F366935

General Info

Members Datasets Scaffolds Average Seq Length
256 170 240 598

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2883068021|2883072829
Length 698
Sequence ASIKQAAAEAVQALYQQPFTAADVSVNTTKPEFEGEYTIVVFPFTKFSRQKPEETAGAIGTWLAEHHPALVAGFNVVKGFLNLSVHDQFWTSFVQNAHHNTNVGQQPANGKKVMVEYSSPNTNKPLHLGHLRNNFLGFSVSEILKANGFEVVKANLVNDRGIHICKSMLAWQLFAHGDTPESTGKKGDHLVGDYYVHFESILRDQAEPIISRVLEGNFGDFEGEQVEKLIKLHAALNKPEFKANVEKAEKLRHDIKALARTASAETKEVVSRIEKGDFSDFEGEDKARAKSLHQELTPAIKSDEEKADKIHDDIKELSRNRTEIMQQAKIMLQQWEAGNPEVRALWQTMNSWVYEGFEKTYKRLGIDFDKMYFESNTYLLGKDVVEEGLRKGVFFKKADNSVWIDLTADGLDEKLVLRGDGTSVYITQDIGTARLKYDDYHMDQSIYVVADEQNYHFKVLKLIMQKLGEPSADGIAHLSYGMVELPHGRMKSREGTVVDADDLVEEMVSTAAKYTEELGKVKDFTEEELRELYETIGLGAMKFFLLKVDPKKKMVFNPEESIDIHGFTGPFIQYSHARIRSILREFSAEDLAALASYRHNDALLPMEKELIKINEQFGEVLAEAGREMSPSVIANYAFLLAQTFNSFYAKKESGKYTYSVRDAENEDKRKLRLQIASLTANTIRQAMKLLGIRVPERM

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2738541278 Niastella sp. CF465 Isolate Unclassified
3 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
4 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
5 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
6 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
7 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
8 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
9 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
10 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
11 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
12 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
13 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
14 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
15 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
16 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
17 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
18 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
19 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
20 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
21 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
22 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
23 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
24 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
25 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
26 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
27 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
28 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
29 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
30 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
31 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
32 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
33 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
34 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
35 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
36 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
37 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
38 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
39 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
40 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
41 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
42 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
43 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
44 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
45 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
46 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
47 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
48 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
49 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
50 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
51 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
52 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
53 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
54 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
55 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
56 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
57 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
58 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
59 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
60 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
61 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
62 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
64 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
65 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
66 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
67 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
72 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
73 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
74 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
75 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
76 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
77 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
78 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
79 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
80 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
81 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
82 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
83 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
84 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
85 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
86 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
87 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
88 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
89 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
90 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
91 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
92 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
93 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
94 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
96 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
97 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
99 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
100 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
101 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
102 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
104 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
134 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
135 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
136 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
137 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
138 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
139 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
140 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
141 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
142 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
143 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
144 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
145 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
153 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
156 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
157 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
158 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
159 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
160 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
161 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
162 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
163 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
164 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
165 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
166 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
167 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
168 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
169 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
170 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.75
Metatranscriptomes 0
Isolates 6.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.19
Nodule 0
Rhizoplane 0.39
Rhizosphere 73.44
Stem 0
Stem Tuber 0
Unclassified 8.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_104926 2162886007 Bacteria 77416
2 JGI24740J21852_10000349 3300001979 Bacteria 19736
3 JGI25154J39366_1000014 3300002738 Bacteria 265287
4 JGI25153J46596_10011336 3300003215 Bacteria 3946
5 JGI25153J46596_10013617 3300003215 Bacteria 3426
6 rootH1_10015414 3300003316 Bacteria 3802
7 rootH2_10004718 3300003320 Bacteria 23099
8 rootH2_10053860 3300003320 Bacteria 13115
9 rootL2_10096232 3300003322 Bacteria 3140
10 rootL2_10112594 3300003322 Bacteria 4442
11 rootL2_10176697 3300003322 Bacteria 7455
12 rootH1_10200657 3300003323 Bacteria 8741
13 JGI25160J50197_1000337 3300003354 Bacteria 31907
14 JGI25160J50197_1003893 3300003354 Bacteria 6545
15 JGI25160J50197_1005917 3300003354 Bacteria 5023
16 JGI25160J50197_1007849 3300003354 Bacteria 4128
17 Ga0055535_1001066 3300003761 Bacteria 16874
18 Ga0055542_1004156 3300003762 Bacteria 3634
19 Ga0055528_1001909 3300003790 Bacteria 11827
20 Ga0055530_10005286 3300003791 Bacteria 6204
21 Ga0055531_10000055 3300003794 Bacteria 123621
22 Ga0055531_10013422 3300003794 Bacteria 3775
23 Ga0065165_1001274 3300005262 Bacteria 28506
24 Ga0065704_10070133 3300005289 Bacteria 1266035
25 Ga0065712_10076672 3300005290 Unclassified 3615
26 Ga0070658_10053794 3300005327 Bacteria 3268
27 Ga0070683_100027918 3300005329 Bacteria 5095
28 Ga0070683_100035665 3300005329 Bacteria 4546
29 Ga0070670_100015878 3300005331 Bacteria 6462
30 Ga0068869_100024012 3300005334 Bacteria 4219
31 Ga0070680_100006766 3300005336 Bacteria 8734
32 Ga0068868_100044096 3300005338 Bacteria 3486
33 Ga0070689_100055343 3300005340 Unclassified 3074
34 Ga0070689_100057834 3300005340 Bacteria 3010
35 Ga0070675_100005435 3300005354 Bacteria 9742
36 Ga0070675_100042898 3300005354 Unclassified 3696
37 Ga0070675_100064207 3300005354 Unclassified 3036
38 Ga0070671_100006760 3300005355 Bacteria 9178
39 Ga0070671_100120500 3300005355 Bacteria 2207
40 Ga0070674_100036719 3300005356 Bacteria 3291
41 Ga0070688_100023965 3300005365 Bacteria 3595
42 Ga0070659_100005813 3300005366 Bacteria 8883
43 Ga0070667_100013604 3300005367 Bacteria 6723
44 Ga0070667_100054343 3300005367 Bacteria 3381
45 Ga0070667_100083111 3300005367 Bacteria 2743
46 Ga0070662_100024617 3300005457 Bacteria 4149
47 Ga0070681_10073159 3300005458 Bacteria 3389
48 Ga0070679_100006200 3300005530 Bacteria 11134
49 Ga0070684_100001286 3300005535 Bacteria 17976
50 Ga0070684_100019845 3300005535 Bacteria 5569
51 Ga0070684_100075585 3300005535 Bacteria 2971
52 Ga0070686_100049724 3300005544 Bacteria 2662
53 Ga0070665_100000031 3300005548 Bacteria 333365
54 Ga0070665_100008213 3300005548 Bacteria 10568
55 Ga0070665_100104431 3300005548 Bacteria 2836
56 Ga0068855_100004244 3300005563 Bacteria 17503
57 Ga0068855_100047487 3300005563 Bacteria 5072
58 Ga0068855_100057151 3300005563 Bacteria 4574
59 Ga0070664_100035499 3300005564 Bacteria 4186
60 Ga0070664_100115281 3300005564 Bacteria 2348
61 Ga0068857_100023836 3300005577 Bacteria 5387
62 Ga0068857_100104081 3300005577 Bacteria 2548
63 Ga0068854_100019280 3300005578 Bacteria 4595
64 Ga0068852_100000942 3300005616 Bacteria 19231
65 Ga0068859_100003456 3300005617 Bacteria 16061
66 Ga0068859_100036641 3300005617 Bacteria 4924
67 Ga0068864_100050799 3300005618 Bacteria 3570
68 Ga0068864_100076653 3300005618 Bacteria 2922
69 Ga0068861_100030671 3300005719 Bacteria 3943
70 Ga0068860_100001991 3300005843 Bacteria 21550
71 Ga0068860_100085360 3300005843 Bacteria 3004
72 Ga0068862_100002344 3300005844 Bacteria 16864
73 Ga0097621_100000796 3300006237 Bacteria 22187
74 Ga0097621_100086889 3300006237 Bacteria 2610
75 Ga0068871_100000029 3300006358 Bacteria 77924
76 Ga0075430_100001390 3300006846 Bacteria 19650
77 Ga0075431_100050272 3300006847 Bacteria 4298
78 Ga0075429_100004820 3300006880 Bacteria 11618
79 Ga0075429_100008030 3300006880 Bacteria 9171
80 Ga0097620_100003456 3300006931 Bacteria 16061
81 Ga0097620_100036643 3300006931 Bacteria 4924
82 Ga0105240_10000047 3300009093 Bacteria 239067
83 Ga0105240_10001182 3300009093 Bacteria 45690
84 Ga0111539_10031448 3300009094 Bacteria 6447
85 Ga0114129_10024465 3300009147 Bacteria 8556
86 Ga0105243_10116284 3300009148 Bacteria 2246
87 Ga0105241_10000459 3300009174 Bacteria 30725
88 Ga0105241_10117307 3300009174 Bacteria 2139
89 Ga0105242_10037414 3300009176 Bacteria 3898
90 Ga0105248_10001215 3300009177 Bacteria 28759
91 Ga0105237_10017515 3300009545 Bacteria 7425
92 Ga0105238_10001407 3300009551 Bacteria 24111
93 Ga0105249_10003224 3300009553 Bacteria 14123
94 Ga0105249_10006375 3300009553 Bacteria 10260
95 Ga0105239_10001793 3300010375 Bacteria 28180
96 Ga0105239_10004762 3300010375 Bacteria 16108
97 Ga0105239_10025577 3300010375 Bacteria 6498
98 Ga0105239_10106065 3300010375 Bacteria 3112
99 Ga0105246_10110178 3300011119 Bacteria 2021
100 Ga0157371_10005684 3300013102 Bacteria 10456
101 Ga0157370_10001951 3300013104 Bacteria 25406
102 Ga0157370_10005347 3300013104 Bacteria 14416
103 Ga0157370_10005672 3300013104 Bacteria 13954
104 Ga0157374_10037550 3300013296 Bacteria 4447
105 Ga0157374_10056195 3300013296 Bacteria 3674
106 Ga0157378_10017992 3300013297 Bacteria 6204
107 Ga0157378_10020047 3300013297 Bacteria 5880
108 Ga0157378_10065362 3300013297 Bacteria 3256
109 Ga0157378_10207191 3300013297 Unclassified 1857
110 Ga0163162_10005537 3300013306 Bacteria 12206
111 Ga0163162_10008303 3300013306 Bacteria 10131
112 Ga0163162_10020716 3300013306 Bacteria 6463
113 Ga0163162_10056810 3300013306 Bacteria 3941
114 Ga0163162_10102415 3300013306 Bacteria 2956
115 Ga0157372_10002921 3300013307 Bacteria 18457
116 Ga0157372_10026040 3300013307 Bacteria 6362
117 Ga0157372_10027811 3300013307 Bacteria 6163
118 Ga0157372_10034749 3300013307 Bacteria 5545
119 Ga0157372_10068502 3300013307 Bacteria 3990
120 Ga0157375_10001329 3300013308 Bacteria 21304
121 Ga0157375_10007174 3300013308 Bacteria 9739
122 Ga0157375_10074313 3300013308 Bacteria 3420
123 Ga0163163_10000445 3300014325 Bacteria 37798
124 Ga0163163_10083645 3300014325 Bacteria 3197
125 Ga0157380_10001093 3300014326 Bacteria 17458
126 Ga0157377_10019166 3300014745 Bacteria 3572
127 Ga0157376_10002151 3300014969 Bacteria 13268
128 Ga0157376_10007017 3300014969 Bacteria 7994
129 Ga0157376_10008661 3300014969 Bacteria 7353
130 Ga0157376_10048329 3300014969 Bacteria 3517
131 Ga0182005_1000039 3300015265 Bacteria 155210
132 Ga0163161_10001556 3300017792 Bacteria 16932
133 Ga0163161_10007502 3300017792 Bacteria 7537
134 Ga0209436_102485 3300025208 Bacteria 5508
135 Ga0209436_103804 3300025208 Bacteria 3894
136 Ga0209258_100195 3300025242 Bacteria 124409
137 Ga0209646_1000002 3300025246 Bacteria 1425781
138 Ga0209026_1000611 3300025250 Bacteria 22913
139 Ga0209148_1000249 3300025254 Bacteria 85917
140 Ga0209673_1000261 3300025273 Bacteria 99491
141 Ga0209130_1002693 3300025284 Bacteria 8461
142 Ga0209564_1003066 3300025295 Bacteria 11866
143 Ga0209758_1002597 3300025297 Bacteria 18092
144 Ga0209758_1004528 3300025297 Bacteria 11505
145 Ga0209758_1015292 3300025297 Bacteria 3989
146 Ga0209050_1000577 3300025298 Bacteria 59430
147 Ga0207426_1000192 3300025302 Bacteria 151680
148 Ga0207426_1000448 3300025302 Bacteria 65983
149 Ga0207426_1001820 3300025302 Bacteria 15789
150 Ga0207426_1003630 3300025302 Bacteria 8166
151 Ga0209257_1000025 3300025304 Bacteria 724838
152 Ga0209257_1001838 3300025304 Bacteria 23154
153 Ga0207642_10009020 3300025899 Bacteria 3452
154 Ga0207688_10020403 3300025901 Bacteria 3618
155 Ga0207680_10056080 3300025903 Bacteria 2378
156 Ga0207647_10005327 3300025904 Bacteria 9453
157 Ga0207647_10044503 3300025904 Bacteria 2773
158 Ga0207647_10079030 3300025904 Bacteria 1975
159 Ga0207654_10002595 3300025911 Bacteria 9166
160 Ga0207707_10016153 3300025912 Bacteria 6512
161 Ga0207695_10000010 3300025913 Bacteria 981919
162 Ga0207695_10000077 3300025913 Bacteria 307107
163 Ga0207695_10000833 3300025913 Bacteria 57159
164 Ga0207695_10025764 3300025913 Bacteria 6575
165 Ga0207671_10000025 3300025914 Bacteria 271617
166 Ga0207671_10008912 3300025914 Bacteria 8449
167 Ga0207657_10016130 3300025919 Bacteria 7213
168 Ga0207657_10021766 3300025919 Bacteria 6025
169 Ga0207657_10046455 3300025919 Bacteria 3803
170 Ga0207652_10000871 3300025921 Bacteria 28598
171 Ga0207659_10009334 3300025926 Bacteria 6124
172 Ga0207659_10020344 3300025926 Bacteria 4386
173 Ga0207706_10005480 3300025933 Bacteria 11831
174 Ga0207670_10002458 3300025936 Bacteria 9717
175 Ga0207691_10100734 3300025940 Bacteria 2578
176 Ga0207689_10024979 3300025942 Bacteria 5008
177 Ga0207679_10028464 3300025945 Bacteria 3878
178 Ga0207667_10064102 3300025949 Bacteria 3838
179 Ga0207667_10097458 3300025949 Bacteria 3035
180 Ga0207651_10085455 3300025960 Bacteria 2289
181 Ga0207712_10003889 3300025961 Bacteria 9438
182 Ga0207658_10008928 3300025986 Bacteria 6798
183 Ga0207658_10052757 3300025986 Bacteria 3002
184 Ga0207648_10089256 3300026089 Bacteria 2692
185 Ga0207648_10096280 3300026089 Unclassified 2590
186 Ga0207648_10118330 3300026089 Bacteria 2329
187 Ga0207676_10038869 3300026095 Bacteria 3635
188 Ga0207676_10042794 3300026095 Bacteria 3484
189 Ga0207676_10077991 3300026095 Bacteria 2681
190 Ga0207674_10040587 3300026116 Bacteria 4820
191 Ga0207675_100009332 3300026118 Bacteria 9197
192 Ga0207683_10003149 3300026121 Bacteria 14417
193 Ga0207698_10009417 3300026142 Bacteria 6229
194 Ga0268266_10000088 3300028379 Bacteria 199029
195 Ga0268266_10006602 3300028379 Bacteria 10590
196 Ga0268264_10032242 3300028381 Bacteria 4298
197 Ga0268264_10039577 3300028381 Bacteria 3895
198 Ga0265327_10000010 3300031251 Bacteria 566817
199 Ga0265327_10000192 3300031251 Bacteria 129439
200 Ga0307416_100001580 3300032002 Bacteria 12492
201 Ga0395899_0012110 3300037312 Bacteria 6604
202 Ga0395898_0032237 3300037466 Bacteria 5229
203 Ga0466972_0016790 3300044658 Bacteria 3660
204 Ga0453684_0023466 3300044712 Bacteria 9082
205 Ga0466968_0017417 3300044735 Bacteria 2872
206 Ga0466957_0002742 3300044842 Bacteria 9530
207 Ga0495627_000481 3300046453 Bacteria 33758
208 Ga0495648_0000294 3300046524 Bacteria 55789
209 Ga0495633_0000005 3300046558 Bacteria 357644
210 Ga0495668_0000057 3300046616 Bacteria 196557
211 Ga0496101_0043358 3300048904 Bacteria 3216
212 Ga0496121_0000020 3300048924 Bacteria 498732
213 Ga0501032_0007367 3300049569 Bacteria 8039
214 Ga0501033_0097127 3300049570 Bacteria 2153
215 Ga0501034_0000225 3300049571 Bacteria 107163
216 Ga0501034_0007762 3300049571 Bacteria 11410
217 Ga0501034_0022063 3300049571 Bacteria 6486
218 Ga0501043_0005040 3300049579 Bacteria 10683
219 Ga0501047_0020147 3300049581 Bacteria 6403
220 Ga0501219_000090 3300049703 Bacteria 15687
221 Ga0501241_000557 3300049758 Bacteria 7987
222 Ga0501044_0018771 3300049823 Bacteria 7408
223 Ga0501044_0083146 3300049823 Bacteria 3238
224 Ga0501284_00028 3300050005 Bacteria 76036
225 nmdc:mga05p37_13307_c1 3300050507 Bacteria 9854
226 nmdc:mga09592_5505_c1 3300050508 Bacteria 10300
227 Ga0500644_0000234 3300053088 Bacteria 31420
228 Ga0500556_0008693 3300053104 Bacteria 2934
229 Ga0500562_000017 3300053108 Bacteria 130556
230 Ga0500569_000423 3300053109 Bacteria 6897
231 Ga0500607_018537 3300053121 Bacteria 3951
232 Ga0500642_0011069 3300053130 Bacteria 3211
233 Ga0500652_001242 3300053131 Bacteria 8091
234 Ga0500658_0017849 3300053134 Bacteria 2654
235 Ga0500577_0000592 3300053142 Bacteria 9336
236 Ga0500616_0010074 3300053153 Bacteria 5678
237 Ga0500622_0000321 3300053156 Bacteria 48260
238 Ga0500622_0001419 3300053156 Bacteria 19292
239 Ga0500622_0002108 3300053156 Bacteria 14826
240 Ga0500636_0010921 3300053177 Bacteria 5309

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300006880 Ga0075429_100004820 Ga0075429_1000048207 524
2 3300050508 nmdc:mga09592_5505_c1 nmdc:mga09592_5505_c1_3570_5462 524
3 3300049571 Ga0501034_0000225 Ga0501034_0000225_90883_92952 530
4 3300044842 Ga0466957_0002742 Ga0466957_0002742_6610_8490 531
5 3300005355 Ga0070671_100120500 Ga0070671_1001205001 533
6 3300005367 Ga0070667_100054343 Ga0070667_1000543432 533
7 3300005367 Ga0070667_100083111 Ga0070667_1000831112 533
8 3300005544 Ga0070686_100049724 Ga0070686_1000497242 533
9 3300005548 Ga0070665_100104431 Ga0070665_1001044312 533
10 3300005564 Ga0070664_100035499 Ga0070664_1000354993 533
11 3300005578 Ga0068854_100019280 Ga0068854_1000192801 533
12 3300005617 Ga0068859_100036641 Ga0068859_1000366413 533
13 3300006931 Ga0097620_100036643 Ga0097620_1000366435 533
14 3300010375 Ga0105239_10106065 Ga0105239_101060653 533
15 3300013296 Ga0157374_10037550 Ga0157374_100375503 533
16 3300013306 Ga0163162_10008303 Ga0163162_100083033 533
17 3300013308 Ga0157375_10007174 Ga0157375_100071748 533
18 3300014325 Ga0163163_10083645 Ga0163163_100836452 533
19 3300014969 Ga0157376_10002151 Ga0157376_1000215111 533
20 3300017792 Ga0163161_10007502 Ga0163161_100075025 533
21 3300025903 Ga0207680_10056080 Ga0207680_100560802 533
22 3300025960 Ga0207651_10085455 Ga0207651_100854551 533
23 3300026095 Ga0207676_10042794 Ga0207676_100427942 533
24 3300026121 Ga0207683_10003149 Ga0207683_100031497 533
25 3300005338 Ga0068868_100044096 Ga0068868_1000440963 534
26 3300026089 Ga0207648_10118330 Ga0207648_101183302 534
27 3300046524 Ga0495648_0000294 Ga0495648_0000294_44492_46441 535
28 3300053130 Ga0500642_0011069 Ga0500642_0011069_463_2412 535
29 3300053156 Ga0500622_0002108 Ga0500622_0002108_3540_5489 535
30 3300005457 Ga0070662_100024617 Ga0070662_1000246172 536
31 3300006846 Ga0075430_100001390 Ga0075430_10000139020 536
32 3300006847 Ga0075431_100050272 Ga0075431_1000502722 536
33 3300006880 Ga0075429_100008030 Ga0075429_1000080303 536
34 3300014969 Ga0157376_10048329 Ga0157376_100483292 536
35 3300025986 Ga0207658_10052757 Ga0207658_100527572 536
36 3300031251 Ga0265327_10000192 Ga0265327_10000192115 538
37 3300049703 Ga0501219_000090 Ga0501219_000090_7183_9072 538
38 3300050005 Ga0501284_00028 Ga0501284_00028_29750_31639 538
39 3300005329 Ga0070683_100035665 Ga0070683_1000356653 542
40 3300005331 Ga0070670_100015878 Ga0070670_1000158782 542
41 3300005334 Ga0068869_100024012 Ga0068869_1000240123 542
42 3300005340 Ga0070689_100057834 Ga0070689_1000578343 542
43 3300005365 Ga0070688_100023965 Ga0070688_1000239653 542
44 3300005535 Ga0070684_100001286 Ga0070684_10000128612 542
45 3300005577 Ga0068857_100104081 Ga0068857_1001040812 542
46 3300005618 Ga0068864_100076653 Ga0068864_1000766533 542
47 3300014745 Ga0157377_10019166 Ga0157377_100191661 542
48 3300025904 Ga0207647_10044503 Ga0207647_100445032 542
49 3300025926 Ga0207659_10020344 Ga0207659_100203443 542
50 3300025936 Ga0207670_10002458 Ga0207670_100024582 542
51 3300025942 Ga0207689_10024979 Ga0207689_100249793 542
52 3300025945 Ga0207679_10028464 Ga0207679_100284643 542
53 3300026095 Ga0207676_10077991 Ga0207676_100779911 542
54 3300005719 Ga0068861_100030671 Ga0068861_1000306714 543
55 3300026118 Ga0207675_100009332 Ga0207675_1000093324 543
56 3300025919 Ga0207657_10046455 Ga0207657_100464552 545
57 3300025940 Ga0207691_10100734 Ga0207691_101007342 545
58 3300014325 Ga0163163_10000445 Ga0163163_1000044533 549
59 3300005548 Ga0070665_100000031 Ga0070665_100000031126 551
60 3300028379 Ga0268266_10000088 Ga0268266_1000008819 551
61 3300003354 JGI25160J50197_1005917 JGI25160J50197_10059172 552
62 3300005535 Ga0070684_100075585 Ga0070684_1000755851 552
63 3300005563 Ga0068855_100057151 Ga0068855_1000571512 552
64 3300025302 Ga0207426_1000192 Ga0207426_1000192106 552
65 3300005844 Ga0068862_100002344 Ga0068862_1000023442 553
66 3300009174 Ga0105241_10117307 Ga0105241_101173071 553
67 3300028381 Ga0268264_10039577 Ga0268264_100395772 553
68 3300003322 rootL2_10096232 rootL2_100962321 554
69 3300009147 Ga0114129_10024465 Ga0114129_100244658 554
70 3300009545 Ga0105237_10017515 Ga0105237_100175151 554
71 3300050507 nmdc:mga05p37_13307_c1 nmdc:mga05p37_13307_c1_5295_7130 554
72 3300025899 Ga0207642_10009020 Ga0207642_100090202 556
73 3300048924 Ga0496121_0000020 Ga0496121_0000020_49038_50960 556
74 3300003320 rootH2_10053860 rootH2_100538606 557
75 3300009093 Ga0105240_10001182 Ga0105240_1000118222 558
76 3300009174 Ga0105241_10000459 Ga0105241_1000045911 558
77 3300009551 Ga0105238_10001407 Ga0105238_1000140712 558
78 3300010375 Ga0105239_10025577 Ga0105239_100255771 558
79 3300013307 Ga0157372_10068502 Ga0157372_100685022 558
80 3300025911 Ga0207654_10002595 Ga0207654_100025952 558
81 3300025913 Ga0207695_10000833 Ga0207695_1000083344 558
82 3300025914 Ga0207671_10008912 Ga0207671_100089122 558
83 3300044658 Ga0466972_0016790 Ga0466972_0016790_71_2017 558
84 3300044735 Ga0466968_0017417 Ga0466968_0017417_303_2249 558
85 3300053108 Ga0500562_000017 Ga0500562_000017_44043_45839 560
86 3300005290 Ga0065712_10076672 Ga0065712_100766723 561
87 3300005354 Ga0070675_100042898 Ga0070675_1000428982 561
88 3300009553 Ga0105249_10003224 Ga0105249_100032243 561
89 3300014326 Ga0157380_10001093 Ga0157380_100010939 561
90 3300025926 Ga0207659_10009334 Ga0207659_100093343 561
91 3300025961 Ga0207712_10003889 Ga0207712_100038897 561
92 3300003322 rootL2_10176697 rootL2_101766977 562
93 3300046616 Ga0495668_0000057 Ga0495668_0000057_73941_75722 563
94 3300001979 JGI24740J21852_10000349 JGI24740J21852_1000034917 564
95 3300002738 JGI25154J39366_1000014 JGI25154J39366_1000014225 564
96 3300025246 Ga0209646_1000002 Ga0209646_1000002901 564
97 3300025250 Ga0209026_1000611 Ga0209026_10006118 564
98 3300053131 Ga0500652_001242 Ga0500652_001242_1360_3291 564
99 3300013306 Ga0163162_10102415 Ga0163162_101024151 565
100 3300032002 Ga0307416_100001580 Ga0307416_1000015806 565
101 3300003215 JGI25153J46596_10011336 JGI25153J46596_100113361 566
102 3300003215 JGI25153J46596_10013617 JGI25153J46596_100136171 566
103 3300003354 JGI25160J50197_1000337 JGI25160J50197_100033711 566
104 3300003354 JGI25160J50197_1003893 JGI25160J50197_10038935 566
105 3300003354 JGI25160J50197_1007849 JGI25160J50197_10078492 566
106 3300003790 Ga0055528_1001909 Ga0055528_10019094 566
107 3300003794 Ga0055531_10013422 Ga0055531_100134222 566
108 3300005262 Ga0065165_1001274 Ga0065165_10012744 566
109 3300011119 Ga0105246_10110178 Ga0105246_101101781 566
110 3300025208 Ga0209436_102485 Ga0209436_1024854 566
111 3300025273 Ga0209673_1000261 Ga0209673_100026139 566
112 3300025284 Ga0209130_1002693 Ga0209130_10026934 566
113 3300025295 Ga0209564_1003066 Ga0209564_10030666 566
114 3300025297 Ga0209758_1002597 Ga0209758_100259714 566
115 3300025297 Ga0209758_1004528 Ga0209758_10045289 566
116 3300025297 Ga0209758_1015292 Ga0209758_10152923 566
117 3300025298 Ga0209050_1000577 Ga0209050_100057715 566
118 3300025302 Ga0207426_1000448 Ga0207426_100044848 566
119 3300025302 Ga0207426_1001820 Ga0207426_10018206 566
120 3300025302 Ga0207426_1003630 Ga0207426_10036307 566
121 3300025304 Ga0209257_1001838 Ga0209257_100183817 566
122 3300003791 Ga0055530_10005286 Ga0055530_100052863 567
123 3300005355 Ga0070671_100006760 Ga0070671_1000067606 567
124 3300005563 Ga0068855_100004244 Ga0068855_10000424414 567
125 3300005563 Ga0068855_100047487 Ga0068855_1000474872 567
126 3300006237 Ga0097621_100000796 Ga0097621_1000007969 567
127 3300006358 Ga0068871_100000029 Ga0068871_10000002950 567
128 3300009177 Ga0105248_10001215 Ga0105248_100012159 567
129 3300013102 Ga0157371_10005684 Ga0157371_100056845 567
130 3300013104 Ga0157370_10005672 Ga0157370_100056725 567
131 3300013297 Ga0157378_10065362 Ga0157378_100653623 567
132 3300013306 Ga0163162_10005537 Ga0163162_100055379 567
133 3300013307 Ga0157372_10002921 Ga0157372_1000292111 567
134 3300013308 Ga0157375_10001329 Ga0157375_100013293 567
135 3300017792 Ga0163161_10001556 Ga0163161_100015565 567
136 3300025912 Ga0207707_10016153 Ga0207707_100161533 567
137 3300025949 Ga0207667_10064102 Ga0207667_100641023 567
138 3300025949 Ga0207667_10097458 Ga0207667_100974583 567
139 3300037312 Ga0395899_0012110 Ga0395899_0012110_2056_3846 567
140 3300037466 Ga0395898_0032237 Ga0395898_0032237_398_2188 567
141 3300048904 Ga0496101_0043358 Ga0496101_0043358_1410_3188 567
142 3300049569 Ga0501032_0007367 Ga0501032_0007367_3579_5351 567
143 3300049570 Ga0501033_0097127 Ga0501033_0097127_275_2047 567
144 3300049571 Ga0501034_0007762 Ga0501034_0007762_8452_10224 567
145 3300049579 Ga0501043_0005040 Ga0501043_0005040_7450_9222 567
146 3300049823 Ga0501044_0018771 Ga0501044_0018771_4613_6385 567
147 3300005577 Ga0068857_100023836 Ga0068857_1000238363 568
148 3300049581 Ga0501047_0020147 Ga0501047_0020147_20_1792 568
149 3300003323 rootH1_10200657 rootH1_102006579 570
150 3300005367 Ga0070667_100013604 Ga0070667_1000136044 570
151 3300005843 Ga0068860_100001991 Ga0068860_1000019914 570
152 3300015265 Ga0182005_1000039 Ga0182005_100003930 570
153 3300025208 Ga0209436_103804 Ga0209436_1038042 570
154 3300025986 Ga0207658_10008928 Ga0207658_100089285 570
155 3300028381 Ga0268264_10032242 Ga0268264_100322423 570
156 3300046453 Ga0495627_000481 Ga0495627_000481_22298_24226 571
157 3300046558 Ga0495633_0000005 Ga0495633_0000005_225075_227003 571
158 3300010375 Ga0105239_10001793 Ga0105239_1000179313 572
159 3300013306 Ga0163162_10020716 Ga0163162_100207163 572
160 3300025913 Ga0207695_10000077 Ga0207695_100000778 572
161 3300049823 Ga0501044_0083146 Ga0501044_0083146_1146_3077 572
162 3300053109 Ga0500569_000423 Ga0500569_000423_1472_3400 572
163 3300053134 Ga0500658_0017849 Ga0500658_0017849_204_2132 572
164 3300053142 Ga0500577_0000592 Ga0500577_0000592_1152_3080 572
165 3300053153 Ga0500616_0010074 Ga0500616_0010074_1672_3600 572
166 3300003316 rootH1_10015414 rootH1_100154143 573
167 3300003322 rootL2_10112594 rootL2_101125943 573
168 3300003761 Ga0055535_1001066 Ga0055535_100106613 573
169 3300003762 Ga0055542_1004156 Ga0055542_10041564 573
170 3300003794 Ga0055531_10000055 Ga0055531_1000005573 573
171 3300025242 Ga0209258_100195 Ga0209258_10019579 573
172 3300025254 Ga0209148_1000249 Ga0209148_100024952 573
173 3300025304 Ga0209257_1000025 Ga0209257_1000025368 573
174 3300053088 Ga0500644_0000234 Ga0500644_0000234_25127_27055 573
175 3300053121 Ga0500607_018537 Ga0500607_018537_1893_3821 573
176 3300053177 Ga0500636_0010921 Ga0500636_0010921_3085_5013 573
177 3300003320 rootH2_10004718 rootH2_100047189 574
178 3300005843 Ga0068860_100085360 Ga0068860_1000853601 574
179 3300009148 Ga0105243_10116284 Ga0105243_101162841 574
180 3300009176 Ga0105242_10037414 Ga0105242_100374143 574
181 3300013297 Ga0157378_10207191 Ga0157378_102071911 574
182 3300026089 Ga0207648_10089256 Ga0207648_100892561 574
183 3300053156 Ga0500622_0001419 Ga0500622_0001419_10539_12326 575
184 3300044712 Ga0453684_0023466 Ga0453684_0023466_6892_8838 577
185 3300053104 Ga0500556_0008693 Ga0500556_0008693_760_2544 577
186 3300005548 Ga0070665_100008213 Ga0070665_1000082138 579
187 3300025913 Ga0207695_10025764 Ga0207695_100257645 579
188 3300028379 Ga0268266_10006602 Ga0268266_100066024 579
189 3300013104 Ga0157370_10005347 Ga0157370_100053473 581
190 3300005327 Ga0070658_10053794 Ga0070658_100537941 584
191 3300005329 Ga0070683_100027918 Ga0070683_1000279183 584
192 3300005336 Ga0070680_100006766 Ga0070680_1000067663 584
193 3300005354 Ga0070675_100005435 Ga0070675_1000054355 584
194 3300005366 Ga0070659_100005813 Ga0070659_1000058132 584
195 3300005530 Ga0070679_100006200 Ga0070679_1000062002 584
196 3300005535 Ga0070684_100019845 Ga0070684_1000198452 584
197 3300005616 Ga0068852_100000942 Ga0068852_10000094212 584
198 3300006237 Ga0097621_100086889 Ga0097621_1000868892 584
199 3300013297 Ga0157378_10020047 Ga0157378_100200473 584
200 3300013307 Ga0157372_10034749 Ga0157372_100347493 584
201 3300025904 Ga0207647_10079030 Ga0207647_100790301 584
202 3300025919 Ga0207657_10016130 Ga0207657_100161301 584
203 3300025919 Ga0207657_10021766 Ga0207657_100217663 584
204 3300025921 Ga0207652_10000871 Ga0207652_100008715 584
205 3300025933 Ga0207706_10005480 Ga0207706_100054801 584
206 3300026142 Ga0207698_10009417 Ga0207698_100094174 584
207 iso_pu_bacteria 2738541278 2738730380 585
208 3300005617 Ga0068859_100003456 Ga0068859_1000034563 586
209 3300005618 Ga0068864_100050799 Ga0068864_1000507993 586
210 3300006931 Ga0097620_100003456 Ga0097620_1000034563 586
211 3300013104 Ga0157370_10001951 Ga0157370_1000195116 586
212 3300053156 Ga0500622_0000321 Ga0500622_0000321_39589_41517 586
213 3300005458 Ga0070681_10073159 Ga0070681_100731593 587
214 3300010375 Ga0105239_10004762 Ga0105239_100047628 587
215 3300026116 Ga0207674_10040587 Ga0207674_100405872 587
216 3300049758 Ga0501241_000557 Ga0501241_000557_3364_5292 587
217 3300005340 Ga0070689_100055343 Ga0070689_1000553432 589
218 3300005354 Ga0070675_100064207 Ga0070675_1000642072 589
219 3300005356 Ga0070674_100036719 Ga0070674_1000367191 589
220 3300005564 Ga0070664_100115281 Ga0070664_1001152811 589
221 3300009094 Ga0111539_10031448 Ga0111539_100314485 589
222 3300013296 Ga0157374_10056195 Ga0157374_100561954 589
223 3300013297 Ga0157378_10017992 Ga0157378_100179923 589
224 3300013307 Ga0157372_10026040 Ga0157372_100260402 589
225 3300025901 Ga0207688_10020403 Ga0207688_100204032 589
226 3300026089 Ga0207648_10096280 Ga0207648_100962801 589
227 iso_pu_bacteria 2818991442 2819574000 589
228 iso_pu_bacteria 2818991460 2819680344 589
229 iso_pu_bacteria 2821136567 2821137315 589
230 iso_pu_bacteria 2884791551 2884798251 589
231 iso_pu_bacteria 2904467357 2904467944 589
232 iso_pu_bacteria 2929177148 2929182638 589
233 iso_pu_bacteria 2945977869 2945978563 589
234 iso_pu_bacteria 2946013367 2946015575 589
235 3300009553 Ga0105249_10006375 Ga0105249_100063753 590
236 3300014969 Ga0157376_10008661 Ga0157376_100086612 590
237 iso_pu_bacteria 2929239360 2929241628 590
238 3300013306 Ga0163162_10056810 Ga0163162_100568103 591
239 3300013308 Ga0157375_10074313 Ga0157375_100743132 591
240 3300014969 Ga0157376_10007017 Ga0157376_100070174 591
241 3300026095 Ga0207676_10038869 Ga0207676_100388692 591
242 iso_pu_bacteria 2840677318 2840677395 591
243 iso_pu_bacteria 2883068021 2883072829 591
244 iso_pu_bacteria 2896085136 2896085213 591
245 iso_pu_bacteria 2896109856 2896115142 591
246 iso_pu_bacteria 2929921140 2929923585 591
247 3300049571 Ga0501034_0022063 Ga0501034_0022063_30_1961 595
248 iso_pu_bacteria 8003151029 8003157480 595
249 3300031251 Ga0265327_10000010 Ga0265327_10000010197 598
250 2162886007 SwRhRL2b_contig_104926 SwRhRL2b_0327.00003470 599
251 3300005289 Ga0065704_10070133 Ga0065704_10070133699 599
252 3300009093 Ga0105240_10000047 Ga0105240_1000004787 599
253 3300013307 Ga0157372_10027811 Ga0157372_100278112 599
254 3300025904 Ga0207647_10005327 Ga0207647_100053273 599
255 3300025913 Ga0207695_10000010 Ga0207695_10000010152 599
256 3300025914 Ga0207671_10000025 Ga0207671_1000002544 599

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05746

DALR_1

DALR anticodon binding domain

572

698

0.92

PF00750

tRNA-synt_1d

tRNA synthetases class I (R)

283

557

0.88

PF00750

tRNA-synt_1d

tRNA synthetases class I (R)

93

228

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ao8-assembly1.cif.gz_A crystal structure of arginyl-trna_synthetase from neisseria gonorrhoeae in complex with arginine 0.8809 1 599
6ao8-assembly1.cif.gz_A crystal structure of arginyl-trna_synthetase from neisseria gonorrhoeae in complex with arginine 0.8765 1 599
5yym-assembly1.cif.gz_A crystal structures of e.coli arginyl-trna synthetase (argrs) in complex with substrate arg 0.8749 1 599
5yym-assembly2.cif.gz_B crystal structures of e.coli arginyl-trna synthetase (argrs) in complex with substrate arg 0.867 1 599
5yym-assembly1.cif.gz_A crystal structures of e.coli arginyl-trna synthetase (argrs) in complex with substrate arg 0.8622 1 599
ID Description Score Start End Superfamily
af_P11875_454_577_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9322 471 599 1.10.730.10
af_P38714_519_643_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.926 471 599 1.10.730.10
af_P11875_454_577_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.925 471 599 1.10.730.10
af_P38714_519_643_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9189 471 599 1.10.730.10
af_Q05506_483_607_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9136 471 599 1.10.730.10
ID Description Score Start End GO Terms
AF-A9DIM0-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS) 0.9724 1 599 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-A9DIM0-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS) 0.9708 1 599 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-A0A4P5SZ28-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS) 0.9687 1 599 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-A0A359B0M7-F1-model_v4 Arginine--tRNA ligase 0.9685 272 354 GO:0016874
AF-A0A2D7VSF8-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) 0.9676 77 599 GO:0004814
GO:0005524
GO:0005737
GO:0006420

Feature Viewer

pLDDT pTM Quality
92.51 0.9 High
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Predicted Structure (AlphaFold2)

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