F367682

General Info

Members Datasets Scaffolds Average Seq Length
257 192 514 510

Family's Representative Sequence

Representative Sequence 3300053117|Ga0500593_000079|Ga0500593_000079_10953_12503
Length 516
Sequence MIVPFSVSDFIDRAVQVYGDRVGVVDEPDQPAPPLGGGELTYAEIGALARRQAAKLDELGLAVGDRVAVVSHNSARLLTSFFGVSGWGRVLVPVNFRLRPDEVRYIVEHSGARVLLIDPELEDSLKDVEAEFKLVLGDDDSLYAAEGTEPKPWEPDENATACINYTSGTTARPKGVQITHRNVWVNATTFGLHAQASDRDVYLHTLPMFHANGWGWPYLATGVGAKHIVLRKIDGAEILRRVRDHGVTVMCAAPAVAAAVLEAAQTWEGEIPGRDRVRIIMAGAPPPTKTVARVEEELGWEFIQIYGLTETSPLLTFNRTRAEWDDLEAEERASLLTRAGAPALGVRLKISDDPDNEGEVLARSNVVLEGYWEQPEESARALAGGWFHTGDGGVIGDDGYLTISDRKKDVIITGGENVSSIEVEDVIFSHPAVAEVAVIGIPSEKWGETIMALVVLTEGEEVTEAELIAWCKDKAAGYKAPTVIEFRDDLARTATGKLQKFKLRAPYWEGRERQVN

Samples

Sample ID Description Type Environment
1 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
45 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
46 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
49 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
50 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
75 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
76 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
82 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
83 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
84 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
85 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
86 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
87 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
93 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
94 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
95 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
96 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
97 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
98 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
99 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
102 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
103 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
104 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
105 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
106 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
107 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
108 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
109 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
110 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
111 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
112 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
113 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
114 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
115 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
116 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
117 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
118 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
119 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
120 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
121 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
122 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
123 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
126 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
127 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
128 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
129 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
130 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
133 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
134 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
135 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
136 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
137 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
138 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
139 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
140 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
141 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
142 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
143 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
146 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
147 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
148 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
149 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
153 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
159 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
166 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
167 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
168 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
169 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
170 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
171 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
172 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
173 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
174 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
175 2527291627 Frankia casuarinae Thr Isolate Nodule
176 2527291629 Frankia sp. BMG5.23 Isolate Nodule
177 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
178 2576861822 Frankia sp. CeD Isolate Nodule
179 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
180 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
181 2643221561 Nocardioides sp. Root151 Isolate Unclassified
182 2643221641 Nocardioides sp. Root122 Isolate Unclassified
183 2643221696 Nocardioides sp. Root140 Isolate Unclassified
184 2684623036 Frankia sp. CgIM4 Isolate Nodule
185 2710264753 Frankia sp. KB5 Isolate Nodule
186 2739367898 Nocardioides sp. CF479 Isolate Unclassified
187 2773857924 Frankia sp. CgIS1 Isolate Nodule
188 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
189 2862574272 Streptomyces sp. AcE210 Isolate Nodule
190 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
191 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
192 637000116 Frankia casuarinae CcI3 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.83
Metatranscriptomes 1.17
Isolates 7

Biome Distribution

Category Percentage (%)
Aerial Root 0.39
Bulb 0
Endosphere 1.95
Nodule 3.11
Rhizoplane 8.17
Rhizosphere 81.71
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500593_000079 3300053117 Bacteria 35855
2 JGI24737J22298_10016288 3300001990 Bacteria 2400
3 Ga0070658_10096683 3300005327 Bacteria 2438
4 Ga0070680_100001030 3300005336 Bacteria 19948
5 Ga0070682_100017819 3300005337 Bacteria 4143
6 Ga0068868_100169541 3300005338 Bacteria 1807
7 Ga0070660_100046953 3300005339 Bacteria 3311
8 Ga0070660_100051540 3300005339 Bacteria 3170
9 Ga0070689_100035198 3300005340 Bacteria 3825
10 Ga0070675_100048915 3300005354 Bacteria 3468
11 Ga0070675_100147425 3300005354 Bacteria 2016
12 Ga0070714_100034640 3300005435 Bacteria 4229
13 Ga0070700_100002671 3300005441 Bacteria 9123
14 Ga0070700_100059682 3300005441 Bacteria 2402
15 Ga0070663_100010839 3300005455 Bacteria 5695
16 Ga0070662_100033960 3300005457 Bacteria 3595
17 Ga0070681_10016635 3300005458 Bacteria 7342
18 Ga0068867_100064548 3300005459 Bacteria 2723
19 Ga0070685_10002809 3300005466 Bacteria 8892
20 Ga0070698_100011240 3300005471 Bacteria 9508
21 Ga0070679_100105292 3300005530 Bacteria 2807
22 Ga0070684_100006813 3300005535 Bacteria 8862
23 Ga0070672_100032330 3300005543 Bacteria 3947
24 Ga0070665_100000151 3300005548 Bacteria 127579
25 Ga0070664_100116110 3300005564 Bacteria 2340
26 Ga0068857_100003545 3300005577 Bacteria 13049
27 Ga0070702_100015675 3300005615 Bacteria 3875
28 Ga0068852_100005612 3300005616 Bacteria 9000
29 Ga0068852_100077027 3300005616 Bacteria 2946
30 Ga0068864_100091732 3300005618 Bacteria 2681
31 Ga0068870_10014464 3300005840 Bacteria 3728
32 Ga0068858_100078337 3300005842 Bacteria 3071
33 Ga0068862_100014781 3300005844 Bacteria 6483
34 Ga0075365_10009606 3300006038 Bacteria 5576
35 Ga0075365_10013377 3300006038 Bacteria 4905
36 Ga0075431_100051383 3300006847 Bacteria 4250
37 Ga0068865_100020728 3300006881 Bacteria 4267
38 Ga0105245_10041711 3300009098 Bacteria 4091
39 Ga0105238_10182520 3300009551 Bacteria 2075
40 Ga0105249_10010897 3300009553 Bacteria 7991
41 Ga0105249_10107660 3300009553 Bacteria 2631
42 Ga0105239_10006308 3300010375 Bacteria 13792
43 Ga0105239_10025219 3300010375 Bacteria 6547
44 Ga0157369_10078281 3300013105 Bacteria 3542
45 Ga0157378_10103280 3300013297 Bacteria 2604
46 Ga0163162_10220269 3300013306 Bacteria 2027
47 Ga0163162_10270562 3300013306 Bacteria 1831
48 Ga0157372_10002568 3300013307 Bacteria 19681
49 Ga0157372_10238525 3300013307 Bacteria 2109
50 Ga0157375_10052775 3300013308 Bacteria 3998
51 Ga0157375_10111986 3300013308 Bacteria 2829
52 Ga0163163_10010484 3300014325 Bacteria 8337
53 Ga0157380_10043653 3300014326 Bacteria 3510
54 Ga0157377_10029841 3300014745 Bacteria 2949
55 Ga0157379_10031785 3300014968 Bacteria 4703
56 Ga0206356_10949873 3300020070 Bacteria 2795
57 Ga0206353_10035519 3300020082 Bacteria 10576
58 Ga0213876_10009452 3300021384 Bacteria 5248
59 Ga0213875_10000252 3300021388 Bacteria 53969
60 Ga0224712_10004545 3300022467 Bacteria 3754
61 Ga0207688_10001793 3300025901 Bacteria 11404
62 Ga0207705_10074597 3300025909 Bacteria 2463
63 Ga0207707_10001565 3300025912 Bacteria 21065
64 Ga0207662_10039397 3300025918 Bacteria 2772
65 Ga0207657_10013338 3300025919 Bacteria 8062
66 Ga0207652_10001094 3300025921 Bacteria 24545
67 Ga0207687_10012291 3300025927 Bacteria 5598
68 Ga0207687_10023938 3300025927 Bacteria 4074
69 Ga0207687_10051084 3300025927 Bacteria 2881
70 Ga0207664_10008746 3300025929 Bacteria 7079
71 Ga0207706_10088392 3300025933 Bacteria 2724
72 Ga0207704_10025691 3300025938 Bacteria 3218
73 Ga0207704_10072863 3300025938 Bacteria 2185
74 Ga0207691_10001144 3300025940 Bacteria 26303
75 Ga0207689_10011034 3300025942 Bacteria 7765
76 Ga0207661_10029041 3300025944 Bacteria 4243
77 Ga0207677_10046216 3300026023 Bacteria 2914
78 Ga0207678_10026070 3300026067 Bacteria 5100
79 Ga0207678_10035605 3300026067 Bacteria 4333
80 Ga0207708_10000682 3300026075 Bacteria 25816
81 Ga0207708_10042597 3300026075 Bacteria 3459
82 Ga0207708_10153868 3300026075 Bacteria 1813
83 Ga0207641_10037500 3300026088 Bacteria 4049
84 Ga0207648_10015926 3300026089 Bacteria 6890
85 Ga0207674_10005374 3300026116 Bacteria 15237
86 Ga0207675_100006818 3300026118 Bacteria 10814
87 Ga0207683_10026701 3300026121 Bacteria 4987
88 Ga0207683_10072419 3300026121 Bacteria 3048
89 Ga0207683_10183235 3300026121 Bacteria 1899
90 Ga0207698_10004181 3300026142 Bacteria 8780
91 Ga0268266_10009005 3300028379 Bacteria 8825
92 Ga0265327_10001714 3300031251 Bacteria 26087
93 Ga0265327_10026507 3300031251 Bacteria 3354
94 Ga0265327_10042836 3300031251 Bacteria 2427
95 Ga0307413_10000178 3300031824 Bacteria 18068
96 Ga0307413_10095180 3300031824 Bacteria 1952
97 Ga0307406_10120835 3300031901 Bacteria 1821
98 Ga0307409_100012335 3300031995 Bacteria 5442
99 Ga0307416_100124537 3300032002 Bacteria 2306
100 Ga0316574_0008217 3300035398 Bacteria 5782
101 Ga0373925_0019969 3300037068 Bacteria 4875
102 Ga0395899_0094517 3300037312 Bacteria 2163
103 Ga0395900_0012233 3300037418 Bacteria 8774
104 Ga0395898_0013828 3300037466 Bacteria 8296
105 Ga0395898_0032380 3300037466 Bacteria 5218
106 Ga0436364_0025107 3300037853 Bacteria 84205
107 Ga0395901_0010883 3300038443 Bacteria 9219
108 Ga0395901_0016565 3300038443 Bacteria 7510
109 Ga0400485_18682 3300038735 Bacteria 8343
110 Ga0400483_119523 3300039062 Bacteria 26847
111 Ga0436365_1109861 3300039437 Bacteria 7513
112 Ga0436365_1587947 3300039437 Bacteria 8169
113 Ga0466969_0029033 3300044656 Bacteria 2826
114 Ga0466972_0011766 3300044658 Bacteria 4394
115 Ga0466966_0012290 3300044684 Bacteria 5673
116 Ga0466966_0028216 3300044684 Bacteria 3657
117 Ga0466961_0040023 3300044693 Bacteria 3004
118 Ga0466963_0071465 3300044694 Bacteria 2336
119 Ga0466968_0013606 3300044735 Bacteria 3200
120 Ga0466970_0009678 3300044765 Bacteria 4877
121 Ga0466970_0024726 3300044765 Bacteria 3142
122 Ga0466957_0048541 3300044842 Bacteria 2580
123 Ga0466960_0024519 3300044901 Bacteria 2722
124 Ga0466960_0063192 3300044901 Bacteria 1822
125 Ga0466959_0063492 3300045049 Bacteria 2681
126 Ga0466958_0062775 3300045836 Bacteria 2265
127 Ga0466967_0047933 3300045976 Bacteria 3728
128 Ga0466967_0055214 3300045976 Bacteria 3499
129 Ga0466967_0058138 3300045976 Bacteria 3417
130 Ga0495592_0034997 3300046454 Bacteria 3785
131 Ga0495603_0009680 3300046455 Bacteria 5829
132 Ga0495629_0008229 3300046459 Bacteria 7667
133 Ga0495629_0013095 3300046459 Bacteria 5993
134 Ga0495629_0043637 3300046459 Bacteria 3148
135 Ga0495629_0122586 3300046459 Bacteria 1811
136 Ga0495638_0051287 3300046460 Bacteria 2573
137 Ga0495651_0128407 3300046462 Bacteria 1854
138 Ga0495639_0003633 3300046475 Bacteria 6650
139 Ga0495639_0050979 3300046475 Bacteria 1881
140 Ga0495585_0052448 3300046492 Bacteria 2258
141 Ga0495594_0052768 3300046499 Bacteria 2238
142 Ga0495583_0007081 3300046506 Bacteria 7163
143 Ga0495606_0040657 3300046507 Bacteria 3124
144 Ga0495608_0026926 3300046511 Bacteria 3916
145 Ga0495616_0004578 3300046513 Bacteria 8702
146 Ga0495620_0000865 3300046515 Bacteria 18751
147 Ga0495620_0030537 3300046515 Bacteria 2480
148 Ga0495630_0018117 3300046517 Bacteria 5170
149 Ga0495631_0007720 3300046518 Bacteria 5460
150 Ga0495637_0036857 3300046520 Bacteria 2127
151 Ga0495643_0005320 3300046522 Bacteria 8722
152 Ga0495648_0070640 3300046524 Bacteria 2028
153 Ga0495666_0026071 3300046526 Bacteria 2884
154 Ga0495640_0065288 3300046533 Bacteria 2458
155 Ga0495586_0064222 3300046535 Bacteria 2000
156 Ga0495609_0011945 3300046538 Bacteria 4126
157 Ga0495597_0009458 3300046542 Bacteria 4813
158 Ga0495645_0030786 3300046543 Bacteria 3910
159 Ga0495622_0002765 3300046557 Bacteria 8384
160 Ga0495633_0010514 3300046558 Bacteria 5045
161 Ga0495634_0003056 3300046642 Bacteria 13614
162 Ga0495588_0077798 3300046674 Bacteria 1730
163 Ga0495657_0006750 3300046675 Bacteria 8951
164 Ga0495657_0017842 3300046675 Bacteria 5147
165 Ga0495657_0074508 3300046675 Bacteria 2209
166 Ga0495658_0063721 3300046683 Bacteria 2122
167 Ga0495613_0001114 3300046689 Bacteria 20445
168 Ga0495613_0006514 3300046689 Bacteria 8725
169 Ga0495613_0009894 3300046689 Bacteria 7088
170 Ga0495613_0022089 3300046689 Bacteria 4741
171 Ga0495613_0057081 3300046689 Bacteria 2866
172 Ga0495613_0066134 3300046689 Bacteria 2640
173 Ga0495624_0032916 3300046690 Bacteria 3359
174 Ga0495636_0005125 3300047318 Bacteria 5145
175 Ga0495636_0018863 3300047318 Bacteria 2769
176 Ga0495676_0024998 3300047321 Bacteria 5160
177 Ga0495680_0032498 3300047322 Bacteria 4235
178 Ga0495683_0051591 3300047323 Bacteria 2055
179 Ga0495687_003525 3300047443 Bacteria 11266
180 Ga0495675_0094971 3300047444 Bacteria 1869
181 Ga0495677_0041728 3300047445 Bacteria 1679
182 Ga0495685_028370 3300047447 Bacteria 1925
183 Ga0495681_0047952 3300047470 Bacteria 2029
184 Ga0495614_0033795 3300048089 Bacteria 2199
185 Ga0496100_0028898 3300048903 Bacteria 3424
186 Ga0496100_0044743 3300048903 Bacteria 2837
187 Ga0496102_0009920 3300048905 Bacteria 8192
188 Ga0496102_0012584 3300048905 Bacteria 7329
189 Ga0496102_0065081 3300048905 Bacteria 3341
190 Ga0496104_0002387 3300048907 Bacteria 16177
191 Ga0496105_0013305 3300048908 Bacteria 6529
192 Ga0496106_0042003 3300048909 Bacteria 3428
193 Ga0496107_0023383 3300048910 Bacteria 4370
194 Ga0496108_0054084 3300048911 Bacteria 3369
195 Ga0496108_0113131 3300048911 Bacteria 2323
196 Ga0496110_0040893 3300048913 Bacteria 4043
197 Ga0496110_0198535 3300048913 Bacteria 1822
198 Ga0496110_0206463 3300048913 Bacteria 1785
199 Ga0496111_0028126 3300048914 Bacteria 3982
200 Ga0496114_0012149 3300048917 Bacteria 6890
201 Ga0496114_0121758 3300048917 Bacteria 2244
202 Ga0496115_0017812 3300048918 Bacteria 5439
203 Ga0496115_0061784 3300048918 Bacteria 3021
204 Ga0496115_0074190 3300048918 Bacteria 2762
205 Ga0501034_0018248 3300049571 Bacteria 7197
206 Ga0501037_0015509 3300049573 Bacteria 5608
207 Ga0501037_0021782 3300049573 Bacteria 4742
208 Ga0501040_0158884 3300049576 Bacteria 1597
209 Ga0501043_0057689 3300049579 Bacteria 3048
210 Ga0501068_0000422 3300049584 Bacteria 21446
211 Ga0501068_0082739 3300049584 Bacteria 1972
212 Ga0501069_0000013 3300049585 Bacteria 147915
213 Ga0501070_0000012 3300049586 Bacteria 188541
214 Ga0501070_0030041 3300049586 Bacteria 4553
215 Ga0501071_0000264 3300049587 Bacteria 24618
216 Ga0501071_0009429 3300049587 Bacteria 6500
217 Ga0501071_0015152 3300049587 Bacteria 5288
218 Ga0501071_0052950 3300049587 Bacteria 2927
219 Ga0501071_0091883 3300049587 Bacteria 2230
220 Ga0501072_0008467 3300049588 Bacteria 7804
221 Ga0501072_0040671 3300049588 Bacteria 3650
222 Ga0501072_0124562 3300049588 Bacteria 2053
223 Ga0501073_0002248 3300049589 Bacteria 14454
224 Ga0501073_0020921 3300049589 Bacteria 4718
225 Ga0501074_0000337 3300049590 Bacteria 27375
226 Ga0501080_0011098 3300049742 Bacteria 8244
227 Ga0501080_0011897 3300049742 Bacteria 7972
228 Ga0501081_0071808 3300049743 Bacteria 2413
229 Ga0501083_0000308 3300049744 Bacteria 30932
230 Ga0501083_0008510 3300049744 Bacteria 7246
231 Ga0501045_0008854 3300049824 Bacteria 7026
232 Ga0501045_0033158 3300049824 Bacteria 3745
233 nmdc:mga0yw44_103492_c1 3300050492 Bacteria 1816
234 nmdc:mga06r32_42272_c1 3300050510 Bacteria 4333
235 Ga0495619_0013409 3300053085 Bacteria 5164
236 Ga0500566_0000593 3300053094 Bacteria 20272
237 Ga0501084_0035979 3300054114 Bacteria 4138
238 Ga0501084_0086748 3300054114 Bacteria 2628
239 Ga0530510_0087437 3300061734 Bacteria 2271
240 2528204831 2527291627 Bacteria 5309833
241 2528216275 2527291629 Bacteria 5267418
242 2546950178 2546825537 Bacteria 5389291
243 2579750783 2576861822 Bacteria 5004595
244 2616700951 2616644814 Bacteria 11555299
245 2623499899 2622736605 Bacteria 4992138
246 2643826587 2643221561 Bacteria 4984412
247 2644229857 2643221641 Bacteria 4490190
248 2644535625 2643221696 Bacteria 5431823
249 2686543241 2684623036 Bacteria 5199090
250 2710606211 2710264753 Bacteria 5455564
251 2740167804 2739367898 Bacteria 4367674
252 2774865982 2773857924 Bacteria 5256821
253 2795792704 2795385472 Bacteria 6627535
254 2862578690 2862574272 Bacteria 10567477
255 2974318434 2974315732 Bacteria 4602776
256 2984526644 2984523437 Bacteria 4508481
257 637879498 637000116 Bacteria 5433628
258 Ga0500593_000079
259 JGI24737J22298_10016288
260 Ga0070658_10096683
261 Ga0070680_100001030
262 Ga0070682_100017819
263 Ga0068868_100169541
264 Ga0070660_100046953
265 Ga0070660_100051540
266 Ga0070689_100035198
267 Ga0070675_100048915
268 Ga0070675_100147425
269 Ga0070714_100034640
270 Ga0070700_100002671
271 Ga0070700_100059682
272 Ga0070663_100010839
273 Ga0070662_100033960
274 Ga0070681_10016635
275 Ga0068867_100064548
276 Ga0070685_10002809
277 Ga0070698_100011240
278 Ga0070679_100105292
279 Ga0070684_100006813
280 Ga0070672_100032330
281 Ga0070665_100000151
282 Ga0070664_100116110
283 Ga0068857_100003545
284 Ga0070702_100015675
285 Ga0068852_100005612
286 Ga0068852_100077027
287 Ga0068864_100091732
288 Ga0068870_10014464
289 Ga0068858_100078337
290 Ga0068862_100014781
291 Ga0075365_10009606
292 Ga0075365_10013377
293 Ga0075431_100051383
294 Ga0068865_100020728
295 Ga0105245_10041711
296 Ga0105238_10182520
297 Ga0105249_10010897
298 Ga0105249_10107660
299 Ga0105239_10006308
300 Ga0105239_10025219
301 Ga0157369_10078281
302 Ga0157378_10103280
303 Ga0163162_10220269
304 Ga0163162_10270562
305 Ga0157372_10002568
306 Ga0157372_10238525
307 Ga0157375_10052775
308 Ga0157375_10111986
309 Ga0163163_10010484
310 Ga0157380_10043653
311 Ga0157377_10029841
312 Ga0157379_10031785
313 Ga0206356_10949873
314 Ga0206353_10035519
315 Ga0213876_10009452
316 Ga0213875_10000252
317 Ga0224712_10004545
318 Ga0207688_10001793
319 Ga0207705_10074597
320 Ga0207707_10001565
321 Ga0207662_10039397
322 Ga0207657_10013338
323 Ga0207652_10001094
324 Ga0207687_10012291
325 Ga0207687_10023938
326 Ga0207687_10051084
327 Ga0207664_10008746
328 Ga0207706_10088392
329 Ga0207704_10025691
330 Ga0207704_10072863
331 Ga0207691_10001144
332 Ga0207689_10011034
333 Ga0207661_10029041
334 Ga0207677_10046216
335 Ga0207678_10026070
336 Ga0207678_10035605
337 Ga0207708_10000682
338 Ga0207708_10042597
339 Ga0207708_10153868
340 Ga0207641_10037500
341 Ga0207648_10015926
342 Ga0207674_10005374
343 Ga0207675_100006818
344 Ga0207683_10026701
345 Ga0207683_10072419
346 Ga0207683_10183235
347 Ga0207698_10004181
348 Ga0268266_10009005
349 Ga0265327_10001714
350 Ga0265327_10026507
351 Ga0265327_10042836
352 Ga0307413_10000178
353 Ga0307413_10095180
354 Ga0307406_10120835
355 Ga0307409_100012335
356 Ga0307416_100124537
357 Ga0316574_0008217
358 Ga0373925_0019969
359 Ga0395899_0094517
360 Ga0395900_0012233
361 Ga0395898_0013828
362 Ga0395898_0032380
363 Ga0436364_0025107
364 Ga0395901_0010883
365 Ga0395901_0016565
366 Ga0400485_18682
367 Ga0400483_119523
368 Ga0436365_1109861
369 Ga0436365_1587947
370 Ga0466969_0029033
371 Ga0466972_0011766
372 Ga0466966_0012290
373 Ga0466966_0028216
374 Ga0466961_0040023
375 Ga0466963_0071465
376 Ga0466968_0013606
377 Ga0466970_0009678
378 Ga0466970_0024726
379 Ga0466957_0048541
380 Ga0466960_0024519
381 Ga0466960_0063192
382 Ga0466959_0063492
383 Ga0466958_0062775
384 Ga0466967_0047933
385 Ga0466967_0055214
386 Ga0466967_0058138
387 Ga0495592_0034997
388 Ga0495603_0009680
389 Ga0495629_0008229
390 Ga0495629_0013095
391 Ga0495629_0043637
392 Ga0495629_0122586
393 Ga0495638_0051287
394 Ga0495651_0128407
395 Ga0495639_0003633
396 Ga0495639_0050979
397 Ga0495585_0052448
398 Ga0495594_0052768
399 Ga0495583_0007081
400 Ga0495606_0040657
401 Ga0495608_0026926
402 Ga0495616_0004578
403 Ga0495620_0000865
404 Ga0495620_0030537
405 Ga0495630_0018117
406 Ga0495631_0007720
407 Ga0495637_0036857
408 Ga0495643_0005320
409 Ga0495648_0070640
410 Ga0495666_0026071
411 Ga0495640_0065288
412 Ga0495586_0064222
413 Ga0495609_0011945
414 Ga0495597_0009458
415 Ga0495645_0030786
416 Ga0495622_0002765
417 Ga0495633_0010514
418 Ga0495634_0003056
419 Ga0495588_0077798
420 Ga0495657_0006750
421 Ga0495657_0017842
422 Ga0495657_0074508
423 Ga0495658_0063721
424 Ga0495613_0001114
425 Ga0495613_0006514
426 Ga0495613_0009894
427 Ga0495613_0022089
428 Ga0495613_0057081
429 Ga0495613_0066134
430 Ga0495624_0032916
431 Ga0495636_0005125
432 Ga0495636_0018863
433 Ga0495676_0024998
434 Ga0495680_0032498
435 Ga0495683_0051591
436 Ga0495687_003525
437 Ga0495675_0094971
438 Ga0495677_0041728
439 Ga0495685_028370
440 Ga0495681_0047952
441 Ga0495614_0033795
442 Ga0496100_0028898
443 Ga0496100_0044743
444 Ga0496102_0009920
445 Ga0496102_0012584
446 Ga0496102_0065081
447 Ga0496104_0002387
448 Ga0496105_0013305
449 Ga0496106_0042003
450 Ga0496107_0023383
451 Ga0496108_0054084
452 Ga0496108_0113131
453 Ga0496110_0040893
454 Ga0496110_0198535
455 Ga0496110_0206463
456 Ga0496111_0028126
457 Ga0496114_0012149
458 Ga0496114_0121758
459 Ga0496115_0017812
460 Ga0496115_0061784
461 Ga0496115_0074190
462 Ga0501034_0018248
463 Ga0501037_0015509
464 Ga0501037_0021782
465 Ga0501040_0158884
466 Ga0501043_0057689
467 Ga0501068_0000422
468 Ga0501068_0082739
469 Ga0501069_0000013
470 Ga0501070_0000012
471 Ga0501070_0030041
472 Ga0501071_0000264
473 Ga0501071_0009429
474 Ga0501071_0015152
475 Ga0501071_0052950
476 Ga0501071_0091883
477 Ga0501072_0008467
478 Ga0501072_0040671
479 Ga0501072_0124562
480 Ga0501073_0002248
481 Ga0501073_0020921
482 Ga0501074_0000337
483 Ga0501080_0011098
484 Ga0501080_0011897
485 Ga0501081_0071808
486 Ga0501083_0000308
487 Ga0501083_0008510
488 Ga0501045_0008854
489 Ga0501045_0033158
490 nmdc:mga0yw44_103492_c1
491 nmdc:mga06r32_42272_c1
492 Ga0495619_0013409
493 Ga0500566_0000593
494 Ga0501084_0035979
495 Ga0501084_0086748
496 Ga0530510_0087437
497 2528204831
498 2528216275
499 2546950178
500 2579750783
501 2616700951
502 2623499899
503 2643826587
504 2644229857
505 2644535625
506 2686543241
507 2710606211
508 2740167804
509 2774865982
510 2795792704
511 2862578690
512 2974318434
513 2984526644
514 637879498

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

422

497

0.98

PF00501

AMP-binding

AMP-binding enzyme

11

372

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
5bur-assembly1.cif.gz_B o-succinylbenzoate coenzyme a synthetase (mene) from bacillus subtilis, in complex with atp and magnesium ion 0.8934 10 398
3wv5-assembly2.cif.gz_B complex structure of vinn with 3-methylaspartate 0.8869 2 394
5zrn-assembly1.cif.gz_A inhibitor bound crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis 0.8841 6 399
3ipl-assembly3.cif.gz_C crystal structure of o-succinylbenzoic acid-coa ligase from staphylococcus aureus subsp. aureus mu50 0.8829 10 398
3ivr-assembly1.cif.gz_B crystal structure of putative long-chain-fatty-acid coa ligase from rhodopseudomonas palustris cga009 0.8828 4 396
ID Description Score Start End Superfamily
af_P69451_456_557_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9651 403 500 3.30.300.30
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9616 403 496 3.30.300.30
af_O05295_375_473_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9606 402 498 3.30.300.30
af_Q9LQS1_441_544_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9594 403 500 3.30.300.30
af_P96843_409_507_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9526 405 499 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A2K3LEK0-F1-model_v4 4-coumarate-CoA ligase 7-like protein 0.9546 411 496 GO:0016405
AF-A0A3D5MRC7-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9531 399 502 GO:0016405
AF-A0A838KQ73-F1-model_v4 Long-chain fatty acid--CoA ligase 0.9496 398 502 GO:0016877
AF-A0A2D9F669-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9391 404 503 GO:0006631
GO:0031956
AF-A0A7W2H3L2-F1-model_v4 AMP-dependent synthetase 0.9339 399 500 GO:0006631
GO:0031956

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