F365438

General Info

Members Datasets Scaffolds Average Seq Length
255 141 255 431

Family's Representative Sequence

Representative Sequence 3300005334|Ga0068869_100038325|Ga0068869_1000383252
Length 453
Sequence MKCDIKGQNIFIQSEIKTIQMKRSKYISLIIATVMTIFLYSCKKDYGNLNSPTVEEFLDNATPTDLNILVSGTESGMRNSMGLYLDDVSTIGREGYRFSGSEPRYLSDLLGANDAELSSSNFYITNTWAARYRAVKNCNVLIQAANNSKLISAAEKNGYIGFARTVKAYQLLLNLNLTYSNGIRVNVSDPDNLGGFVSYDEGLSAIASLLDSAKTDFGGASVTFPLAGFAGLDDAAGLLKVNRAIAARVAAYRSQWADVLTDLNESFFDLAGDFYLGVYHAFGTGSGDQINPLFIPQNNNGEIRLAHPSFAADIAANDDRIAKATLRQSVASLSGLSSDRDVWIYTSSTAPMPFIRNEELILLYAEAKIQTNSLPDAIVALNVIRDGHNLIPYAGAVTQPALITEMLNQKRYSLFYEGHRWIDLRRYDRLNELPIDRTGDDIWDEFPLPVTEN

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
68 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
104 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
105 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
106 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
107 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
114 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
115 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
116 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
117 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
118 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
119 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
120 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
121 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
122 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
123 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
134 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
139 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
140 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.96
Nodule 0
Rhizoplane 0
Rhizosphere 94.51
Stem 0
Stem Tuber 0
Unclassified 3.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10004568 3300003320 Bacteria 60983
2 rootH2_10007197 3300003320 Bacteria 152995
3 rootL2_10026796 3300003322 Bacteria 7436
4 rootL2_10064553 3300003322 Bacteria 6520
5 rootH1_10242349 3300003323 Unclassified 2100
6 JGI25160J50197_1003086 3300003354 Bacteria 7601
7 Ga0070658_10000058 3300005327 Bacteria 113042
8 Ga0070658_10031222 3300005327 Bacteria 4277
9 Ga0070676_10003968 3300005328 Bacteria 7762
10 Ga0070683_100003637 3300005329 Bacteria 12561
11 Ga0070683_100139604 3300005329 Unclassified 2295
12 Ga0070670_100121770 3300005331 Bacteria 2250
13 Ga0068869_100038325 3300005334 Bacteria 3415
14 Ga0068869_100049438 3300005334 Bacteria 3044
15 Ga0070666_10049688 3300005335 Bacteria 2819
16 Ga0070666_10094563 3300005335 Bacteria 2056
17 Ga0070682_100019346 3300005337 Bacteria 3994
18 Ga0068868_100006082 3300005338 Bacteria 8522
19 Ga0068868_100084194 3300005338 Bacteria 2554
20 Ga0068868_100094271 3300005338 Bacteria 2415
21 Ga0070660_100014513 3300005339 Bacteria 5678
22 Ga0070661_100020640 3300005344 Bacteria 4698
23 Ga0070661_100249156 3300005344 Bacteria 1370
24 Ga0070668_100118520 3300005347 Bacteria 2113
25 Ga0070675_100077750 3300005354 Bacteria 2762
26 Ga0070671_100021052 3300005355 Bacteria 5324
27 Ga0070674_100112151 3300005356 Bacteria 2004
28 Ga0070673_100029069 3300005364 Bacteria 4118
29 Ga0070673_100080673 3300005364 Bacteria 2637
30 Ga0070667_100064491 3300005367 Bacteria 3108
31 Ga0070667_100069443 3300005367 Unclassified 2998
32 Ga0070667_100072682 3300005367 Bacteria 2931
33 Ga0070678_100002806 3300005456 Bacteria 9627
34 Ga0070678_100016154 3300005456 Bacteria 4766
35 Ga0070662_100011533 3300005457 Bacteria 5833
36 Ga0068867_100004560 3300005459 Bacteria 9744
37 Ga0068867_100098534 3300005459 Bacteria 2229
38 Ga0070685_10106125 3300005466 Bacteria 1723
39 Ga0070684_100005417 3300005535 Bacteria 9776
40 Ga0068853_100016071 3300005539 Bacteria 6155
41 Ga0068853_100016459 3300005539 Bacteria 6085
42 Ga0070665_100000003 3300005548 Bacteria 811857
43 Ga0070665_100312843 3300005548 Bacteria 1574
44 Ga0068855_100001221 3300005563 Bacteria 31892
45 Ga0068855_100012811 3300005563 Bacteria 10117
46 Ga0068855_100017173 3300005563 Bacteria 8707
47 Ga0068855_100076739 3300005563 Bacteria 3877
48 Ga0070664_100017883 3300005564 Bacteria 5821
49 Ga0068857_100098617 3300005577 Bacteria 2621
50 Ga0068857_100197742 3300005577 Bacteria 1832
51 Ga0068856_100001417 3300005614 Bacteria 25141
52 Ga0068856_100025197 3300005614 Bacteria 5795
53 Ga0068852_100000515 3300005616 Bacteria 25446
54 Ga0068859_100000006 3300005617 Bacteria 421509
55 Ga0068859_100009998 3300005617 Bacteria 9568
56 Ga0068864_100002292 3300005618 Bacteria 15821
57 Ga0068864_100043067 3300005618 Bacteria 3864
58 Ga0068864_100174607 3300005618 Bacteria 1961
59 Ga0068864_100230628 3300005618 Bacteria 1712
60 Ga0068866_10062361 3300005718 Bacteria 1939
61 Ga0068863_100028915 3300005841 Bacteria 5293
62 Ga0068858_100000396 3300005842 Bacteria 45694
63 Ga0068860_100000208 3300005843 Bacteria 92818
64 Ga0068860_100001991 3300005843 Bacteria 21550
65 Ga0068860_100006943 3300005843 Bacteria 11349
66 Ga0068860_100082278 3300005843 Bacteria 3062
67 Ga0075366_10010113 3300006195 Bacteria 5289
68 Ga0097621_100001004 3300006237 Bacteria 19846
69 Ga0097621_100002007 3300006237 Bacteria 13897
70 Ga0097621_100043888 3300006237 Bacteria 3605
71 Ga0068871_100000091 3300006358 Bacteria 52582
72 Ga0068871_100000196 3300006358 Bacteria 41550
73 Ga0068871_100013577 3300006358 Bacteria 6047
74 Ga0068871_100025582 3300006358 Bacteria 4595
75 Ga0068871_100027150 3300006358 Bacteria 4474
76 Ga0068871_100050488 3300006358 Bacteria 3365
77 Ga0068871_100222266 3300006358 Bacteria 1637
78 Ga0068865_100000022 3300006881 Bacteria 102976
79 Ga0068865_100008918 3300006881 Bacteria 6204
80 Ga0068865_100226579 3300006881 Bacteria 1464
81 Ga0097620_100000006 3300006931 Bacteria 421509
82 Ga0097620_100009998 3300006931 Bacteria 9568
83 Ga0105240_10000008 3300009093 Bacteria 618862
84 Ga0105240_10003142 3300009093 Bacteria 25991
85 Ga0105240_10297260 3300009093 Bacteria 1848
86 Ga0111539_10046449 3300009094 Bacteria 5193
87 Ga0111539_10070214 3300009094 Bacteria 4135
88 Ga0105247_10003209 3300009101 Bacteria 10774
89 Ga0105241_10006479 3300009174 Bacteria 8629
90 Ga0105241_10007247 3300009174 Bacteria 8163
91 Ga0105242_10015004 3300009176 Bacteria 6006
92 Ga0105242_10093679 3300009176 Bacteria 2533
93 Ga0105237_10001396 3300009545 Bacteria 31901
94 Ga0105237_10001888 3300009545 Bacteria 26745
95 Ga0105237_10020298 3300009545 Bacteria 6854
96 Ga0105237_10040807 3300009545 Bacteria 4680
97 Ga0105237_10317025 3300009545 Bacteria 1562
98 Ga0105238_10017681 3300009551 Bacteria 7249
99 Ga0105238_10254049 3300009551 Unclassified 1736
100 Ga0105249_10013337 3300009553 Bacteria 7256
101 Ga0105249_10272753 3300009553 Bacteria 1686
102 Ga0105239_10000721 3300010375 Bacteria 46920
103 Ga0105246_10009305 3300011119 Bacteria 6050
104 Ga0157373_10020127 3300013100 Bacteria 4854
105 Ga0157371_10000959 3300013102 Bacteria 31997
106 Ga0157371_10052657 3300013102 Bacteria 2891
107 Ga0157370_10003210 3300013104 Bacteria 19329
108 Ga0157370_10215535 3300013104 Bacteria 1779
109 Ga0157374_10000003 3300013296 Bacteria 854471
110 Ga0157374_10005869 3300013296 Bacteria 10371
111 Ga0157374_10012422 3300013296 Bacteria 7408
112 Ga0157374_10053333 3300013296 Bacteria 3770
113 Ga0157374_10072268 3300013296 Bacteria 3254
114 Ga0157374_10082134 3300013296 Bacteria 3059
115 Ga0157374_10119132 3300013296 Bacteria 2546
116 Ga0157378_10001999 3300013297 Bacteria 18236
117 Ga0157378_10006773 3300013297 Bacteria 10007
118 Ga0157378_10008669 3300013297 Bacteria 8850
119 Ga0157378_10064721 3300013297 Bacteria 3271
120 Ga0157378_10240258 3300013297 Bacteria 1730
121 Ga0163162_10000064 3300013306 Bacteria 103542
122 Ga0163162_10000434 3300013306 Bacteria 38574
123 Ga0163162_10001062 3300013306 Bacteria 25506
124 Ga0163162_10018743 3300013306 Bacteria 6783
125 Ga0163162_10022513 3300013306 Bacteria 6210
126 Ga0163162_10028152 3300013306 Bacteria 5558
127 Ga0163162_10029296 3300013306 Bacteria 5447
128 Ga0163162_10127022 3300013306 Bacteria 2657
129 Ga0163162_10146199 3300013306 Unclassified 2480
130 Ga0163162_10155242 3300013306 Bacteria 2408
131 Ga0163162_10330707 3300013306 Unclassified 1656
132 Ga0157372_10042582 3300013307 Bacteria 5023
133 Ga0157372_10276216 3300013307 Bacteria 1953
134 Ga0157375_10004557 3300013308 Bacteria 12039
135 Ga0157375_10005783 3300013308 Bacteria 10757
136 Ga0157375_10028828 3300013308 Bacteria 5211
137 Ga0157375_10098865 3300013308 Bacteria 2996
138 Ga0157375_10112870 3300013308 Bacteria 2818
139 Ga0157375_10127637 3300013308 Bacteria 2660
140 Ga0157375_10248235 3300013308 Bacteria 1940
141 Ga0163163_10000694 3300014325 Bacteria 28641
142 Ga0157380_10001444 3300014326 Bacteria 15561
143 Ga0157379_10020530 3300014968 Bacteria 5842
144 Ga0157379_10052786 3300014968 Bacteria 3631
145 Ga0157376_10000420 3300014969 Bacteria 27624
146 Ga0157376_10002481 3300014969 Bacteria 12484
147 Ga0157376_10020890 3300014969 Bacteria 5074
148 Ga0157376_10058903 3300014969 Bacteria 3219
149 Ga0157376_10068576 3300014969 Bacteria 3004
150 Ga0163161_10006992 3300017792 Bacteria 7803
151 Ga0163161_10068751 3300017792 Unclassified 2588
152 Ga0213872_10003463 3300021361 Bacteria 8765
153 Ga0207426_1000105 3300025302 Bacteria 247269
154 Ga0207710_10025709 3300025900 Bacteria 2541
155 Ga0207688_10016824 3300025901 Bacteria 3970
156 Ga0207680_10027468 3300025903 Bacteria 3169
157 Ga0207680_10079202 3300025903 Bacteria 2060
158 Ga0207680_10096364 3300025903 Bacteria 1892
159 Ga0207645_10000613 3300025907 Bacteria 29540
160 Ga0207645_10004901 3300025907 Bacteria 9816
161 Ga0207643_10044944 3300025908 Bacteria 2494
162 Ga0207705_10000090 3300025909 Bacteria 113233
163 Ga0207654_10001964 3300025911 Bacteria 10651
164 Ga0207695_10000021 3300025913 Bacteria 679399
165 Ga0207695_10013372 3300025913 Bacteria 9794
166 Ga0207671_10000799 3300025914 Bacteria 39903
167 Ga0207671_10017503 3300025914 Bacteria 5522
168 Ga0207671_10022740 3300025914 Bacteria 4736
169 Ga0207671_10032185 3300025914 Bacteria 3904
170 Ga0207671_10033053 3300025914 Bacteria 3850
171 Ga0207671_10097127 3300025914 Bacteria 2227
172 Ga0207694_10012221 3300025924 Bacteria 6472
173 Ga0207650_10017803 3300025925 Bacteria 4977
174 Ga0207644_10063849 3300025931 Bacteria 2675
175 Ga0207644_10079829 3300025931 Bacteria 2415
176 Ga0207706_10006551 3300025933 Bacteria 10787
177 Ga0207669_10078410 3300025937 Bacteria 2105
178 Ga0207704_10000011 3300025938 Bacteria 180140
179 Ga0207704_10065422 3300025938 Bacteria 2276
180 Ga0207691_10016919 3300025940 Bacteria 6918
181 Ga0207689_10006834 3300025942 Bacteria 10032
182 Ga0207689_10032422 3300025942 Bacteria 4347
183 Ga0207689_10150892 3300025942 Bacteria 1915
184 Ga0207661_10073773 3300025944 Bacteria 2796
185 Ga0207661_10078516 3300025944 Bacteria 2718
186 Ga0207679_10190581 3300025945 Bacteria 1704
187 Ga0207667_10009633 3300025949 Bacteria 11362
188 Ga0207667_10018420 3300025949 Bacteria 7831
189 Ga0207667_10079356 3300025949 Bacteria 3402
190 Ga0207651_10039035 3300025960 Bacteria 3127
191 Ga0207712_10054495 3300025961 Bacteria 2809
192 Ga0207712_10079741 3300025961 Bacteria 2379
193 Ga0207658_10047999 3300025986 Bacteria 3128
194 Ga0207658_10060069 3300025986 Bacteria 2835
195 Ga0207677_10008527 3300026023 Bacteria 5733
196 Ga0207677_10055787 3300026023 Bacteria 2704
197 Ga0207677_10146940 3300026023 Bacteria 1813
198 Ga0207703_10005846 3300026035 Bacteria 9852
199 Ga0207639_10070903 3300026041 Bacteria 2724
200 Ga0207702_10079171 3300026078 Bacteria 2847
201 Ga0207702_10337337 3300026078 Bacteria 1439
202 Ga0207641_10125688 3300026088 Bacteria 2295
203 Ga0207648_10001059 3300026089 Bacteria 30821
204 Ga0207648_10051267 3300026089 Bacteria 3607
205 Ga0207676_10006644 3300026095 Bacteria 8175
206 Ga0207676_10211551 3300026095 Bacteria 1721
207 Ga0207674_10093641 3300026116 Bacteria 2992
208 Ga0207674_10153349 3300026116 Bacteria 2260
209 Ga0207683_10005863 3300026121 Bacteria 10536
210 Ga0207683_10013718 3300026121 Bacteria 6908
211 Ga0207683_10280149 3300026121 Bacteria 1524
212 Ga0268266_10000078 3300028379 Bacteria 213632
213 Ga0268264_10000041 3300028381 Bacteria 372501
214 Ga0268264_10011245 3300028381 Bacteria 7396
215 Ga0268264_10021342 3300028381 Bacteria 5287
216 Ga0307517_10001460 3300028786 Bacteria 39582
217 Ga0307515_10000021 3300028794 Bacteria 406008
218 Ga0265327_10000073 3300031251 Bacteria 214772
219 Ga0265313_10072860 3300031595 Bacteria 1578
220 Ga0307510_10005212 3300033180 Bacteria 15447
221 Ga0395899_0025917 3300037312 Unclassified 4425
222 Ga0395900_0003582 3300037418 Bacteria 16697
223 Ga0395898_0119098 3300037466 Bacteria 2529
224 Ga0395905_0002613 3300037471 Bacteria 19818
225 Ga0395901_0031266 3300038443 Bacteria 5488
226 Ga0436365_0758794 3300039437 Bacteria 3212
227 Ga0436361_0460351 3300039447 Bacteria 15392
228 Ga0466972_0001532 3300044658 Bacteria 11268
229 Ga0466965_0085562 3300044683 Bacteria 1598
230 Ga0495638_0019626 3300046460 Bacteria 4471
231 Ga0495650_0031444 3300046471 Bacteria 2389
232 Ga0495631_0003802 3300046518 Bacteria 8208
233 Ga0495643_0024994 3300046522 Bacteria 3384
234 Ga0495668_0000685 3300046616 Bacteria 40831
235 Ga0495611_0000050 3300046648 Bacteria 84026
236 Ga0495683_0006010 3300047323 Bacteria 6668
237 Ga0495686_0000066 3300047472 Bacteria 225023
238 Ga0501032_0018922 3300049569 Bacteria 4819
239 Ga0501033_0021972 3300049570 Bacteria 4813
240 Ga0501034_0002322 3300049571 Bacteria 23228
241 Ga0501038_0020118 3300049574 Bacteria 6005
242 Ga0501039_0044103 3300049575 Bacteria 3444
243 Ga0501043_0051733 3300049579 Bacteria 3227
244 Ga0501046_0047345 3300049580 Bacteria 3409
245 Ga0501047_0011656 3300049581 Bacteria 8311
246 Ga0501073_0012267 3300049589 Bacteria 6253
247 Ga0501074_0148219 3300049590 Bacteria 1678
248 Ga0501083_0023945 3300049744 Unclassified 4233
249 Ga0501035_0027402 3300049822 Bacteria 5208
250 Ga0501044_0007395 3300049823 Bacteria 12079
251 Ga0501044_0044893 3300049823 Unclassified 4583
252 nmdc:mga0k408_43398_c1 3300050493 Bacteria 2591
253 Ga0500635_0000783 3300053080 Bacteria 7892
254 Ga0501084_0032390 3300054114 Unclassified 4372
255 Ga0501082_0093816 3300060353 Unclassified 2593

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300006195 Ga0075366_10010113 Ga0075366_100101134 366
2 3300050493 nmdc:mga0k408_43398_c1 nmdc:mga0k408_43398_c1_1423_2526 366
3 3300047472 Ga0495686_0000066 Ga0495686_0000066_77915_79219 393
4 3300005355 Ga0070671_100021052 Ga0070671_1000210522 403
5 3300005617 Ga0068859_100000006 Ga0068859_100000006207 403
6 3300005618 Ga0068864_100002292 Ga0068864_1000022928 403
7 3300005841 Ga0068863_100028915 Ga0068863_1000289152 403
8 3300005842 Ga0068858_100000396 Ga0068858_10000039645 403
9 3300006931 Ga0097620_100000006 Ga0097620_100000006207 403
10 3300009101 Ga0105247_10003209 Ga0105247_1000320912 403
11 3300009553 Ga0105249_10272753 Ga0105249_102727532 403
12 3300011119 Ga0105246_10009305 Ga0105246_100093052 403
13 3300013308 Ga0157375_10028828 Ga0157375_100288283 403
14 3300014968 Ga0157379_10052786 Ga0157379_100527862 403
15 3300025900 Ga0207710_10025709 Ga0207710_100257092 403
16 3300025911 Ga0207654_10001964 Ga0207654_100019643 403
17 3300025914 Ga0207671_10097127 Ga0207671_100971272 403
18 3300025931 Ga0207644_10063849 Ga0207644_100638492 403
19 3300025961 Ga0207712_10079741 Ga0207712_100797412 403
20 3300026023 Ga0207677_10146940 Ga0207677_101469401 403
21 3300026035 Ga0207703_10005846 Ga0207703_100058464 403
22 3300026088 Ga0207641_10125688 Ga0207641_101256882 403
23 3300026095 Ga0207676_10006644 Ga0207676_100066446 403
24 3300031595 Ga0265313_10072860 Ga0265313_100728601 414
25 3300021361 Ga0213872_10003463 Ga0213872_100034633 416
26 3300039447 Ga0436361_0460351 Ga0436361_0460351_11411_12718 416
27 3300006881 Ga0068865_100226579 Ga0068865_1002265792 417
28 3300005577 Ga0068857_100197742 Ga0068857_1001977423 418
29 3300009551 Ga0105238_10254049 Ga0105238_102540492 421
30 3300026121 Ga0207683_10280149 Ga0207683_102801492 421
31 3300013297 Ga0157378_10008669 Ga0157378_100086692 422
32 3300013306 Ga0163162_10028152 Ga0163162_100281522 422
33 3300013308 Ga0157375_10098865 Ga0157375_100988652 422
34 3300031251 Ga0265327_10000073 Ga0265327_100000736 422
35 3300025961 Ga0207712_10054495 Ga0207712_100544953 423
36 3300046471 Ga0495650_0031444 Ga0495650_0031444_44_1405 424
37 3300005466 Ga0070685_10106125 Ga0070685_101061252 425
38 3300013296 Ga0157374_10082134 Ga0157374_100821342 425
39 3300053080 Ga0500635_0000783 Ga0500635_0000783_4042_5445 426
40 3300005329 Ga0070683_100139604 Ga0070683_1001396042 427
41 3300009174 Ga0105241_10007247 Ga0105241_100072473 428
42 3300009545 Ga0105237_10317025 Ga0105237_103170252 428
43 3300025914 Ga0207671_10017503 Ga0207671_100175032 428
44 3300044658 Ga0466972_0001532 Ga0466972_0001532_9825_11111 428
45 3300003322 rootL2_10064553 rootL2_100645536 429
46 3300013296 Ga0157374_10000003 Ga0157374_10000003230 429
47 3300014969 Ga0157376_10002481 Ga0157376_1000248112 429
48 3300005618 Ga0068864_100043067 Ga0068864_1000430673 431
49 3300005843 Ga0068860_100000208 Ga0068860_10000020829 431
50 3300009545 Ga0105237_10001396 Ga0105237_100013964 431
51 3300013306 Ga0163162_10001062 Ga0163162_100010622 431
52 3300014968 Ga0157379_10020530 Ga0157379_100205303 431
53 3300025914 Ga0207671_10022740 Ga0207671_100227404 431
54 3300025944 Ga0207661_10078516 Ga0207661_100785162 431
55 3300028381 Ga0268264_10000041 Ga0268264_1000004156 431
56 3300049580 Ga0501046_0047345 Ga0501046_0047345_1609_2907 431
57 3300049589 Ga0501073_0012267 Ga0501073_0012267_968_2266 431
58 3300049590 Ga0501074_0148219 Ga0501074_0148219_184_1482 431
59 3300049744 Ga0501083_0023945 Ga0501083_0023945_2588_3886 431
60 3300049823 Ga0501044_0044893 Ga0501044_0044893_2963_4261 431
61 3300054114 Ga0501084_0032390 Ga0501084_0032390_2960_4258 431
62 3300060353 Ga0501082_0093816 Ga0501082_0093816_1194_2492 431
63 3300005327 Ga0070658_10031222 Ga0070658_100312225 432
64 3300005329 Ga0070683_100003637 Ga0070683_10000363712 432
65 3300005337 Ga0070682_100019346 Ga0070682_1000193462 432
66 3300005338 Ga0068868_100084194 Ga0068868_1000841943 432
67 3300005339 Ga0070660_100014513 Ga0070660_1000145134 432
68 3300005344 Ga0070661_100020640 Ga0070661_1000206402 432
69 3300005367 Ga0070667_100069443 Ga0070667_1000694431 432
70 3300005457 Ga0070662_100011533 Ga0070662_1000115334 432
71 3300005459 Ga0068867_100098534 Ga0068867_1000985342 432
72 3300005535 Ga0070684_100005417 Ga0070684_1000054172 432
73 3300005563 Ga0068855_100017173 Ga0068855_1000171737 432
74 3300005564 Ga0070664_100017883 Ga0070664_1000178836 432
75 3300005577 Ga0068857_100098617 Ga0068857_1000986172 432
76 3300005614 Ga0068856_100001417 Ga0068856_1000014171 432
77 3300005614 Ga0068856_100025197 Ga0068856_1000251974 432
78 3300005618 Ga0068864_100174607 Ga0068864_1001746072 432
79 3300005618 Ga0068864_100230628 Ga0068864_1002306282 432
80 3300006358 Ga0068871_100025582 Ga0068871_1000255823 432
81 3300006358 Ga0068871_100050488 Ga0068871_1000504882 432
82 3300010375 Ga0105239_10000721 Ga0105239_1000072117 432
83 3300013100 Ga0157373_10020127 Ga0157373_100201272 432
84 3300013102 Ga0157371_10052657 Ga0157371_100526572 432
85 3300013296 Ga0157374_10053333 Ga0157374_100533332 432
86 3300013296 Ga0157374_10119132 Ga0157374_101191322 432
87 3300013297 Ga0157378_10064721 Ga0157378_100647212 432
88 3300013306 Ga0163162_10127022 Ga0163162_101270222 432
89 3300013306 Ga0163162_10330707 Ga0163162_103307071 432
90 3300013308 Ga0157375_10127637 Ga0157375_101276373 432
91 3300013308 Ga0157375_10248235 Ga0157375_102482352 432
92 3300014969 Ga0157376_10058903 Ga0157376_100589032 432
93 3300025914 Ga0207671_10032185 Ga0207671_100321852 432
94 3300025925 Ga0207650_10017803 Ga0207650_100178032 432
95 3300025933 Ga0207706_10006551 Ga0207706_100065518 432
96 3300025944 Ga0207661_10073773 Ga0207661_100737732 432
97 3300025945 Ga0207679_10190581 Ga0207679_101905812 432
98 3300025986 Ga0207658_10060069 Ga0207658_100600691 432
99 3300026023 Ga0207677_10055787 Ga0207677_100557874 432
100 3300026078 Ga0207702_10079171 Ga0207702_100791712 432
101 3300026078 Ga0207702_10337337 Ga0207702_103373371 432
102 3300026089 Ga0207648_10051267 Ga0207648_100512672 432
103 3300026095 Ga0207676_10211551 Ga0207676_102115511 432
104 3300026116 Ga0207674_10093641 Ga0207674_100936412 432
105 3300046460 Ga0495638_0019626 Ga0495638_0019626_2824_4122 432
106 3300003320 rootH2_10007197 rootH2_1000719729 433
107 3300003323 rootH1_10242349 rootH1_102423492 433
108 3300003354 JGI25160J50197_1003086 JGI25160J50197_10030863 433
109 3300005327 Ga0070658_10000058 Ga0070658_1000005862 433
110 3300005328 Ga0070676_10003968 Ga0070676_100039682 433
111 3300005334 Ga0068869_100038325 Ga0068869_1000383252 433
112 3300005335 Ga0070666_10049688 Ga0070666_100496882 433
113 3300005335 Ga0070666_10094563 Ga0070666_100945632 433
114 3300005338 Ga0068868_100006082 Ga0068868_1000060822 433
115 3300005344 Ga0070661_100249156 Ga0070661_1002491561 433
116 3300005364 Ga0070673_100080673 Ga0070673_1000806732 433
117 3300005367 Ga0070667_100064491 Ga0070667_1000644912 433
118 3300005456 Ga0070678_100002806 Ga0070678_1000028062 433
119 3300005456 Ga0070678_100016154 Ga0070678_1000161543 433
120 3300005459 Ga0068867_100004560 Ga0068867_1000045608 433
121 3300005539 Ga0068853_100016071 Ga0068853_1000160712 433
122 3300005539 Ga0068853_100016459 Ga0068853_1000164592 433
123 3300005548 Ga0070665_100000003 Ga0070665_100000003275 433
124 3300005563 Ga0068855_100001221 Ga0068855_10000122125 433
125 3300005563 Ga0068855_100012811 Ga0068855_1000128116 433
126 3300005563 Ga0068855_100076739 Ga0068855_1000767392 433
127 3300005616 Ga0068852_100000515 Ga0068852_10000051521 433
128 3300005617 Ga0068859_100009998 Ga0068859_1000099987 433
129 3300005843 Ga0068860_100001991 Ga0068860_1000019919 433
130 3300005843 Ga0068860_100006943 Ga0068860_1000069431 433
131 3300005843 Ga0068860_100082278 Ga0068860_1000822782 433
132 3300006237 Ga0097621_100001004 Ga0097621_1000010049 433
133 3300006237 Ga0097621_100002007 Ga0097621_10000200710 433
134 3300006237 Ga0097621_100043888 Ga0097621_1000438884 433
135 3300006358 Ga0068871_100000091 Ga0068871_10000009121 433
136 3300006358 Ga0068871_100000196 Ga0068871_1000001969 433
137 3300006358 Ga0068871_100013577 Ga0068871_1000135774 433
138 3300006358 Ga0068871_100222266 Ga0068871_1002222662 433
139 3300006881 Ga0068865_100000022 Ga0068865_10000002292 433
140 3300006931 Ga0097620_100009998 Ga0097620_1000099987 433
141 3300009093 Ga0105240_10000008 Ga0105240_10000008139 433
142 3300009093 Ga0105240_10003142 Ga0105240_100031422 433
143 3300009093 Ga0105240_10297260 Ga0105240_102972602 433
144 3300009094 Ga0111539_10070214 Ga0111539_100702146 433
145 3300009174 Ga0105241_10006479 Ga0105241_100064794 433
146 3300009176 Ga0105242_10015004 Ga0105242_100150043 433
147 3300009176 Ga0105242_10093679 Ga0105242_100936792 433
148 3300009545 Ga0105237_10001888 Ga0105237_1000188817 433
149 3300009545 Ga0105237_10020298 Ga0105237_100202986 433
150 3300009545 Ga0105237_10040807 Ga0105237_100408072 433
151 3300009551 Ga0105238_10017681 Ga0105238_100176812 433
152 3300009553 Ga0105249_10013337 Ga0105249_100133375 433
153 3300013102 Ga0157371_10000959 Ga0157371_100009592 433
154 3300013104 Ga0157370_10003210 Ga0157370_100032109 433
155 3300013104 Ga0157370_10215535 Ga0157370_102155351 433
156 3300013296 Ga0157374_10005869 Ga0157374_100058695 433
157 3300013296 Ga0157374_10012422 Ga0157374_100124222 433
158 3300013296 Ga0157374_10072268 Ga0157374_100722682 433
159 3300013297 Ga0157378_10001999 Ga0157378_1000199912 433
160 3300013297 Ga0157378_10006773 Ga0157378_100067734 433
161 3300013297 Ga0157378_10240258 Ga0157378_102402582 433
162 3300013306 Ga0163162_10000064 Ga0163162_1000006476 433
163 3300013306 Ga0163162_10000434 Ga0163162_1000043424 433
164 3300013306 Ga0163162_10018743 Ga0163162_100187432 433
165 3300013306 Ga0163162_10022513 Ga0163162_100225132 433
166 3300013306 Ga0163162_10029296 Ga0163162_100292962 433
167 3300013306 Ga0163162_10146199 Ga0163162_101461993 433
168 3300013306 Ga0163162_10155242 Ga0163162_101552422 433
169 3300013307 Ga0157372_10042582 Ga0157372_100425822 433
170 3300013307 Ga0157372_10276216 Ga0157372_102762162 433
171 3300013308 Ga0157375_10004557 Ga0157375_100045577 433
172 3300013308 Ga0157375_10005783 Ga0157375_100057832 433
173 3300013308 Ga0157375_10112870 Ga0157375_101128702 433
174 3300014325 Ga0163163_10000694 Ga0163163_100006947 433
175 3300014969 Ga0157376_10000420 Ga0157376_1000042016 433
176 3300014969 Ga0157376_10020890 Ga0157376_100208903 433
177 3300014969 Ga0157376_10068576 Ga0157376_100685762 433
178 3300017792 Ga0163161_10006992 Ga0163161_100069925 433
179 3300017792 Ga0163161_10068751 Ga0163161_100687512 433
180 3300025302 Ga0207426_1000105 Ga0207426_1000105202 433
181 3300025903 Ga0207680_10079202 Ga0207680_100792022 433
182 3300025903 Ga0207680_10096364 Ga0207680_100963642 433
183 3300025907 Ga0207645_10004901 Ga0207645_100049012 433
184 3300025909 Ga0207705_10000090 Ga0207705_1000009046 433
185 3300025913 Ga0207695_10000021 Ga0207695_10000021262 433
186 3300025913 Ga0207695_10013372 Ga0207695_100133728 433
187 3300025914 Ga0207671_10000799 Ga0207671_1000079931 433
188 3300025914 Ga0207671_10033053 Ga0207671_100330532 433
189 3300025924 Ga0207694_10012221 Ga0207694_100122212 433
190 3300025931 Ga0207644_10079829 Ga0207644_100798292 433
191 3300025938 Ga0207704_10000011 Ga0207704_1000001184 433
192 3300025942 Ga0207689_10006834 Ga0207689_100068345 433
193 3300025942 Ga0207689_10150892 Ga0207689_101508922 433
194 3300025949 Ga0207667_10009633 Ga0207667_100096336 433
195 3300025949 Ga0207667_10018420 Ga0207667_100184207 433
196 3300025949 Ga0207667_10079356 Ga0207667_100793562 433
197 3300025960 Ga0207651_10039035 Ga0207651_100390352 433
198 3300025986 Ga0207658_10047999 Ga0207658_100479992 433
199 3300026023 Ga0207677_10008527 Ga0207677_100085274 433
200 3300026041 Ga0207639_10070903 Ga0207639_100709032 433
201 3300026089 Ga0207648_10001059 Ga0207648_100010592 433
202 3300026116 Ga0207674_10153349 Ga0207674_101533492 433
203 3300026121 Ga0207683_10005863 Ga0207683_100058639 433
204 3300026121 Ga0207683_10013718 Ga0207683_100137182 433
205 3300028379 Ga0268266_10000078 Ga0268266_1000007865 433
206 3300028381 Ga0268264_10011245 Ga0268264_100112452 433
207 3300028381 Ga0268264_10021342 Ga0268264_100213424 433
208 3300028786 Ga0307517_10001460 Ga0307517_100014601 433
209 3300028794 Ga0307515_10000021 Ga0307515_10000021112 433
210 3300033180 Ga0307510_10005212 Ga0307510_1000521210 433
211 3300037312 Ga0395899_0025917 Ga0395899_0025917_3060_4367 433
212 3300037418 Ga0395900_0003582 Ga0395900_0003582_8968_10275 433
213 3300037466 Ga0395898_0119098 Ga0395898_0119098_1164_2471 433
214 3300037471 Ga0395905_0002613 Ga0395905_0002613_4571_5878 433
215 3300038443 Ga0395901_0031266 Ga0395901_0031266_1320_2627 433
216 3300039437 Ga0436365_0758794 Ga0436365_0758794_1510_2814 433
217 3300046518 Ga0495631_0003802 Ga0495631_0003802_3793_5094 433
218 3300046522 Ga0495643_0024994 Ga0495643_0024994_182_1486 433
219 3300046648 Ga0495611_0000050 Ga0495611_0000050_50159_51460 433
220 3300047323 Ga0495683_0006010 Ga0495683_0006010_1277_2578 433
221 3300049569 Ga0501032_0018922 Ga0501032_0018922_629_1954 433
222 3300049570 Ga0501033_0021972 Ga0501033_0021972_781_2106 433
223 3300049571 Ga0501034_0002322 Ga0501034_0002322_14084_15409 433
224 3300049574 Ga0501038_0020118 Ga0501038_0020118_3640_4965 433
225 3300049575 Ga0501039_0044103 Ga0501039_0044103_1088_2413 433
226 3300049579 Ga0501043_0051733 Ga0501043_0051733_1048_2373 433
227 3300049581 Ga0501047_0011656 Ga0501047_0011656_1668_2993 433
228 3300049822 Ga0501035_0027402 Ga0501035_0027402_909_2234 433
229 3300049823 Ga0501044_0007395 Ga0501044_0007395_9180_10505 433
230 3300003320 rootH2_10004568 rootH2_1000456811 434
231 3300003322 rootL2_10026796 rootL2_100267963 434
232 3300005331 Ga0070670_100121770 Ga0070670_1001217702 434
233 3300005334 Ga0068869_100049438 Ga0068869_1000494382 434
234 3300005338 Ga0068868_100094271 Ga0068868_1000942714 434
235 3300005347 Ga0070668_100118520 Ga0070668_1001185201 434
236 3300005354 Ga0070675_100077750 Ga0070675_1000777502 434
237 3300005356 Ga0070674_100112151 Ga0070674_1001121512 434
238 3300005364 Ga0070673_100029069 Ga0070673_1000290692 434
239 3300005367 Ga0070667_100072682 Ga0070667_1000726822 434
240 3300005548 Ga0070665_100312843 Ga0070665_1003128432 434
241 3300005718 Ga0068866_10062361 Ga0068866_100623612 434
242 3300006358 Ga0068871_100027150 Ga0068871_1000271505 434
243 3300006881 Ga0068865_100008918 Ga0068865_1000089187 434
244 3300009094 Ga0111539_10046449 Ga0111539_100464494 434
245 3300014326 Ga0157380_10001444 Ga0157380_100014447 434
246 3300025901 Ga0207688_10016824 Ga0207688_100168242 434
247 3300025903 Ga0207680_10027468 Ga0207680_100274682 434
248 3300025907 Ga0207645_10000613 Ga0207645_1000061323 434
249 3300025908 Ga0207643_10044944 Ga0207643_100449442 434
250 3300025937 Ga0207669_10078410 Ga0207669_100784102 434
251 3300025938 Ga0207704_10065422 Ga0207704_100654222 434
252 3300025940 Ga0207691_10016919 Ga0207691_100169194 434
253 3300025942 Ga0207689_10032422 Ga0207689_100324224 434
254 3300044683 Ga0466965_0085562 Ga0466965_0085562_78_1382 434
255 3300046616 Ga0495668_0000685 Ga0495668_0000685_37942_39249 434

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07980

SusD_RagB

SusD family

278

442

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5t4y-assembly1.cif.gz_B crystal structure of bt1762-1763 0.7768 23 432
5lx8-assembly1.cif.gz_A crystal structure of bt1762 0.7588 41 432
3lew-assembly1.cif.gz_A crystal structure of susd-like carbohydrate binding protein (yp_001298396.1) from bacteroides vulgatus atcc 8482 at 1.70 a resolution 0.7556 42 407
7kv3-assembly1.cif.gz_AAA surface glycan-binding protein a from bacteroides thetaiotaomicron in complex with laminarihexaose 0.7533 41 432
3snx-assembly2.cif.gz_B crystal structure of a putative susd-like carbohydrate binding protein (bt_1439) from bacteroides thetaiotaomicron vpi-5482 at 1.88 a resolution 0.7444 44 407
ID Description Score Start End Superfamily
af_D4A1W7_1178_1303_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8006 108 245 1.25.40.10
af_P0CI65_895_1047_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.7846 108 245 1.25.40.10
af_P0CI65_1149_1276_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.779 108 245 1.25.40.10
af_F4HS99_882_995_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.7719 108 245 1.25.40.10
af_O94826_105_217_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.7685 108 245 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A846MTJ6-F1-model_v4 RagB/SusD domain-containing protein 0.989 75 433 GO:0009279
AF-A0A0K1QGC7-F1-model_v4 SusD/RagB family protein 0.9889 43 429 GO:0009279
AF-A0A317J0D4-F1-model_v4 RagB/SusD family nutrient uptake outer membrane protein 0.9853 197 433 GO:0009279
AF-A0A661Y2E8-F1-model_v4 RagB/SusD domain-containing protein 0.9811 137 434 GO:0009279
AF-A0A7Y3GRL3-F1-model_v4 RagB/SusD family nutrient uptake outer membrane protein 0.9797 37 434 GO:0009279

Feature Viewer

pLDDT pTM Quality
90 0.89 High
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Predicted Structure (AlphaFold2)

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