F364588

General Info

Members Datasets Scaffolds Average Seq Length
254 185 202 377

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10019750|Ga0070658_100197505
Length 415
Sequence MRGAALTILMSLALAACGPESNARVAVAKAPHAAAQSGDPAPAETEAPNGRGQQPAFPNQTRAPALTTGTQFQVQTIAKGLDHPWGAAFLPDGRLLVTERVGRLRIMSKAGALSAPVAGVPAVVTGQQAGLFDVALDKGGLVYLSYMEARGAGSGVSVARARLLEDDGKPALQDLHVIFRAEPALSGQANIGGRLAFAPDGTLFVTVGDRFSPGNRAHAQTLDNDIGKVVRINADGSIPKDNPFVGRAGARGEIWSIGHRNAESAAINPWTHRLWTVEHGPRGGDEVNIPEAGKNYGWPVITYGIDYSGEPIGAGITAKAGMEQPIYYWDPVIAPSGMAFYDGNLFPLWKGSLFVGGLASTHLARLTLKGDRVVGEEWLLQDLGERIRDVKVGPDGALWLLTDSSNGKVLRIAPK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
3 2506520008 Serratia plymuthica AS12 Isolate Unclassified
4 2511231024 Pseudomonas sp. GM84 Isolate Nodule
5 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
6 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
7 2554235231 Pseudomonas putida MTCC 5279 Isolate Unclassified
8 2597489875 Mesorhizobium ciceri ca181 Isolate Unclassified
9 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
10 2600254954 Pseudomonas sp. NFACC19-2 Isolate Rhizoplane
11 2600255389 Pseudomonas sp. NFPP33 Isolate Rhizoplane
12 2606217733 Pseudomonas aeruginosa NFHH01 Isolate Rhizoplane
13 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
14 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
15 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
16 2738543020 Pseudomonas sp. GV054 Isolate Unclassified
17 2738543021 Pseudomonas sp. GV071 Isolate Unclassified
18 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
19 2765235841 Pseudomonas putida AA7 Isolate Unclassified
20 2772190666 Serratia surfactantfaciens YD25 Isolate Unclassified
21 2806310737 Pseudomonas mosselii BS011 Isolate Unclassified
22 2806310745 Pseudomonas mosselii PtA1 Isolate Unclassified
23 2808606379 Pseudomonas sp. SJZ079 Isolate Rhizosphere
24 2823421272 Pseudomonas mendocina S5.2 Isolate Rhizoplane
25 2842805378 Pseudomonas sp. R-72599 Isolate Unclassified
26 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
27 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
28 2856342000 Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 Isolate Nodule
29 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
30 2881927736 Candidimonas sp. SYP-B2681 Isolate Rhizosphere
31 2888343758 Mesorhizobium sp. AA22 Isolate Unclassified
32 2888366609 Serratia sp. NGAS9 Isolate Rhizosphere
33 2888373701 Serratia rhizosphaerae KUDC3025 Isolate Rhizosphere
34 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
35 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
36 2919501602 Pseudomonas alcaliphila 3512 Isolate Unclassified
37 2924754689 Mesorhizobium sp. M5C.F.Ca.IN.020.32.2.1 Isolate Nodule
38 2926063275 Pseudomonas sp. 3400 Isolate Unclassified
39 2931369376 Pseudomonas fluorescens DR133 Isolate Rhizosphere
40 2937967321 Serratia sp. YC16 Isolate Unclassified
41 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
42 2970540015 Mesorhizobium sp. M5C.F.Ca.IN.020.29.1.1 Isolate Nodule
43 3000376612 Enterobacteriaceae bacterium 4M9 Isolate Rhizosphere
44 3007803356 Pseudomonas sp. CM27 Isolate Unclassified
45 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
46 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
47 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
48 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
49 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
50 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
51 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
52 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
53 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
54 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
55 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
56 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
57 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
58 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
59 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
60 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
61 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
62 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
63 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
64 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
65 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
66 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
67 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
68 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
69 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
70 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
71 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
72 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
73 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
74 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
75 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
76 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
77 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
78 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
79 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
80 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
81 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
82 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
83 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
84 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
85 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
86 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
87 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
88 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
89 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
92 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
107 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
108 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
111 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
112 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
115 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
116 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
117 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
118 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
119 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
120 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
121 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
122 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
123 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
124 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
125 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
126 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
127 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
128 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
129 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
130 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
131 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
132 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
133 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
138 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
144 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
145 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
146 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
147 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
148 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
149 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
150 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
151 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
152 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
153 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
154 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
158 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
159 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
160 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
163 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
164 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
165 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
166 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
167 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
168 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
169 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
170 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
174 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
175 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
176 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
177 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere
178 8004395343 Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1 Isolate Nodule
179 8004592986 Serratia sp. S119 Isolate Unclassified
180 8015394850 Serratia sp. PGPR-27 Isolate Rhizosphere
181 8034962539 Pseudomonas sediminis PI11 Isolate Rhizosphere
182 8054929484 Pseudomonas vlassakiae RW4S1 Isolate Rhizosphere
183 8056115690 Pseudomonas muyukensis COW39 Isolate Rhizosphere
184 8056120720 Pseudomonas maumuensis COW77 Isolate Rhizosphere
185 8056137416 Pseudomonas fakonensis COW40 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.53
Metatranscriptomes 0
Isolates 20.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.51
Nodule 3.15
Rhizoplane 6.3
Rhizosphere 64.96
Stem 0
Stem Tuber 0
Unclassified 20.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3452937 2162886007 Bacteria 2243
2 rootL2_10027795 3300003322 Bacteria 4544
3 Ga0055526_1023438 3300003771 Bacteria 2059
4 Ga0055524_1011697 3300003775 Bacteria 3415
5 Ga0065165_1001209 3300005262 Bacteria 29779
6 Ga0065704_10073552 3300005289 Bacteria 7028
7 Ga0070658_10019750 3300005327 Bacteria 5395
8 Ga0070680_100079118 3300005336 Bacteria 2709
9 Ga0070691_10003421 3300005341 Bacteria 7133
10 Ga0070694_100029397 3300005444 Bacteria 3586
11 Ga0070681_10125577 3300005458 Bacteria 2498
12 Ga0070685_10001111 3300005466 Bacteria 14391
13 Ga0068855_100050537 3300005563 Bacteria 4899
14 Ga0068855_100083163 3300005563 Bacteria 3708
15 Ga0068852_100031034 3300005616 Bacteria 4404
16 Ga0068861_100037920 3300005719 Bacteria 3584
17 Ga0081455_10002540 3300005937 Bacteria 21664
18 Ga0081538_10010075 3300005981 Bacteria 7790
19 Ga0081540_1000064 3300005983 Bacteria 119429
20 Ga0075368_10003438 3300006042 Bacteria 5285
21 Ga0075368_10016916 3300006042 Bacteria 2722
22 Ga0070715_10009900 3300006163 Bacteria 3378
23 Ga0075367_10005424 3300006178 Bacteria 6332
24 Ga0075367_10068687 3300006178 Bacteria 2126
25 Ga0075428_100001027 3300006844 Bacteria 29563
26 Ga0075428_100011136 3300006844 Bacteria 10007
27 Ga0075431_100000017 3300006847 Bacteria 84171
28 Ga0075431_100023792 3300006847 Bacteria 6271
29 Ga0075431_100043697 3300006847 Bacteria 4622
30 Ga0075431_100085331 3300006847 Bacteria 3259
31 Ga0075431_100098078 3300006847 Bacteria 3026
32 Ga0075431_100263728 3300006847 Bacteria 1748
33 Ga0075433_10004977 3300006852 Bacteria 10404
34 Ga0075434_100040930 3300006871 Bacteria 4588
35 Ga0075429_100008600 3300006880 Bacteria 8879
36 Ga0079104_1001960 3300006946 Bacteria 12148
37 Ga0075435_100051643 3300007076 Bacteria 3312
38 Ga0105251_10000349 3300009011 Bacteria 45894
39 Ga0105251_10001176 3300009011 Bacteria 22701
40 Ga0105251_10001340 3300009011 Bacteria 21259
41 Ga0105251_10002128 3300009011 Bacteria 15919
42 Ga0105244_10016737 3300009036 Bacteria 4168
43 Ga0105244_10030539 3300009036 Bacteria 2867
44 Ga0105250_10000601 3300009092 Bacteria 23494
45 Ga0105250_10019530 3300009092 Bacteria 2740
46 Ga0105240_10114654 3300009093 Bacteria 3255
47 Ga0111539_10000735 3300009094 Bacteria 42613
48 Ga0111539_10024466 3300009094 Bacteria 7408
49 Ga0111539_10066626 3300009094 Bacteria 4253
50 Ga0111539_10135919 3300009094 Bacteria 2879
51 Ga0105247_10000025 3300009101 Bacteria 208459
52 Ga0114129_10000025 3300009147 Bacteria 116480
53 Ga0114129_10031383 3300009147 Bacteria 7511
54 Ga0114129_10060809 3300009147 Bacteria 5281
55 Ga0105243_10039628 3300009148 Bacteria 3674
56 Ga0105241_10000005 3300009174 Bacteria 384203
57 Ga0157373_10010841 3300013100 Bacteria 6707
58 Ga0157370_10000055 3300013104 Bacteria 118355
59 Ga0157370_10039452 3300013104 Bacteria 4563
60 Ga0157375_10057785 3300013308 Bacteria 3836
61 Ga0157380_10117610 3300014326 Bacteria 2245
62 Ga0182008_10061518 3300014497 Bacteria 1851
63 Ga0157379_10142500 3300014968 Bacteria 2161
64 Ga0182006_1002335 3300015261 Bacteria 10425
65 Ga0163161_10000001 3300017792 Bacteria 2041488
66 Ga0209676_1000701 3300025292 Bacteria 46848
67 Ga0209564_1001157 3300025295 Bacteria 30759
68 Ga0209256_1002273 3300025299 Bacteria 16266
69 Ga0207696_1000001 3300025711 Bacteria 2579611
70 Ga0207696_1000019 3300025711 Bacteria 476309
71 Ga0207696_1017717 3300025711 Bacteria 2354
72 Ga0207655_1000216 3300025728 Bacteria 99551
73 Ga0207655_1000295 3300025728 Bacteria 75367
74 Ga0207713_1000092 3300025735 Bacteria 148309
75 Ga0207713_1000142 3300025735 Bacteria 107313
76 Ga0207713_1004709 3300025735 Bacteria 8783
77 Ga0207713_1006006 3300025735 Bacteria 7485
78 Ga0207713_1021148 3300025735 Bacteria 3126
79 Ga0207713_1023067 3300025735 Bacteria 2938
80 Ga0207713_1037476 3300025735 Bacteria 2067
81 Ga0207710_10000074 3300025900 Bacteria 147390
82 Ga0207685_10009621 3300025905 Bacteria 2815
83 Ga0207654_10000007 3300025911 Bacteria 384211
84 Ga0207707_10101422 3300025912 Bacteria 2515
85 Ga0207695_10020138 3300025913 Bacteria 7651
86 Ga0207709_10033265 3300025935 Bacteria 3026
87 Ga0207667_10009086 3300025949 Bacteria 11748
88 Ga0207667_10115037 3300025949 Bacteria 2772
89 Ga0207668_10036612 3300025972 Bacteria 3277
90 Ga0207668_10114398 3300025972 Bacteria 2031
91 Ga0207708_10081778 3300026075 Bacteria 2483
92 Ga0207676_10007002 3300026095 Bacteria 7991
93 Ga0207675_100044501 3300026118 Bacteria 4149
94 Ga0209281_1000027 3300027111 Bacteria 463409
95 Ga0209371_1002515 3300027312 Bacteria 10153
96 Ga0268256_1001662 3300030500 Bacteria 12784
97 Ga0307408_100000260 3300031548 Bacteria 53792
98 Ga0307405_10257696 3300031731 Bacteria 1301
99 Ga0373940_0003839 3300035088 Bacteria 3115
100 Ga0373931_0029681 3300035691 Bacteria 2809
101 Ga0395900_0056115 3300037418 Bacteria 4055
102 Ga0395898_0025900 3300037466 Bacteria 5905
103 Ga0395905_0072059 3300037471 Bacteria 3239
104 Ga0439456_005606 3300042013 Bacteria 2550
105 Ga0450911_000002 3300042115 Bacteria 277703
106 Ga0450916_000577 3300042530 Bacteria 3270
107 Ga0450901_000095 3300042533 Bacteria 9349
108 Ga0495627_000018 3300046453 Bacteria 315125
109 Ga0495638_0000301 3300046460 Bacteria 63603
110 Ga0495638_0046559 3300046460 Bacteria 2724
111 Ga0495606_0000845 3300046507 Bacteria 46095
112 Ga0495610_0000111 3300046512 Bacteria 95122
113 Ga0495616_0000143 3300046513 Bacteria 62451
114 Ga0495620_0000035 3300046515 Bacteria 115562
115 Ga0495632_0001602 3300046519 Bacteria 18635
116 Ga0495632_0003546 3300046519 Bacteria 11032
117 Ga0495643_0000202 3300046522 Bacteria 93066
118 Ga0495643_0000558 3300046522 Bacteria 46114
119 Ga0495643_0002850 3300046522 Bacteria 13148
120 Ga0495643_0004711 3300046522 Bacteria 9453
121 Ga0495643_0015144 3300046522 Bacteria 4568
122 Ga0495648_0000548 3300046524 Bacteria 40373
123 Ga0495654_0008485 3300046530 Bacteria 5671
124 Ga0495668_0037561 3300046616 Bacteria 2709
125 Ga0495625_0003180 3300046660 Bacteria 16710
126 Ga0495649_0001682 3300046694 Bacteria 16405
127 Ga0495672_0000541 3300047320 Bacteria 42921
128 Ga0495686_0000007 3300047472 Bacteria 732622
129 Ga0495686_0106136 3300047472 Bacteria 1689
130 Ga0496103_0009167 3300048906 Bacteria 5860
131 Ga0496104_0005038 3300048907 Bacteria 11524
132 Ga0496106_0001458 3300048909 Bacteria 17766
133 Ga0496107_0000038 3300048910 Bacteria 78077
134 Ga0496110_0007079 3300048913 Bacteria 8927
135 Ga0496110_0019139 3300048913 Bacteria 5755
136 Ga0496110_0071339 3300048913 Bacteria 3080
137 Ga0496111_0014492 3300048914 Bacteria 5387
138 Ga0496111_0018593 3300048914 Bacteria 4816
139 Ga0496112_0154707 3300048915 Bacteria 2260
140 Ga0496114_0006030 3300048917 Bacteria 9537
141 Ga0496114_0025586 3300048917 Bacteria 4825
142 Ga0496116_0000023 3300048919 Bacteria 475792
143 Ga0496116_0011307 3300048919 Bacteria 7405
144 Ga0496117_0001266 3300048920 Bacteria 37531
145 Ga0496117_0004846 3300048920 Bacteria 14542
146 Ga0496117_0006744 3300048920 Bacteria 11467
147 Ga0496117_0040295 3300048920 Bacteria 3436
148 Ga0496118_0007380 3300048921 Bacteria 11670
149 Ga0496118_0013855 3300048921 Bacteria 7589
150 Ga0496119_0001099 3300048922 Bacteria 34061
151 Ga0496119_0001480 3300048922 Bacteria 28141
152 Ga0496119_0043940 3300048922 Bacteria 2819
153 Ga0496120_0000052 3300048923 Bacteria 186071
154 Ga0496120_0000137 3300048923 Bacteria 123518
155 Ga0496121_0004382 3300048924 Bacteria 19068
156 Ga0496122_0012157 3300048925 Bacteria 8608
157 Ga0496123_0001278 3300048926 Bacteria 35952
158 Ga0496123_0023549 3300048926 Bacteria 4710
159 Ga0496124_0000017 3300048927 Bacteria 444389
160 Ga0496124_0002164 3300048927 Bacteria 26341
161 Ga0496124_0003671 3300048927 Bacteria 18557
162 Ga0496124_0162812 3300048927 Bacteria 1737
163 Ga0496125_0000840 3300048928 Bacteria 49369
164 Ga0496125_0022405 3300048928 Bacteria 5867
165 Ga0496125_0028106 3300048928 Bacteria 5085
166 Ga0496125_0106531 3300048928 Bacteria 2046
167 Ga0496126_0009359 3300048929 Bacteria 10414
168 Ga0496126_0102542 3300048929 Bacteria 2501
169 Ga0501032_0049820 3300049569 Bacteria 2825
170 Ga0501037_0148213 3300049573 Bacteria 1678
171 Ga0501046_0080227 3300049580 Bacteria 2522
172 Ga0501074_0073406 3300049590 Bacteria 2458
173 Ga0501075_0051892 3300049591 Bacteria 3084
174 Ga0501077_0003238 3300049593 Bacteria 9804
175 Ga0501079_0001921 3300049741 Bacteria 14881
176 Ga0501080_0034521 3300049742 Bacteria 4723
177 Ga0501081_0075644 3300049743 Bacteria 2351
178 nmdc:mga03n38_38086_c1 3300050490 Bacteria 2078
179 nmdc:mga00v17_53786_c1 3300050491 Bacteria 2455
180 nmdc:mga0yw44_66131_c1 3300050492 Bacteria 2230
181 nmdc:mga06z11_1525_c1 3300050494 Bacteria 8592
182 nmdc:mga05p37_95_c1 3300050507 Bacteria 79379
183 nmdc:mga09592_1569_c1 3300050508 Bacteria 18390
184 nmdc:mga0qj67_216886_c1 3300050509 Bacteria 1554
185 nmdc:mga06r32_114_c1 3300050510 Bacteria 57934
186 nmdc:mga06r32_24703_c1 3300050510 Bacteria 5582
187 nmdc:mga06r32_26402_c1 3300050510 Bacteria 5414
188 nmdc:mga06r32_267226_c1 3300050510 Bacteria 1698
189 nmdc:mga06r32_68013_c1 3300050510 Bacteria 3440
190 nmdc:mga08y16_229627_c1 3300050511 Bacteria 1919
191 nmdc:mga08y16_264311_c1 3300050511 Bacteria 1777
192 nmdc:mga08y16_48_c1 3300050511 Bacteria 111306
193 nmdc:mga08y16_87382_c1 3300050511 Bacteria 3248
194 nmdc:mga0n895_122262_c1 3300050512 Bacteria 2625
195 nmdc:mga0n895_92203_c1 3300050512 Bacteria 3032
196 nmdc:mga0rr50_42984_c1 3300050513 Bacteria 3303
197 nmdc:mga08x19_199418_c1 3300050514 Bacteria 1371
198 nmdc:mga0a205_112442_c1 3300050515 Bacteria 2622
199 nmdc:mga0a205_118186_c1 3300050515 Bacteria 2549
200 nmdc:mga0a205_3895_c1 3300050515 Bacteria 13360
201 Ga0501082_0060569 3300060353 Bacteria 3259
202 Ga0501082_0101586 3300060353 Bacteria 2488

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005983 Ga0081540_1000064 Ga0081540_100006421 325
2 3300035691 Ga0373931_0029681 Ga0373931_0029681_1616_2752 325
3 3300006852 Ga0075433_10004977 Ga0075433_100049776 326
4 3300006871 Ga0075434_100040930 Ga0075434_1000409304 326
5 3300009094 Ga0111539_10066626 Ga0111539_100666262 326
6 3300035088 Ga0373940_0003839 Ga0373940_0003839_205_1341 326
7 3300050512 nmdc:mga0n895_122262_c1 nmdc:mga0n895_122262_c1_786_1922 326
8 3300050515 nmdc:mga0a205_3895_c1 nmdc:mga0a205_3895_c1_7773_8909 326
9 3300005341 Ga0070691_10003421 Ga0070691_100034214 333
10 3300005444 Ga0070694_100029397 Ga0070694_1000293972 333
11 3300025972 Ga0207668_10114398 Ga0207668_101143982 333
12 3300026075 Ga0207708_10081778 Ga0207708_100817782 333
13 3300050514 nmdc:mga08x19_199418_c1 nmdc:mga08x19_199418_c1_339_1355 333
14 3300006163 Ga0070715_10009900 Ga0070715_100099002 342
15 3300025905 Ga0207685_10009621 Ga0207685_100096213 342
16 3300031731 Ga0307405_10257696 Ga0307405_102576961 343
17 3300050511 nmdc:mga08y16_264311_c1 nmdc:mga08y16_264311_c1_461_1591 349
18 3300060353 Ga0501082_0060569 Ga0501082_0060569_1703_2827 351
19 3300006847 Ga0075431_100263728 Ga0075431_1002637282 352
20 3300009094 Ga0111539_10024466 Ga0111539_100244661 352
21 3300009147 Ga0114129_10031383 Ga0114129_100313833 352
22 3300050510 nmdc:mga06r32_267226_c1 nmdc:mga06r32_267226_c1_160_1308 352
23 3300003775 Ga0055524_1011697 Ga0055524_10116973 355
24 3300025299 Ga0209256_1002273 Ga0209256_100227314 355
25 3300009174 Ga0105241_10000005 Ga0105241_1000000528 357
26 3300013100 Ga0157373_10010841 Ga0157373_100108414 357
27 3300009011 Ga0105251_10001176 Ga0105251_100011768 358
28 3300013308 Ga0157375_10057785 Ga0157375_100577854 358
29 3300014968 Ga0157379_10142500 Ga0157379_101425002 358
30 3300048914 Ga0496111_0018593 Ga0496111_0018593_363_1502 358
31 iso_pu_bacteria 2772190666 2772438177 358
32 iso_pu_bacteria 2888366609 2888368194 358
33 iso_pu_bacteria 2937967321 2937969917 358
34 iso_pu_bacteria 8004592986 8004597513 358
35 iso_pu_bacteria 8015394850 8015397701 358
36 3300037418 Ga0395900_0056115 Ga0395900_0056115_840_2066 359
37 3300037466 Ga0395898_0025900 Ga0395898_0025900_3897_5123 359
38 3300037471 Ga0395905_0072059 Ga0395905_0072059_663_1889 359
39 3300009011 Ga0105251_10000349 Ga0105251_1000034912 360
40 3300009011 Ga0105251_10001340 Ga0105251_1000134011 360
41 3300009092 Ga0105250_10000601 Ga0105250_1000060110 360
42 3300009101 Ga0105247_10000025 Ga0105247_1000002584 360
43 3300014497 Ga0182008_10061518 Ga0182008_100615182 360
44 3300046453 Ga0495627_000018 Ga0495627_000018_161456_162550 360
45 3300047472 Ga0495686_0106136 Ga0495686_0106136_371_1471 360
46 3300048906 Ga0496103_0009167 Ga0496103_0009167_4287_5381 360
47 3300048919 Ga0496116_0000023 Ga0496116_0000023_346028_347122 360
48 3300048920 Ga0496117_0040295 Ga0496117_0040295_490_1584 360
49 3300048922 Ga0496119_0043940 Ga0496119_0043940_1062_2156 360
50 iso_pu_bacteria 2506520007 2506577652 360
51 iso_pu_bacteria 2506520008 2506582790 360
52 iso_pu_bacteria 2654587920 2656278663 360
53 iso_pu_bacteria 2687453601 2689444146 360
54 iso_pu_bacteria 2869551831 2869553502 360
55 3300006946 Ga0079104_1001960 Ga0079104_100196010 361
56 3300025911 Ga0207654_10000007 Ga0207654_10000007365 361
57 3300027111 Ga0209281_1000027 Ga0209281_1000027451 361
58 iso_pu_bacteria 2891048133 2891050302 361
59 3300046530 Ga0495654_0008485 Ga0495654_0008485_2957_4057 362
60 3300048922 Ga0496119_0001099 Ga0496119_0001099_10936_12036 362
61 3300048922 Ga0496119_0001480 Ga0496119_0001480_19498_20598 362
62 3300048923 Ga0496120_0000052 Ga0496120_0000052_29810_30910 362
63 3300048923 Ga0496120_0000137 Ga0496120_0000137_121006_122106 362
64 3300048927 Ga0496124_0000017 Ga0496124_0000017_108315_109415 362
65 3300060353 Ga0501082_0101586 Ga0501082_0101586_740_1876 362
66 iso_pu_bacteria 2597489875 2597810175 363
67 iso_pu_bacteria 2856342000 2856345199 363
68 iso_pu_bacteria 2888343758 2888343832 363
69 iso_pu_bacteria 2888373701 2888374201 363
70 iso_pu_bacteria 2924754689 2924757955 363
71 iso_pu_bacteria 2970524798 2970525543 363
72 iso_pu_bacteria 2970540015 2970545039 363
73 iso_pu_bacteria 8004395343 8004398817 363
74 3300005336 Ga0070680_100079118 Ga0070680_1000791183 364
75 3300005458 Ga0070681_10125577 Ga0070681_101255772 364
76 3300017792 Ga0163161_10000001 Ga0163161_10000001368 364
77 3300025711 Ga0207696_1000001 Ga0207696_1000001442 364
78 3300025735 Ga0207713_1000092 Ga0207713_100009216 364
79 3300025735 Ga0207713_1000142 Ga0207713_100014287 364
80 3300025900 Ga0207710_10000074 Ga0207710_10000074130 364
81 3300025949 Ga0207667_10115037 Ga0207667_101150373 364
82 iso_pu_bacteria 3000376612 3000379828 364
83 3300005327 Ga0070658_10019750 Ga0070658_100197505 366
84 3300005937 Ga0081455_10002540 Ga0081455_1000254011 366
85 3300009036 Ga0105244_10030539 Ga0105244_100305393 366
86 3300046522 Ga0495643_0002850 Ga0495643_0002850_96_1196 366
87 3300050511 nmdc:mga08y16_87382_c1 nmdc:mga08y16_87382_c1_14_1132 366
88 3300050515 nmdc:mga0a205_112442_c1 nmdc:mga0a205_112442_c1_632_1750 366
89 3300005981 Ga0081538_10010075 Ga0081538_100100753 367
90 3300006847 Ga0075431_100085331 Ga0075431_1000853314 367
91 3300006847 Ga0075431_100098078 Ga0075431_1000980782 367
92 3300007076 Ga0075435_100051643 Ga0075435_1000516433 367
93 3300009094 Ga0111539_10000735 Ga0111539_1000073510 367
94 3300009094 Ga0111539_10135919 Ga0111539_101359193 367
95 3300009147 Ga0114129_10000025 Ga0114129_1000002575 367
96 3300048917 Ga0496114_0006030 Ga0496114_0006030_1978_3084 367
97 3300048920 Ga0496117_0004846 Ga0496117_0004846_6387_7493 367
98 3300048921 Ga0496118_0013855 Ga0496118_0013855_105_1211 367
99 3300048925 Ga0496122_0012157 Ga0496122_0012157_1153_2259 367
100 3300048926 Ga0496123_0001278 Ga0496123_0001278_28497_29603 367
101 3300048928 Ga0496125_0028106 Ga0496125_0028106_2990_4096 367
102 3300050509 nmdc:mga0qj67_216886_c1 nmdc:mga0qj67_216886_c1_23_1162 367
103 3300050510 nmdc:mga06r32_68013_c1 nmdc:mga06r32_68013_c1_1342_2469 367
104 3300050511 nmdc:mga08y16_229627_c1 nmdc:mga08y16_229627_c1_247_1371 367
105 3300050512 nmdc:mga0n895_92203_c1 nmdc:mga0n895_92203_c1_871_1992 367
106 3300050513 nmdc:mga0rr50_42984_c1 nmdc:mga0rr50_42984_c1_1746_2885 367
107 iso_pu_bacteria 2524614729 2525557048 367
108 iso_pu_bacteria 2627854209 2630648644 367
109 3300005466 Ga0070685_10001111 Ga0070685_1000111114 368
110 3300005719 Ga0068861_100037920 Ga0068861_1000379202 368
111 3300006042 Ga0075368_10003438 Ga0075368_100034382 368
112 3300006042 Ga0075368_10016916 Ga0075368_100169161 368
113 3300006178 Ga0075367_10005424 Ga0075367_100054244 368
114 3300006178 Ga0075367_10068687 Ga0075367_100686871 368
115 3300006844 Ga0075428_100001027 Ga0075428_1000010276 368
116 3300006844 Ga0075428_100011136 Ga0075428_1000111369 368
117 3300006847 Ga0075431_100000017 Ga0075431_10000001743 368
118 3300006847 Ga0075431_100023792 Ga0075431_1000237922 368
119 3300006880 Ga0075429_100008600 Ga0075429_1000086007 368
120 3300009147 Ga0114129_10060809 Ga0114129_100608093 368
121 3300025972 Ga0207668_10036612 Ga0207668_100366123 368
122 3300026118 Ga0207675_100044501 Ga0207675_1000445013 368
123 3300050490 nmdc:mga03n38_38086_c1 nmdc:mga03n38_38086_c1_160_1302 368
124 3300050491 nmdc:mga00v17_53786_c1 nmdc:mga00v17_53786_c1_1230_2372 368
125 3300050492 nmdc:mga0yw44_66131_c1 nmdc:mga0yw44_66131_c1_1053_2195 368
126 3300050494 nmdc:mga06z11_1525_c1 nmdc:mga06z11_1525_c1_7406_8551 368
127 3300050507 nmdc:mga05p37_95_c1 nmdc:mga05p37_95_c1_42479_43615 368
128 3300050508 nmdc:mga09592_1569_c1 nmdc:mga09592_1569_c1_531_1667 368
129 3300050510 nmdc:mga06r32_114_c1 nmdc:mga06r32_114_c1_7732_8868 368
130 3300050510 nmdc:mga06r32_24703_c1 nmdc:mga06r32_24703_c1_4045_5187 368
131 3300050510 nmdc:mga06r32_26402_c1 nmdc:mga06r32_26402_c1_921_2066 368
132 3300050511 nmdc:mga08y16_48_c1 nmdc:mga08y16_48_c1_88808_89944 368
133 3300050515 nmdc:mga0a205_118186_c1 nmdc:mga0a205_118186_c1_1366_2505 368
134 iso_pu_bacteria 2897803580 2897805015 368
135 3300006847 Ga0075431_100043697 Ga0075431_1000436975 369
136 3300047472 Ga0495686_0000007 Ga0495686_0000007_95990_97231 369
137 3300048907 Ga0496104_0005038 Ga0496104_0005038_9469_10614 369
138 3300048909 Ga0496106_0001458 Ga0496106_0001458_2875_4092 369
139 3300048910 Ga0496107_0000038 Ga0496107_0000038_38056_39273 369
140 3300048913 Ga0496110_0019139 Ga0496110_0019139_41_1186 369
141 iso_pu_bacteria 2597490356 2599106610 369
142 iso_pu_bacteria 2846952575 2846958255 369
143 iso_pu_bacteria 2848858292 2848864737 369
144 3300003322 rootL2_10027795 rootL2_100277955 370
145 3300003771 Ga0055526_1023438 Ga0055526_10234382 370
146 3300005262 Ga0065165_1001209 Ga0065165_10012092 370
147 3300005563 Ga0068855_100050537 Ga0068855_1000505374 370
148 3300005563 Ga0068855_100083163 Ga0068855_1000831632 370
149 3300005616 Ga0068852_100031034 Ga0068852_1000310343 370
150 3300009093 Ga0105240_10114654 Ga0105240_101146542 370
151 3300014326 Ga0157380_10117610 Ga0157380_101176102 370
152 3300025295 Ga0209564_1001157 Ga0209564_10011577 370
153 3300025912 Ga0207707_10101422 Ga0207707_101014222 370
154 3300025913 Ga0207695_10020138 Ga0207695_100201383 370
155 3300025949 Ga0207667_10009086 Ga0207667_100090863 370
156 3300026095 Ga0207676_10007002 Ga0207676_100070025 370
157 3300046460 Ga0495638_0000301 Ga0495638_0000301_55038_56255 370
158 3300046460 Ga0495638_0046559 Ga0495638_0046559_202_1425 370
159 3300046512 Ga0495610_0000111 Ga0495610_0000111_32592_33809 370
160 3300046519 Ga0495632_0003546 Ga0495632_0003546_5953_7170 370
161 3300046522 Ga0495643_0015144 Ga0495643_0015144_853_2070 370
162 3300046616 Ga0495668_0037561 Ga0495668_0037561_133_1350 370
163 3300046660 Ga0495625_0003180 Ga0495625_0003180_4699_5916 370
164 3300047320 Ga0495672_0000541 Ga0495672_0000541_37902_39119 370
165 3300048924 Ga0496121_0004382 Ga0496121_0004382_1452_2669 370
166 3300049580 Ga0501046_0080227 Ga0501046_0080227_349_1494 370
167 3300049591 Ga0501075_0051892 Ga0501075_0051892_223_1368 370
168 3300049593 Ga0501077_0003238 Ga0501077_0003238_2148_3293 370
169 3300049741 Ga0501079_0001921 Ga0501079_0001921_8418_9563 370
170 3300049742 Ga0501080_0034521 Ga0501080_0034521_2123_3268 370
171 3300049743 Ga0501081_0075644 Ga0501081_0075644_636_1781 370
172 3300046513 Ga0495616_0000143 Ga0495616_0000143_57263_58483 371
173 3300049590 Ga0501074_0073406 Ga0501074_0073406_82_1236 371
174 iso_pu_bacteria 2738543020 2739286146 371
175 iso_pu_bacteria 2738543021 2739291459 371
176 iso_pu_bacteria 2842805378 2842808711 371
177 3300042013 Ga0439456_005606 Ga0439456_005606_543_1670 373
178 3300042115 Ga0450911_000002 Ga0450911_000002_185777_186904 373
179 3300048915 Ga0496112_0154707 Ga0496112_0154707_11_1216 373
180 3300048927 Ga0496124_0162812 Ga0496124_0162812_449_1573 373
181 3300013104 Ga0157370_10000055 Ga0157370_1000005521 374
182 3300042530 Ga0450916_000577 Ga0450916_000577_1833_2990 374
183 3300046522 Ga0495643_0000202 Ga0495643_0000202_8072_9214 374
184 3300046522 Ga0495643_0004711 Ga0495643_0004711_4449_5591 374
185 3300048914 Ga0496111_0014492 Ga0496111_0014492_3701_4909 374
186 iso_pu_bacteria 2808606379 2808939363 374
187 3300046507 Ga0495606_0000845 Ga0495606_0000845_33541_34686 375
188 3300046694 Ga0495649_0001682 Ga0495649_0001682_3860_5005 375
189 iso_pu_bacteria 2554235231 2555246008 375
190 3300015261 Ga0182006_1002335 Ga0182006_10023354 376
191 iso_pu_bacteria 2554235132 2554816633 376
192 iso_pu_bacteria 2606217733 2608380065 376
193 iso_pu_bacteria 2931369376 2931375537 376
194 3300049569 Ga0501032_0049820 Ga0501032_0049820_397_1533 377
195 3300049573 Ga0501037_0148213 Ga0501037_0148213_258_1394 377
196 iso_pu_bacteria 2600254954 2600442830 377
197 iso_pu_bacteria 2600255389 2602010270 377
198 iso_pu_bacteria 2823421272 2823422795 377
199 iso_pu_bacteria 2919501602 2919504798 377
200 iso_pu_bacteria 2926063275 2926066475 377
201 iso_pu_bacteria 651053060 651175346 377
202 iso_pu_bacteria 2511231024 2511376078 378
203 iso_pu_bacteria 2765235841 2765583051 378
204 iso_pu_bacteria 2806310737 2807407637 378
205 iso_pu_bacteria 2806310745 2807455952 378
206 iso_pu_bacteria 3007803356 3007808829 378
207 iso_pu_bacteria 8034962539 8034966059 378
208 iso_pu_bacteria 8054929484 8054932189 378
209 iso_pu_bacteria 8056115690 8056119557 378
210 iso_pu_bacteria 8056120720 8056122660 378
211 iso_pu_bacteria 8056137416 8056141099 378
212 3300009036 Ga0105244_10016737 Ga0105244_100167372 381
213 3300013104 Ga0157370_10039452 Ga0157370_100394522 381
214 3300025728 Ga0207655_1000216 Ga0207655_100021623 381
215 3300031548 Ga0307408_100000260 Ga0307408_10000026055 381
216 2162886007 SwRhRL2b_contig_3452937 SwRhRL2b_0128.00001530 382
217 3300005289 Ga0065704_10073552 Ga0065704_100735523 382
218 3300009011 Ga0105251_10002128 Ga0105251_1000212812 382
219 3300009092 Ga0105250_10019530 Ga0105250_100195303 382
220 3300009148 Ga0105243_10039628 Ga0105243_100396283 382
221 3300025292 Ga0209676_1000701 Ga0209676_100070122 382
222 3300025711 Ga0207696_1000019 Ga0207696_1000019384 382
223 3300025711 Ga0207696_1017717 Ga0207696_10177172 382
224 3300025728 Ga0207655_1000295 Ga0207655_100029513 382
225 3300025735 Ga0207713_1004709 Ga0207713_10047094 382
226 3300025735 Ga0207713_1006006 Ga0207713_10060065 382
227 3300025735 Ga0207713_1021148 Ga0207713_10211483 382
228 3300025735 Ga0207713_1023067 Ga0207713_10230672 382
229 3300025735 Ga0207713_1037476 Ga0207713_10374762 382
230 3300025935 Ga0207709_10033265 Ga0207709_100332652 382
231 3300027312 Ga0209371_1002515 Ga0209371_10025158 382
232 3300030500 Ga0268256_1001662 Ga0268256_100166210 382
233 3300042533 Ga0450901_000095 Ga0450901_000095_4851_6002 382
234 3300046515 Ga0495620_0000035 Ga0495620_0000035_41866_43014 382
235 3300046519 Ga0495632_0001602 Ga0495632_0001602_8153_9301 382
236 3300046522 Ga0495643_0000558 Ga0495643_0000558_8611_9759 382
237 3300046524 Ga0495648_0000548 Ga0495648_0000548_30610_31758 382
238 3300048913 Ga0496110_0007079 Ga0496110_0007079_433_1581 382
239 3300048913 Ga0496110_0071339 Ga0496110_0071339_1837_2985 382
240 3300048917 Ga0496114_0025586 Ga0496114_0025586_53_1201 382
241 3300048919 Ga0496116_0011307 Ga0496116_0011307_4622_5770 382
242 3300048920 Ga0496117_0001266 Ga0496117_0001266_26926_28074 382
243 3300048920 Ga0496117_0006744 Ga0496117_0006744_1702_2850 382
244 3300048921 Ga0496118_0007380 Ga0496118_0007380_1870_3018 382
245 3300048926 Ga0496123_0023549 Ga0496123_0023549_2485_3633 382
246 3300048927 Ga0496124_0002164 Ga0496124_0002164_10393_11541 382
247 3300048927 Ga0496124_0003671 Ga0496124_0003671_14526_15674 382
248 3300048928 Ga0496125_0000840 Ga0496125_0000840_46520_47668 382
249 3300048928 Ga0496125_0022405 Ga0496125_0022405_2097_3245 382
250 3300048928 Ga0496125_0106531 Ga0496125_0106531_531_1679 382
251 3300048929 Ga0496126_0009359 Ga0496126_0009359_8450_9598 382
252 3300048929 Ga0496126_0102542 Ga0496126_0102542_22_1170 382
253 iso_pu_bacteria 2739367655 2739612800 382
254 iso_pu_bacteria 2881927736 2881928045 382

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07995

GSDH

Glucose / Sorbosone dehydrogenase

81

411

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cgz-assembly1.cif.gz_B glucose dehydrogenase 0.9907 36 380
7cdy-assembly1.cif.gz_A crystal structure of glucose dehydrogenase 0.9903 36 380
7cdy-assembly2.cif.gz_B crystal structure of glucose dehydrogenase 0.9885 36 380
2g8s-assembly2.cif.gz_B crystal structure of the soluble aldose sugar dehydrogenase (asd) from escherichia coli in the apo-form 0.9856 35 380
7cdy-assembly1.cif.gz_A crystal structure of glucose dehydrogenase 0.9846 36 380
ID Description Score Start End Superfamily
af_P75804_19_370_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.9783 29 380 2.120.10.30
af_P75804_19_370_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.9755 29 380 2.120.10.30
3a9gA00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8934 25 382 2.120.10.30
3a9gA00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8909 25 382 2.120.10.30
2ismB00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8692 35 378 2.120.10.30
ID Description Score Start End GO Terms
AF-A0A4Q6F5T7-F1-model_v4 deleted 0.9921 81 380
AF-F8H4E2-F1-model_v4 Hydrophobic compound transport factor 0.991 49 382
AF-A0A836NWW2-F1-model_v4 deleted 0.9907 29 380
AF-A0A261SI32-F1-model_v4 Oxidoreductase 0.9905 35 382
AF-A0A3D3M282-F1-model_v4 Oxidoreductase 0.9903 67 381

Feature Viewer

pLDDT pTM Quality
92.07 0.9 High
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Predicted Structure (AlphaFold2)

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