F365269

General Info

Members Datasets Scaffolds Average Seq Length
254 171 508 349

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0000097|Ga0500616_0000097_173306_174469
Length 387
Sequence MRSGPLIRATVTAGGSTVAEGREAMTRVTLQTIADRVGVSRMTVSNAFSRPDQLSATLREQILAAAEELGYAGPDPAARALARGSTGAIGVLLTDTLQYAFTDEIATGFLGAVASALAPTGLALTLLTSSPQQREVIPARDVAIDGALVYSCDVNSAGTAWLRRRKLPIVLVDQIPEAGLPSVNIDDRGGARAGAEHLVQLGHRRIAILSSSANGPFGRLEHPVVATSQVTGQRLGGWLEVLTAAGITPTVLQQRPYDPSAEIEATRELLAAPEPPTAILCFSDAMAANAIQTIQDAGLRVPEDISVVGYDDSPLAERLRPPLTTVRQNVVAKGQAAVAALVAEIERVAAGERKTPPASAAPAPAEVLLPTELVIRASTAPPPRTSP

Samples

Sample ID Description Type Environment
1 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
72 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
73 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
76 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
77 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
78 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
79 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
80 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
81 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
82 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
83 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
84 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
85 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
86 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
87 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
88 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
89 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
92 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
93 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
94 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
95 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
96 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
97 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
101 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
102 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
107 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
110 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
111 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
112 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
125 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
129 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
130 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
132 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
133 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
134 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
135 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
136 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
139 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
140 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
145 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
146 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
147 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
148 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
149 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
150 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
151 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
152 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
153 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
154 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
155 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
156 2858882152 Micromonospora noduli MED15 Isolate Nodule
157 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
158 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
159 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
160 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
161 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
162 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
163 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
164 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
165 2902582711 Micromonospora sp. AP08 Isolate Unclassified
166 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
167 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
168 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
169 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
170 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
171 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 89.76
Metatranscriptomes 0
Isolates 10.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.66
Nodule 1.97
Rhizoplane 21.26
Rhizosphere 57.48
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500616_0000097 3300053153 Bacteria 178988
2 Ga0070658_10070555 3300005327 Bacteria 2861
3 Ga0070676_10146826 3300005328 Bacteria 1506
4 Ga0070683_100424852 3300005329 Bacteria 1268
5 Ga0068869_100179117 3300005334 Bacteria 1661
6 Ga0070682_100099699 3300005337 Bacteria 1916
7 Ga0070682_100110006 3300005337 Bacteria 1835
8 Ga0070682_100178349 3300005337 Bacteria 1482
9 Ga0070682_100221416 3300005337 Bacteria 1347
10 Ga0070668_100064216 3300005347 Bacteria 2846
11 Ga0070674_100029302 3300005356 Bacteria 3623
12 Ga0070667_100036275 3300005367 Bacteria 4133
13 Ga0070700_100149747 3300005441 Bacteria 1595
14 Ga0070663_100097825 3300005455 Bacteria 2185
15 Ga0070663_100168974 3300005455 Bacteria 1689
16 Ga0070684_100212573 3300005535 Bacteria 1763
17 Ga0070684_100296688 3300005535 Bacteria 1483
18 Ga0070704_100337254 3300005549 Bacteria 1268
19 Ga0068857_100277860 3300005577 Bacteria 1540
20 Ga0068852_100297208 3300005616 Bacteria 1562
21 Ga0068859_100146459 3300005617 Bacteria 2437
22 Ga0068859_100200126 3300005617 Bacteria 2082
23 Ga0068864_100117429 3300005618 Bacteria 2375
24 Ga0068864_100267099 3300005618 Bacteria 1593
25 Ga0068866_10007544 3300005718 Bacteria 4558
26 Ga0068861_100287187 3300005719 Bacteria 1419
27 Ga0068863_100267211 3300005841 Bacteria 1655
28 Ga0068858_100096917 3300005842 Bacteria 2749
29 Ga0068858_100342650 3300005842 Bacteria 1431
30 Ga0068862_100204234 3300005844 Bacteria 1783
31 Ga0081539_10003736 3300005985 Bacteria 18107
32 Ga0081539_10042951 3300005985 Bacteria 2626
33 Ga0081539_10045006 3300005985 Bacteria 2542
34 Ga0075365_10016066 3300006038 Bacteria 4542
35 Ga0075368_10002479 3300006042 Bacteria 6036
36 Ga0075368_10042099 3300006042 Bacteria 1796
37 Ga0075363_100001511 3300006048 Bacteria 8880
38 Ga0075363_100028347 3300006048 Bacteria 2879
39 Ga0075364_10016404 3300006051 Bacteria 4608
40 Ga0075364_10222427 3300006051 Bacteria 1281
41 Ga0075367_10092294 3300006178 Bacteria 1843
42 Ga0075367_10095790 3300006178 Bacteria 1810
43 Ga0075430_100102910 3300006846 Bacteria 2384
44 Ga0075430_100117272 3300006846 Bacteria 2219
45 Ga0075431_100068965 3300006847 Bacteria 3648
46 Ga0097620_100146455 3300006931 Bacteria 2437
47 Ga0097620_100200120 3300006931 Bacteria 2082
48 Ga0111539_10010510 3300009094 Bacteria 11650
49 Ga0111539_10587487 3300009094 Bacteria 1297
50 Ga0111539_10649157 3300009094 Bacteria 1229
51 Ga0105245_10011506 3300009098 Bacteria 7706
52 Ga0105245_10075014 3300009098 Bacteria 3078
53 Ga0105245_10270601 3300009098 Bacteria 1657
54 Ga0114129_10075847 3300009147 Bacteria 4681
55 Ga0114129_10282219 3300009147 Bacteria 2218
56 Ga0105243_10007342 3300009148 Bacteria 8473
57 Ga0105243_10232294 3300009148 Bacteria 1637
58 Ga0105242_10001118 3300009176 Bacteria 21134
59 Ga0105249_10305806 3300009553 Bacteria 1596
60 Ga0105239_10002802 3300010375 Bacteria 21794
61 Ga0105239_10216006 3300010375 Bacteria 2150
62 Ga0105239_10307127 3300010375 Bacteria 1787
63 Ga0105246_10104583 3300011119 Bacteria 2068
64 Ga0157369_10023160 3300013105 Bacteria 6919
65 Ga0157378_10007483 3300013297 Bacteria 9541
66 Ga0163162_10432072 3300013306 Bacteria 1449
67 Ga0157372_10126204 3300013307 Bacteria 2942
68 Ga0157375_10073881 3300013308 Bacteria 3429
69 Ga0157375_10288253 3300013308 Bacteria 1805
70 Ga0163163_10108896 3300014325 Bacteria 2798
71 Ga0163163_10422517 3300014325 Bacteria 1392
72 Ga0157379_10042068 3300014968 Bacteria 4078
73 Ga0207642_10006689 3300025899 Bacteria 3850
74 Ga0207643_10108949 3300025908 Bacteria 1630
75 Ga0207690_10196559 3300025932 Bacteria 1529
76 Ga0207706_10336730 3300025933 Bacteria 1313
77 Ga0207686_10022932 3300025934 Bacteria 3599
78 Ga0207709_10028412 3300025935 Bacteria 3233
79 Ga0207670_10200727 3300025936 Bacteria 1515
80 Ga0207670_10225151 3300025936 Bacteria 1438
81 Ga0207669_10116225 3300025937 Bacteria 1805
82 Ga0207711_10288222 3300025941 Bacteria 1513
83 Ga0207689_10151611 3300025942 Bacteria 1911
84 Ga0207661_10189163 3300025944 Bacteria 1804
85 Ga0207679_10425038 3300025945 Bacteria 1173
86 Ga0207668_10143339 3300025972 Bacteria 1840
87 Ga0207703_10071018 3300026035 Bacteria 2875
88 Ga0207678_10024163 3300026067 Bacteria 5310
89 Ga0207708_10069604 3300026075 Bacteria 2694
90 Ga0207708_10091795 3300026075 Bacteria 2342
91 Ga0207641_10256359 3300026088 Bacteria 1636
92 Ga0207648_10001986 3300026089 Bacteria 22344
93 Ga0207676_10079176 3300026095 Bacteria 2664
94 Ga0207675_100381310 3300026118 Bacteria 1386
95 Ga0207683_10111231 3300026121 Bacteria 2453
96 Ga0207683_10428900 3300026121 Bacteria 1218
97 Ga0207698_10481123 3300026142 Bacteria 1204
98 Ga0207428_10053904 3300027907 Bacteria 3205
99 Ga0268265_10259942 3300028380 Bacteria 1543
100 Ga0265340_10004430 3300031247 Bacteria 7848
101 Ga0307513_10000274 3300031456 Bacteria 74965
102 Ga0316579_10001321 3300031691 Bacteria 8958
103 Ga0307410_10223978 3300031852 Bacteria 1448
104 Ga0307409_100010857 3300031995 Bacteria 5699
105 Ga0307415_100133261 3300032126 Bacteria 1885
106 Ga0307415_100190424 3300032126 Bacteria 1618
107 Ga0307507_10083075 3300033179 Bacteria 2803
108 Ga0373927_0017670 3300035695 Bacteria 4692
109 Ga0400483_108844 3300039062 Bacteria 50292
110 Ga0400483_154819 3300039062 Bacteria 86927
111 Ga0451791_1205406 3300041451 Bacteria 2366
112 Ga0451793_0467965 3300041452 Bacteria 8194
113 Ga0451795_1579350 3300041456 Bacteria 4958
114 Ga0451833_0493939 3300041491 Bacteria 2102
115 Ga0451839_0550545 3300041496 Bacteria 3883
116 Ga0451853_0189339 3300041512 Bacteria 3766
117 Ga0466964_0026578 3300044706 Bacteria 2267
118 Ga0466957_0069835 3300044842 Bacteria 2170
119 Ga0466960_0018797 3300044901 Bacteria 3034
120 Ga0466958_0077716 3300045836 Bacteria 2039
121 Ga0466967_0033699 3300045976 Bacteria 4339
122 Ga0495650_0042751 3300046471 Bacteria 1927
123 Ga0495582_0134119 3300046473 Bacteria 1400
124 Ga0495667_0088963 3300046559 Bacteria 2002
125 Ga0495581_0122752 3300047315 Bacteria 1512
126 Ga0495674_0115378 3300047319 Bacteria 2273
127 Ga0495674_0235020 3300047319 Bacteria 1512
128 Ga0496100_0011160 3300048903 Bacteria 5105
129 Ga0496100_0122886 3300048903 Bacteria 1819
130 Ga0496100_0212298 3300048903 Bacteria 1416
131 Ga0496101_0083062 3300048904 Bacteria 2371
132 Ga0496101_0111819 3300048904 Bacteria 2057
133 Ga0496102_0004427 3300048905 Bacteria 11864
134 Ga0496102_0091814 3300048905 Bacteria 2811
135 Ga0496102_0105662 3300048905 Bacteria 2620
136 Ga0496102_0111972 3300048905 Bacteria 2545
137 Ga0496102_0159081 3300048905 Bacteria 2124
138 Ga0496102_0593783 3300048905 Bacteria 1030
139 Ga0496104_0018960 3300048907 Bacteria 6285
140 Ga0496104_0124843 3300048907 Bacteria 2471
141 Ga0496105_0006875 3300048908 Bacteria 8757
142 Ga0496105_0006910 3300048908 Bacteria 8736
143 Ga0496105_0018380 3300048908 Bacteria 5617
144 Ga0496105_0143489 3300048908 Bacteria 1964
145 Ga0496106_0026510 3300048909 Bacteria 4316
146 Ga0496106_0370782 3300048909 Bacteria 1150
147 Ga0496107_0012300 3300048910 Bacteria 5975
148 Ga0496107_0255839 3300048910 Bacteria 1303
149 Ga0496108_0039757 3300048911 Bacteria 3920
150 Ga0496108_0042823 3300048911 Bacteria 3780
151 Ga0496109_0024429 3300048912 Bacteria 5372
152 Ga0496109_0030397 3300048912 Bacteria 4841
153 Ga0496109_0137750 3300048912 Bacteria 2282
154 Ga0496109_0161714 3300048912 Bacteria 2098
155 Ga0496109_0163007 3300048912 Bacteria 2089
156 Ga0496110_0027909 3300048913 Bacteria 4842
157 Ga0496110_0049055 3300048913 Bacteria 3702
158 Ga0496110_0106283 3300048913 Bacteria 2518
159 Ga0496110_0109372 3300048913 Bacteria 2482
160 Ga0496110_0136178 3300048913 Bacteria 2219
161 Ga0496110_0153054 3300048913 Bacteria 2088
162 Ga0496110_0266665 3300048913 Bacteria 1559
163 Ga0496111_0000581 3300048914 Bacteria 19141
164 Ga0496111_0064950 3300048914 Bacteria 2648
165 Ga0496111_0096250 3300048914 Bacteria 2173
166 Ga0496111_0135423 3300048914 Bacteria 1824
167 Ga0496111_0197761 3300048914 Bacteria 1494
168 Ga0496113_0102959 3300048916 Bacteria 2214
169 Ga0496113_0237643 3300048916 Bacteria 1453
170 Ga0496114_0000292 3300048917 Bacteria 36655
171 Ga0496114_0033944 3300048917 Bacteria 4207
172 Ga0496114_0087027 3300048917 Bacteria 2649
173 Ga0496114_0098562 3300048917 Bacteria 2492
174 Ga0496114_0109213 3300048917 Bacteria 2368
175 Ga0496114_0125164 3300048917 Bacteria 2215
176 Ga0496114_0247147 3300048917 Bacteria 1569
177 Ga0496114_0342117 3300048917 Bacteria 1323
178 Ga0496115_0158231 3300048918 Bacteria 1872
179 Ga0496124_0132121 3300048927 Bacteria 1982
180 Ga0496126_0268230 3300048929 Bacteria 1417
181 Ga0501032_0026208 3300049569 Bacteria 4013
182 Ga0501033_0113837 3300049570 Bacteria 1967
183 Ga0501034_0011433 3300049571 Bacteria 9197
184 Ga0501037_0253895 3300049573 Bacteria 1230
185 Ga0501038_0000122 3300049574 Bacteria 65832
186 Ga0501039_0027711 3300049575 Bacteria 4357
187 Ga0501040_0033921 3300049576 Bacteria 3459
188 Ga0501041_0043883 3300049577 Bacteria 2718
189 Ga0501043_0284151 3300049579 Bacteria 1268
190 Ga0501046_0003953 3300049580 Bacteria 13538
191 Ga0501047_0004480 3300049581 Bacteria 13142
192 Ga0501048_0075644 3300049582 Bacteria 2376
193 Ga0501067_0012608 3300049583 Bacteria 4691
194 Ga0501067_0100914 3300049583 Bacteria 1603
195 Ga0501068_0073237 3300049584 Bacteria 2093
196 Ga0501068_0110265 3300049584 Bacteria 1711
197 Ga0501071_0059583 3300049587 Bacteria 2762
198 Ga0501071_0176261 3300049587 Bacteria 1601
199 Ga0501072_0215930 3300049588 Bacteria 1529
200 Ga0501079_0042669 3300049741 Bacteria 3502
201 Ga0501081_0076670 3300049743 Bacteria 2335
202 Ga0501081_0103744 3300049743 Bacteria 2012
203 Ga0501035_0004604 3300049822 Bacteria 13079
204 Ga0501045_0122176 3300049824 Bacteria 1933
205 nmdc:mga03n38_19892_c1 3300050490 Bacteria 2676
206 nmdc:mga00v17_35877_c1 3300050491 Bacteria 2953
207 nmdc:mga00v17_55621_c1 3300050491 Bacteria 2417
208 nmdc:mga00v17_7402_c1 3300050491 Bacteria 5856
209 nmdc:mga0yw44_55539_c1 3300050492 Bacteria 2410
210 nmdc:mga06z11_149762_c1 3300050494 Bacteria 1325
211 nmdc:mga06z11_235406_c1 3300050494 Bacteria 1074
212 nmdc:mga06z11_69635_c1 3300050494 Bacteria 1858
213 nmdc:mga04h51_37736_c1 3300050495 Bacteria 1561
214 nmdc:mga05p37_36173_c1 3300050507 Bacteria 6059
215 nmdc:mga09592_162021_c1 3300050508 Bacteria 1933
216 nmdc:mga0qj67_118129_c1 3300050509 Bacteria 2144
217 nmdc:mga06r32_4099_c1 3300050510 Bacteria 13058
218 nmdc:mga08y16_352182_c1 3300050511 Bacteria 1512
219 nmdc:mga08y16_6200_c1 3300050511 Bacteria 12545
220 Ga0500568_0014448 3300053139 Bacteria 3565
221 Ga0500616_0000646 3300053153 Bacteria 41717
222 Ga0500616_0001030 3300053153 Bacteria 29523
223 Ga0501084_0218374 3300054114 Bacteria 1609
224 Ga0501082_0058977 3300060353 Bacteria 3307
225 Ga0501082_0369116 3300060353 Bacteria 1252
226 Ga0530510_0031142 3300061734 Bacteria 3835
227 Ga0530510_0142067 3300061734 Bacteria 1769
228 Ga0530510_0178581 3300061734 Bacteria 1574
229 2644504663 2643221690 Bacteria 4654705
230 2644523870 2643221694 Bacteria 4392972
231 2644667966 2643221722 Bacteria 4247614
232 2753270539 2751185782 Bacteria 11227053
233 2772645550 2772190715 Bacteria 6959372
234 2808874414 2808606365 Bacteria 4301966
235 2855673193 2855670206 Bacteria 7120389
236 2855682116 2855676851 Bacteria 7063653
237 2857293615 2857288857 Bacteria 7189066
238 2858851212 2858848962 Bacteria 6963058
239 2858887675 2858882152 Bacteria 7230291
240 2858893508 2858888857 Bacteria 7060307
241 2858896959 2858895516 Bacteria 7378898
242 2869054774 2869048445 Bacteria 6875584
243 2869062919 2869061728 Bacteria 7112407
244 2869069000 2869068681 Bacteria 7205615
245 2880491708 2880489317 Bacteria 7096270
246 2880500632 2880495981 Bacteria 7340502
247 2887482575 2887478801 Bacteria 8972725
248 2902585990 2902582711 Bacteria 6187705
249 2929222818 2929219909 Bacteria 6984360
250 2929229125 2929226422 Bacteria 7248583
251 8003831247 8003830390 Bacteria 6541657
252 8054709278 8054704163 Bacteria 7247792
253 8054727745 8054727385 Bacteria 7558670
254 8054736673 8054734606 Bacteria 6947278
255 Ga0500616_0000097
256 Ga0070658_10070555
257 Ga0070676_10146826
258 Ga0070683_100424852
259 Ga0068869_100179117
260 Ga0070682_100099699
261 Ga0070682_100110006
262 Ga0070682_100178349
263 Ga0070682_100221416
264 Ga0070668_100064216
265 Ga0070674_100029302
266 Ga0070667_100036275
267 Ga0070700_100149747
268 Ga0070663_100097825
269 Ga0070663_100168974
270 Ga0070684_100212573
271 Ga0070684_100296688
272 Ga0070704_100337254
273 Ga0068857_100277860
274 Ga0068852_100297208
275 Ga0068859_100146459
276 Ga0068859_100200126
277 Ga0068864_100117429
278 Ga0068864_100267099
279 Ga0068866_10007544
280 Ga0068861_100287187
281 Ga0068863_100267211
282 Ga0068858_100096917
283 Ga0068858_100342650
284 Ga0068862_100204234
285 Ga0081539_10003736
286 Ga0081539_10042951
287 Ga0081539_10045006
288 Ga0075365_10016066
289 Ga0075368_10002479
290 Ga0075368_10042099
291 Ga0075363_100001511
292 Ga0075363_100028347
293 Ga0075364_10016404
294 Ga0075364_10222427
295 Ga0075367_10092294
296 Ga0075367_10095790
297 Ga0075430_100102910
298 Ga0075430_100117272
299 Ga0075431_100068965
300 Ga0097620_100146455
301 Ga0097620_100200120
302 Ga0111539_10010510
303 Ga0111539_10587487
304 Ga0111539_10649157
305 Ga0105245_10011506
306 Ga0105245_10075014
307 Ga0105245_10270601
308 Ga0114129_10075847
309 Ga0114129_10282219
310 Ga0105243_10007342
311 Ga0105243_10232294
312 Ga0105242_10001118
313 Ga0105249_10305806
314 Ga0105239_10002802
315 Ga0105239_10216006
316 Ga0105239_10307127
317 Ga0105246_10104583
318 Ga0157369_10023160
319 Ga0157378_10007483
320 Ga0163162_10432072
321 Ga0157372_10126204
322 Ga0157375_10073881
323 Ga0157375_10288253
324 Ga0163163_10108896
325 Ga0163163_10422517
326 Ga0157379_10042068
327 Ga0207642_10006689
328 Ga0207643_10108949
329 Ga0207690_10196559
330 Ga0207706_10336730
331 Ga0207686_10022932
332 Ga0207709_10028412
333 Ga0207670_10200727
334 Ga0207670_10225151
335 Ga0207669_10116225
336 Ga0207711_10288222
337 Ga0207689_10151611
338 Ga0207661_10189163
339 Ga0207679_10425038
340 Ga0207668_10143339
341 Ga0207703_10071018
342 Ga0207678_10024163
343 Ga0207708_10069604
344 Ga0207708_10091795
345 Ga0207641_10256359
346 Ga0207648_10001986
347 Ga0207676_10079176
348 Ga0207675_100381310
349 Ga0207683_10111231
350 Ga0207683_10428900
351 Ga0207698_10481123
352 Ga0207428_10053904
353 Ga0268265_10259942
354 Ga0265340_10004430
355 Ga0307513_10000274
356 Ga0316579_10001321
357 Ga0307410_10223978
358 Ga0307409_100010857
359 Ga0307415_100133261
360 Ga0307415_100190424
361 Ga0307507_10083075
362 Ga0373927_0017670
363 Ga0400483_108844
364 Ga0400483_154819
365 Ga0451791_1205406
366 Ga0451793_0467965
367 Ga0451795_1579350
368 Ga0451833_0493939
369 Ga0451839_0550545
370 Ga0451853_0189339
371 Ga0466964_0026578
372 Ga0466957_0069835
373 Ga0466960_0018797
374 Ga0466958_0077716
375 Ga0466967_0033699
376 Ga0495650_0042751
377 Ga0495582_0134119
378 Ga0495667_0088963
379 Ga0495581_0122752
380 Ga0495674_0115378
381 Ga0495674_0235020
382 Ga0496100_0011160
383 Ga0496100_0122886
384 Ga0496100_0212298
385 Ga0496101_0083062
386 Ga0496101_0111819
387 Ga0496102_0004427
388 Ga0496102_0091814
389 Ga0496102_0105662
390 Ga0496102_0111972
391 Ga0496102_0159081
392 Ga0496102_0593783
393 Ga0496104_0018960
394 Ga0496104_0124843
395 Ga0496105_0006875
396 Ga0496105_0006910
397 Ga0496105_0018380
398 Ga0496105_0143489
399 Ga0496106_0026510
400 Ga0496106_0370782
401 Ga0496107_0012300
402 Ga0496107_0255839
403 Ga0496108_0039757
404 Ga0496108_0042823
405 Ga0496109_0024429
406 Ga0496109_0030397
407 Ga0496109_0137750
408 Ga0496109_0161714
409 Ga0496109_0163007
410 Ga0496110_0027909
411 Ga0496110_0049055
412 Ga0496110_0106283
413 Ga0496110_0109372
414 Ga0496110_0136178
415 Ga0496110_0153054
416 Ga0496110_0266665
417 Ga0496111_0000581
418 Ga0496111_0064950
419 Ga0496111_0096250
420 Ga0496111_0135423
421 Ga0496111_0197761
422 Ga0496113_0102959
423 Ga0496113_0237643
424 Ga0496114_0000292
425 Ga0496114_0033944
426 Ga0496114_0087027
427 Ga0496114_0098562
428 Ga0496114_0109213
429 Ga0496114_0125164
430 Ga0496114_0247147
431 Ga0496114_0342117
432 Ga0496115_0158231
433 Ga0496124_0132121
434 Ga0496126_0268230
435 Ga0501032_0026208
436 Ga0501033_0113837
437 Ga0501034_0011433
438 Ga0501037_0253895
439 Ga0501038_0000122
440 Ga0501039_0027711
441 Ga0501040_0033921
442 Ga0501041_0043883
443 Ga0501043_0284151
444 Ga0501046_0003953
445 Ga0501047_0004480
446 Ga0501048_0075644
447 Ga0501067_0012608
448 Ga0501067_0100914
449 Ga0501068_0073237
450 Ga0501068_0110265
451 Ga0501071_0059583
452 Ga0501071_0176261
453 Ga0501072_0215930
454 Ga0501079_0042669
455 Ga0501081_0076670
456 Ga0501081_0103744
457 Ga0501035_0004604
458 Ga0501045_0122176
459 nmdc:mga03n38_19892_c1
460 nmdc:mga00v17_35877_c1
461 nmdc:mga00v17_55621_c1
462 nmdc:mga00v17_7402_c1
463 nmdc:mga0yw44_55539_c1
464 nmdc:mga06z11_149762_c1
465 nmdc:mga06z11_235406_c1
466 nmdc:mga06z11_69635_c1
467 nmdc:mga04h51_37736_c1
468 nmdc:mga05p37_36173_c1
469 nmdc:mga09592_162021_c1
470 nmdc:mga0qj67_118129_c1
471 nmdc:mga06r32_4099_c1
472 nmdc:mga08y16_352182_c1
473 nmdc:mga08y16_6200_c1
474 Ga0500568_0014448
475 Ga0500616_0000646
476 Ga0500616_0001030
477 Ga0501084_0218374
478 Ga0501082_0058977
479 Ga0501082_0369116
480 Ga0530510_0031142
481 Ga0530510_0142067
482 Ga0530510_0178581
483 2644504663
484 2644523870
485 2644667966
486 2753270539
487 2772645550
488 2808874414
489 2855673193
490 2855682116
491 2857293615
492 2858851212
493 2858887675
494 2858893508
495 2858896959
496 2869054774
497 2869062919
498 2869069000
499 2880491708
500 2880500632
501 2887482575
502 2902585990
503 2929222818
504 2929229125
505 8003831247
506 8054709278
507 8054727745
508 8054736673

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13377

Peripla_BP_3

Periplasmic binding protein-like domain

195

379

0.9

PF00532

Peripla_BP_1

Periplasmic binding proteins and sugar binding domain of LacI family

86

356

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cs3-assembly1.cif.gz_A-2 crystal structure of sugar-binding transcriptional regulator (laci family) from enterococcus faecalis 0.8917 73 346
4rk1-assembly2.cif.gz_D crystal structure of laci family transcriptional regulator from enterococcus faecium, target efi-512930, with bound ribose 0.8781 74 350
4rk1-assembly1.cif.gz_A crystal structure of laci family transcriptional regulator from enterococcus faecium, target efi-512930, with bound ribose 0.8721 74 350
4rk1-assembly2.cif.gz_D crystal structure of laci family transcriptional regulator from enterococcus faecium, target efi-512930, with bound ribose 0.872 74 350
1bdh-assembly1.cif.gz_A purine repressor mutant-hypoxanthine-palindromic operator complex 0.8718 15 349
ID Description Score Start End Superfamily
2jcgA01 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9242 14 61 1.10.260.40
3h5tA01 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.92 11 57 1.10.260.40
3h5tA01 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9017 11 57 1.10.260.40
1jhzB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9011 173 349 3.40.50.2300
3k4hB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8995 176 306 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A660QII2-F1-model_v4 LacI family transcriptional regulator 0.9378 168 348 GO:0000976
GO:0003700
AF-A0A5A7N4N5-F1-model_v4 Transcriptional regulator LacI/GalR-like sensor domain-containing protein 0.937 217 346 GO:0000976
GO:0003700
AF-A0A4D4JXX4-F1-model_v4 Transcriptional regulator LacI/GalR-like sensor domain-containing protein 0.9354 192 351 GO:0000976
GO:0003700
AF-A0A1M4DW84-F1-model_v4 HTH-type transcriptional regulator celR 0.9255 73 345 GO:0000976
GO:0003700
AF-A0A3M1GPV4-F1-model_v4 Transcriptional regulator 0.925 259 351 GO:0000976
GO:0003700

Map