F366305

General Info

Members Datasets Scaffolds Average Seq Length
256 157 512 612

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100041772|Ga0070707_1000417723
Length 646
Sequence MISYHPNDSPITTALPSPTYYTVVMPSSRNSAIATKNPTTVANALRRNVAIIAHVDHGKTTLVDALLHQSGAFRSNERVAERAMDSNELERERGITILAKNTAVHYHDILINIVDTPGHADFGGEVERTLSMVDGVVLLVDASEGPLPQTRFVLGKAFSRGLPPIVVINKIDRPDARASEVLNEIFDLFIDLDASDAQLDFPVIYTNAKRGTAALEAATAGVDLRPLFDAIVSHVPPPMGSPDSPLQILIANLDSSDYLGRIAVGRIFNGRVKLGDEVAVCSPSKPEARKAKISKMFSFDGLKRIEIDSASAGDIICLAGMPDITIGETVTEVERQAPVPVVAIDEPTVSIVFGVNTSPVAGREGQYVTSRQVRDRLERELIGNVSIRLENTDSPEAINVVGRGELQLSILIEMMRREGFELQASRPQIVTKEIDGKRFEPVEDLIIDVPEDFQGVVIAQTGGRKGTMTKMINHGSGRVRMEFRIPARGLIGFRSQFLTDTRGTGIMNHLFAGWEPWHGAIPARATGALVSDRTGVATAYAIANLQERGEIFIDPGTVVYEGMIIGENARPSDMDVNVTREKKQTNMRASSADEAIRLIPPRILGLEQAIEFINEDELVEITPKSIRLRKRILAANQRPKRTDREA

Samples

Sample ID Description Type Environment
1 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
73 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
75 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
76 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
77 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
78 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
83 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
84 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
85 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
86 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
87 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
88 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
89 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
90 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
91 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
92 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
93 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
94 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
95 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
96 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
97 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
98 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
99 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
102 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
103 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
104 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
107 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
108 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
111 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
112 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
135 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
136 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
137 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
138 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
139 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
145 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
146 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
147 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
148 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
149 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
150 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
151 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
152 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
153 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
154 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
155 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
156 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
157 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.91
Nodule 0
Rhizoplane 5.08
Rhizosphere 91.02
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070707_100041772 3300005468 Bacteria 4390
2 JGI24751J29686_10000854 3300002459 Bacteria 7029
3 Ga0065712_10072753 3300005290 Bacteria 4629
4 Ga0065712_10073952 3300005290 Bacteria 4227
5 Ga0065712_10074759 3300005290 Bacteria 4017
6 Ga0065715_10093434 3300005293 Bacteria 4683
7 Ga0065715_10137989 3300005293 Bacteria 1898
8 Ga0065707_10004213 3300005295 Bacteria 4570
9 Ga0065707_10005027 3300005295 Bacteria 4237
10 Ga0070683_100086404 3300005329 Bacteria 2941
11 Ga0070690_100034877 3300005330 Bacteria 3155
12 Ga0070666_10015848 3300005335 Bacteria 4815
13 Ga0070689_100011669 3300005340 Bacteria 6302
14 Ga0070661_100025134 3300005344 Bacteria 4278
15 Ga0070669_100011871 3300005353 Bacteria 6180
16 Ga0070675_100000227 3300005354 Bacteria 36055
17 Ga0070675_100033851 3300005354 Bacteria 4144
18 Ga0070675_100091884 3300005354 Bacteria 2543
19 Ga0070671_100083325 3300005355 Bacteria 2674
20 Ga0070673_100031163 3300005364 Bacteria 3999
21 Ga0070688_100047194 3300005365 Bacteria 2670
22 Ga0070714_100086836 3300005435 Bacteria 2734
23 Ga0070694_100011065 3300005444 Bacteria 5584
24 Ga0070708_100013200 3300005445 Bacteria 6758
25 Ga0068867_100043915 3300005459 Bacteria 3273
26 Ga0070698_100006574 3300005471 Bacteria 12608
27 Ga0070698_100012179 3300005471 Bacteria 9111
28 Ga0070698_100195790 3300005471 Bacteria 1958
29 Ga0070679_100035092 3300005530 Bacteria 4975
30 Ga0070684_100007386 3300005535 Bacteria 8544
31 Ga0070672_100028223 3300005543 Bacteria 4195
32 Ga0070686_100004212 3300005544 Bacteria 7919
33 Ga0070695_100003940 3300005545 Bacteria 8666
34 Ga0070665_100001801 3300005548 Bacteria 24297
35 Ga0070664_100007132 3300005564 Bacteria 9013
36 Ga0070664_100052362 3300005564 Bacteria 3457
37 Ga0068854_100005133 3300005578 Bacteria 8253
38 Ga0068859_100012660 3300005617 Bacteria 8481
39 Ga0068859_100022211 3300005617 Bacteria 6362
40 Ga0068859_100076587 3300005617 Bacteria 3386
41 Ga0068864_100004180 3300005618 Bacteria 11866
42 Ga0068864_100029875 3300005618 Bacteria 4619
43 Ga0068863_100013247 3300005841 Bacteria 7955
44 Ga0068863_100084283 3300005841 Bacteria 3012
45 Ga0068858_100001040 3300005842 Bacteria 28671
46 Ga0068858_100058001 3300005842 Bacteria 3579
47 Ga0068862_100006670 3300005844 Bacteria 9578
48 Ga0068862_100061698 3300005844 Bacteria 3223
49 Ga0081539_10008974 3300005985 Bacteria 8507
50 Ga0075365_10082638 3300006038 Bacteria 2178
51 Ga0075364_10052236 3300006051 Bacteria 2671
52 Ga0097621_100001726 3300006237 Bacteria 14936
53 Ga0097621_100027838 3300006237 Bacteria 4449
54 Ga0097621_100099302 3300006237 Bacteria 2447
55 Ga0068871_100018257 3300006358 Bacteria 5328
56 Ga0075428_100007460 3300006844 Bacteria 12117
57 Ga0075431_100086043 3300006847 Bacteria 3244
58 Ga0075431_100161311 3300006847 Bacteria 2305
59 Ga0075433_10040393 3300006852 Bacteria 4038
60 Ga0075433_10055410 3300006852 Bacteria 3461
61 Ga0075433_10059033 3300006852 Bacteria 3356
62 Ga0075433_10101016 3300006852 Bacteria 2554
63 Ga0075434_100001641 3300006871 Bacteria 19027
64 Ga0075434_100002214 3300006871 Bacteria 16957
65 Ga0075434_100074817 3300006871 Bacteria 3380
66 Ga0068865_100032109 3300006881 Bacteria 3505
67 Ga0075436_100002552 3300006914 Bacteria 12537
68 Ga0075436_100003213 3300006914 Bacteria 11203
69 Ga0097620_100012660 3300006931 Bacteria 8481
70 Ga0097620_100022211 3300006931 Bacteria 6362
71 Ga0097620_100076591 3300006931 Bacteria 3386
72 Ga0075435_100000057 3300007076 Bacteria 58158
73 Ga0075435_100001348 3300007076 Bacteria 15817
74 Ga0075435_100028301 3300007076 Bacteria 4394
75 Ga0105240_10146173 3300009093 Bacteria 2820
76 Ga0111539_10000359 3300009094 Bacteria 56038
77 Ga0111539_10005392 3300009094 Bacteria 16537
78 Ga0111539_10007148 3300009094 Bacteria 14311
79 Ga0111539_10025174 3300009094 Bacteria 7295
80 Ga0111539_10030401 3300009094 Bacteria 6564
81 Ga0114129_10000047 3300009147 Bacteria 104957
82 Ga0114129_10003139 3300009147 Bacteria 23192
83 Ga0114129_10007167 3300009147 Bacteria 15869
84 Ga0114129_10012283 3300009147 Bacteria 12184
85 Ga0114129_10018466 3300009147 Bacteria 9934
86 Ga0114129_10020326 3300009147 Bacteria 9445
87 Ga0114129_10020830 3300009147 Bacteria 9314
88 Ga0114129_10033924 3300009147 Bacteria 7209
89 Ga0105248_10005820 3300009177 Bacteria 13548
90 Ga0105248_10026467 3300009177 Bacteria 6454
91 Ga0105248_10030703 3300009177 Bacteria 6002
92 Ga0105248_10036287 3300009177 Bacteria 5514
93 Ga0105248_10045711 3300009177 Bacteria 4909
94 Ga0105248_10086412 3300009177 Bacteria 3529
95 Ga0105248_10094586 3300009177 Bacteria 3365
96 Ga0105248_10134925 3300009177 Bacteria 2784
97 Ga0105249_10004369 3300009553 Bacteria 12223
98 Ga0157374_10064668 3300013296 Bacteria 3434
99 Ga0163163_10000071 3300014325 Bacteria 112778
100 Ga0163163_10003520 3300014325 Bacteria 13291
101 Ga0163163_10008419 3300014325 Bacteria 9163
102 Ga0163163_10009645 3300014325 Bacteria 8635
103 Ga0163163_10022656 3300014325 Bacteria 5952
104 Ga0207682_10020975 3300025893 Bacteria 2569
105 Ga0207688_10008701 3300025901 Bacteria 5524
106 Ga0207680_10029418 3300025903 Bacteria 3086
107 Ga0207649_10022607 3300025920 Bacteria 3634
108 Ga0207652_10067070 3300025921 Bacteria 3111
109 Ga0207681_10002020 3300025923 Bacteria 13039
110 Ga0207659_10000289 3300025926 Bacteria 30497
111 Ga0207659_10023093 3300025926 Bacteria 4148
112 Ga0207686_10024769 3300025934 Bacteria 3482
113 Ga0207704_10010058 3300025938 Bacteria 4594
114 Ga0207691_10017579 3300025940 Bacteria 6777
115 Ga0207711_10016628 3300025941 Bacteria 6109
116 Ga0207711_10069179 3300025941 Bacteria 3059
117 Ga0207661_10080315 3300025944 Bacteria 2691
118 Ga0207679_10008986 3300025945 Bacteria 6385
119 Ga0207651_10023883 3300025960 Bacteria 3770
120 Ga0207640_10011769 3300025981 Bacteria 4963
121 Ga0207703_10047500 3300026035 Bacteria 3461
122 Ga0207678_10016343 3300026067 Bacteria 6515
123 Ga0207641_10000550 3300026088 Bacteria 42009
124 Ga0207428_10003408 3300027907 Bacteria 15445
125 Ga0207428_10007753 3300027907 Bacteria 9769
126 Ga0207428_10016959 3300027907 Bacteria 6258
127 Ga0268265_10032330 3300028380 Bacteria 3790
128 Ga0265330_10000001 3300031235 Bacteria 499696
129 Ga0265332_10000007 3300031238 Bacteria 319429
130 Ga0265328_10004249 3300031239 Bacteria 6233
131 Ga0265329_10001380 3300031242 Bacteria 11784
132 Ga0265339_10004454 3300031249 Bacteria 9555
133 Ga0265316_10000004 3300031344 Bacteria 310897
134 Ga0307408_100024691 3300031548 Bacteria 4108
135 Ga0265314_10000004 3300031711 Bacteria 939480
136 Ga0265342_10000004 3300031712 Bacteria 266556
137 Ga0307410_10015138 3300031852 Bacteria 4566
138 Ga0307406_10038552 3300031901 Bacteria 2959
139 Ga0307407_10009479 3300031903 Bacteria 4537
140 Ga0307409_100026281 3300031995 Bacteria 4102
141 Ga0307409_100093909 3300031995 Bacteria 2466
142 Ga0373930_0000875 3300034816 Bacteria 4304
143 Ga0373959_0001019 3300034820 Bacteria 4616
144 Ga0373938_0000412 3300034957 Bacteria 6896
145 Ga0373928_0000458 3300035084 Bacteria 8048
146 Ga0373929_0001457 3300035085 Bacteria 4511
147 Ga0373949_0000461 3300035090 Bacteria 14026
148 Ga0373951_0000323 3300035091 Bacteria 14899
149 Ga0373939_0001144 3300035114 Bacteria 6485
150 Ga0373941_0000919 3300035115 Bacteria 6066
151 Ga0373954_0004695 3300035118 Bacteria 5890
152 Ga0373954_0033840 3300035118 Bacteria 2365
153 Ga0373960_0000006 3300035121 Bacteria 28659
154 Ga0373961_0000904 3300035241 Bacteria 9943
155 Ga0373931_0008286 3300035691 Bacteria 4924
156 Ga0373937_0003521 3300036401 Bacteria 13174
157 Ga0439433_0003417 3300041999 Bacteria 3407
158 Ga0439446_0007795 3300042156 Bacteria 2822
159 Ga0450908_005287 3300042184 Bacteria 2476
160 Ga0439435_0003335 3300042436 Bacteria 3328
161 Ga0451576_0008826 3300045051 Bacteria 11779
162 Ga0451576_0044029 3300045051 Bacteria 4707
163 Ga0495592_0019292 3300046454 Bacteria 5188
164 Ga0495638_0012627 3300046460 Bacteria 5780
165 Ga0495580_0088969 3300046472 Bacteria 2150
166 Ga0495628_0091062 3300046516 Bacteria 2361
167 Ga0495645_0001180 3300046543 Bacteria 17820
168 Ga0495658_0063580 3300046683 Bacteria 2124
169 Ga0495684_0071657 3300047471 Bacteria 2633
170 Ga0496104_0000864 3300048907 Bacteria 26091
171 Ga0496105_0005155 3300048908 Bacteria 9909
172 Ga0496108_0007059 3300048911 Bacteria 9095
173 Ga0496109_0009263 3300048912 Bacteria 8386
174 Ga0496109_0097308 3300048912 Bacteria 2728
175 Ga0496110_0000814 3300048913 Bacteria 21856
176 Ga0496111_0002963 3300048914 Bacteria 10398
177 Ga0496112_0008689 3300048915 Bacteria 9108
178 Ga0496112_0016027 3300048915 Bacteria 7007
179 Ga0496112_0027873 3300048915 Bacteria 5449
180 Ga0496112_0035692 3300048915 Bacteria 4846
181 Ga0496113_0044364 3300048916 Bacteria 3294
182 Ga0496114_0046522 3300048917 Bacteria 3606
183 Ga0501034_0038816 3300049571 Bacteria 4823
184 Ga0501034_0057203 3300049571 Bacteria 3921
185 Ga0501036_0037842 3300049572 Bacteria 4081
186 Ga0501036_0060228 3300049572 Bacteria 3216
187 Ga0501039_0032823 3300049575 Bacteria 4004
188 Ga0501039_0089105 3300049575 Bacteria 2404
189 Ga0501041_0023477 3300049577 Bacteria 3699
190 Ga0501047_0040940 3300049581 Bacteria 4479
191 Ga0501071_0018713 3300049587 Bacteria 4802
192 Ga0501071_0065683 3300049587 Bacteria 2635
193 Ga0501071_0078671 3300049587 Bacteria 2410
194 Ga0501072_0023881 3300049588 Bacteria 4751
195 Ga0501075_0037192 3300049591 Bacteria 3635
196 Ga0501075_0064574 3300049591 Bacteria 2761
197 Ga0501077_0045019 3300049593 Bacteria 2803
198 Ga0501079_0053531 3300049741 Bacteria 3114
199 Ga0501081_0010141 3300049743 Bacteria 6147
200 Ga0501044_0001487 3300049823 Bacteria 27460
201 Ga0501044_0034046 3300049823 Bacteria 5347
202 Ga0501045_0002323 3300049824 Bacteria 12900
203 nmdc:mga03n38_27474_c1 3300050490 Bacteria 2361
204 nmdc:mga00v17_4029_c1 3300050491 Bacteria 7592
205 nmdc:mga0yw44_89563_c1 3300050492 Bacteria 1942
206 nmdc:mga04h51_10981_c1 3300050495 Bacteria 2503
207 nmdc:mga07m45_20034_c1 3300050496 Bacteria 3630
208 nmdc:mga07m45_25088_c1 3300050496 Bacteria 3268
209 nmdc:mga05p37_102327_c1 3300050507 Bacteria 3528
210 nmdc:mga05p37_11068_c1 3300050507 Bacteria 10717
211 nmdc:mga05p37_23941_c1 3300050507 Bacteria 4596
212 nmdc:mga05p37_25488_c1 3300050507 Bacteria 7192
213 nmdc:mga05p37_447_c1 3300050507 Bacteria 44801
214 nmdc:mga05p37_62308_c1 3300050507 Bacteria 4590
215 nmdc:mga05p37_67722_c1 3300050507 Bacteria 4392
216 nmdc:mga05p37_6912_c1 3300050507 Bacteria 13372
217 nmdc:mga06r32_19730_c1 3300050510 Bacteria 6195
218 nmdc:mga06r32_28896_c1 3300050510 Bacteria 5191
219 nmdc:mga06r32_62003_c1 3300050510 Bacteria 3601
220 nmdc:mga06r32_9097_c1 3300050510 Bacteria 8954
221 nmdc:mga08y16_17944_c1 3300050511 Bacteria 7455
222 nmdc:mga08y16_302_c1 3300050511 Bacteria 44383
223 nmdc:mga08y16_44299_c1 3300050511 Bacteria 4662
224 nmdc:mga08y16_6654_c1 3300050511 Bacteria 4675
225 nmdc:mga08y16_85701_c1 3300050511 Bacteria 3283
226 nmdc:mga0n895_114878_c1 3300050512 Bacteria 2710
227 nmdc:mga0n895_12185_c1 3300050512 Bacteria 7701
228 nmdc:mga0n895_38_c1 3300050512 Bacteria 76202
229 nmdc:mga0n895_47815_c1 3300050512 Bacteria 4185
230 nmdc:mga0n895_69892_c1 3300050512 Bacteria 3479
231 nmdc:mga0rr50_1043_c1 3300050513 Bacteria 15036
232 nmdc:mga0rr50_2_c1 3300050513 Bacteria 373938
233 nmdc:mga0rr50_31147_c1 3300050513 Bacteria 3785
234 nmdc:mga0rr50_37209_c1 3300050513 Bacteria 3511
235 nmdc:mga08x19_1993_c1 3300050514 Bacteria 12495
236 nmdc:mga08x19_24700_c1 3300050514 Bacteria 3738
237 nmdc:mga08x19_27878_c1 3300050514 Bacteria 3535
238 nmdc:mga08x19_31974_c1 3300050514 Bacteria 3315
239 nmdc:mga08x19_795_c1 3300050514 Bacteria 20152
240 nmdc:mga0a205_15125_c1 3300050515 Bacteria 7207
241 nmdc:mga0a205_46883_c1 3300050515 Bacteria 4169
242 nmdc:mga0a205_54069_c1 3300050515 Bacteria 3876
243 nmdc:mga0a205_76002_c1 3300050515 Bacteria 3245
244 Ga0495612_0045196 3300053078 Bacteria 1803
245 Ga0495619_0007563 3300053085 Bacteria 6879
246 Ga0495619_0077972 3300053085 Bacteria 2227
247 Ga0500641_0003420 3300053096 Bacteria 5610
248 Ga0500568_0001454 3300053139 Bacteria 15172
249 Ga0501084_0000357 3300054114 Bacteria 34859
250 Ga0590071_002600 3300059421 Bacteria 4542
251 Ga0590074_000336 3300059423 Bacteria 6531
252 Ga0590075_000261 3300059424 Bacteria 14832
253 Ga0590077_000799 3300059426 Bacteria 8154
254 Ga0501082_0018345 3300060353 Bacteria 6025
255 Ga0530510_0019887 3300061734 Bacteria 4771
256 Ga0530510_0023962 3300061734 Bacteria 4353
257 Ga0070707_100041772
258 JGI24751J29686_10000854
259 Ga0065712_10072753
260 Ga0065712_10073952
261 Ga0065712_10074759
262 Ga0065715_10093434
263 Ga0065715_10137989
264 Ga0065707_10004213
265 Ga0065707_10005027
266 Ga0070683_100086404
267 Ga0070690_100034877
268 Ga0070666_10015848
269 Ga0070689_100011669
270 Ga0070661_100025134
271 Ga0070669_100011871
272 Ga0070675_100000227
273 Ga0070675_100033851
274 Ga0070675_100091884
275 Ga0070671_100083325
276 Ga0070673_100031163
277 Ga0070688_100047194
278 Ga0070714_100086836
279 Ga0070694_100011065
280 Ga0070708_100013200
281 Ga0068867_100043915
282 Ga0070698_100006574
283 Ga0070698_100012179
284 Ga0070698_100195790
285 Ga0070679_100035092
286 Ga0070684_100007386
287 Ga0070672_100028223
288 Ga0070686_100004212
289 Ga0070695_100003940
290 Ga0070665_100001801
291 Ga0070664_100007132
292 Ga0070664_100052362
293 Ga0068854_100005133
294 Ga0068859_100012660
295 Ga0068859_100022211
296 Ga0068859_100076587
297 Ga0068864_100004180
298 Ga0068864_100029875
299 Ga0068863_100013247
300 Ga0068863_100084283
301 Ga0068858_100001040
302 Ga0068858_100058001
303 Ga0068862_100006670
304 Ga0068862_100061698
305 Ga0081539_10008974
306 Ga0075365_10082638
307 Ga0075364_10052236
308 Ga0097621_100001726
309 Ga0097621_100027838
310 Ga0097621_100099302
311 Ga0068871_100018257
312 Ga0075428_100007460
313 Ga0075431_100086043
314 Ga0075431_100161311
315 Ga0075433_10040393
316 Ga0075433_10055410
317 Ga0075433_10059033
318 Ga0075433_10101016
319 Ga0075434_100001641
320 Ga0075434_100002214
321 Ga0075434_100074817
322 Ga0068865_100032109
323 Ga0075436_100002552
324 Ga0075436_100003213
325 Ga0097620_100012660
326 Ga0097620_100022211
327 Ga0097620_100076591
328 Ga0075435_100000057
329 Ga0075435_100001348
330 Ga0075435_100028301
331 Ga0105240_10146173
332 Ga0111539_10000359
333 Ga0111539_10005392
334 Ga0111539_10007148
335 Ga0111539_10025174
336 Ga0111539_10030401
337 Ga0114129_10000047
338 Ga0114129_10003139
339 Ga0114129_10007167
340 Ga0114129_10012283
341 Ga0114129_10018466
342 Ga0114129_10020326
343 Ga0114129_10020830
344 Ga0114129_10033924
345 Ga0105248_10005820
346 Ga0105248_10026467
347 Ga0105248_10030703
348 Ga0105248_10036287
349 Ga0105248_10045711
350 Ga0105248_10086412
351 Ga0105248_10094586
352 Ga0105248_10134925
353 Ga0105249_10004369
354 Ga0157374_10064668
355 Ga0163163_10000071
356 Ga0163163_10003520
357 Ga0163163_10008419
358 Ga0163163_10009645
359 Ga0163163_10022656
360 Ga0207682_10020975
361 Ga0207688_10008701
362 Ga0207680_10029418
363 Ga0207649_10022607
364 Ga0207652_10067070
365 Ga0207681_10002020
366 Ga0207659_10000289
367 Ga0207659_10023093
368 Ga0207686_10024769
369 Ga0207704_10010058
370 Ga0207691_10017579
371 Ga0207711_10016628
372 Ga0207711_10069179
373 Ga0207661_10080315
374 Ga0207679_10008986
375 Ga0207651_10023883
376 Ga0207640_10011769
377 Ga0207703_10047500
378 Ga0207678_10016343
379 Ga0207641_10000550
380 Ga0207428_10003408
381 Ga0207428_10007753
382 Ga0207428_10016959
383 Ga0268265_10032330
384 Ga0265330_10000001
385 Ga0265332_10000007
386 Ga0265328_10004249
387 Ga0265329_10001380
388 Ga0265339_10004454
389 Ga0265316_10000004
390 Ga0307408_100024691
391 Ga0265314_10000004
392 Ga0265342_10000004
393 Ga0307410_10015138
394 Ga0307406_10038552
395 Ga0307407_10009479
396 Ga0307409_100026281
397 Ga0307409_100093909
398 Ga0373930_0000875
399 Ga0373959_0001019
400 Ga0373938_0000412
401 Ga0373928_0000458
402 Ga0373929_0001457
403 Ga0373949_0000461
404 Ga0373951_0000323
405 Ga0373939_0001144
406 Ga0373941_0000919
407 Ga0373954_0004695
408 Ga0373954_0033840
409 Ga0373960_0000006
410 Ga0373961_0000904
411 Ga0373931_0008286
412 Ga0373937_0003521
413 Ga0439433_0003417
414 Ga0439446_0007795
415 Ga0450908_005287
416 Ga0439435_0003335
417 Ga0451576_0008826
418 Ga0451576_0044029
419 Ga0495592_0019292
420 Ga0495638_0012627
421 Ga0495580_0088969
422 Ga0495628_0091062
423 Ga0495645_0001180
424 Ga0495658_0063580
425 Ga0495684_0071657
426 Ga0496104_0000864
427 Ga0496105_0005155
428 Ga0496108_0007059
429 Ga0496109_0009263
430 Ga0496109_0097308
431 Ga0496110_0000814
432 Ga0496111_0002963
433 Ga0496112_0008689
434 Ga0496112_0016027
435 Ga0496112_0027873
436 Ga0496112_0035692
437 Ga0496113_0044364
438 Ga0496114_0046522
439 Ga0501034_0038816
440 Ga0501034_0057203
441 Ga0501036_0037842
442 Ga0501036_0060228
443 Ga0501039_0032823
444 Ga0501039_0089105
445 Ga0501041_0023477
446 Ga0501047_0040940
447 Ga0501071_0018713
448 Ga0501071_0065683
449 Ga0501071_0078671
450 Ga0501072_0023881
451 Ga0501075_0037192
452 Ga0501075_0064574
453 Ga0501077_0045019
454 Ga0501079_0053531
455 Ga0501081_0010141
456 Ga0501044_0001487
457 Ga0501044_0034046
458 Ga0501045_0002323
459 nmdc:mga03n38_27474_c1
460 nmdc:mga00v17_4029_c1
461 nmdc:mga0yw44_89563_c1
462 nmdc:mga04h51_10981_c1
463 nmdc:mga07m45_20034_c1
464 nmdc:mga07m45_25088_c1
465 nmdc:mga05p37_102327_c1
466 nmdc:mga05p37_11068_c1
467 nmdc:mga05p37_23941_c1
468 nmdc:mga05p37_25488_c1
469 nmdc:mga05p37_447_c1
470 nmdc:mga05p37_62308_c1
471 nmdc:mga05p37_67722_c1
472 nmdc:mga05p37_6912_c1
473 nmdc:mga06r32_19730_c1
474 nmdc:mga06r32_28896_c1
475 nmdc:mga06r32_62003_c1
476 nmdc:mga06r32_9097_c1
477 nmdc:mga08y16_17944_c1
478 nmdc:mga08y16_302_c1
479 nmdc:mga08y16_44299_c1
480 nmdc:mga08y16_6654_c1
481 nmdc:mga08y16_85701_c1
482 nmdc:mga0n895_114878_c1
483 nmdc:mga0n895_12185_c1
484 nmdc:mga0n895_38_c1
485 nmdc:mga0n895_47815_c1
486 nmdc:mga0n895_69892_c1
487 nmdc:mga0rr50_1043_c1
488 nmdc:mga0rr50_2_c1
489 nmdc:mga0rr50_31147_c1
490 nmdc:mga0rr50_37209_c1
491 nmdc:mga08x19_1993_c1
492 nmdc:mga08x19_24700_c1
493 nmdc:mga08x19_27878_c1
494 nmdc:mga08x19_31974_c1
495 nmdc:mga08x19_795_c1
496 nmdc:mga0a205_15125_c1
497 nmdc:mga0a205_46883_c1
498 nmdc:mga0a205_54069_c1
499 nmdc:mga0a205_76002_c1
500 Ga0495612_0045196
501 Ga0495619_0007563
502 Ga0495619_0077972
503 Ga0500641_0003420
504 Ga0500568_0001454
505 Ga0501084_0000357
506 Ga0590071_002600
507 Ga0590074_000336
508 Ga0590075_000261
509 Ga0590077_000799
510 Ga0501082_0018345
511 Ga0530510_0019887
512 Ga0530510_0023962

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21018

BipA_C

TypA/BipA C-terminal domain

526

635

0.98

PF00679

EFG_C

Elongation factor G C-terminus

437

525

0.97

PF00009

GTP_EFTU

Elongation factor Tu GTP binding domain

44

237

0.95

PF03144

GTP_EFTU_D2

Elongation factor Tu domain 2

260

331

0.92

PF22042

EF-G_D2

Elongation factor G domain 2

245

333

0.92

PF01926

MMR_HSR1

50S ribosome-binding GTPase

48

170

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
7oya-assembly1.cif.gz_v2 cryo-em structure of the 1 hpf zebrafish embryo 80s ribosome 0.9075 405 476
3e3x-assembly1.cif.gz_A-2 the c-terminal part of bipa protein from vibrio parahaemolyticus rimd 2210633 0.8771 305 609
3e3x-assembly1.cif.gz_A-2 the c-terminal part of bipa protein from vibrio parahaemolyticus rimd 2210633 0.8743 305 609
4zck-assembly1.cif.gz_A crystal structure of c-terminal fragment of escherichia coli bipa/typa 0.8481 309 597
4zck-assembly1.cif.gz_A crystal structure of c-terminal fragment of escherichia coli bipa/typa 0.8196 309 597
ID Description Score Start End Superfamily
af_Q2G1Y6_202_302_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.995 204 301 2.40.30.10
af_G3K3T1_274_374_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9829 203 301 2.40.30.10
4zciA02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9787 203 301 2.40.30.10
3e3xA03 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);bipa protein 0.9693 485 562 2.40.50.250
af_Q9USZ1_675_770_3.30.70.240 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9687 401 478 3.30.70.240
ID Description Score Start End GO Terms
AF-A0A812IU49-F1-model_v4 BipA protein 0.9815 95 176 GO:0003924
GO:0005525
GO:0005829
GO:1990904
AF-A0A0B4EE04-F1-model_v4 GTP-binding protein TypA 0.9794 62 207 GO:0003924
GO:0005525
GO:0005829
GO:1990904
AF-A0A2T2R510-F1-model_v4 Elongation factor 4 0.9731 398 477 GO:0003746
GO:0005525
GO:0016787
GO:0043022
GO:0045727
AF-A0A0B4EE04-F1-model_v4 GTP-binding protein TypA 0.9728 62 207 GO:0003924
GO:0005525
GO:0005829
GO:1990904
AF-A0A6M1CL62-F1-model_v4 deleted 0.9721 122 269

Map