F370492

General Info

Members Datasets Scaffolds Average Seq Length
261 171 522 221

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0084952|Ga0436364_0084952_52_846
Length 264
Sequence MTASTFDTLLWNDYITMERKSPAVNSRRSYDSSGRRERARQARDQIAGVAEDLFLCRGYAATTVAAIAAQARVSVETIYKGFGGKAGLVRAIVERGLAGAGPVPAEQRSDQIRDTEPDPRQILTAWGAFITEIAPRTAPILLLARDAAASDPELAALLDEVSAARLERMTVNARALSEAGHLRSGLTLVQAADILWTYSSPELYELLVLDRGWSPDHYGRFVAQAMIAALLPPTAAGPDPPANGPVPGKQHSRPDQPNLQCQAR

Samples

Sample ID Description Type Environment
1 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
45 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
69 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
109 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
110 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
111 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
113 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
114 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
115 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
116 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
117 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
118 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
119 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
120 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
124 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
125 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
126 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
127 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
128 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
131 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
132 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
133 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
134 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
135 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
136 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
137 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
138 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
139 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
140 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
141 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
142 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
143 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
144 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
145 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
146 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
147 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
148 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
149 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
150 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
151 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
152 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
153 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
154 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
155 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
158 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
159 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
160 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
161 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
162 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
165 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
166 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
167 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
168 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
169 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
170 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
171 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.62
Metatranscriptomes 0
Isolates 0.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.15
Nodule 0
Rhizoplane 12.64
Rhizosphere 78.16
Stem 0
Stem Tuber 0
Unclassified 31.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436364_0084952 3300037853 Unclassified 932
2 rootL2_10245311 3300003322 Bacteria 4136
3 Ga0070658_10373248 3300005327 Bacteria 1223
4 Ga0070683_100089233 3300005329 Bacteria 2893
5 Ga0070666_10109136 3300005335 Unclassified 1912
6 Ga0070680_100331548 3300005336 Bacteria 1292
7 Ga0070682_100065638 3300005337 Unclassified 2307
8 Ga0070682_100166097 3300005337 Bacteria 1529
9 Ga0070691_10111675 3300005341 Unclassified 1368
10 Ga0070674_100190026 3300005356 Bacteria 1579
11 Ga0070667_100182525 3300005367 Bacteria 1856
12 Ga0070667_100949161 3300005367 Bacteria 801
13 Ga0070709_10022022 3300005434 Unclassified 3722
14 Ga0070709_10299555 3300005434 Unclassified 1174
15 Ga0070714_100041285 3300005435 Bacteria 3892
16 Ga0070714_100103230 3300005435 Bacteria 2514
17 Ga0070714_100282583 3300005435 Unclassified 1542
18 Ga0070713_100035430 3300005436 Unclassified 4017
19 Ga0070713_100044803 3300005436 Bacteria 3622
20 Ga0070713_100204502 3300005436 Bacteria 1785
21 Ga0070710_10006900 3300005437 Bacteria 5479
22 Ga0070710_10011144 3300005437 Unclassified 4435
23 Ga0070711_100020551 3300005439 Bacteria 4256
24 Ga0070700_100710490 3300005441 Unclassified 800
25 Ga0070708_100122921 3300005445 Bacteria 2396
26 Ga0070663_100012945 3300005455 Bacteria 5297
27 Ga0070678_100087448 3300005456 Unclassified 2380
28 Ga0070662_100134658 3300005457 Bacteria 1909
29 Ga0070681_10401273 3300005458 Bacteria 1282
30 Ga0070706_100007106 3300005467 Bacteria 10533
31 Ga0070706_100069786 3300005467 Bacteria 3250
32 Ga0070707_100007126 3300005468 Bacteria 10369
33 Ga0070707_100081879 3300005468 Bacteria 3117
34 Ga0070707_100102660 3300005468 Unclassified 2771
35 Ga0070707_100188595 3300005468 Bacteria 2010
36 Ga0070698_100012534 3300005471 Bacteria 8976
37 Ga0070698_100113985 3300005471 Bacteria 2668
38 Ga0070698_100272776 3300005471 Unclassified 1623
39 Ga0070699_100019507 3300005518 Bacteria 5840
40 Ga0070684_100459047 3300005535 Bacteria 1178
41 Ga0070697_100023983 3300005536 Bacteria 4855
42 Ga0070697_100295901 3300005536 Unclassified 1391
43 Ga0070672_100498461 3300005543 Bacteria 1053
44 Ga0070686_100132554 3300005544 Bacteria 1725
45 Ga0070695_100024225 3300005545 Bacteria 3736
46 Ga0070665_100185832 3300005548 Bacteria 2079
47 Ga0070665_100382683 3300005548 Unclassified 1414
48 Ga0068855_100071081 3300005563 Bacteria 4047
49 Ga0070664_100022424 3300005564 Bacteria 5206
50 Ga0070664_100498306 3300005564 Bacteria 1122
51 Ga0068857_100070298 3300005577 Unclassified 3118
52 Ga0068857_100388296 3300005577 Unclassified 1297
53 Ga0068856_100052013 3300005614 Plasmid 4038
54 Ga0070702_100106469 3300005615 Bacteria 1730
55 Ga0068852_100446608 3300005616 Unclassified 1279
56 Ga0068864_100123060 3300005618 Unclassified 2322
57 Ga0068864_100179082 3300005618 Bacteria 1937
58 Ga0068861_100064531 3300005719 Unclassified 2818
59 Ga0068861_100070991 3300005719 Bacteria 2698
60 Ga0068863_100252230 3300005841 Unclassified 1705
61 Ga0068858_100316154 3300005842 Unclassified 1492
62 Ga0068860_100545576 3300005843 Unclassified 1161
63 Ga0070717_10015299 3300006028 Bacteria 5923
64 Ga0070717_10019721 3300006028 Bacteria 5292
65 Ga0070717_10476168 3300006028 Bacteria 1127
66 Ga0070715_10042958 3300006163 Bacteria 1903
67 Ga0070715_10065472 3300006163 Bacteria 1608
68 Ga0070716_100074094 3300006173 Unclassified 2010
69 Ga0070712_100012849 3300006175 Bacteria 5332
70 Ga0070712_100017729 3300006175 Unclassified 4612
71 Ga0068871_100179709 3300006358 Unclassified 1818
72 Ga0068871_100674834 3300006358 Unclassified 945
73 Ga0068865_100949588 3300006881 Bacteria 750
74 Ga0099794_10236421 3300007265 Unclassified 941
75 Ga0105240_10051868 3300009093 Bacteria 5159
76 Ga0105240_10489249 3300009093 Unclassified 1370
77 Ga0105245_10079704 3300009098 Unclassified 2990
78 Ga0105245_10155039 3300009098 Bacteria 2169
79 Ga0105245_10552908 3300009098 Unclassified 1173
80 Ga0105247_10122302 3300009101 Unclassified 1688
81 Ga0105243_10048442 3300009148 Unclassified 3350
82 Ga0105248_10117238 3300009177 Bacteria 3003
83 Ga0105248_10237110 3300009177 Bacteria 2053
84 Ga0105249_10042844 3300009553 Bacteria 4117
85 Ga0105249_10076937 3300009553 Bacteria 3094
86 Ga0105239_10145639 3300010375 Bacteria 2641
87 Ga0157370_10473874 3300013104 Bacteria 1150
88 Ga0157369_10111988 3300013105 Unclassified 2900
89 Ga0157369_10243103 3300013105 Bacteria 1880
90 Ga0157369_10702196 3300013105 Bacteria 1042
91 Ga0163162_10072050 3300013306 Unclassified 3509
92 Ga0157372_10145895 3300013307 Unclassified 2729
93 Ga0157372_10254562 3300013307 Bacteria 2038
94 Ga0157375_10041160 3300013308 Bacteria 4459
95 Ga0157375_10424150 3300013308 Unclassified 1496
96 Ga0163163_10024542 3300014325 Bacteria 5738
97 Ga0157380_10074182 3300014326 Bacteria 2761
98 Ga0157379_10050810 3300014968 Unclassified 3701
99 Ga0157376_10049512 3300014969 Unclassified 3481
100 Ga0157376_10140749 3300014969 Bacteria 2164
101 Ga0213874_10005303 3300021377 Bacteria 2996
102 Ga0213874_10013363 3300021377 Bacteria 2126
103 Ga0213876_10092407 3300021384 Bacteria 1603
104 Ga0213875_10024438 3300021388 Bacteria 2881
105 Ga0209677_101263 3300025253 Bacteria 11355
106 Ga0207692_10007156 3300025898 Bacteria 4559
107 Ga0207692_10042352 3300025898 Unclassified 2260
108 Ga0207692_10057708 3300025898 Bacteria 1997
109 Ga0207688_10025262 3300025901 Bacteria 3262
110 Ga0207680_10055495 3300025903 Bacteria 2388
111 Ga0207685_10047970 3300025905 Bacteria 1633
112 Ga0207699_10019772 3300025906 Bacteria 3598
113 Ga0207699_10027738 3300025906 Unclassified 3139
114 Ga0207699_10367576 3300025906 Unclassified 1019
115 Ga0207705_10310474 3300025909 Bacteria 1210
116 Ga0207684_10362464 3300025910 Bacteria 1247
117 Ga0207654_10054693 3300025911 Bacteria 2308
118 Ga0207695_10389412 3300025913 Bacteria 1279
119 Ga0207671_10127028 3300025914 Bacteria 1954
120 Ga0207693_10006514 3300025915 Bacteria 9664
121 Ga0207693_10010210 3300025915 Bacteria 7623
122 Ga0207663_10038430 3300025916 Bacteria 2893
123 Ga0207660_10456433 3300025917 Bacteria 1034
124 Ga0207646_10074378 3300025922 Bacteria 3035
125 Ga0207646_10106899 3300025922 Bacteria 2510
126 Ga0207687_10128108 3300025927 Unclassified 1909
127 Ga0207700_10017090 3300025928 Bacteria 4835
128 Ga0207664_10068102 3300025929 Bacteria 2858
129 Ga0207664_10083975 3300025929 Bacteria 2597
130 Ga0207664_10287908 3300025929 Unclassified 1443
131 Ga0207686_10461869 3300025934 Archaea 979
132 Ga0207709_10049291 3300025935 Unclassified 2570
133 Ga0207669_10685158 3300025937 Unclassified 841
134 Ga0207704_10671941 3300025938 Bacteria 855
135 Ga0207665_10061960 3300025939 Unclassified 2537
136 Ga0207691_10134221 3300025940 Bacteria 2185
137 Ga0207711_10236002 3300025941 Unclassified 1676
138 Ga0207711_10238876 3300025941 Unclassified 1666
139 Ga0207679_10071323 3300025945 Bacteria 2620
140 Ga0207667_10251015 3300025949 Bacteria 1810
141 Ga0207712_10041310 3300025961 Bacteria 3169
142 Ga0207668_10187257 3300025972 Unclassified 1637
143 Ga0207658_10427440 3300025986 Bacteria 1169
144 Ga0207677_10150306 3300026023 Unclassified 1796
145 Ga0207703_10283114 3300026035 Unclassified 1506
146 Ga0207678_10084434 3300026067 Bacteria 2716
147 Ga0207702_10092133 3300026078 Unclassified 2655
148 Ga0207702_10108644 3300026078 Bacteria 2462
149 Ga0207641_10399679 3300026088 Unclassified 1319
150 Ga0207676_10322321 3300026095 Unclassified 1419
151 Ga0207675_100096987 3300026118 Bacteria 2776
152 Ga0207675_100154786 3300026118 Unclassified 2184
153 Ga0207698_10330080 3300026142 Unclassified 1432
154 Ga0268266_10301033 3300028379 Bacteria 1496
155 Ga0373926_0024601 3300035083 Bacteria 2098
156 Ga0373934_0074614 3300035086 Unclassified 1359
157 Ga0373951_0038715 3300035091 Bacteria 1144
158 Ga0373923_0107066 3300035111 Bacteria 1238
159 Ga0373936_0038353 3300035113 Bacteria 1915
160 Ga0373941_0016056 3300035115 Bacteria 2028
161 Ga0373945_0090633 3300035116 Bacteria 1183
162 Ga0373943_0202922 3300035170 Bacteria 1098
163 Ga0373946_0115353 3300035171 Bacteria 1220
164 Ga0373931_0121125 3300035691 Bacteria 1495
165 Ga0373935_0073053 3300035692 Bacteria 2216
166 Ga0373927_0069448 3300035695 Bacteria 2280
167 Ga0373947_0000094 3300035725 Bacteria 45133
168 Ga0373947_0036328 3300035725 Bacteria 2922
169 Ga0395898_0052628 3300037466 Bacteria 3978
170 Ga0436364_0542227 3300037853 Bacteria 5024
171 Ga0436364_0721738 3300037853 Bacteria 23921
172 Ga0436364_1057598 3300037853 Unclassified 746
173 Ga0395901_0068054 3300038443 Bacteria 3710
174 Ga0436365_0037192 3300039437 Bacteria 986
175 Ga0436365_0307826 3300039437 Bacteria 5820
176 Ga0436365_0885755 3300039437 Bacteria 7193
177 Ga0436365_0899680 3300039437 Bacteria 10297
178 Ga0436365_1200935 3300039437 Unclassified 2299
179 Ga0436365_1270736 3300039437 Bacteria 1952
180 Ga0436365_1903970 3300039437 Bacteria 2447
181 Ga0436360_0123564 3300039438 Unclassified 1368
182 Ga0436360_1068038 3300039438 Unclassified 1589
183 Ga0436363_0021768 3300039450 Bacteria 2813
184 Ga0436363_0457070 3300039450 Bacteria 1955
185 Ga0436363_1206965 3300039450 Bacteria 26289
186 Ga0436362_0591879 3300039453 Bacteria 1677
187 Ga0436362_0765220 3300039453 Bacteria 2799
188 Ga0436362_1083406 3300039453 Bacteria 4664
189 Ga0451853_2384532 3300041512 Unclassified 791
190 Ga0466963_0121646 3300044694 Bacteria 1797
191 Ga0466957_0015738 3300044842 Bacteria 4419
192 Ga0466967_0027288 3300045976 Bacteria 4748
193 Ga0466967_0088071 3300045976 Bacteria 2816
194 Ga0495641_0011815 3300046461 Bacteria 4938
195 Ga0495641_0058119 3300046461 Bacteria 1751
196 Ga0495651_0024339 3300046462 Bacteria 4712
197 Ga0495582_0002571 3300046473 Bacteria 10094
198 Ga0495639_0009000 3300046475 Bacteria 4282
199 Ga0495608_0144057 3300046511 Unclassified 1520
200 Ga0495628_0129144 3300046516 Bacteria 1934
201 Ga0495666_0111646 3300046526 Bacteria 1283
202 Ga0495665_0023813 3300046531 Bacteria 3289
203 Ga0495640_0030281 3300046533 Bacteria 3876
204 Ga0495586_0031653 3300046535 Bacteria 2835
205 Ga0495667_0073571 3300046559 Unclassified 2226
206 Ga0495634_0055344 3300046642 Bacteria 2652
207 Ga0495635_0022408 3300046663 Bacteria 4398
208 Ga0495588_0086079 3300046674 Bacteria 1644
209 Ga0495613_0068764 3300046689 Bacteria 2582
210 Ga0495613_0072884 3300046689 Unclassified 2503
211 Ga0495613_0287871 3300046689 Bacteria 1140
212 Ga0495600_0141799 3300046809 Unclassified 1559
213 Ga0495581_0004947 3300047315 Bacteria 7712
214 Ga0495674_0342017 3300047319 Bacteria 1216
215 Ga0495676_0136397 3300047321 Bacteria 1764
216 Ga0495676_0219707 3300047321 Unclassified 1310
217 Ga0495676_0435692 3300047321 Bacteria 866
218 Ga0495680_0007353 3300047322 Bacteria 10122
219 Ga0495684_0495001 3300047471 Bacteria 842
220 Ga0495593_0068098 3300047673 Bacteria 1852
221 Ga0495614_0002574 3300048089 Bacteria 8067
222 Ga0496100_0065141 3300048903 Bacteria 2413
223 Ga0496101_0104562 3300048904 Bacteria 2124
224 Ga0496102_0815494 3300048905 Bacteria 855
225 Ga0496104_0014143 3300048907 Bacteria 7202
226 Ga0496104_0021640 3300048907 Bacteria 5905
227 Ga0496104_0123755 3300048907 Unclassified 2483
228 Ga0496105_0000697 3300048908 Bacteria 22678
229 Ga0496108_0022463 3300048911 Bacteria 5186
230 Ga0496108_0025206 3300048911 Bacteria 4900
231 Ga0496108_0066721 3300048911 Unclassified 3035
232 Ga0496109_0014828 3300048912 Bacteria 6783
233 Ga0496109_0097886 3300048912 Plasmid 2719
234 Ga0496109_0213659 3300048912 Unclassified 1814
235 Ga0496110_0042674 3300048913 Unclassified 3960
236 Ga0496110_0094214 3300048913 Unclassified 2681
237 Ga0496110_0098364 3300048913 Bacteria 2622
238 Ga0496110_0211369 3300048913 Bacteria 1764
239 Ga0496110_0266727 3300048913 Unclassified 1559
240 Ga0496110_0359674 3300048913 Unclassified 1326
241 Ga0496110_0405789 3300048913 Bacteria 1242
242 Ga0496111_0127450 3300048914 Unclassified 1882
243 Ga0496111_0134204 3300048914 Bacteria 1833
244 Ga0496112_0011742 3300048915 Bacteria 8020
245 Ga0496112_0015855 3300048915 Bacteria 7042
246 Ga0496112_0411592 3300048915 Unclassified 1291
247 Ga0496112_0809939 3300048915 Unclassified 861
248 Ga0496113_0006882 3300048916 Bacteria 7256
249 Ga0496113_0026221 3300048916 Bacteria 4164
250 Ga0496113_0642621 3300048916 Bacteria 849
251 Ga0496114_0037141 3300048917 Unclassified 4029
252 Ga0496114_0125193 3300048917 Unclassified 2215
253 Ga0496114_0197746 3300048917 Bacteria 1760
254 Ga0496114_0675184 3300048917 Bacteria 907
255 nmdc:mga0yw44_50842_c1 3300050492 Bacteria 2507
256 nmdc:mga0sz30_50092_c1 3300050516 Bacteria 1770
257 Ga0495601_0030793 3300053077 Bacteria 3333
258 Ga0495601_0217813 3300053077 Unclassified 1247
259 Ga0495619_0121071 3300053085 Unclassified 1794
260 Ga0466962_0054366 3300061719 Bacteria 1913
261 2919526007 2919523602 Bacteria 3788128
262 Ga0436364_0084952
263 rootL2_10245311
264 Ga0070658_10373248
265 Ga0070683_100089233
266 Ga0070666_10109136
267 Ga0070680_100331548
268 Ga0070682_100065638
269 Ga0070682_100166097
270 Ga0070691_10111675
271 Ga0070674_100190026
272 Ga0070667_100182525
273 Ga0070667_100949161
274 Ga0070709_10022022
275 Ga0070709_10299555
276 Ga0070714_100041285
277 Ga0070714_100103230
278 Ga0070714_100282583
279 Ga0070713_100035430
280 Ga0070713_100044803
281 Ga0070713_100204502
282 Ga0070710_10006900
283 Ga0070710_10011144
284 Ga0070711_100020551
285 Ga0070700_100710490
286 Ga0070708_100122921
287 Ga0070663_100012945
288 Ga0070678_100087448
289 Ga0070662_100134658
290 Ga0070681_10401273
291 Ga0070706_100007106
292 Ga0070706_100069786
293 Ga0070707_100007126
294 Ga0070707_100081879
295 Ga0070707_100102660
296 Ga0070707_100188595
297 Ga0070698_100012534
298 Ga0070698_100113985
299 Ga0070698_100272776
300 Ga0070699_100019507
301 Ga0070684_100459047
302 Ga0070697_100023983
303 Ga0070697_100295901
304 Ga0070672_100498461
305 Ga0070686_100132554
306 Ga0070695_100024225
307 Ga0070665_100185832
308 Ga0070665_100382683
309 Ga0068855_100071081
310 Ga0070664_100022424
311 Ga0070664_100498306
312 Ga0068857_100070298
313 Ga0068857_100388296
314 Ga0068856_100052013
315 Ga0070702_100106469
316 Ga0068852_100446608
317 Ga0068864_100123060
318 Ga0068864_100179082
319 Ga0068861_100064531
320 Ga0068861_100070991
321 Ga0068863_100252230
322 Ga0068858_100316154
323 Ga0068860_100545576
324 Ga0070717_10015299
325 Ga0070717_10019721
326 Ga0070717_10476168
327 Ga0070715_10042958
328 Ga0070715_10065472
329 Ga0070716_100074094
330 Ga0070712_100012849
331 Ga0070712_100017729
332 Ga0068871_100179709
333 Ga0068871_100674834
334 Ga0068865_100949588
335 Ga0099794_10236421
336 Ga0105240_10051868
337 Ga0105240_10489249
338 Ga0105245_10079704
339 Ga0105245_10155039
340 Ga0105245_10552908
341 Ga0105247_10122302
342 Ga0105243_10048442
343 Ga0105248_10117238
344 Ga0105248_10237110
345 Ga0105249_10042844
346 Ga0105249_10076937
347 Ga0105239_10145639
348 Ga0157370_10473874
349 Ga0157369_10111988
350 Ga0157369_10243103
351 Ga0157369_10702196
352 Ga0163162_10072050
353 Ga0157372_10145895
354 Ga0157372_10254562
355 Ga0157375_10041160
356 Ga0157375_10424150
357 Ga0163163_10024542
358 Ga0157380_10074182
359 Ga0157379_10050810
360 Ga0157376_10049512
361 Ga0157376_10140749
362 Ga0213874_10005303
363 Ga0213874_10013363
364 Ga0213876_10092407
365 Ga0213875_10024438
366 Ga0209677_101263
367 Ga0207692_10007156
368 Ga0207692_10042352
369 Ga0207692_10057708
370 Ga0207688_10025262
371 Ga0207680_10055495
372 Ga0207685_10047970
373 Ga0207699_10019772
374 Ga0207699_10027738
375 Ga0207699_10367576
376 Ga0207705_10310474
377 Ga0207684_10362464
378 Ga0207654_10054693
379 Ga0207695_10389412
380 Ga0207671_10127028
381 Ga0207693_10006514
382 Ga0207693_10010210
383 Ga0207663_10038430
384 Ga0207660_10456433
385 Ga0207646_10074378
386 Ga0207646_10106899
387 Ga0207687_10128108
388 Ga0207700_10017090
389 Ga0207664_10068102
390 Ga0207664_10083975
391 Ga0207664_10287908
392 Ga0207686_10461869
393 Ga0207709_10049291
394 Ga0207669_10685158
395 Ga0207704_10671941
396 Ga0207665_10061960
397 Ga0207691_10134221
398 Ga0207711_10236002
399 Ga0207711_10238876
400 Ga0207679_10071323
401 Ga0207667_10251015
402 Ga0207712_10041310
403 Ga0207668_10187257
404 Ga0207658_10427440
405 Ga0207677_10150306
406 Ga0207703_10283114
407 Ga0207678_10084434
408 Ga0207702_10092133
409 Ga0207702_10108644
410 Ga0207641_10399679
411 Ga0207676_10322321
412 Ga0207675_100096987
413 Ga0207675_100154786
414 Ga0207698_10330080
415 Ga0268266_10301033
416 Ga0373926_0024601
417 Ga0373934_0074614
418 Ga0373951_0038715
419 Ga0373923_0107066
420 Ga0373936_0038353
421 Ga0373941_0016056
422 Ga0373945_0090633
423 Ga0373943_0202922
424 Ga0373946_0115353
425 Ga0373931_0121125
426 Ga0373935_0073053
427 Ga0373927_0069448
428 Ga0373947_0000094
429 Ga0373947_0036328
430 Ga0395898_0052628
431 Ga0436364_0542227
432 Ga0436364_0721738
433 Ga0436364_1057598
434 Ga0395901_0068054
435 Ga0436365_0037192
436 Ga0436365_0307826
437 Ga0436365_0885755
438 Ga0436365_0899680
439 Ga0436365_1200935
440 Ga0436365_1270736
441 Ga0436365_1903970
442 Ga0436360_0123564
443 Ga0436360_1068038
444 Ga0436363_0021768
445 Ga0436363_0457070
446 Ga0436363_1206965
447 Ga0436362_0591879
448 Ga0436362_0765220
449 Ga0436362_1083406
450 Ga0451853_2384532
451 Ga0466963_0121646
452 Ga0466957_0015738
453 Ga0466967_0027288
454 Ga0466967_0088071
455 Ga0495641_0011815
456 Ga0495641_0058119
457 Ga0495651_0024339
458 Ga0495582_0002571
459 Ga0495639_0009000
460 Ga0495608_0144057
461 Ga0495628_0129144
462 Ga0495666_0111646
463 Ga0495665_0023813
464 Ga0495640_0030281
465 Ga0495586_0031653
466 Ga0495667_0073571
467 Ga0495634_0055344
468 Ga0495635_0022408
469 Ga0495588_0086079
470 Ga0495613_0068764
471 Ga0495613_0072884
472 Ga0495613_0287871
473 Ga0495600_0141799
474 Ga0495581_0004947
475 Ga0495674_0342017
476 Ga0495676_0136397
477 Ga0495676_0219707
478 Ga0495676_0435692
479 Ga0495680_0007353
480 Ga0495684_0495001
481 Ga0495593_0068098
482 Ga0495614_0002574
483 Ga0496100_0065141
484 Ga0496101_0104562
485 Ga0496102_0815494
486 Ga0496104_0014143
487 Ga0496104_0021640
488 Ga0496104_0123755
489 Ga0496105_0000697
490 Ga0496108_0022463
491 Ga0496108_0025206
492 Ga0496108_0066721
493 Ga0496109_0014828
494 Ga0496109_0097886
495 Ga0496109_0213659
496 Ga0496110_0042674
497 Ga0496110_0094214
498 Ga0496110_0098364
499 Ga0496110_0211369
500 Ga0496110_0266727
501 Ga0496110_0359674
502 Ga0496110_0405789
503 Ga0496111_0127450
504 Ga0496111_0134204
505 Ga0496112_0011742
506 Ga0496112_0015855
507 Ga0496112_0411592
508 Ga0496112_0809939
509 Ga0496113_0006882
510 Ga0496113_0026221
511 Ga0496113_0642621
512 Ga0496114_0037141
513 Ga0496114_0125193
514 Ga0496114_0197746
515 Ga0496114_0675184
516 nmdc:mga0yw44_50842_c1
517 nmdc:mga0sz30_50092_c1
518 Ga0495601_0030793
519 Ga0495601_0217813
520 Ga0495619_0121071
521 Ga0466962_0054366
522 2919526007

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

46

92

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lwj-assembly1.cif.gz_A-2 crystal structure of putative tetr-family transcriptional regulator (yp_752756.1) from syntrophomonas wolfei str. goettingen at 2.07 a resolution 0.8294 19 208
5gpa-assembly1.cif.gz_A structural analysis of fatty acid degradation regulator fadr from bacillus halodurans 0.8127 24 206
3lwj-assembly1.cif.gz_A-2 crystal structure of putative tetr-family transcriptional regulator (yp_752756.1) from syntrophomonas wolfei str. goettingen at 2.07 a resolution 0.788 19 208
5gpa-assembly1.cif.gz_B structural analysis of fatty acid degradation regulator fadr from bacillus halodurans 0.7831 24 206
5gpc-assembly1.cif.gz_B structural analysis of fatty acid degradation regulator fadr from bacillus halodurans 0.7731 22 212
ID Description Score Start End Superfamily
2wv1B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9936 19 64 1.10.10.60
2jk3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9863 20 64 1.10.10.60
6mj1A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9859 22 64 1.10.10.60
2of7A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9828 15 62 1.10.10.60
2id6A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9815 22 64 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A535NWR4-F1-model_v4 Helix-turn-helix transcriptional regulator 0.9855 29 195 GO:0000976
GO:0003700
AF-A0A4Q8URA2-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9842 25 212 GO:0000976
GO:0003700
AF-A0A2A3FTA7-F1-model_v4 TetR family transcriptional regulator 0.9728 98 213
AF-A0A561T521-F1-model_v4 TetR family transcriptional regulator 0.9705 112 212
AF-A0A7Y5KNA0-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9695 41 212 GO:0003677
GO:0006355

Map