F370296

General Info

Members Datasets Scaffolds Average Seq Length
261 177 522 293

Family's Representative Sequence

Representative Sequence 3300009098|Ga0105245_10045321|Ga0105245_100453214
Length 328
Sequence MEPGRVTRARRAPADKLQTQEKAHMLVKDSRSTAPPGGPMLSNREVEQYRDLGYLVVPDVLDAPLLAELRRTVDGIVTDAAKVATHTDVYDLEDSHTAENPRVRRIKTPHKHFPFFAQLIRNPRITAIMAQLLGPDIRLHGSKLNMKSAGYGAAVEWHQDWAFYPHTNDDVLATGLYLDDCGLENGPLLVVPGTHKGPVYDHHTDGYFVGAMNPEIEGLDYSKAVPLMGKAGSMTIHHVRLVHGSALNTSAQPRRLLLHEYVAADAWPLMGVSNFEEFNSRVVLGKPTIEPRLSSVPVRMPLPPAPFQGSIYENQRTAAKRFFAKAAA

Samples

Sample ID Description Type Environment
1 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
65 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
66 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
67 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
69 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
71 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
72 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
73 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
76 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
97 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
104 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
105 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
106 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
116 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
117 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
118 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
119 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
120 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
121 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
122 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
123 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
124 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
125 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
126 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
127 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
128 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
129 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
130 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
131 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
132 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
133 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
134 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
138 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
149 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
150 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
151 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
152 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
153 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
154 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
158 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
169 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
170 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
171 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
172 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
173 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
174 3300059478 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 58R_AW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
175 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
176 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
177 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.85
Metatranscriptomes 0.77
Isolates 0.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.75
Nodule 0
Rhizoplane 5.36
Rhizosphere 82.76
Stem 0
Stem Tuber 0
Unclassified 4.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105245_10045321 3300009098 Bacteria 3927
2 JGI25156J39149_1000367 3300002705 Bacteria 28987
3 JGI25156J39149_1000836 3300002705 Bacteria 15553
4 JGI25154J39366_1000243 3300002738 Bacteria 35627
5 JGI25157J39369_1000548 3300002741 Bacteria 22468
6 Ga0055532_1000077 3300003758 Bacteria 122193
7 Ga0070683_100093272 3300005329 Bacteria 2828
8 Ga0070670_100022586 3300005331 Bacteria 5413
9 Ga0068868_100077519 3300005338 Bacteria 2659
10 Ga0070689_100045262 3300005340 Bacteria 3388
11 Ga0070661_100224437 3300005344 Bacteria 1442
12 Ga0070671_100014971 3300005355 Bacteria 6263
13 Ga0070674_100213810 3300005356 Bacteria 1496
14 Ga0070673_100026005 3300005364 Bacteria 4316
15 Ga0070673_100612576 3300005364 Bacteria 994
16 Ga0070659_100161599 3300005366 Bacteria 1832
17 Ga0070709_10224816 3300005434 Bacteria 1340
18 Ga0070711_100104140 3300005439 Bacteria 2070
19 Ga0070662_100186652 3300005457 Bacteria 1637
20 Ga0070681_10170862 3300005458 Bacteria 2096
21 Ga0070685_10103757 3300005466 Bacteria 1740
22 Ga0070706_100387447 3300005467 Bacteria 1301
23 Ga0070684_100008746 3300005535 Bacteria 7939
24 Ga0068853_100214712 3300005539 Bacteria 1755
25 Ga0070672_100167624 3300005543 Bacteria 1825
26 Ga0070693_100165568 3300005547 Bacteria 1412
27 Ga0070665_100013599 3300005548 Bacteria 8186
28 Ga0070665_100044019 3300005548 Bacteria 4484
29 Ga0070665_100088271 3300005548 Bacteria 3107
30 Ga0070704_100228385 3300005549 Bacteria 1517
31 Ga0068855_100096443 3300005563 Bacteria 3407
32 Ga0070664_100338745 3300005564 Bacteria 1366
33 Ga0068857_100191125 3300005577 Bacteria 1865
34 Ga0068856_100059891 3300005614 Bacteria 3761
35 Ga0068856_100240064 3300005614 Bacteria 1827
36 Ga0068852_100017401 3300005616 Bacteria 5639
37 Ga0068859_100234950 3300005617 Bacteria 1922
38 Ga0068859_100346949 3300005617 Bacteria 1579
39 Ga0068859_100411323 3300005617 Bacteria 1449
40 Ga0068864_100130333 3300005618 Bacteria 2258
41 Ga0068864_100377916 3300005618 Bacteria 1342
42 Ga0068858_100288021 3300005842 Bacteria 1565
43 Ga0068860_100377952 3300005843 Bacteria 1398
44 Ga0081539_10060082 3300005985 Bacteria 2089
45 Ga0070717_10119227 3300006028 Bacteria 2259
46 Ga0070715_10070756 3300006163 Bacteria 1558
47 Ga0075367_10211206 3300006178 Bacteria 1214
48 Ga0075369_10038606 3300006186 Bacteria 2038
49 Ga0075366_10020168 3300006195 Bacteria 3864
50 Ga0075366_10059090 3300006195 Bacteria 2278
51 Ga0075428_100033532 3300006844 Bacteria 5669
52 Ga0075430_100002884 3300006846 Bacteria 14397
53 Ga0075430_100005788 3300006846 Bacteria 10427
54 Ga0075431_100006158 3300006847 Bacteria 11901
55 Ga0075431_100008175 3300006847 Bacteria 10452
56 Ga0075431_100009286 3300006847 Bacteria 9866
57 Ga0075431_100081073 3300006847 Bacteria 3350
58 Ga0075431_100112648 3300006847 Bacteria 2808
59 Ga0075431_100435591 3300006847 Bacteria 1308
60 Ga0075434_100027347 3300006871 Bacteria 5600
61 Ga0075429_100000439 3300006880 Bacteria 30919
62 Ga0075429_100002059 3300006880 Bacteria 16755
63 Ga0075429_100021611 3300006880 Bacteria 5578
64 Ga0075436_100083252 3300006914 Bacteria 2220
65 Ga0097620_100234938 3300006931 Bacteria 1922
66 Ga0097620_100346982 3300006931 Bacteria 1579
67 Ga0097620_100411325 3300006931 Bacteria 1449
68 Ga0111539_10134561 3300009094 Unclassified 2894
69 Ga0111539_10222242 3300009094 Bacteria 2200
70 Ga0105245_10189591 3300009098 Bacteria 1969
71 Ga0114129_10001710 3300009147 Bacteria 29947
72 Ga0114129_10032647 3300009147 Bacteria 7356
73 Ga0114129_10037066 3300009147 Bacteria 6885
74 Ga0114129_10060788 3300009147 Bacteria 5282
75 Ga0114129_10090823 3300009147 Bacteria 4233
76 Ga0114129_10105474 3300009147 Bacteria 3895
77 Ga0114129_10998394 3300009147 Bacteria 1054
78 Ga0114129_11357261 3300009147 Bacteria 879
79 Ga0105242_10290111 3300009176 Bacteria 1489
80 Ga0105237_10010747 3300009545 Bacteria 9713
81 Ga0105237_10383884 3300009545 Bacteria 1410
82 Ga0105239_10338408 3300010375 Bacteria 1698
83 Ga0105239_10456291 3300010375 Unclassified 1450
84 Ga0105246_10229721 3300011119 Bacteria 1460
85 Ga0157374_10158131 3300013296 Bacteria 2206
86 Ga0157374_10357999 3300013296 Bacteria 1451
87 Ga0157378_10318423 3300013297 Bacteria 1510
88 Ga0163162_10159279 3300013306 Bacteria 2379
89 Ga0163162_10683410 3300013306 Bacteria 1149
90 Ga0157372_10180583 3300013307 Bacteria 2443
91 Ga0163163_10099078 3300014325 Bacteria 2936
92 Ga0157380_10166598 3300014326 Bacteria 1921
93 Ga0157380_10252136 3300014326 Bacteria 1598
94 Ga0157379_10124054 3300014968 Bacteria 2324
95 Ga0157376_10375827 3300014969 Bacteria 1367
96 Ga0206353_11101352 3300020082 Bacteria 2006
97 Ga0213876_10070927 3300021384 Bacteria 1840
98 Ga0213875_10000033 3300021388 Bacteria 170944
99 Ga0209435_100048 3300025206 Bacteria 92746
100 Ga0209147_100122 3300025229 Bacteria 138553
101 Ga0209437_100081 3300025233 Bacteria 271072
102 Ga0209258_100230 3300025242 Bacteria 104468
103 Ga0209646_1000297 3300025246 Bacteria 41195
104 Ga0209026_1000126 3300025250 Bacteria 122422
105 Ga0209759_1000523 3300025256 Bacteria 41195
106 Ga0209455_1004360 3300025272 Bacteria 4665
107 Ga0209130_1000947 3300025284 Bacteria 23051
108 Ga0207426_1000046 3300025302 Bacteria 422271
109 Ga0207699_10069240 3300025906 Bacteria 2151
110 Ga0207707_10139930 3300025912 Bacteria 2116
111 Ga0207695_10233649 3300025913 Bacteria 1742
112 Ga0207671_10008421 3300025914 Bacteria 8749
113 Ga0207681_10347148 3300025923 Bacteria 1187
114 Ga0207650_10010336 3300025925 Bacteria 6399
115 Ga0207650_10186833 3300025925 Bacteria 1654
116 Ga0207687_10119416 3300025927 Bacteria 1969
117 Ga0207644_10081053 3300025931 Bacteria 2397
118 Ga0207690_10055907 3300025932 Bacteria 2660
119 Ga0207706_10187850 3300025933 Bacteria 1814
120 Ga0207706_10212973 3300025933 Bacteria 1693
121 Ga0207686_10324644 3300025934 Bacteria 1151
122 Ga0207691_10091986 3300025940 Bacteria 2717
123 Ga0207679_10320158 3300025945 Bacteria 1343
124 Ga0207667_10095627 3300025949 Bacteria 3066
125 Ga0207651_10009184 3300025960 Bacteria 5391
126 Ga0207651_10128908 3300025960 Bacteria 1933
127 Ga0207703_10451741 3300026035 Bacteria 1200
128 Ga0207639_10340789 3300026041 Bacteria 1336
129 Ga0207708_10041874 3300026075 Bacteria 3491
130 Ga0207676_10229593 3300026095 Bacteria 1658
131 Ga0207674_10107525 3300026116 Bacteria 2766
132 Ga0207428_10077385 3300027907 Unclassified 2604
133 Ga0268266_10025681 3300028379 Bacteria 5012
134 Ga0268266_10139925 3300028379 Bacteria 2171
135 Ga0268265_10096927 3300028380 Bacteria 2372
136 Ga0307408_100023585 3300031548 Bacteria 4193
137 Ga0307410_10239486 3300031852 Unclassified 1405
138 Ga0307409_100838770 3300031995 Bacteria 929
139 Ga0307416_100148886 3300032002 Bacteria 2143
140 Ga0307411_10276025 3300032005 Unclassified 1335
141 Ga0373944_0044185 3300035089 Bacteria 1387
142 Ga0373943_0111828 3300035170 Bacteria 1442
143 Ga0373931_0172934 3300035691 Bacteria 1274
144 Ga0373937_0160159 3300036401 Bacteria 2110
145 Ga0316584_0042991 3300036712 Bacteria 3368
146 Ga0395900_0052386 3300037418 Bacteria 4201
147 Ga0395900_0071665 3300037418 Bacteria 3562
148 Ga0395898_0044346 3300037466 Bacteria 4378
149 Ga0395905_0042109 3300037471 Bacteria 4285
150 Ga0436364_1338082 3300037853 Bacteria 27858
151 Ga0436364_1382546 3300037853 Bacteria 1216
152 Ga0395901_0020341 3300038443 Bacteria 6795
153 Ga0395901_0071957 3300038443 Bacteria 3603
154 Ga0436365_1029053 3300039437 Bacteria 1974
155 Ga0450907_007992 3300042146 Bacteria 1762
156 Ga0439435_0073103 3300042436 Bacteria 1018
157 Ga0439459_0007047 3300042438 Bacteria 1889
158 Ga0466963_0051830 3300044694 Bacteria 2721
159 Ga0466964_0039078 3300044706 Bacteria 1910
160 Ga0466967_0096739 3300045976 Bacteria 2693
161 Ga0466967_0158871 3300045976 Bacteria 2120
162 Ga0495592_0015196 3300046454 Bacteria 5847
163 Ga0495629_0166759 3300046459 Bacteria 1529
164 Ga0495653_0285241 3300046463 Unclassified 1082
165 Ga0495608_0010561 3300046511 Bacteria 6443
166 Ga0495628_0068364 3300046516 Bacteria 2772
167 Ga0495652_0072458 3300046529 Bacteria 2871
168 Ga0495640_0056710 3300046533 Bacteria 2675
169 Ga0495667_0245838 3300046559 Bacteria 1139
170 Ga0495675_0072361 3300047444 Bacteria 2175
171 Ga0496102_0036066 3300048905 Bacteria 4454
172 Ga0496102_0145826 3300048905 Bacteria 2222
173 Ga0496102_0292005 3300048905 Bacteria 1537
174 Ga0496104_0048411 3300048907 Bacteria 4008
175 Ga0496104_0782901 3300048907 Bacteria 860
176 Ga0496105_0137370 3300048908 Bacteria 2013
177 Ga0496105_0371829 3300048908 Bacteria 1139
178 Ga0496106_0364600 3300048909 Bacteria 1161
179 Ga0496108_0258405 3300048911 Bacteria 1516
180 Ga0496112_0030620 3300048915 Bacteria 5210
181 Ga0496112_0514537 3300048915 Unclassified 1132
182 Ga0496113_0374856 3300048916 Unclassified 1142
183 Ga0496115_0003900 3300048918 Bacteria 10747
184 Ga0496115_0111275 3300048918 Bacteria 2250
185 Ga0496120_0049655 3300048923 Bacteria 2407
186 Ga0496125_0001410 3300048928 Bacteria 35083
187 Ga0501034_0004474 3300049571 Bacteria 15540
188 Ga0501034_0086915 3300049571 Bacteria 3127
189 Ga0501034_0378163 3300049571 Bacteria 1341
190 Ga0501036_0001665 3300049572 Bacteria 17224
191 Ga0501036_0142038 3300049572 Bacteria 2026
192 Ga0501038_0001821 3300049574 Bacteria 19748
193 Ga0501041_0000145 3300049577 Bacteria 31208
194 Ga0501042_0000144 3300049578 Bacteria 31606
195 Ga0501043_0043449 3300049579 Bacteria 3532
196 Ga0501043_0183882 3300049579 Bacteria 1628
197 Ga0501046_0000886 3300049580 Bacteria 29142
198 Ga0501046_0264366 3300049580 Unclassified 1263
199 Ga0501047_0377049 3300049581 Bacteria 1253
200 Ga0501068_0006146 3300049584 Bacteria 6606
201 Ga0501068_0038563 3300049584 Bacteria 2863
202 Ga0501071_0000340 3300049587 Bacteria 22663
203 Ga0501071_0074188 3300049587 Bacteria 2483
204 Ga0501071_0392943 3300049587 Unclassified 1058
205 Ga0501072_0001951 3300049588 Bacteria 15365
206 Ga0501072_0008642 3300049588 Bacteria 7731
207 Ga0501074_0274130 3300049590 Bacteria 1199
208 Ga0501075_0002321 3300049591 Bacteria 12627
209 Ga0501075_0035627 3300049591 Bacteria 3712
210 Ga0501076_0000238 3300049592 Bacteria 33689
211 Ga0501076_0199703 3300049592 Bacteria 1633
212 Ga0501077_0015648 3300049593 Bacteria 4777
213 Ga0501077_0082369 3300049593 Bacteria 2039
214 Ga0501079_0000103 3300049741 Bacteria 43079
215 Ga0501079_0036174 3300049741 Bacteria 3803
216 Ga0501079_0088200 3300049741 Bacteria 2402
217 Ga0501080_0008867 3300049742 Bacteria 9144
218 Ga0501080_0227175 3300049742 Bacteria 1707
219 Ga0501080_0347260 3300049742 Unclassified 1340
220 Ga0501081_0000258 3300049743 Bacteria 27526
221 Ga0501081_0005332 3300049743 Bacteria 8294
222 Ga0501081_0232445 3300049743 Unclassified 1343
223 Ga0501081_0421921 3300049743 Bacteria 989
224 Ga0501083_0019989 3300049744 Bacteria 4661
225 Ga0501035_0079323 3300049822 Bacteria 2900
226 Ga0501044_0255942 3300049823 Bacteria 1690
227 Ga0501045_0000109 3300049824 Bacteria 41385
228 nmdc:mga05p37_16691_c1 3300050507 Bacteria 8847
229 nmdc:mga05p37_2937_c1 3300050507 Bacteria 19785
230 nmdc:mga05p37_30691_c1 3300050507 Bacteria 6559
231 nmdc:mga05p37_43378_c1 3300050507 Bacteria 2219
232 nmdc:mga05p37_47644_c1 3300050507 Bacteria 5270
233 nmdc:mga09592_213_c1 3300050508 Bacteria 41780
234 nmdc:mga09592_4027_c1 3300050508 Bacteria 11858
235 nmdc:mga0qj67_25658_c1 3300050509 Bacteria 4555
236 nmdc:mga0qj67_35585_c1 3300050509 Bacteria 3894
237 nmdc:mga06r32_12144_c1 3300050510 Bacteria 7771
238 nmdc:mga06r32_205998_c1 3300050510 Bacteria 1955
239 nmdc:mga06r32_227043_c1 3300050510 Bacteria 1855
240 nmdc:mga06r32_41146_c1 3300050510 Bacteria 4390
241 nmdc:mga06r32_421453_c1 3300050510 Bacteria 1316
242 nmdc:mga06r32_91360_c1 3300050510 Bacteria 2975
243 nmdc:mga08y16_202208_c1 3300050511 Bacteria 2058
244 nmdc:mga08y16_209027_c1 3300050511 Bacteria 2021
245 nmdc:mga08y16_316758_c1 3300050511 Bacteria 1606
246 nmdc:mga08y16_39136_c1 3300050511 Bacteria 4975
247 nmdc:mga0n895_167219_c1 3300050512 Bacteria 2231
248 nmdc:mga0a205_96932_c1 3300050515 Bacteria 2848
249 nmdc:mga0sz30_32140_c1 3300050516 Bacteria 2175
250 Ga0495612_0063104 3300053078 Bacteria 1536
251 Ga0500642_0001905 3300053130 Bacteria 6031
252 Ga0500616_0000824 3300053153 Bacteria 35140
253 Ga0500616_0054563 3300053153 Bacteria 2093
254 Ga0501084_0016769 3300054114 Bacteria 6085
255 Ga0501084_0042923 3300054114 Bacteria 3783
256 Ga0587093_013918 3300059478 Bacteria 996
257 Ga0501082_0000047 3300060353 Bacteria 86072
258 Ga0530510_0000144 3300061734 Bacteria 41986
259 Ga0530510_0001524 3300061734 Bacteria 15605
260 Ga0530510_0280190 3300061734 Bacteria 1245
261 2819595024 2818991445 Bacteria 4955017
262 Ga0105245_10045321
263 JGI25156J39149_1000367
264 JGI25156J39149_1000836
265 JGI25154J39366_1000243
266 JGI25157J39369_1000548
267 Ga0055532_1000077
268 Ga0070683_100093272
269 Ga0070670_100022586
270 Ga0068868_100077519
271 Ga0070689_100045262
272 Ga0070661_100224437
273 Ga0070671_100014971
274 Ga0070674_100213810
275 Ga0070673_100026005
276 Ga0070673_100612576
277 Ga0070659_100161599
278 Ga0070709_10224816
279 Ga0070711_100104140
280 Ga0070662_100186652
281 Ga0070681_10170862
282 Ga0070685_10103757
283 Ga0070706_100387447
284 Ga0070684_100008746
285 Ga0068853_100214712
286 Ga0070672_100167624
287 Ga0070693_100165568
288 Ga0070665_100013599
289 Ga0070665_100044019
290 Ga0070665_100088271
291 Ga0070704_100228385
292 Ga0068855_100096443
293 Ga0070664_100338745
294 Ga0068857_100191125
295 Ga0068856_100059891
296 Ga0068856_100240064
297 Ga0068852_100017401
298 Ga0068859_100234950
299 Ga0068859_100346949
300 Ga0068859_100411323
301 Ga0068864_100130333
302 Ga0068864_100377916
303 Ga0068858_100288021
304 Ga0068860_100377952
305 Ga0081539_10060082
306 Ga0070717_10119227
307 Ga0070715_10070756
308 Ga0075367_10211206
309 Ga0075369_10038606
310 Ga0075366_10020168
311 Ga0075366_10059090
312 Ga0075428_100033532
313 Ga0075430_100002884
314 Ga0075430_100005788
315 Ga0075431_100006158
316 Ga0075431_100008175
317 Ga0075431_100009286
318 Ga0075431_100081073
319 Ga0075431_100112648
320 Ga0075431_100435591
321 Ga0075434_100027347
322 Ga0075429_100000439
323 Ga0075429_100002059
324 Ga0075429_100021611
325 Ga0075436_100083252
326 Ga0097620_100234938
327 Ga0097620_100346982
328 Ga0097620_100411325
329 Ga0111539_10134561
330 Ga0111539_10222242
331 Ga0105245_10189591
332 Ga0114129_10001710
333 Ga0114129_10032647
334 Ga0114129_10037066
335 Ga0114129_10060788
336 Ga0114129_10090823
337 Ga0114129_10105474
338 Ga0114129_10998394
339 Ga0114129_11357261
340 Ga0105242_10290111
341 Ga0105237_10010747
342 Ga0105237_10383884
343 Ga0105239_10338408
344 Ga0105239_10456291
345 Ga0105246_10229721
346 Ga0157374_10158131
347 Ga0157374_10357999
348 Ga0157378_10318423
349 Ga0163162_10159279
350 Ga0163162_10683410
351 Ga0157372_10180583
352 Ga0163163_10099078
353 Ga0157380_10166598
354 Ga0157380_10252136
355 Ga0157379_10124054
356 Ga0157376_10375827
357 Ga0206353_11101352
358 Ga0213876_10070927
359 Ga0213875_10000033
360 Ga0209435_100048
361 Ga0209147_100122
362 Ga0209437_100081
363 Ga0209258_100230
364 Ga0209646_1000297
365 Ga0209026_1000126
366 Ga0209759_1000523
367 Ga0209455_1004360
368 Ga0209130_1000947
369 Ga0207426_1000046
370 Ga0207699_10069240
371 Ga0207707_10139930
372 Ga0207695_10233649
373 Ga0207671_10008421
374 Ga0207681_10347148
375 Ga0207650_10010336
376 Ga0207650_10186833
377 Ga0207687_10119416
378 Ga0207644_10081053
379 Ga0207690_10055907
380 Ga0207706_10187850
381 Ga0207706_10212973
382 Ga0207686_10324644
383 Ga0207691_10091986
384 Ga0207679_10320158
385 Ga0207667_10095627
386 Ga0207651_10009184
387 Ga0207651_10128908
388 Ga0207703_10451741
389 Ga0207639_10340789
390 Ga0207708_10041874
391 Ga0207676_10229593
392 Ga0207674_10107525
393 Ga0207428_10077385
394 Ga0268266_10025681
395 Ga0268266_10139925
396 Ga0268265_10096927
397 Ga0307408_100023585
398 Ga0307410_10239486
399 Ga0307409_100838770
400 Ga0307416_100148886
401 Ga0307411_10276025
402 Ga0373944_0044185
403 Ga0373943_0111828
404 Ga0373931_0172934
405 Ga0373937_0160159
406 Ga0316584_0042991
407 Ga0395900_0052386
408 Ga0395900_0071665
409 Ga0395898_0044346
410 Ga0395905_0042109
411 Ga0436364_1338082
412 Ga0436364_1382546
413 Ga0395901_0020341
414 Ga0395901_0071957
415 Ga0436365_1029053
416 Ga0450907_007992
417 Ga0439435_0073103
418 Ga0439459_0007047
419 Ga0466963_0051830
420 Ga0466964_0039078
421 Ga0466967_0096739
422 Ga0466967_0158871
423 Ga0495592_0015196
424 Ga0495629_0166759
425 Ga0495653_0285241
426 Ga0495608_0010561
427 Ga0495628_0068364
428 Ga0495652_0072458
429 Ga0495640_0056710
430 Ga0495667_0245838
431 Ga0495675_0072361
432 Ga0496102_0036066
433 Ga0496102_0145826
434 Ga0496102_0292005
435 Ga0496104_0048411
436 Ga0496104_0782901
437 Ga0496105_0137370
438 Ga0496105_0371829
439 Ga0496106_0364600
440 Ga0496108_0258405
441 Ga0496112_0030620
442 Ga0496112_0514537
443 Ga0496113_0374856
444 Ga0496115_0003900
445 Ga0496115_0111275
446 Ga0496120_0049655
447 Ga0496125_0001410
448 Ga0501034_0004474
449 Ga0501034_0086915
450 Ga0501034_0378163
451 Ga0501036_0001665
452 Ga0501036_0142038
453 Ga0501038_0001821
454 Ga0501041_0000145
455 Ga0501042_0000144
456 Ga0501043_0043449
457 Ga0501043_0183882
458 Ga0501046_0000886
459 Ga0501046_0264366
460 Ga0501047_0377049
461 Ga0501068_0006146
462 Ga0501068_0038563
463 Ga0501071_0000340
464 Ga0501071_0074188
465 Ga0501071_0392943
466 Ga0501072_0001951
467 Ga0501072_0008642
468 Ga0501074_0274130
469 Ga0501075_0002321
470 Ga0501075_0035627
471 Ga0501076_0000238
472 Ga0501076_0199703
473 Ga0501077_0015648
474 Ga0501077_0082369
475 Ga0501079_0000103
476 Ga0501079_0036174
477 Ga0501079_0088200
478 Ga0501080_0008867
479 Ga0501080_0227175
480 Ga0501080_0347260
481 Ga0501081_0000258
482 Ga0501081_0005332
483 Ga0501081_0232445
484 Ga0501081_0421921
485 Ga0501083_0019989
486 Ga0501035_0079323
487 Ga0501044_0255942
488 Ga0501045_0000109
489 nmdc:mga05p37_16691_c1
490 nmdc:mga05p37_2937_c1
491 nmdc:mga05p37_30691_c1
492 nmdc:mga05p37_43378_c1
493 nmdc:mga05p37_47644_c1
494 nmdc:mga09592_213_c1
495 nmdc:mga09592_4027_c1
496 nmdc:mga0qj67_25658_c1
497 nmdc:mga0qj67_35585_c1
498 nmdc:mga06r32_12144_c1
499 nmdc:mga06r32_205998_c1
500 nmdc:mga06r32_227043_c1
501 nmdc:mga06r32_41146_c1
502 nmdc:mga06r32_421453_c1
503 nmdc:mga06r32_91360_c1
504 nmdc:mga08y16_202208_c1
505 nmdc:mga08y16_209027_c1
506 nmdc:mga08y16_316758_c1
507 nmdc:mga08y16_39136_c1
508 nmdc:mga0n895_167219_c1
509 nmdc:mga0a205_96932_c1
510 nmdc:mga0sz30_32140_c1
511 Ga0495612_0063104
512 Ga0500642_0001905
513 Ga0500616_0000824
514 Ga0500616_0054563
515 Ga0501084_0016769
516 Ga0501084_0042923
517 Ga0587093_013918
518 Ga0501082_0000047
519 Ga0530510_0000144
520 Ga0530510_0001524
521 Ga0530510_0280190
522 2819595024

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05721

PhyH

Phytanoyl-CoA dioxygenase (PhyH)

49

256

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
7dt0-assembly3.cif.gz_C proline hydroxylase h11-n101i mutant 0.8708 1 225
7dt0-assembly3.cif.gz_D proline hydroxylase h11-n101i mutant 0.8698 1 225
8h7v-assembly1.cif.gz_A trans-3/4-proline-hydroxylase h11 with akg 0.8624 2 235
4mhr-assembly1.cif.gz_A crystal structure of ectd from s. alaskensis in its apoform 0.8603 2 225
7dt0-assembly1.cif.gz_H-2 proline hydroxylase h11-n101i mutant 0.859 1 235
ID Description Score Start End Superfamily
af_A0A1R3LVS2_5_190_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.8449 65 235 2.60.120.620
af_Q9ZVF6_4_280_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.825 2 226 2.60.120.620
af_Q9DB26_1_291_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.8074 2 246 2.60.120.620
af_A8E5P7_122_256_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.8063 114 232 2.60.120.620
4xaaA00 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.8045 1 229 2.60.120.620
ID Description Score Start End GO Terms
AF-A0A0L0MHX6-F1-model_v4 Phytanoyl-CoA dioxygenase family protein 0.9815 1 160 GO:0005506
GO:0016706
AF-A0A4Q4CQ99-F1-model_v4 Phytanoyl-CoA dioxygenase family protein 0.981 1 174 GO:0005506
GO:0016706
AF-A0A355Q630-F1-model_v4 Phytanoyl-CoA dioxygenase 0.9766 6 277 GO:0005506
GO:0016706
AF-A0A0L0MHX6-F1-model_v4 Phytanoyl-CoA dioxygenase family protein 0.9755 1 160 GO:0005506
GO:0016706
AF-A0A533IY64-F1-model_v4 deleted 0.9749 1 193

Map