F369323

General Info

Members Datasets Scaffolds Average Seq Length
260 242 87 669

Family's Representative Sequence

Representative Sequence 3300005340|Ga0070689_100014701|Ga0070689_1000147012
Length 716
Sequence LDRVGTVRGSGWVIASDSKINGKHRGSSTHPLPRTVLNRRRGNEMLALGFHGGHKRVDEDNRVGWSSHDSAAVLVRDGEVLAAIEEERLNRIKHSNCFPALSIRYCLDRYKLKLSDLDLIATNDDESWADMMARRKHLESPESRDRFDCRSYIAWSFQREFGVDVTRKLRFCGHHLAHAWSAYGPSGFANALVLILDGDGDSLSGMVFQTQKGKLIQLKEYGVDQSLGHFYQRMISYLGYDRFDEYKVMGLAPYGDASVYKNLFERCYRLLPNGDYSLGGTLTWMTHLDSAGLVKAARRKGGPFTQTHKDFAAALQSMLERIVLHILTHYQKVTKQTNLCLAGGVAHNCSMNGKVLYSGLFKEVFVQPAAHDAGGALGAIYGVINNESLSPRIKKMDHLYFGTDIGEDDSIEATLKSWADFISYEKVDRIAPRVARLLADGEVVGWVQGRSEFGPRALGNRSILADPRPAENKLLINEMVKKRESYRPFAPSVLEERVRDFYDVPENKTEYPFMIFVVRTREDKRSILQAVTHLDGTARLHSVSSRTNPLYHELISEFDKLTGVPVLLNTSFNNNTEPIVDSAEEAIVCYLTTGLNSLVIGNYLIRRKEVDTLPLVYEQLAIRLPRSRRLVQRQSEIEPGRVEVVFELDSSVNRYFSQPLIRISPEMFSILHTADGRLRLCELTAQLGISGADKIKALTQEFIELWSRRAVILTPF

Samples

Sample ID Description Type Environment
1 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
2 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
3 2509276019 Ensifer aridi TW10 Isolate Nodule
4 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
5 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
6 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
7 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
8 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
9 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
10 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
11 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
12 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
13 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
14 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
15 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
16 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
17 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
18 2528768022 Bradyrhizobium japonicum USDA 123 Isolate Nodule
19 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
20 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
21 2718217991 Paraburkholderia sprentiae WSM5005 Isolate Nodule
22 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
23 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
24 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
25 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
26 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
27 2791355199
28 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
29 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
30 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
31 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
32 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
33 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
34 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
35 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
36 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
37 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
38 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
39 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
40 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
41 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
42 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
43 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
44 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
45 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
46 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
47 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
48 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
49 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
50 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
51 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
52 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
53 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
54 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
55 2842038055 Bradyrhizobium centrosematis SEMIA 424 Isolate Nodule
56 2842045827 Bradyrhizobium centrosematis SEMIA 431 Isolate Nodule
57 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
58 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
59 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
60 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
61 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
62 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
63 2869162929 Mesorhizobium sanjuanii BSA136 Isolate Nodule
64 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
65 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
66 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
67 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
68 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
69 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
70 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
71 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
72 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
73 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
74 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
75 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
76 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
77 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
78 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
79 2888350351 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 Isolate Nodule
80 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
81 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
82 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
83 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
84 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
85 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
86 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
87 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
88 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
89 2904699407
90 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
91 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
92 2906610324
93 2906626472 Bradyrhizobium hipponense aSej3 Isolate Unclassified
94 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
95 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
96 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
97 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
98 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
99 2922368715
100 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
101 2922425934
102 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
103 2932794094 Bradyrhizobium sp. S3.2.6 Isolate Nodule
104 2932801729 Bradyrhizobium sp. S3.3.6 Isolate Nodule
105 2932809354 Bradyrhizobium sp. S3.5.5 Isolate Nodule
106 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
107 2932828146 Bradyrhizobium sp. S3.9.2 Isolate Nodule
108 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
109 2935616580 Bradyrhizobium sp. RT7a Isolate Nodule
110 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
111 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
112 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
113 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
114 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
115 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
116 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
117 2935801545 Bradyrhizobium sp. RT10b Isolate Nodule
118 2935810662 Bradyrhizobium sp. RT3a Isolate Nodule
119 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
120 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
121 2935855204 Bradyrhizobium sp. RT7b Isolate Nodule
122 2935864058 Bradyrhizobium sp. RT9a Isolate Nodule
123 2935873716 Bradyrhizobium sp. RT9b Isolate Nodule
124 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
125 2935959822 Bradyrhizobium sp. F1.4.3 Isolate Nodule
126 2935984226 Bradyrhizobium sp. i1.15.2 Isolate Nodule
127 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
128 2936002035 Bradyrhizobium sp. I1.8.5 Isolate Nodule
129 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
130 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
131 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
132 2936037263 Bradyrhizobium sp. JR18.2 Isolate Nodule
133 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
134 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
135 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
136 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
137 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
138 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
139 2958115193 Mesorhizobium sp. M00.F.Ca.ET.217.01.1.1 Isolate Nodule
140 2968091066 Mesorhizobium sp. AA23 Isolate Unclassified
141 2968128360 Mesorhizobium sp. WSM3873 Isolate Unclassified
142 2977986579 Mesorhizobium intechi BD68 Isolate Unclassified
143 2979742915 Mesorhizobium sp. M2A.F.Ca.ET.046.02.1.1 Isolate Nodule
144 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
145 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
146 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
147 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
148 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
149 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
150 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
151 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
152 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
153 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
154 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
155 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
156 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
157 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
158 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
159 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
160 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
161 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
162 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
163 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
164 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
165 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
166 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
167 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
168 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
169 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
170 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
171 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
172 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
173 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
174 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
175 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
176 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
177 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
178 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
179 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
180 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
181 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
182 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
183 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
184 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
185 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
186 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
187 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
188 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
189 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
190 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
191 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
192 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
193 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
194 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
195 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
196 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
197 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
198 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
199 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
200 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
201 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
202 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
203 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
204 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
205 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
206 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
207 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
208 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
209 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
210 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
211 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
212 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
213 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
214 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
215 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
216 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
217 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
218 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
219 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
220 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
221 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
222 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified
223 8004703790 Mesorhizobium sp. M00.F.Ca.ET.158.01.1.1 Isolate Nodule
224 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
225 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
226 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
227 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
228 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
229 8016511872 Bradyrhizobium sp. S3.14.4 Isolate Nodule
230 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
231 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
232 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
233 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
234 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
235 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
236 8019629233 Bradyrhizobium sp. GM6.1 Isolate Nodule
237 8019668869 Bradyrhizobium sp. GM2.4 Isolate Nodule
238 8019678201 Bradyrhizobium sp. GM0.4 Isolate Nodule
239 8055266321 Paraburkholderia rhynchosiae LMG 27174 Isolate Nodule
240 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule
241 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule
242 8056967851 Bradyrhizobium zhengyangense WYCCWR 12678 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 34.9
Metatranscriptomes 0
Isolates 65.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.38
Nodule 47.31
Rhizoplane 0.38
Rhizosphere 23.85
Stem 0
Stem Tuber 0
Unclassified 23.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10102610 3300005293 Bacteria 3075
2 Ga0070683_100057470 3300005329 Bacteria 3614
3 Ga0070689_100014701 3300005340 Bacteria 5692
4 Ga0070705_100030963 3300005440 Bacteria 2958
5 Ga0070662_100003949 3300005457 Bacteria 9300
6 Ga0070665_100009326 3300005548 Bacteria 9932
7 Ga0070665_100057258 3300005548 Bacteria 3908
8 Ga0070665_100120360 3300005548 Bacteria 2627
9 Ga0068855_100020934 3300005563 Bacteria 7842
10 Ga0068855_100027426 3300005563 Bacteria 6813
11 Ga0068852_100012279 3300005616 Bacteria 6496
12 Ga0068863_100015334 3300005841 Bacteria 7365
13 Ga0068860_100014934 3300005843 Bacteria 7592
14 Ga0075365_10000235 3300006038 Bacteria 18981
15 Ga0075364_10016576 3300006051 Bacteria 4585
16 Ga0075362_10007340 3300006177 Bacteria 4170
17 Ga0075367_10001113 3300006178 Bacteria 11145
18 Ga0075366_10016570 3300006195 Bacteria 4238
19 Ga0075431_100001901 3300006847 Bacteria 19819
20 Ga0075431_100011283 3300006847 Bacteria 9002
21 Ga0075435_100012094 3300007076 Bacteria 6379
22 Ga0105240_10002672 3300009093 Bacteria 28382
23 Ga0105240_10014674 3300009093 Bacteria 10691
24 Ga0105240_10021407 3300009093 Bacteria 8599
25 Ga0105247_10003008 3300009101 Bacteria 11170
26 Ga0105247_10035872 3300009101 Bacteria 3023
27 Ga0114129_10039321 3300009147 Bacteria 6668
28 Ga0114129_10204010 3300009147 Bacteria 2676
29 Ga0114129_10209275 3300009147 Bacteria 2637
30 Ga0105248_10039309 3300009177 Bacteria 5298
31 Ga0105248_10046225 3300009177 Bacteria 4879
32 Ga0105248_10157321 3300009177 Bacteria 2564
33 Ga0105237_10005238 3300009545 Bacteria 14670
34 Ga0105249_10049317 3300009553 Bacteria 3840
35 Ga0214544_1002538 3300021320 Bacteria 38352
36 Ga0214542_1007676 3300021321 Bacteria 18535
37 Ga0214543_1005252 3300021327 Bacteria 24005
38 Ga0207710_10001025 3300025900 Bacteria 14564
39 Ga0207695_10018333 3300025913 Bacteria 8097
40 Ga0207695_10022611 3300025913 Bacteria 7130
41 Ga0207671_10047898 3300025914 Bacteria 3163
42 Ga0207706_10005830 3300025933 Bacteria 11458
43 Ga0207670_10006645 3300025936 Bacteria 6431
44 Ga0207661_10040690 3300025944 Bacteria 3655
45 Ga0207667_10009135 3300025949 Bacteria 11709
46 Ga0207712_10024742 3300025961 Bacteria 3981
47 Ga0207698_10007797 3300026142 Bacteria 6728
48 Ga0209389_1000204 3300027296 Bacteria 42757
49 Ga0209489_103337 3300027361 Bacteria 31450
50 Ga0209700_100026 3300027363 Bacteria 224498
51 Ga0268266_10042228 3300028379 Bacteria 3894
52 Ga0268264_10040167 3300028381 Bacteria 3866
53 Ga0307517_10061774 3300028786 Bacteria 3538
54 Ga0265331_10004333 3300031250 Bacteria 8883
55 Ga0265327_10028524 3300031251 Bacteria 3191
56 Ga0307513_10033227 3300031456 Bacteria 5801
57 Ga0307411_10001481 3300032005 Bacteria 9654
58 Ga0315911_1000016 3300033442 Bacteria 166408
59 Ga0436364_0516838 3300037853 Unclassified 3941
60 Ga0466966_0002687 3300044684 Bacteria 11649
61 Ga0466959_0003974 3300045049 Bacteria 9830
62 Ga0466967_0041089 3300045976 Bacteria 3984
63 Ga0495638_0014882 3300046460 Bacteria 5242
64 Ga0495632_0014742 3300046519 Bacteria 4410
65 Ga0495672_0003334 3300047320 Bacteria 13836
66 Ga0496109_0005121 3300048912 Bacteria 10947
67 Ga0496116_0000787 3300048919 Bacteria 40281
68 Ga0496122_0006256 3300048925 Bacteria 13763
69 Ga0496123_0004891 3300048926 Bacteria 13763
70 Ga0496124_0032425 3300048927 Bacteria 4613
71 Ga0501034_0002510 3300049571 Bacteria 22035
72 nmdc:mga03683_19480_c1 3300050489 Bacteria 2591
73 nmdc:mga00v17_34766_c1 3300050491 Bacteria 2996
74 nmdc:mga0k408_16357_c1 3300050493 Bacteria 4116
75 nmdc:mga0k408_2934_c2 3300050493 Bacteria 7078
76 nmdc:mga05p37_11184_c1 3300050507 Bacteria 10667
77 nmdc:mga05p37_229692_c1 3300050507 Bacteria 2236
78 nmdc:mga05p37_40633_c1 3300050507 Bacteria 5712
79 nmdc:mga06r32_8752_c1 3300050510 Bacteria 9118
80 nmdc:mga0n895_13768_c1 3300050512 Bacteria 7314
81 nmdc:mga0a205_113019_c1 3300050515 Bacteria 2615
82 Ga0500583_0000418 3300053092 Bacteria 13439
83 Ga0500641_0000454 3300053096 Bacteria 14866
84 Ga0500616_0005096 3300053153 Bacteria 9061
85 Ga0500622_0001155 3300053156 Bacteria 21920
86 Ga0500622_0003092 3300053156 Bacteria 11465
87 Ga0501084_0064603 3300054114 Bacteria 3062

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009177 Ga0105248_10157321 Ga0105248_101573211 558
2 3300050515 nmdc:mga0a205_113019_c1 nmdc:mga0a205_113019_c1_16_1749 561
3 iso_pu_bacteria 2847417321 2847421597 568
4 iso_pu_bacteria 2848992105 2848996364 568
5 3300009093 Ga0105240_10002672 Ga0105240_100026724 613
6 iso_pu_bacteria 2824773399 2824778832 615
7 iso_pu_bacteria 2841974524 2841976800 615
8 iso_pu_bacteria 2903748898 2903752282 615
9 iso_pu_bacteria 2922425934 2922432712 615
10 iso_pu_bacteria 2718217991 2719637247 621
11 3300054114 Ga0501084_0064603 Ga0501084_0064603_956_2953 622
12 iso_pu_bacteria 2558860100 2558860628 627
13 iso_pu_bacteria 2938649242 2938655289 635
14 iso_pu_bacteria 2996632988 2996633387 635
15 3300005457 Ga0070662_100003949 Ga0070662_1000039494 636
16 3300025933 Ga0207706_10005830 Ga0207706_100058302 636
17 3300031250 Ga0265331_10004333 Ga0265331_100043332 636
18 3300031250 Ga0265331_10004333 Ga0265331_100043334 636
19 3300031251 Ga0265327_10028524 Ga0265327_100285242 636
20 3300046460 Ga0495638_0014882 Ga0495638_0014882_2466_4478 638
21 3300053092 Ga0500583_0000418 Ga0500583_0000418_3705_5717 638
22 3300053156 Ga0500622_0001155 Ga0500622_0001155_11518_13530 638
23 3300009101 Ga0105247_10003008 Ga0105247_100030082 643
24 3300050493 nmdc:mga0k408_2934_c2 nmdc:mga0k408_2934_c2_2007_3977 643
25 3300005616 Ga0068852_100012279 Ga0068852_1000122792 644
26 3300006051 Ga0075364_10016576 Ga0075364_100165764 644
27 3300006177 Ga0075362_10007340 Ga0075362_100073402 644
28 3300006195 Ga0075366_10016570 Ga0075366_100165702 644
29 3300026142 Ga0207698_10007797 Ga0207698_100077973 644
30 3300050489 nmdc:mga03683_19480_c1 nmdc:mga03683_19480_c1_227_2200 644
31 3300050491 nmdc:mga00v17_34766_c1 nmdc:mga00v17_34766_c1_111_2084 644
32 3300050493 nmdc:mga0k408_16357_c1 nmdc:mga0k408_16357_c1_892_2865 644
33 3300021320 Ga0214544_1002538 Ga0214544_100253814 645
34 3300021321 Ga0214542_1007676 Ga0214542_10076765 645
35 3300021327 Ga0214543_1005252 Ga0214543_10052529 645
36 3300047320 Ga0495672_0003334 Ga0495672_0003334_3441_5417 645
37 iso_pu_bacteria 2881161766 2881163892 645
38 iso_pu_bacteria 2888350351 2888351606 645
39 3300005440 Ga0070705_100030963 Ga0070705_1000309632 646
40 3300005548 Ga0070665_100009326 Ga0070665_1000093264 647
41 3300005563 Ga0068855_100020934 Ga0068855_1000209344 647
42 3300009093 Ga0105240_10021407 Ga0105240_100214072 647
43 3300025913 Ga0207695_10022611 Ga0207695_100226113 647
44 3300053153 Ga0500616_0005096 Ga0500616_0005096_1428_3440 647
45 3300053156 Ga0500622_0003092 Ga0500622_0003092_1229_3226 647
46 3300006178 Ga0075367_10001113 Ga0075367_100011136 649
47 3300025913 Ga0207695_10018333 Ga0207695_100183335 649
48 3300031250 Ga0265331_10004333 Ga0265331_100043333 649
49 3300046519 Ga0495632_0014742 Ga0495632_0014742_656_2671 649
50 iso_pu_bacteria 2824600985 2824601134 649
51 iso_pu_bacteria 2824746037 2824749377 649
52 iso_pu_bacteria 2908775508 2908777840 649
53 3300005548 Ga0070665_100120360 Ga0070665_1001203602 650
54 3300006038 Ga0075365_10000235 Ga0075365_100002352 650
55 3300045976 Ga0466967_0041089 Ga0466967_0041089_485_2545 650
56 iso_pu_bacteria 2824609381 2824609461 650
57 iso_pu_bacteria 2824653114 2824654644 650
58 iso_pu_bacteria 2824671348 2824671405 650
59 iso_pu_bacteria 2824687955 2824688118 650
60 iso_pu_bacteria 2824696289 2824696848 650
61 iso_pu_bacteria 2824732956 2824733483 650
62 iso_pu_bacteria 8019668869 8019669537 650
63 3300005329 Ga0070683_100057470 Ga0070683_1000574702 651
64 3300005340 Ga0070689_100014701 Ga0070689_1000147012 651
65 3300005841 Ga0068863_100015334 Ga0068863_1000153342 651
66 3300009101 Ga0105247_10035872 Ga0105247_100358722 651
67 3300009177 Ga0105248_10039309 Ga0105248_100393092 651
68 3300025936 Ga0207670_10006645 Ga0207670_100066452 651
69 3300025944 Ga0207661_10040690 Ga0207661_100406902 651
70 3300044684 Ga0466966_0002687 Ga0466966_0002687_2743_4803 651
71 3300045049 Ga0466959_0003974 Ga0466959_0003974_6213_8273 651
72 iso_pu_bacteria 2847930680 2847933428 651
73 3300007076 Ga0075435_100012094 Ga0075435_1000120944 652
74 3300025900 Ga0207710_10001025 Ga0207710_100010253 652
75 iso_pu_bacteria 2513237092 2513622748 652
76 iso_pu_bacteria 2513237096 2513660840 652
77 iso_pu_bacteria 2513237137 2513863521 652
78 iso_pu_bacteria 2513237145 2513922644 652
79 iso_pu_bacteria 2513237161 2514017381 652
80 iso_pu_bacteria 2517572143 2517890669 652
81 iso_pu_bacteria 2524023228 2524541557 652
82 iso_pu_bacteria 2528768022 2528855893 652
83 iso_pu_bacteria 2617270735 2617353902 652
84 iso_pu_bacteria 2791355197 2793071690 652
85 iso_pu_bacteria 2802429603 2805917349 652
86 iso_pu_bacteria 2824635225 2824635299 652
87 iso_pu_bacteria 2824644064 2824644138 652
88 iso_pu_bacteria 2824704595 2824704745 652
89 iso_pu_bacteria 2824723954 2824724126 652
90 iso_pu_bacteria 2824753945 2824754747 652
91 iso_pu_bacteria 2824763712 2824764498 652
92 iso_pu_bacteria 2838122688 2838129857 652
93 iso_pu_bacteria 2841949485 2841955211 652
94 iso_pu_bacteria 2841966195 2841972649 652
95 iso_pu_bacteria 2844315083 2844322499 652
96 iso_pu_bacteria 2874612657 2874617051 652
97 iso_pu_bacteria 2874620515 2874623860 652
98 iso_pu_bacteria 2879083081 2879088790 652
99 iso_pu_bacteria 2881665667 2881669526 652
100 iso_pu_bacteria 2888378607 2888386745 652
101 iso_pu_bacteria 2903727486 2903733669 652
102 iso_pu_bacteria 2904690495 2904693731 652
103 iso_pu_bacteria 2904711408 2904713953 652
104 iso_pu_bacteria 2906602504 2906609027 652
105 iso_pu_bacteria 2906643746 2906646893 652
106 iso_pu_bacteria 2908756301 2908763287 652
107 iso_pu_bacteria 2922368715 2922369611 652
108 iso_pu_bacteria 2935608549 2935616185 652
109 iso_pu_bacteria 2935638405 2935647128 652
110 iso_pu_bacteria 2935648319 2935652786 652
111 iso_pu_bacteria 2935656913 2935661228 652
112 iso_pu_bacteria 2935703347 2935712449 652
113 iso_pu_bacteria 2935827899 2935836543 652
114 iso_pu_bacteria 2935864058 2935871916 652
115 iso_pu_bacteria 2935873716 2935882744 652
116 iso_pu_bacteria 2935916978 2935925523 652
117 iso_pu_bacteria 2935959822 2935963165 652
118 iso_pu_bacteria 2935984226 2935988810 652
119 iso_pu_bacteria 2935992306 2936000902 652
120 iso_pu_bacteria 2936011229 2936015516 652
121 iso_pu_bacteria 2936019824 2936024150 652
122 iso_pu_bacteria 2936028420 2936033402 652
123 iso_pu_bacteria 2936046547 2936051258 652
124 iso_pu_bacteria 3005474847 3005482124 652
125 iso_pu_bacteria 3005483717 3005490644 652
126 iso_pu_bacteria 3005587118 3005591478 652
127 iso_pu_bacteria 3005594810 3005602908 652
128 iso_pu_bacteria 3005718088 3005725380 652
129 iso_pu_bacteria 8019576017 8019585374 652
130 iso_pu_bacteria 8019597564 8019598115 652
131 iso_pu_bacteria 8019608314 8019610266 652
132 iso_pu_bacteria 8055266321 8055268852 652
133 iso_pu_bacteria 8056967851 8056973377 652
134 iso_pu_bacteria 2513237090 2513613095 653
135 iso_pu_bacteria 2841957949 2841963759 653
136 iso_pu_bacteria 2935630451 2935637470 653
137 iso_pu_bacteria 2935777560 2935784734 653
138 iso_pu_bacteria 2941507105 2941514026 653
139 iso_pu_bacteria 2941515067 2941521988 653
140 iso_pu_bacteria 2941523033 2941529726 653
141 iso_pu_bacteria 8019555841 8019564862 653
142 iso_pu_bacteria 8019629233 8019632191 653
143 iso_pu_bacteria 8019678201 8019686541 653
144 3300009147 Ga0114129_10209275 Ga0114129_102092751 654
145 3300009553 Ga0105249_10049317 Ga0105249_100493172 654
146 3300031456 Ga0307513_10033227 Ga0307513_100332272 654
147 3300049571 Ga0501034_0002510 Ga0501034_0002510_7493_9523 654
148 3300050507 nmdc:mga05p37_229692_c1 nmdc:mga05p37_229692_c1_53_2086 654
149 3300053096 Ga0500641_0000454 Ga0500641_0000454_4236_6257 654
150 iso_pu_bacteria 2958115193 2958121814 654
151 iso_pu_bacteria 2968091066 2968094347 654
152 iso_pu_bacteria 2979742915 2979751189 654
153 iso_pu_bacteria 8004703790 8004712658 654
154 3300005548 Ga0070665_100057258 Ga0070665_1000572583 655
155 3300005843 Ga0068860_100014934 Ga0068860_1000149345 655
156 3300025961 Ga0207712_10024742 Ga0207712_100247422 655
157 3300028379 Ga0268266_10042228 Ga0268266_100422283 655
158 3300028381 Ga0268264_10040167 Ga0268264_100401672 655
159 3300037853 Ga0436364_0516838 Ga0436364_0516838_453_2483 655
160 3300048919 Ga0496116_0000787 Ga0496116_0000787_7197_9236 655
161 iso_pu_bacteria 2508501009 2508540424 655
162 iso_pu_bacteria 2508501042 2508696457 655
163 iso_pu_bacteria 2513237144 2513914827 655
164 iso_pu_bacteria 2842038055 2842045555 655
165 iso_pu_bacteria 2842045827 2842053154 655
166 iso_pu_bacteria 2874590934 2874593896 655
167 iso_pu_bacteria 2874645413 2874646380 655
168 iso_pu_bacteria 2876771140 2876773528 655
169 iso_pu_bacteria 2876818435 2876821749 655
170 iso_pu_bacteria 2879074833 2879077442 655
171 iso_pu_bacteria 2900634093 2900643237 655
172 iso_pu_bacteria 2906626472 2906627373 655
173 iso_pu_bacteria 8001522603 8001526853 655
174 3300005563 Ga0068855_100027426 Ga0068855_1000274263 656
175 3300009093 Ga0105240_10014674 Ga0105240_100146747 656
176 3300009147 Ga0114129_10204010 Ga0114129_102040102 656
177 3300009177 Ga0105248_10046225 Ga0105248_100462253 656
178 3300009545 Ga0105237_10005238 Ga0105237_100052387 656
179 3300025949 Ga0207667_10009135 Ga0207667_100091356 656
180 3300027296 Ga0209389_1000204 Ga0209389_100020433 656
181 3300027361 Ga0209489_103337 Ga0209489_10333729 656
182 3300027363 Ga0209700_100026 Ga0209700_10002663 656
183 3300033442 Ga0315911_1000016 Ga0315911_1000016153 656
184 iso_pu_bacteria 2513237101 2513698494 656
185 iso_pu_bacteria 2513237104 2513719921 656
186 iso_pu_bacteria 2513237351 2514592896 656
187 iso_pu_bacteria 2524023210 2524470933 656
188 iso_pu_bacteria 2721755755 2723844495 656
189 iso_pu_bacteria 2728368998 2728751388 656
190 iso_pu_bacteria 2756170246 2756677649 656
191 iso_pu_bacteria 2791355199 2793083239 656
192 iso_pu_bacteria 2824617872 2824618261 656
193 iso_pu_bacteria 2824626560 2824627032 656
194 iso_pu_bacteria 2824714736 2824714809 656
195 iso_pu_bacteria 2841983080 2841986094 656
196 iso_pu_bacteria 2869162929 2869166133 656
197 iso_pu_bacteria 2879099564 2879102071 656
198 iso_pu_bacteria 2882456835 2882463090 656
199 iso_pu_bacteria 2885374607 2885378391 656
200 iso_pu_bacteria 2896384573 2896390920 656
201 iso_pu_bacteria 2904699407 2904710684 656
202 iso_pu_bacteria 2906610324 2906615296 656
203 iso_pu_bacteria 2908739725 2908739941 656
204 iso_pu_bacteria 2932784394 2932785451 656
205 iso_pu_bacteria 2932794094 2932800923 656
206 iso_pu_bacteria 2932801729 2932809265 656
207 iso_pu_bacteria 2932809354 2932816064 656
208 iso_pu_bacteria 2932818245 2932825398 656
209 iso_pu_bacteria 2932828146 2932835007 656
210 iso_pu_bacteria 2935616580 2935625194 656
211 iso_pu_bacteria 2935665750 2935673855 656
212 iso_pu_bacteria 2935801545 2935809556 656
213 iso_pu_bacteria 2935810662 2935818689 656
214 iso_pu_bacteria 2935837841 2935846345 656
215 iso_pu_bacteria 2935855204 2935863822 656
216 iso_pu_bacteria 2936002035 2936010489 656
217 iso_pu_bacteria 2936037263 2936045411 656
218 iso_pu_bacteria 2941538514 2941546809 656
219 iso_pu_bacteria 2977986579 2977992391 656
220 iso_pu_bacteria 8006933436 8006934349 656
221 iso_pu_bacteria 8006964411 8006972076 656
222 iso_pu_bacteria 8006973647 8006974324 656
223 iso_pu_bacteria 8006984368 8006992716 656
224 iso_pu_bacteria 8006994254 8007001818 656
225 iso_pu_bacteria 8016511872 8016512291 656
226 iso_pu_bacteria 8017057580 8017066743 656
227 iso_pu_bacteria 8056681323 8056688759 656
228 3300009147 Ga0114129_10039321 Ga0114129_100393213 657
229 3300028786 Ga0307517_10061774 Ga0307517_100617742 657
230 3300032005 Ga0307411_10001481 Ga0307411_100014813 657
231 3300050507 nmdc:mga05p37_40633_c1 nmdc:mga05p37_40633_c1_2572_4641 657
232 iso_pu_bacteria 2509276019 2509378604 657
233 iso_pu_bacteria 2524023205 2524443041 657
234 iso_pu_bacteria 2744054633 2745079704 657
235 iso_pu_bacteria 2850079185 2850083045 657
236 iso_pu_bacteria 2855872281 2855877487 657
237 iso_pu_bacteria 2876761206 2876765111 657
238 iso_pu_bacteria 643692032 643692119 657
239 iso_pu_bacteria 8019565922 8019574966 657
240 3300006847 Ga0075431_100001901 Ga0075431_1000019014 658
241 3300050512 nmdc:mga0n895_13768_c1 nmdc:mga0n895_13768_c1_4867_6891 658
242 iso_pu_bacteria 2968128360 2968131000 658
243 iso_pu_bacteria 2824661429 2824662678 660
244 iso_pu_bacteria 2824679649 2824683821 660
245 iso_pu_bacteria 2876363079 2876366072 660
246 iso_pu_bacteria 2894232714 2894237834 660
247 iso_pu_bacteria 2903521522 2903526157 660
248 iso_pu_bacteria 2903528002 2903530442 660
249 iso_pu_bacteria 2922361189 2922363089 660
250 iso_pu_bacteria 2922386360 2922393223 660
251 iso_pu_bacteria 8056673599 8056677298 660
252 3300006847 Ga0075431_100011283 Ga0075431_1000112836 661
253 3300048912 Ga0496109_0005121 Ga0496109_0005121_4479_6512 661
254 3300050507 nmdc:mga05p37_11184_c1 nmdc:mga05p37_11184_c1_8138_10204 661
255 3300050510 nmdc:mga06r32_8752_c1 nmdc:mga06r32_8752_c1_897_2948 661
256 3300048925 Ga0496122_0006256 Ga0496122_0006256_5067_7118 662
257 3300048926 Ga0496123_0004891 Ga0496123_0004891_5067_7118 662
258 3300048927 Ga0496124_0032425 Ga0496124_0032425_153_2204 662
259 3300005293 Ga0065715_10102610 Ga0065715_101026102 665
260 3300025914 Ga0207671_10047898 Ga0207671_100478982 665

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16861

Carbam_trans_C

Carbamoyltransferase C-terminus

435

607

0.98

PF02543

Carbam_trans_N

Carbamoyltransferase N-terminus

61

381

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vzu-assembly1.cif.gz_A the structure of gdmn y82f mutant 0.9605 1 655
7vx0-assembly1.cif.gz_B the structure of gdmn complex with atp 0.9564 1 655
7vzq-assembly1.cif.gz_A the structure of gdmn v24y/g157a/r158a/g188r mutant in complex with carbamoyl adenylate intermediate 0.9497 1 655
7vzu-assembly1.cif.gz_A the structure of gdmn y82f mutant 0.9449 1 655
7vx0-assembly1.cif.gz_B the structure of gdmn complex with atp 0.9409 1 655
ID Description Score Start End Superfamily
3vewA03 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9728 348 556 3.90.870.20
3vewA03 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9589 348 556 3.90.870.20
af_Q58458_398_606_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9508 347 556 3.90.870.20
af_Q58458_398_606_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9464 347 556 3.90.870.20
af_Q58451_301_510_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9449 346 556 3.90.870.20
ID Description Score Start End GO Terms
AF-A0A7W0MQF0-F1-model_v4 Carbamoyltransferase 0.9881 383 554 GO:0016740
AF-A0A399SMU6-F1-model_v4 Carbamoyltransferase 0.985 371 558 GO:0016740
AF-A0A2V8VJ52-F1-model_v4 Carbamoyltransferase 0.9833 365 557 GO:0016740
AF-A0A7W8XL03-F1-model_v4 Putative NodU family carbamoyl transferase 0.9828 137 428 GO:0009058
GO:0016740
AF-A0A2V8R0V2-F1-model_v4 Carbamoyltransferase C-terminal domain-containing protein 0.9817 383 556

Feature Viewer

pLDDT pTM Quality
91.76 0.92 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map