crystal structure of the n-terminal domain of phage integrase/site-specific recombinase (tnp) from haloarcula marismortui, northeast structural genomics consortium target hmr208a 0.817 4 112
5dcf-assembly1.cif.gz_A c-terminal domain of xerd recombinase in complex with gamma domain of ftsk 0.8072 122 294
2kob-assembly1.cif.gz_A solution nmr structure of clolep_01837 (fragment 61-160) from clostridium leptum. northeast structural genomics consortium target qlr8a 0.7476 2 114
ID Description Score Start End Superfamily
af_P0A8P6_5_99_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.967 3 106 1.10.150.130
af_Q2FY74_2_96_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9469 3 106 1.10.150.130
af_P0A8P6_5_99_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9372 3 106 1.10.150.130
1a0pA01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9225 2 108 1.10.150.130
af_Q2FY74_2_96_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.918 3 106 1.10.150.130
ID Description Score Start End GO Terms
AF-A0A381I8U0-F1-model_v4 Tyrosine recombinase 0.9477 142 238 GO:0003677
GO:0006310
GO:0015074
AF-X1IKC8-F1-model_v4 Tyr recombinase domain-containing protein 0.9363 119 244 GO:0003677
GO:0006310
GO:0015074
AF-X1KSG8-F1-model_v4 Tyr recombinase domain-containing protein 0.9352 118 258 GO:0003677
GO:0006310
GO:0015074
AF-A0A3D0J356-F1-model_v4 Integrase 0.9291 112 259 GO:0003677
GO:0006310
GO:0015074
AF-X1KSG8-F1-model_v4 Tyr recombinase domain-containing protein 0.9165 118 258 GO:0003677
GO:0006310
GO:0015074

Feature Viewer

pLDDT pTM Quality
80.35 0.59 Medium
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Predicted Structure (AlphaFold2)

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