F364479

General Info

Members Datasets Scaffolds Average Seq Length
253 176 235 570

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2585427594|2585847547
Length 620
Sequence ILAYLGGVLTIVSPCILPVLPFVFARAGQPFLRSTLPMLVGMAATFAAVATLAALGGGWAVQANEYGRYAALVLLAVFGVILLFPALSDYLTRPLVSLGARLSQSADRGTRSGGSTVAASALLGVATGLLWAPCAGPVLGLILTGAALQGASVGTTLLLLAYALGAATSLALALLIGGRVYQAMKRSLGVGEWVRRGLGVAVLAAVVAIGLGLDTDFLTQASLASTGTLEQRLIDKLHPQQQAAENAGSVVMKGDAMSGSNQMMMSGNAPAMMAGNNAMMAGSNAMMMKGGPKTAATEALPVEGTMPSLDGAVQWLNSPPLSAQSLKGKVVLVDFWTYSCINCLRAIPYVRAWAEKYKDQGLVVIGVHAPEFAFEKNIDNVKKAIGDLKITYPVAIDNDYAIWRAFENQYWPAHYFIDAEGRVRHHHFGEGDYDGSERVIQQLLAEAGKANVAADVVEVKATGAEAASNQADVQSPETYVGWQRSENFVDQKGTVNDAAHTYVAATPRLNEWGLTGNWTVGSEQAALNDKDGSIYYRFHARDLHLVLGPGADGKPVRFQVTVDGKPPGDGHGADTDADGNGTVTAQRLYQLIREPGAVGDHTFEIRFLDPGVQAYAFTFG

Samples

Sample ID Description Type Environment
1 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
2 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
3 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
4 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
5 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
6 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
7 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
8 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
9 2643221599 Rhizobium sp. Root708 Isolate Unclassified
10 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
11 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
12 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
13 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
14 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
15 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
16 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
17 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
18 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
19 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
20 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
21 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
22 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
23 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
24 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
25 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
26 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
27 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
28 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
29 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
30 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
31 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
32 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
33 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
34 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
35 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
38 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
61 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
62 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
63 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
64 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
65 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
66 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
67 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
68 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
69 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
71 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
74 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
76 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
94 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
95 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
96 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
97 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
98 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
99 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
100 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
101 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
102 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
103 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
108 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
109 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
110 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
111 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
112 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
113 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
114 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
115 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
116 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
117 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
118 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
121 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
122 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
123 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
124 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
125 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
126 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
127 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
134 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
135 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
136 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
137 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
138 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
139 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
140 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
141 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
154 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
162 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
163 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
164 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
165 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
166 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
167 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
168 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
169 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
170 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
171 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
172 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
173 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
174 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
175 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
176 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.49
Metatranscriptomes 0.4
Isolates 7.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 24.51
Nodule 2.37
Rhizoplane 1.19
Rhizosphere 56.13
Stem 0
Stem Tuber 0
Unclassified 15.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000739 3300002737 Bacteria 22397
2 JGI25158J39367_1000156 3300002739 Bacteria 16077
3 JGI25152J39213_1000656 3300002773 Bacteria 18117
4 JGI25152J39213_1004462 3300002773 Bacteria 4403
5 JGI25152J39213_1006467 3300002773 Bacteria 3188
6 JGI25150J39212_1000024 3300002774 Bacteria 129646
7 JGI25159J45721_1002256 3300002987 Bacteria 7440
8 JGI25151J46595_10000027 3300003187 Bacteria 208739
9 JGI25151J46595_10000171 3300003187 Bacteria 84127
10 JGI25151J46595_10008965 3300003187 Bacteria 4772
11 JGI25165J46597_1001870 3300003214 Bacteria 8642
12 JGI25153J46596_10000314 3300003215 Bacteria 35749
13 JGI25153J46596_10019565 3300003215 Bacteria 2588
14 JGI25160J50197_1000001 3300003354 Bacteria 782301
15 JGI25161J50226_1000001 3300003374 Bacteria 655036
16 JGI25161J50226_1000129 3300003374 Bacteria 53598
17 Ga0032354_1041850 3300003693 Bacteria 3161
18 Ga0055524_1008216 3300003775 Bacteria 4356
19 Ga0055524_1020704 3300003775 Bacteria 2206
20 Ga0055528_1000267 3300003790 Bacteria 44269
21 Ga0055543_1000029 3300004625 Bacteria 131452
22 Ga0055543_1000089 3300004625 Bacteria 79924
23 Ga0065165_1000008 3300005262 Bacteria 334429
24 Ga0065165_1004050 3300005262 Bacteria 9519
25 Ga0068868_100036447 3300005338 Bacteria 3807
26 Ga0070661_100001951 3300005344 Bacteria 14271
27 Ga0070692_10002929 3300005345 Bacteria 6779
28 Ga0070668_100000094 3300005347 Bacteria 56388
29 Ga0070667_100000025 3300005367 Bacteria 190744
30 Ga0070713_100069223 3300005436 Bacteria 2975
31 Ga0070663_100007180 3300005455 Bacteria 6767
32 Ga0070665_100008662 3300005548 Bacteria 10295
33 Ga0068855_100060114 3300005563 Bacteria 4445
34 Ga0070664_100029002 3300005564 Bacteria 4610
35 Ga0070664_100030302 3300005564 Bacteria 4513
36 Ga0068854_100009764 3300005578 Bacteria 6205
37 Ga0068856_100041885 3300005614 Bacteria 4502
38 Ga0068863_100000067 3300005841 Bacteria 117275
39 Ga0068858_100016396 3300005842 Bacteria 6956
40 Ga0068860_100053771 3300005843 Bacteria 3828
41 Ga0068862_100165425 3300005844 Bacteria 1977
42 Ga0081540_1025460 3300005983 Bacteria 3403
43 Ga0105245_10029537 3300009098 Bacteria 4845
44 Ga0105242_10003188 3300009176 Bacteria 12787
45 Ga0105248_10064596 3300009177 Bacteria 4109
46 Ga0157370_10017412 3300013104 Bacteria 7250
47 Ga0157369_10004099 3300013105 Bacteria 17261
48 Ga0171462_1036 3300013250 Bacteria 79177
49 Ga0157374_10083019 3300013296 Bacteria 3043
50 Ga0163162_10129246 3300013306 Bacteria 2634
51 Ga0182008_10000730 3300014497 Bacteria 23330
52 Ga0157376_10049567 3300014969 Bacteria 3479
53 Ga0163161_10004635 3300017792 Bacteria 9565
54 Ga0163161_10011078 3300017792 Bacteria 6245
55 Ga0213873_10000010 3300021358 Bacteria 223024
56 Ga0213872_10003483 3300021361 Bacteria 8724
57 Ga0213876_10000027 3300021384 Bacteria 223024
58 Ga0213876_10000274 3300021384 Bacteria 47640
59 Ga0213871_10002073 3300021441 Bacteria 3601
60 Ga0209436_100026 3300025208 Bacteria 90859
61 Ga0209437_100104 3300025233 Bacteria 220736
62 Ga0207425_1000043 3300025245 Bacteria 208791
63 Ga0209129_1000019 3300025258 Bacteria 460802
64 Ga0209129_1000072 3300025258 Bacteria 208805
65 Ga0209129_1000641 3300025258 Bacteria 23426
66 Ga0209233_1000054 3300025261 Bacteria 439669
67 Ga0209673_1000138 3300025273 Bacteria 158321
68 Ga0209673_1008063 3300025273 Bacteria 4740
69 Ga0209130_1000003 3300025284 Bacteria 677988
70 Ga0209130_1000030 3300025284 Bacteria 323323
71 Ga0209130_1001537 3300025284 Bacteria 14748
72 Ga0209025_1000120 3300025294 Bacteria 208791
73 Ga0209025_1000215 3300025294 Bacteria 138335
74 Ga0209025_1000309 3300025294 Bacteria 108378
75 Ga0209025_1005771 3300025294 Bacteria 9928
76 Ga0209564_1000207 3300025295 Bacteria 135313
77 Ga0209758_1000111 3300025297 Bacteria 208790
78 Ga0209758_1000586 3300025297 Bacteria 56819
79 Ga0209758_1007004 3300025297 Bacteria 7842
80 Ga0209256_1006152 3300025299 Bacteria 6492
81 Ga0207426_1000011 3300025302 Bacteria 791203
82 Ga0207426_1000047 3300025302 Bacteria 417011
83 Ga0207426_1000092 3300025302 Bacteria 278907
84 Ga0209051_1006355 3300025303 Bacteria 6685
85 Ga0209257_1003674 3300025304 Bacteria 12823
86 Ga0207680_10015270 3300025903 Bacteria 4004
87 Ga0207705_10017890 3300025909 Bacteria 5069
88 Ga0207693_10037295 3300025915 Bacteria 3831
89 Ga0207693_10042096 3300025915 Bacteria 3596
90 Ga0207679_10007261 3300025945 Bacteria 7020
91 Ga0207667_10049561 3300025949 Bacteria 4435
92 Ga0207668_10000058 3300025972 Bacteria 92179
93 Ga0207658_10000023 3300025986 Bacteria 190806
94 Ga0207677_10029997 3300026023 Bacteria 3465
95 Ga0207678_10001454 3300026067 Bacteria 21739
96 Ga0207678_10017373 3300026067 Bacteria 6316
97 Ga0207641_10000119 3300026088 Bacteria 117312
98 Ga0207683_10071230 3300026121 Bacteria 3072
99 Ga0209179_1000461 3300027512 Bacteria 4131
100 Ga0268264_10002037 3300028381 Bacteria 18071
101 Ga0307515_10004490 3300028794 Bacteria 28866
102 Ga0265338_10012061 3300028800 Bacteria 9884
103 Ga0307512_10024539 3300030522 Bacteria 5363
104 Ga0265328_10000375 3300031239 Bacteria 20819
105 Ga0265325_10041526 3300031241 Bacteria 2410
106 Ga0265331_10001219 3300031250 Bacteria 19343
107 Ga0265331_10024112 3300031250 Bacteria 3082
108 Ga0265316_10028316 3300031344 Bacteria 4623
109 Ga0307513_10009932 3300031456 Bacteria 12005
110 Ga0265313_10001910 3300031595 Bacteria 18906
111 Ga0265314_10012877 3300031711 Bacteria 6796
112 Ga0307405_10007302 3300031731 Bacteria 5511
113 Ga0307410_10003097 3300031852 Bacteria 8243
114 Ga0307412_10001221 3300031911 Bacteria 14607
115 Ga0307409_100106362 3300031995 Bacteria 2341
116 Ga0373925_0099995 3300037068 Bacteria 2228
117 Ga0436365_0257402 3300039437 Bacteria 164674
118 Ga0436365_0662033 3300039437 Bacteria 58921
119 Ga0436360_0865099 3300039438 Bacteria 6303
120 Ga0436361_0325467 3300039447 Bacteria 21727
121 Ga0436362_0553655 3300039453 Bacteria 122937
122 Ga0436362_1110226 3300039453 Bacteria 6588
123 Ga0495627_000853 3300046453 Bacteria 21817
124 Ga0495592_0000021 3300046454 Bacteria 140462
125 Ga0495638_0001228 3300046460 Bacteria 24256
126 Ga0495650_0001148 3300046471 Bacteria 28561
127 Ga0495582_0007053 3300046473 Bacteria 6245
128 Ga0495662_0023461 3300046476 Bacteria 2979
129 Ga0495583_0000010 3300046506 Bacteria 353523
130 Ga0495606_0002026 3300046507 Bacteria 24855
131 Ga0495606_0003118 3300046507 Bacteria 17997
132 Ga0495606_0010066 3300046507 Bacteria 7903
133 Ga0495610_0001130 3300046512 Bacteria 24312
134 Ga0495610_0001584 3300046512 Bacteria 20017
135 Ga0495630_0005144 3300046517 Bacteria 9211
136 Ga0495631_0000369 3300046518 Bacteria 30975
137 Ga0495632_0002831 3300046519 Bacteria 12830
138 Ga0495640_0029139 3300046533 Bacteria 3967
139 Ga0495586_0023957 3300046535 Bacteria 3259
140 Ga0495634_0093837 3300046642 Bacteria 1945
141 Ga0495670_0007608 3300046691 Bacteria 5326
142 Ga0495660_0004923 3300046810 Bacteria 8048
143 Ga0495636_0000224 3300047318 Bacteria 22445
144 Ga0495674_0085426 3300047319 Bacteria 2703
145 Ga0495686_0000084 3300047472 Bacteria 198253
146 Ga0495686_0001276 3300047472 Bacteria 28479
147 Ga0495686_0001737 3300047472 Bacteria 22364
148 Ga0495686_0005516 3300047472 Bacteria 9954
149 Ga0495686_0045269 3300047472 Bacteria 2784
150 Ga0496106_0000244 3300048909 Bacteria 37887
151 Ga0496113_0064106 3300048916 Bacteria 2778
152 Ga0496115_0010320 3300048918 Bacteria 6973
153 Ga0496116_0000536 3300048919 Bacteria 51012
154 Ga0496116_0001788 3300048919 Bacteria 23378
155 Ga0496116_0002009 3300048919 Bacteria 21869
156 Ga0496116_0023046 3300048919 Bacteria 4646
157 Ga0496117_0001801 3300048920 Bacteria 29132
158 Ga0496117_0006267 3300048920 Bacteria 12122
159 Ga0496117_0008389 3300048920 Bacteria 9821
160 Ga0496118_0002860 3300048921 Bacteria 22520
161 Ga0496118_0006839 3300048921 Bacteria 12375
162 Ga0496118_0046823 3300048921 Bacteria 3359
163 Ga0496120_0007791 3300048923 Bacteria 7911
164 Ga0496121_0000017 3300048924 Bacteria 546415
165 Ga0496121_0000367 3300048924 Bacteria 92745
166 Ga0496121_0005368 3300048924 Bacteria 16472
167 Ga0496121_0006278 3300048924 Bacteria 14863
168 Ga0496121_0006303 3300048924 Bacteria 14822
169 Ga0496121_0009377 3300048924 Bacteria 11267
170 Ga0496121_0010796 3300048924 Bacteria 10235
171 Ga0496121_0015387 3300048924 Bacteria 8018
172 Ga0496121_0051211 3300048924 Bacteria 3479
173 Ga0496122_0016730 3300048925 Bacteria 6911
174 Ga0496122_0016983 3300048925 Bacteria 6837
175 Ga0496123_0009518 3300048926 Bacteria 8740
176 Ga0496123_0035561 3300048926 Bacteria 3546
177 Ga0496124_0014009 3300048927 Bacteria 7780
178 Ga0496124_0036770 3300048927 Bacteria 4266
179 Ga0496125_0029142 3300048928 Bacteria 4967
180 Ga0496125_0042692 3300048928 Bacteria 3858
181 Ga0496125_0062319 3300048928 Bacteria 2983
182 Ga0496126_0021175 3300048929 Bacteria 6357
183 Ga0496126_0138138 3300048929 Bacteria 2100
184 Ga0495678_004911 3300049459 Bacteria 7557
185 Ga0501032_0007753 3300049569 Bacteria 7827
186 Ga0501033_0018977 3300049570 Bacteria 5198
187 Ga0501033_0023353 3300049570 Bacteria 4664
188 Ga0501034_0017265 3300049571 Bacteria 7403
189 Ga0501034_0065102 3300049571 Bacteria 3657
190 Ga0501034_0102376 3300049571 Bacteria 2857
191 Ga0501034_0110519 3300049571 Bacteria 2739
192 Ga0501034_0171967 3300049571 Bacteria 2133
193 Ga0501036_0035309 3300049572 Bacteria 4230
194 Ga0501036_0040565 3300049572 Bacteria 3937
195 Ga0501036_0100887 3300049572 Bacteria 2441
196 Ga0501037_0025511 3300049573 Bacteria 4367
197 Ga0501038_0004451 3300049574 Bacteria 13023
198 Ga0501038_0065703 3300049574 Bacteria 3090
199 Ga0501039_0016195 3300049575 Bacteria 5711
200 Ga0501043_0033711 3300049579 Bacteria 4029
201 Ga0501043_0070862 3300049579 Bacteria 2738
202 Ga0501047_0033156 3300049581 Bacteria 4985
203 Ga0501047_0075320 3300049581 Bacteria 3247
204 Ga0501047_0094005 3300049581 Bacteria 2877
205 Ga0501047_0117551 3300049581 Bacteria 2540
206 Ga0501067_0003336 3300049583 Bacteria 8826
207 Ga0501070_0006331 3300049586 Bacteria 10072
208 Ga0501073_0024787 3300049589 Bacteria 4306
209 Ga0501074_0003265 3300049590 Bacteria 11456
210 Ga0501080_0001870 3300049742 Bacteria 18106
211 Ga0501080_0043786 3300049742 Bacteria 4168
212 Ga0501083_0001435 3300049744 Bacteria 16264
213 Ga0501083_0021871 3300049744 Bacteria 4441
214 Ga0501035_0015904 3300049822 Bacteria 6943
215 Ga0501035_0032955 3300049822 Bacteria 4712
216 Ga0501035_0054649 3300049822 Bacteria 3567
217 Ga0501035_0155379 3300049822 Bacteria 1983
218 Ga0501044_0003373 3300049823 Bacteria 18009
219 Ga0501044_0005215 3300049823 Bacteria 14460
220 Ga0501044_0169659 3300049823 Bacteria 2154
221 Ga0495601_0060524 3300053077 Bacteria 2403
222 Ga0500578_0024127 3300053086 Bacteria 3907
223 Ga0500643_000021 3300053087 Bacteria 284326
224 Ga0500651_0000826 3300053093 Bacteria 15169
225 Ga0500641_0004471 3300053096 Bacteria 4944
226 Ga0500555_000032 3300053103 Bacteria 97468
227 Ga0500618_002834 3300053125 Bacteria 6244
228 Ga0500642_0002048 3300053130 Bacteria 5846
229 Ga0500658_0009601 3300053134 Bacteria 3567
230 Ga0500568_0002063 3300053139 Bacteria 12179
231 Ga0500577_0000018 3300053142 Bacteria 48454
232 Ga0500590_011914 3300053148 Bacteria 4419
233 Ga0500616_0017608 3300053153 Bacteria 4052
234 Ga0500636_0000119 3300053177 Bacteria 41322
235 Ga0501082_0039308 3300060353 Bacteria 4081

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048924 Ga0496121_0005368 Ga0496121_0005368_14078_15757 501
2 3300048927 Ga0496124_0036770 Ga0496124_0036770_2078_3757 501
3 3300014969 Ga0157376_10049567 Ga0157376_100495671 515
4 3300025294 Ga0209025_1005771 Ga0209025_10057715 519
5 3300003790 Ga0055528_1000267 Ga0055528_100026727 521
6 3300025273 Ga0209673_1000138 Ga0209673_100013819 521
7 3300049571 Ga0501034_0171967 Ga0501034_0171967_500_2122 528
8 3300028794 Ga0307515_10004490 Ga0307515_1000449013 530
9 3300047472 Ga0495686_0001737 Ga0495686_0001737_16512_18380 532
10 3300002773 JGI25152J39213_1004462 JGI25152J39213_10044623 534
11 3300003187 JGI25151J46595_10008965 JGI25151J46595_100089652 534
12 3300025258 Ga0209129_1000019 Ga0209129_1000019361 534
13 3300025294 Ga0209025_1000309 Ga0209025_100030944 534
14 3300046507 Ga0495606_0003118 Ga0495606_0003118_6881_8821 534
15 3300048924 Ga0496121_0010796 Ga0496121_0010796_2113_4053 534
16 3300002739 JGI25158J39367_1000156 JGI25158J39367_10001563 536
17 3300002773 JGI25152J39213_1006467 JGI25152J39213_10064671 536
18 3300002987 JGI25159J45721_1002256 JGI25159J45721_10022565 536
19 3300003374 JGI25161J50226_1000129 JGI25161J50226_100012944 536
20 3300004625 Ga0055543_1000029 Ga0055543_1000029113 536
21 3300025208 Ga0209436_100026 Ga0209436_10002673 536
22 3300025258 Ga0209129_1000641 Ga0209129_10006417 536
23 3300025284 Ga0209130_1000030 Ga0209130_100003014 536
24 3300025297 Ga0209758_1000586 Ga0209758_100058639 536
25 3300025302 Ga0207426_1000047 Ga0207426_1000047386 536
26 3300025303 Ga0209051_1006355 Ga0209051_10063553 536
27 3300005345 Ga0070692_10002929 Ga0070692_100029299 537
28 3300026023 Ga0207677_10029997 Ga0207677_100299973 537
29 3300003775 Ga0055524_1020704 Ga0055524_10207041 538
30 3300025273 Ga0209673_1008063 Ga0209673_10080632 538
31 3300025295 Ga0209564_1000207 Ga0209564_1000207115 538
32 3300025299 Ga0209256_1006152 Ga0209256_10061523 538
33 3300031456 Ga0307513_10009932 Ga0307513_100099328 541
34 3300021384 Ga0213876_10000274 Ga0213876_1000027444 542
35 3300030522 Ga0307512_10024539 Ga0307512_100245392 542
36 3300039437 Ga0436365_0257402 Ga0436365_0257402_113591_115303 542
37 3300046471 Ga0495650_0001148 Ga0495650_0001148_18246_19988 542
38 3300048924 Ga0496121_0006303 Ga0496121_0006303_383_2311 542
39 3300049571 Ga0501034_0017265 Ga0501034_0017265_524_2248 544
40 3300049581 Ga0501047_0033156 Ga0501047_0033156_1420_3141 546
41 3300025304 Ga0209257_1003674 Ga0209257_10036748 547
42 3300049823 Ga0501044_0169659 Ga0501044_0169659_373_2097 548
43 3300005344 Ga0070661_100001951 Ga0070661_1000019514 549
44 3300005347 Ga0070668_100000094 Ga0070668_1000000946 549
45 3300005367 Ga0070667_100000025 Ga0070667_1000000256 549
46 3300005455 Ga0070663_100007180 Ga0070663_1000071807 549
47 3300005564 Ga0070664_100029002 Ga0070664_1000290025 549
48 3300005578 Ga0068854_100009764 Ga0068854_1000097642 549
49 3300005841 Ga0068863_100000067 Ga0068863_1000000676 549
50 3300005843 Ga0068860_100053771 Ga0068860_1000537714 549
51 3300005844 Ga0068862_100165425 Ga0068862_1001654252 549
52 3300013296 Ga0157374_10083019 Ga0157374_100830193 549
53 3300021361 Ga0213872_10003483 Ga0213872_100034839 549
54 3300025903 Ga0207680_10015270 Ga0207680_100152702 549
55 3300025909 Ga0207705_10017890 Ga0207705_100178902 549
56 3300025945 Ga0207679_10007261 Ga0207679_100072617 549
57 3300025972 Ga0207668_10000058 Ga0207668_1000005887 549
58 3300025986 Ga0207658_10000023 Ga0207658_100000236 549
59 3300026067 Ga0207678_10001454 Ga0207678_1000145414 549
60 3300026088 Ga0207641_10000119 Ga0207641_10000119112 549
61 3300028381 Ga0268264_10002037 Ga0268264_100020374 549
62 3300039447 Ga0436361_0325467 Ga0436361_0325467_9748_11511 549
63 3300047472 Ga0495686_0001276 Ga0495686_0001276_13684_15393 549
64 3300005262 Ga0065165_1004050 Ga0065165_10040509 550
65 3300013250 Ga0171462_1036 Ga0171462_103627 550
66 3300046454 Ga0495592_0000021 Ga0495592_0000021_37335_39149 550
67 3300046512 Ga0495610_0001584 Ga0495610_0001584_11735_13588 550
68 3300047472 Ga0495686_0005516 Ga0495686_0005516_7128_8981 550
69 3300048924 Ga0496121_0051211 Ga0496121_0051211_105_1961 550
70 3300049459 Ga0495678_004911 Ga0495678_004911_3460_5313 550
71 3300049572 Ga0501036_0100887 Ga0501036_0100887_183_1907 550
72 3300049581 Ga0501047_0117551 Ga0501047_0117551_113_1837 550
73 3300049822 Ga0501035_0054649 Ga0501035_0054649_137_1861 550
74 3300025915 Ga0207693_10042096 Ga0207693_100420961 551
75 3300053077 Ga0495601_0060524 Ga0495601_0060524_302_2170 551
76 3300053148 Ga0500590_011914 Ga0500590_011914_291_2159 551
77 3300013105 Ga0157369_10004099 Ga0157369_100040999 553
78 3300048918 Ga0496115_0010320 Ga0496115_0010320_1178_2878 553
79 3300046519 Ga0495632_0002831 Ga0495632_0002831_10440_12269 554
80 3300049579 Ga0501043_0070862 Ga0501043_0070862_549_2315 554
81 3300049581 Ga0501047_0094005 Ga0501047_0094005_114_1880 554
82 3300053086 Ga0500578_0024127 Ga0500578_0024127_1679_3559 554
83 3300048923 Ga0496120_0007791 Ga0496120_0007791_4511_6403 555
84 3300048924 Ga0496121_0000367 Ga0496121_0000367_75756_77477 555
85 3300049569 Ga0501032_0007753 Ga0501032_0007753_2755_4551 556
86 3300049570 Ga0501033_0018977 Ga0501033_0018977_717_2513 556
87 3300049571 Ga0501034_0065102 Ga0501034_0065102_1779_3575 556
88 3300049572 Ga0501036_0040565 Ga0501036_0040565_1766_3562 556
89 3300049574 Ga0501038_0004451 Ga0501038_0004451_10550_12346 556
90 3300049575 Ga0501039_0016195 Ga0501039_0016195_3507_5303 556
91 3300049579 Ga0501043_0033711 Ga0501043_0033711_1761_3557 556
92 3300049581 Ga0501047_0075320 Ga0501047_0075320_282_2078 556
93 3300049583 Ga0501067_0003336 Ga0501067_0003336_332_2128 556
94 3300049586 Ga0501070_0006331 Ga0501070_0006331_7735_9531 556
95 3300049589 Ga0501073_0024787 Ga0501073_0024787_1761_3557 556
96 3300049590 Ga0501074_0003265 Ga0501074_0003265_3750_5546 556
97 3300049742 Ga0501080_0001870 Ga0501080_0001870_9708_11504 556
98 3300049744 Ga0501083_0021871 Ga0501083_0021871_280_2076 556
99 3300046473 Ga0495582_0007053 Ga0495582_0007053_915_2651 557
100 3300046517 Ga0495630_0005144 Ga0495630_0005144_1263_2999 557
101 3300047319 Ga0495674_0085426 Ga0495674_0085426_807_2543 557
102 3300053177 Ga0500636_0000119 Ga0500636_0000119_23060_24877 557
103 3300046476 Ga0495662_0023461 Ga0495662_0023461_151_2019 558
104 3300047472 Ga0495686_0045269 Ga0495686_0045269_370_2178 558
105 3300053096 Ga0500641_0004471 Ga0500641_0004471_583_2391 558
106 3300005614 Ga0068856_100041885 Ga0068856_1000418853 559
107 3300031239 Ga0265328_10000375 Ga0265328_100003755 559
108 3300031250 Ga0265331_10001219 Ga0265331_100012192 559
109 3300031344 Ga0265316_10028316 Ga0265316_100283165 559
110 3300049571 Ga0501034_0110519 Ga0501034_0110519_357_2204 559
111 3300049822 Ga0501035_0155379 Ga0501035_0155379_141_1973 559
112 3300005338 Ga0068868_100036447 Ga0068868_1000364472 560
113 3300005548 Ga0070665_100008662 Ga0070665_1000086626 560
114 3300005842 Ga0068858_100016396 Ga0068858_1000163964 560
115 3300009098 Ga0105245_10029537 Ga0105245_100295373 560
116 3300009176 Ga0105242_10003188 Ga0105242_100031888 560
117 3300009177 Ga0105248_10064596 Ga0105248_100645963 560
118 3300013306 Ga0163162_10129246 Ga0163162_101292462 560
119 3300025284 Ga0209130_1001537 Ga0209130_100153711 560
120 3300025302 Ga0207426_1000092 Ga0207426_1000092186 560
121 3300048924 Ga0496121_0009377 Ga0496121_0009377_15_1856 560
122 3300005563 Ga0068855_100060114 Ga0068855_1000601142 561
123 3300005564 Ga0070664_100030302 Ga0070664_1000303023 561
124 3300025949 Ga0207667_10049561 Ga0207667_100495613 561
125 3300003187 JGI25151J46595_10000171 JGI25151J46595_1000017121 563
126 3300003215 JGI25153J46596_10019565 JGI25153J46596_100195652 563
127 3300025294 Ga0209025_1000215 Ga0209025_100021557 563
128 3300025297 Ga0209758_1007004 Ga0209758_10070046 563
129 3300049822 Ga0501035_0015904 Ga0501035_0015904_4279_5991 563
130 3300003775 Ga0055524_1008216 Ga0055524_10082162 564
131 3300031852 Ga0307410_10003097 Ga0307410_100030973 564
132 3300031995 Ga0307409_100106362 Ga0307409_1001063622 564
133 3300003693 Ga0032354_1041850 Ga0032354_10418502 565
134 3300028800 Ga0265338_10012061 Ga0265338_100120613 565
135 3300031731 Ga0307405_10007302 Ga0307405_100073023 565
136 3300046506 Ga0495583_0000010 Ga0495583_0000010_56729_58438 565
137 3300046507 Ga0495606_0002026 Ga0495606_0002026_1200_2909 565
138 3300046691 Ga0495670_0007608 Ga0495670_0007608_2956_4665 565
139 3300047472 Ga0495686_0000084 Ga0495686_0000084_146867_148576 565
140 3300048916 Ga0496113_0064106 Ga0496113_0064106_286_2157 565
141 3300048924 Ga0496121_0000017 Ga0496121_0000017_89955_91667 565
142 3300048928 Ga0496125_0062319 Ga0496125_0062319_508_2379 565
143 3300053103 Ga0500555_000032 Ga0500555_000032_71713_73422 565
144 iso_pu_bacteria 2876761206 2876769325 565
145 3300026121 Ga0207683_10071230 Ga0207683_100712304 566
146 3300031241 Ga0265325_10041526 Ga0265325_100415262 566
147 3300031250 Ga0265331_10024112 Ga0265331_100241122 566
148 3300031595 Ga0265313_10001910 Ga0265313_1000191022 566
149 3300031711 Ga0265314_10012877 Ga0265314_100128775 566
150 3300049570 Ga0501033_0023353 Ga0501033_0023353_2640_4361 566
151 3300049573 Ga0501037_0025511 Ga0501037_0025511_340_2061 566
152 3300049574 Ga0501038_0065703 Ga0501038_0065703_397_2190 566
153 3300049742 Ga0501080_0043786 Ga0501080_0043786_668_2461 566
154 3300049823 Ga0501044_0003373 Ga0501044_0003373_14387_16180 566
155 3300053087 Ga0500643_000021 Ga0500643_000021_118294_120015 566
156 3300037068 Ga0373925_0099995 Ga0373925_0099995_129_1916 567
157 3300046533 Ga0495640_0029139 Ga0495640_0029139_435_2324 567
158 3300046642 Ga0495634_0093837 Ga0495634_0093837_146_1933 567
159 3300053130 Ga0500642_0002048 Ga0500642_0002048_164_1957 567
160 3300003354 JGI25160J50197_1000001 JGI25160J50197_1000001250 568
161 3300003374 JGI25161J50226_1000001 JGI25161J50226_1000001514 568
162 3300004625 Ga0055543_1000089 Ga0055543_10000897 568
163 3300005262 Ga0065165_1000008 Ga0065165_1000008209 568
164 3300025284 Ga0209130_1000003 Ga0209130_1000003524 568
165 3300025302 Ga0207426_1000011 Ga0207426_1000011251 568
166 3300046507 Ga0495606_0010066 Ga0495606_0010066_374_2278 568
167 3300048927 Ga0496124_0014009 Ga0496124_0014009_188_1969 568
168 3300005983 Ga0081540_1025460 Ga0081540_10254602 569
169 3300021358 Ga0213873_10000010 Ga0213873_1000001075 569
170 3300021384 Ga0213876_10000027 Ga0213876_1000002775 569
171 3300026067 Ga0207678_10017373 Ga0207678_100173734 569
172 3300039437 Ga0436365_0662033 Ga0436365_0662033_48039_49781 569
173 3300039453 Ga0436362_0553655 Ga0436362_0553655_7158_8900 569
174 3300048929 Ga0496126_0138138 Ga0496126_0138138_206_1933 569
175 3300049572 Ga0501036_0035309 Ga0501036_0035309_510_2255 569
176 3300049744 Ga0501083_0001435 Ga0501083_0001435_9580_11325 569
177 3300049822 Ga0501035_0032955 Ga0501035_0032955_1261_3006 569
178 3300049823 Ga0501044_0005215 Ga0501044_0005215_10875_12620 569
179 3300060353 Ga0501082_0039308 Ga0501082_0039308_596_2341 569
180 3300027512 Ga0209179_1000461 Ga0209179_10004614 570
181 3300049571 Ga0501034_0102376 Ga0501034_0102376_1027_2793 570
182 3300002773 JGI25152J39213_1000656 JGI25152J39213_100065611 571
183 3300002774 JGI25150J39212_1000024 JGI25150J39212_100002491 571
184 3300003187 JGI25151J46595_10000027 JGI25151J46595_10000027157 571
185 3300003215 JGI25153J46596_10000314 JGI25153J46596_1000031417 571
186 3300025245 Ga0207425_1000043 Ga0207425_1000043154 571
187 3300025258 Ga0209129_1000072 Ga0209129_100007240 571
188 3300025294 Ga0209025_1000120 Ga0209025_100012040 571
189 3300025297 Ga0209758_1000111 Ga0209758_100011140 571
190 3300031911 Ga0307412_10001221 Ga0307412_100012215 571
191 3300048919 Ga0496116_0000536 Ga0496116_0000536_2937_4700 571
192 3300048919 Ga0496116_0001788 Ga0496116_0001788_14519_16393 571
193 3300048919 Ga0496116_0002009 Ga0496116_0002009_10828_12591 571
194 3300048919 Ga0496116_0023046 Ga0496116_0023046_1660_3513 571
195 3300048920 Ga0496117_0008389 Ga0496117_0008389_1134_3008 571
196 3300048921 Ga0496118_0046823 Ga0496118_0046823_1122_2996 571
197 3300048924 Ga0496121_0015387 Ga0496121_0015387_500_2263 571
198 3300048928 Ga0496125_0029142 Ga0496125_0029142_1984_3858 571
199 3300048929 Ga0496126_0021175 Ga0496126_0021175_4099_5973 571
200 3300053142 Ga0500577_0000018 Ga0500577_0000018_35851_37593 571
201 3300013104 Ga0157370_10017412 Ga0157370_100174121 572
202 3300014497 Ga0182008_10000730 Ga0182008_1000073011 572
203 3300017792 Ga0163161_10011078 Ga0163161_100110784 572
204 3300046460 Ga0495638_0001228 Ga0495638_0001228_11497_13272 572
205 3300048920 Ga0496117_0001801 Ga0496117_0001801_15867_17642 572
206 3300048921 Ga0496118_0002860 Ga0496118_0002860_12377_14152 572
207 3300048924 Ga0496121_0006278 Ga0496121_0006278_826_2601 572
208 3300048925 Ga0496122_0016730 Ga0496122_0016730_814_2589 572
209 3300048925 Ga0496122_0016983 Ga0496122_0016983_4475_6250 572
210 3300048926 Ga0496123_0009518 Ga0496123_0009518_2989_4764 572
211 3300048926 Ga0496123_0035561 Ga0496123_0035561_716_2491 572
212 3300048928 Ga0496125_0042692 Ga0496125_0042692_238_2013 572
213 3300053139 Ga0500568_0002063 Ga0500568_0002063_833_2698 572
214 3300017792 Ga0163161_10004635 Ga0163161_100046357 573
215 3300046453 Ga0495627_000853 Ga0495627_000853_9411_11186 573
216 3300048920 Ga0496117_0006267 Ga0496117_0006267_9372_11147 573
217 3300048921 Ga0496118_0006839 Ga0496118_0006839_9512_11287 573
218 3300053134 Ga0500658_0009601 Ga0500658_0009601_1637_3508 573
219 3300021441 Ga0213871_10002073 Ga0213871_100020733 574
220 3300039438 Ga0436360_0865099 Ga0436360_0865099_1321_3081 574
221 3300039453 Ga0436362_1110226 Ga0436362_1110226_4655_6415 574
222 3300048909 Ga0496106_0000244 Ga0496106_0000244_20217_22076 574
223 3300046535 Ga0495586_0023957 Ga0495586_0023957_821_2671 576
224 3300046512 Ga0495610_0001130 Ga0495610_0001130_4607_6379 577
225 3300046518 Ga0495631_0000369 Ga0495631_0000369_24584_26356 577
226 iso_pu_bacteria 2841911363 2841912036 577
227 iso_pu_bacteria 2841917233 2841922930 577
228 3300046810 Ga0495660_0004923 Ga0495660_0004923_775_2550 578
229 iso_pu_bacteria 2582581304 2585255335 581
230 iso_pu_bacteria 2585427594 2585847547 581
231 iso_pu_bacteria 2643221599 2644005592 581
232 iso_pu_bacteria 2917699015 2917700063 581
233 iso_pu_bacteria 2917699015 2917703135 581
234 3300053093 Ga0500651_0000826 Ga0500651_0000826_2474_4276 582
235 3300053125 Ga0500618_002834 Ga0500618_002834_3245_5101 582
236 3300053153 Ga0500616_0017608 Ga0500616_0017608_286_2082 582
237 iso_pu_bacteria 8024486573 8024489091 583
238 iso_pu_bacteria 2510917030 2511197297 584
239 iso_pu_bacteria 2582581298 2585224634 584
240 iso_pu_bacteria 2585427529 2585547190 584
241 iso_pu_bacteria 2615840698 2616557342 584
242 iso_pu_bacteria 2818991461 2819686758 584
243 iso_pu_bacteria 2919100787 2919104716 584
244 3300005436 Ga0070713_100069223 Ga0070713_1000692232 585
245 3300025915 Ga0207693_10037295 Ga0207693_100372951 585
246 iso_pu_bacteria 2582581315 2585324659 585
247 iso_pu_bacteria 2582581316 2585335008 585
248 iso_pu_bacteria 2842482326 2842485465 585
249 3300047318 Ga0495636_0000224 Ga0495636_0000224_17289_19082 586
250 3300002737 JGI25162J39368_1000739 JGI25162J39368_10007394 589
251 3300003214 JGI25165J46597_1001870 JGI25165J46597_10018706 589
252 3300025233 Ga0209437_100104 Ga0209437_1001045 589
253 3300025261 Ga0209233_1000054 Ga0209233_1000054131 589

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17991

Thioredoxin_10

Thioredoxin like C-terminal domain

475

620

0.98

PF00578

AhpC-TSA

AhpC/TSA family

307

426

0.92

PF08534

Redoxin

Redoxin

303

444

0.92

PF13905

Thioredoxin_8

Thioredoxin-like

328

423

0.86

PF02683

DsbD

Cytochrome C biogenesis protein transmembrane region

3

214

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3eyt-assembly1.cif.gz_B crystal structure of thioredoxin-like superfamily protein spoa0173 0.9221 272 412
2b5y-assembly1.cif.gz_A solution structure of a thioredoxin-like protein in the oxidized form 0.9104 272 414
1st9-assembly2.cif.gz_B crystal structure of a soluble domain of resa in the oxidised form 0.9023 273 411
7djk-assembly1.cif.gz_A structure of four truncated and mutated forms of quenching protein 0.8945 273 427
2h1a-assembly1.cif.gz_A resa c74a variant 0.8915 273 411
ID Description Score Start End Superfamily
af_Q8VZ10_367_538_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9596 273 413 3.40.30.10
af_Q9W5T4_48_199_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9589 282 413 3.40.30.10
2b5yA00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9104 272 414 3.40.30.10
af_O06392_67_205_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8821 289 413 3.40.30.10
1st9A00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8819 271 411 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A537U1I5-F1-model_v4 Redoxin domain-containing protein 0.9935 294 415 GO:0016209
GO:0016491
AF-A0A2T5XC57-F1-model_v4 deleted 0.9879 292 413
AF-W2TMM4-F1-model_v4 DipZ thioredoxin-like C-terminal domain-containing protein 0.9824 466 589
AF-A0A532DKK5-F1-model_v4 Redoxin domain-containing protein 0.9773 303 412 GO:0016209
GO:0016491
AF-A0A2V8IK74-F1-model_v4 DipZ thioredoxin-like C-terminal domain-containing protein 0.9756 504 589

Feature Viewer

pLDDT pTM Quality
72.83 0.59 Medium
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Predicted Structure (AlphaFold2)

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