F363980

General Info

Members Datasets Scaffolds Average Seq Length
253 106 506 455

Family's Representative Sequence

Representative Sequence 3300007076|Ga0075435_100007121|Ga0075435_1000071215
Length 494
Sequence MPCTQPTSGEITGAARQDCQAAVGEPEGLRYDRPPDLNALARADQRYLIHPLHHPVDNKDPIIYVRGRGVIVEDIDGREYIDGLSGLWNVNVGHGRAELAAAAAAQMTELAYCSGFVGSSNIPAITLAERLVELTDHAMDAVFLTSGGAEANESAFKTARFYWKARGRPDKVKIIARDQAYHGLTLQTMSATAMSPAYWKMFEPRVPGFVHVPTCYPYRCQGKKPGETAGQAAARQLEETILREDPDTIAAFVAEPIHGAGGVFYPTDDYWPLVREICTRHDVLLIDDEIITGFGRTGRWFGLSHWNVTADIVSFAKGVTSGYLPLGGVMVTGAIKEVMDSVSADDRWMHAYTNSGHPTCCAVALKNIDIIERERLVERATEMGRRLKVGLDAAFGALPHVGDIRGGKGLLAAVEFVQDRATKRAFRPELKFAARLKAEMMQRGVITRTRAAAGADPAPGDILFFAPPLIVTEAEIDRLVRVARDASDAVVAEC

Samples

Sample ID Description Type Environment
1 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
21 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
41 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
42 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
55 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
56 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
57 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
60 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
61 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
62 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
64 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
65 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
66 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
67 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
68 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
69 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
70 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
82 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
83 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
84 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
85 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
86 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
87 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
88 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
89 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
90 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
91 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
92 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
93 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
95 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
96 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
97 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
98 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
99 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
100 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
101 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
102 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
103 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
104 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
105 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
106 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.6
Metatranscriptomes 0.4
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.4
Rhizosphere 98.81
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075435_100007121 3300007076 Bacteria 7944
2 JGI25406J46586_10003476 3300003203 Bacteria 7403
3 Ga0058862_12827311 3300004803 Bacteria 1710
4 Ga0070683_100004318 3300005329 Bacteria 11685
5 Ga0070680_100057186 3300005336 Bacteria 3188
6 Ga0070669_100140026 3300005353 Bacteria 1864
7 Ga0070674_100010978 3300005356 Bacteria 5495
8 Ga0070694_100004664 3300005444 Bacteria 8246
9 Ga0070708_100049028 3300005445 Bacteria 3735
10 Ga0070708_100053236 3300005445 Bacteria 3591
11 Ga0070708_100055455 3300005445 Bacteria 3525
12 Ga0070706_100009612 3300005467 Bacteria 8993
13 Ga0070706_100109018 3300005467 Bacteria 2576
14 Ga0070707_100002181 3300005468 Bacteria 18718
15 Ga0070707_100015873 3300005468 Bacteria 7069
16 Ga0070707_100041684 3300005468 Bacteria 4395
17 Ga0070707_100112901 3300005468 Bacteria 2636
18 Ga0070707_100172032 3300005468 Bacteria 2111
19 Ga0070699_100019675 3300005518 Bacteria 5817
20 Ga0070684_100120320 3300005535 Bacteria 2362
21 Ga0070697_100028103 3300005536 Bacteria 4502
22 Ga0070697_100042642 3300005536 Bacteria 3672
23 Ga0070697_100049070 3300005536 Bacteria 3425
24 Ga0070697_100069303 3300005536 Bacteria 2888
25 Ga0070695_100034307 3300005545 Bacteria 3180
26 Ga0070696_100172273 3300005546 Bacteria 1601
27 Ga0070665_100045569 3300005548 Bacteria 4404
28 Ga0068863_100027927 3300005841 Bacteria 5386
29 Ga0081539_10000009 3300005985 Bacteria 509286
30 Ga0070712_100001466 3300006175 Bacteria 14382
31 Ga0097621_100023573 3300006237 Bacteria 4793
32 Ga0068871_100105868 3300006358 Bacteria 2361
33 Ga0068871_100169979 3300006358 Bacteria 1868
34 Ga0075428_100000487 3300006844 Bacteria 40054
35 Ga0075428_100019949 3300006844 Bacteria 7422
36 Ga0075430_100004663 3300006846 Bacteria 11523
37 Ga0075430_100055025 3300006846 Bacteria 3347
38 Ga0075431_100000545 3300006847 Bacteria 31644
39 Ga0075431_100007802 3300006847 Bacteria 10659
40 Ga0075431_100022257 3300006847 Bacteria 6480
41 Ga0075431_100055662 3300006847 Bacteria 4080
42 Ga0075431_100222356 3300006847 Bacteria 1926
43 Ga0075433_10000090 3300006852 Bacteria 42150
44 Ga0075433_10238953 3300006852 Bacteria 1613
45 Ga0075434_100037183 3300006871 Bacteria 4819
46 Ga0075434_100043845 3300006871 Bacteria 4437
47 Ga0075434_100087145 3300006871 Bacteria 3123
48 Ga0075429_100000819 3300006880 Bacteria 24379
49 Ga0075429_100017932 3300006880 Bacteria 6121
50 Ga0075429_100024110 3300006880 Bacteria 5276
51 Ga0068865_100003899 3300006881 Bacteria 8949
52 Ga0075436_100000168 3300006914 Bacteria 41115
53 Ga0075436_100038057 3300006914 Bacteria 3321
54 Ga0075436_100056289 3300006914 Bacteria 2716
55 Ga0075435_100002818 3300007076 Bacteria 11628
56 Ga0075435_100006829 3300007076 Bacteria 8099
57 Ga0075435_100011264 3300007076 Bacteria 6567
58 Ga0075435_100027071 3300007076 Bacteria 4481
59 Ga0075435_100029905 3300007076 Bacteria 4279
60 Ga0099794_10015671 3300007265 Bacteria 3351
61 Ga0111539_10105861 3300009094 Bacteria 3300
62 Ga0105245_10108817 3300009098 Bacteria 2574
63 Ga0114129_10002261 3300009147 Bacteria 26629
64 Ga0114129_10002331 3300009147 Bacteria 26353
65 Ga0114129_10002871 3300009147 Bacteria 24116
66 Ga0114129_10012023 3300009147 Bacteria 12313
67 Ga0114129_10027657 3300009147 Bacteria 8030
68 Ga0114129_10035906 3300009147 Bacteria 6999
69 Ga0114129_10069190 3300009147 Bacteria 4920
70 Ga0105243_10001689 3300009148 Bacteria 19021
71 Ga0105243_10053316 3300009148 Bacteria 3208
72 Ga0105242_10002974 3300009176 Bacteria 13265
73 Ga0105242_10014363 3300009176 Bacteria 6135
74 Ga0105248_10373995 3300009177 Bacteria 1604
75 Ga0105249_10110492 3300009553 Bacteria 2598
76 Ga0105249_10158903 3300009553 Bacteria 2183
77 Ga0157378_10104433 3300013297 Bacteria 2590
78 Ga0157376_10022301 3300014969 Bacteria 4933
79 Ga0157376_10025491 3300014969 Bacteria 4658
80 Ga0157376_10085210 3300014969 Bacteria 2722
81 Ga0163161_10108510 3300017792 Bacteria 2073
82 Ga0207653_10018085 3300025885 Bacteria 2220
83 Ga0207684_10001241 3300025910 Bacteria 28340
84 Ga0207684_10020591 3300025910 Bacteria 5636
85 Ga0207693_10003375 3300025915 Bacteria 13638
86 Ga0207693_10167413 3300025915 Bacteria 1730
87 Ga0207646_10001834 3300025922 Bacteria 25670
88 Ga0207646_10017132 3300025922 Bacteria 6787
89 Ga0207646_10117920 3300025922 Bacteria 2384
90 Ga0207681_10129161 3300025923 Bacteria 1866
91 Ga0207687_10135209 3300025927 Bacteria 1864
92 Ga0207706_10023456 3300025933 Bacteria 5540
93 Ga0207706_10069102 3300025933 Bacteria 3106
94 Ga0207670_10163673 3300025936 Bacteria 1663
95 Ga0207691_10106249 3300025940 Bacteria 2500
96 Ga0207661_10002916 3300025944 Bacteria 11821
97 Ga0207712_10114964 3300025961 Bacteria 2025
98 Ga0209588_1009868 3300027671 Bacteria 2862
99 Ga0307513_10095735 3300031456 Bacteria 3009
100 Ga0307408_100016292 3300031548 Bacteria 4959
101 Ga0265313_10000223 3300031595 Bacteria 61143
102 Ga0307409_100070047 3300031995 Bacteria 2782
103 Ga0307416_100196900 3300032002 Bacteria 1907
104 Ga0316574_0002865 3300035398 Bacteria 8759
105 Ga0373947_0047895 3300035725 Bacteria 2563
106 Ga0373937_0025614 3300036401 Bacteria 5327
107 Ga0373925_0007748 3300037068 Bacteria 7817
108 Ga0395905_0026047 3300037471 Bacteria 5515
109 Ga0400487_02113 3300039110 Bacteria 2659
110 Ga0453683_0093850 3300044673 Bacteria 1882
111 Ga0451576_0011794 3300045051 Bacteria 9897
112 Ga0451576_0058335 3300045051 Bacteria 4034
113 Ga0495658_0056588 3300046683 Bacteria 2237
114 Ga0495669_0019131 3300046684 Bacteria 2954
115 Ga0495669_0037883 3300046684 Bacteria 2135
116 Ga0496114_0264848 3300048917 Bacteria 1514
117 Ga0501031_0039247 3300049568 Bacteria 3089
118 Ga0501033_0006878 3300049570 Bacteria 8879
119 Ga0501033_0080068 3300049570 Bacteria 2397
120 Ga0501036_0033791 3300049572 Bacteria 4325
121 Ga0501038_0030609 3300049574 Bacteria 4760
122 Ga0501038_0064704 3300049574 Bacteria 3118
123 Ga0501039_0001823 3300049575 Bacteria 15759
124 Ga0501039_0016665 3300049575 Bacteria 5629
125 Ga0501039_0064059 3300049575 Bacteria 2849
126 Ga0501040_0002532 3300049576 Bacteria 11779
127 Ga0501040_0015242 3300049576 Bacteria 5079
128 Ga0501041_0007736 3300049577 Bacteria 6309
129 Ga0501042_0003437 3300049578 Bacteria 9950
130 Ga0501042_0019659 3300049578 Bacteria 4694
131 Ga0501042_0099495 3300049578 Bacteria 2091
132 Ga0501043_0024885 3300049579 Bacteria 4697
133 Ga0501046_0002984 3300049580 Bacteria 15639
134 Ga0501046_0014039 3300049580 Bacteria 6765
135 Ga0501046_0077660 3300049580 Bacteria 2570
136 Ga0501048_0002940 3300049582 Bacteria 13025
137 Ga0501048_0088747 3300049582 Bacteria 2181
138 Ga0501048_0176935 3300049582 Bacteria 1512
139 Ga0501067_0010461 3300049583 Bacteria 5135
140 Ga0501067_0107639 3300049583 Bacteria 1550
141 Ga0501070_0066673 3300049586 Bacteria 2981
142 Ga0501071_0003923 3300049587 Bacteria 9378
143 Ga0501071_0033854 3300049587 Bacteria 3632
144 Ga0501071_0050716 3300049587 Bacteria 2990
145 Ga0501071_0062306 3300049587 Bacteria 2702
146 Ga0501072_0007964 3300049588 Bacteria 8041
147 Ga0501072_0008115 3300049588 Bacteria 7967
148 Ga0501072_0017566 3300049588 Bacteria 5500
149 Ga0501072_0020067 3300049588 Bacteria 5174
150 Ga0501072_0030960 3300049588 Bacteria 4186
151 Ga0501072_0103449 3300049588 Bacteria 2263
152 Ga0501072_0156217 3300049588 Bacteria 1819
153 Ga0501072_0197198 3300049588 Bacteria 1605
154 Ga0501072_0216667 3300049588 Bacteria 1526
155 Ga0501072_0224674 3300049588 Bacteria 1496
156 Ga0501074_0028640 3300049590 Bacteria 4037
157 Ga0501074_0113035 3300049590 Bacteria 1943
158 Ga0501074_0165621 3300049590 Bacteria 1578
159 Ga0501075_0001772 3300049591 Bacteria 14197
160 Ga0501075_0010462 3300049591 Bacteria 6517
161 Ga0501075_0023488 3300049591 Bacteria 4515
162 Ga0501075_0036425 3300049591 Bacteria 3672
163 Ga0501075_0174219 3300049591 Bacteria 1642
164 Ga0501076_0003373 3300049592 Bacteria 11210
165 Ga0501076_0011818 3300049592 Bacteria 6520
166 Ga0501076_0014931 3300049592 Bacteria 5861
167 Ga0501076_0032259 3300049592 Bacteria 4087
168 Ga0501076_0033017 3300049592 Bacteria 4040
169 Ga0501076_0039281 3300049592 Bacteria 3716
170 Ga0501076_0250770 3300049592 Bacteria 1448
171 Ga0501077_0000213 3300049593 Bacteria 33845
172 Ga0501077_0011076 3300049593 Bacteria 5624
173 Ga0501077_0034892 3300049593 Bacteria 3202
174 Ga0501077_0045581 3300049593 Bacteria 2786
175 Ga0501077_0075667 3300049593 Bacteria 2132
176 Ga0501077_0096669 3300049593 Bacteria 1872
177 Ga0501077_0102196 3300049593 Bacteria 1816
178 Ga0501079_0029635 3300049741 Bacteria 4203
179 Ga0501079_0064249 3300049741 Bacteria 2831
180 Ga0501079_0069985 3300049741 Bacteria 2709
181 Ga0501079_0079570 3300049741 Bacteria 2534
182 Ga0501079_0081146 3300049741 Bacteria 2507
183 Ga0501080_0076768 3300049742 Bacteria 3107
184 Ga0501080_0102747 3300049742 Bacteria 2651
185 Ga0501081_0000190 3300049743 Bacteria 29695
186 Ga0501081_0013038 3300049743 Bacteria 5469
187 Ga0501081_0021808 3300049743 Bacteria 4278
188 Ga0501081_0038624 3300049743 Bacteria 3262
189 Ga0501081_0040475 3300049743 Bacteria 3191
190 Ga0501083_0024629 3300049744 Bacteria 4168
191 Ga0501035_0201535 3300049822 Bacteria 1706
192 Ga0501045_0010129 3300049824 Bacteria 6597
193 Ga0501045_0018790 3300049824 Bacteria 4920
194 Ga0501045_0058800 3300049824 Bacteria 2815
195 Ga0501045_0069698 3300049824 Bacteria 2585
196 Ga0501045_0146301 3300049824 Bacteria 1758
197 nmdc:mga05p37_11193_c1 3300050507 Bacteria 10664
198 nmdc:mga05p37_1204_c1 3300050507 Bacteria 29952
199 nmdc:mga05p37_13707_c1 3300050507 Bacteria 9717
200 nmdc:mga05p37_15266_c1 3300050507 Bacteria 9226
201 nmdc:mga05p37_2227_c1 3300050507 Bacteria 21082
202 nmdc:mga05p37_33781_c1 3300050507 Bacteria 6265
203 nmdc:mga05p37_418369_c1 3300050507 Bacteria 1560
204 nmdc:mga05p37_534089_c1 3300050507 Bacteria 1339
205 nmdc:mga05p37_5432_c1 3300050507 Bacteria 14974
206 nmdc:mga05p37_6179_c1 3300050507 Bacteria 14100
207 nmdc:mga05p37_8569_c1 3300050507 Bacteria 8608
208 nmdc:mga09592_148232_c1 3300050508 Bacteria 2024
209 nmdc:mga09592_15474_c1 3300050508 Bacteria 6234
210 nmdc:mga09592_4655_c1 3300050508 Bacteria 11109
211 nmdc:mga0qj67_16505_c1 3300050509 Bacteria 5603
212 nmdc:mga0qj67_32896_c1 3300050509 Bacteria 4044
213 nmdc:mga0qj67_53917_c1 3300050509 Bacteria 3184
214 nmdc:mga06r32_10756_c1 3300050510 Bacteria 8240
215 nmdc:mga06r32_192109_c1 3300050510 Bacteria 2029
216 nmdc:mga06r32_2401_c1 3300050510 Bacteria 16760
217 nmdc:mga06r32_252921_c1 3300050510 Bacteria 1750
218 nmdc:mga06r32_25664_c1 3300050510 Bacteria 5485
219 nmdc:mga06r32_67133_c1 3300050510 Bacteria 3462
220 nmdc:mga08y16_356096_c1 3300050511 Bacteria 1503
221 nmdc:mga0n895_1038_c1 3300050512 Bacteria 20206
222 nmdc:mga0n895_20660_c1 3300050512 Bacteria 6146
223 nmdc:mga0n895_47875_c1 3300050512 Bacteria 4182
224 nmdc:mga0rr50_117437_c1 3300050513 Bacteria 2113
225 nmdc:mga0rr50_16486_c1 3300050513 Bacteria 4910
226 nmdc:mga0rr50_29193_c1 3300050513 Bacteria 3886
227 nmdc:mga0rr50_985_c1 3300050513 Bacteria 15480
228 nmdc:mga08x19_102260_c1 3300050514 Bacteria 1903
229 nmdc:mga08x19_9497_c1 3300050514 Bacteria 5825
230 nmdc:mga0a205_145835_c1 3300050515 Bacteria 2267
231 nmdc:mga0a205_164665_c2 3300050515 Bacteria 1613
232 nmdc:mga0a205_228198_c1 3300050515 Bacteria 1746
233 nmdc:mga0a205_253428_c1 3300050515 Bacteria 1639
234 nmdc:mga0a205_48137_c1 3300050515 Bacteria 4115
235 Ga0501084_0009812 3300054114 Bacteria 7915
236 Ga0501084_0011345 3300054114 Bacteria 7378
237 Ga0501084_0057036 3300054114 Bacteria 3268
238 Ga0501084_0070907 3300054114 Bacteria 2917
239 Ga0501084_0128638 3300054114 Bacteria 2132
240 Ga0501084_0131404 3300054114 Bacteria 2107
241 Ga0501084_0141863 3300054114 Bacteria 2023
242 Ga0501084_0161002 3300054114 Bacteria 1893
243 Ga0501084_0186408 3300054114 Bacteria 1751
244 Ga0501084_0202523 3300054114 Bacteria 1675
245 Ga0501082_0005029 3300060353 Bacteria 11537
246 Ga0501082_0013295 3300060353 Bacteria 7078
247 Ga0501082_0013357 3300060353 Bacteria 7062
248 Ga0501082_0121479 3300060353 Bacteria 2264
249 Ga0530510_0000207 3300061734 Bacteria 36298
250 Ga0530510_0013603 3300061734 Bacteria 5723
251 Ga0530510_0035870 3300061734 Bacteria 3575
252 Ga0530510_0053208 3300061734 Bacteria 2926
253 Ga0530510_0055878 3300061734 Bacteria 2852
254 Ga0075435_100007121
255 JGI25406J46586_10003476
256 Ga0058862_12827311
257 Ga0070683_100004318
258 Ga0070680_100057186
259 Ga0070669_100140026
260 Ga0070674_100010978
261 Ga0070694_100004664
262 Ga0070708_100049028
263 Ga0070708_100053236
264 Ga0070708_100055455
265 Ga0070706_100009612
266 Ga0070706_100109018
267 Ga0070707_100002181
268 Ga0070707_100015873
269 Ga0070707_100041684
270 Ga0070707_100112901
271 Ga0070707_100172032
272 Ga0070699_100019675
273 Ga0070684_100120320
274 Ga0070697_100028103
275 Ga0070697_100042642
276 Ga0070697_100049070
277 Ga0070697_100069303
278 Ga0070695_100034307
279 Ga0070696_100172273
280 Ga0070665_100045569
281 Ga0068863_100027927
282 Ga0081539_10000009
283 Ga0070712_100001466
284 Ga0097621_100023573
285 Ga0068871_100105868
286 Ga0068871_100169979
287 Ga0075428_100000487
288 Ga0075428_100019949
289 Ga0075430_100004663
290 Ga0075430_100055025
291 Ga0075431_100000545
292 Ga0075431_100007802
293 Ga0075431_100022257
294 Ga0075431_100055662
295 Ga0075431_100222356
296 Ga0075433_10000090
297 Ga0075433_10238953
298 Ga0075434_100037183
299 Ga0075434_100043845
300 Ga0075434_100087145
301 Ga0075429_100000819
302 Ga0075429_100017932
303 Ga0075429_100024110
304 Ga0068865_100003899
305 Ga0075436_100000168
306 Ga0075436_100038057
307 Ga0075436_100056289
308 Ga0075435_100002818
309 Ga0075435_100006829
310 Ga0075435_100011264
311 Ga0075435_100027071
312 Ga0075435_100029905
313 Ga0099794_10015671
314 Ga0111539_10105861
315 Ga0105245_10108817
316 Ga0114129_10002261
317 Ga0114129_10002331
318 Ga0114129_10002871
319 Ga0114129_10012023
320 Ga0114129_10027657
321 Ga0114129_10035906
322 Ga0114129_10069190
323 Ga0105243_10001689
324 Ga0105243_10053316
325 Ga0105242_10002974
326 Ga0105242_10014363
327 Ga0105248_10373995
328 Ga0105249_10110492
329 Ga0105249_10158903
330 Ga0157378_10104433
331 Ga0157376_10022301
332 Ga0157376_10025491
333 Ga0157376_10085210
334 Ga0163161_10108510
335 Ga0207653_10018085
336 Ga0207684_10001241
337 Ga0207684_10020591
338 Ga0207693_10003375
339 Ga0207693_10167413
340 Ga0207646_10001834
341 Ga0207646_10017132
342 Ga0207646_10117920
343 Ga0207681_10129161
344 Ga0207687_10135209
345 Ga0207706_10023456
346 Ga0207706_10069102
347 Ga0207670_10163673
348 Ga0207691_10106249
349 Ga0207661_10002916
350 Ga0207712_10114964
351 Ga0209588_1009868
352 Ga0307513_10095735
353 Ga0307408_100016292
354 Ga0265313_10000223
355 Ga0307409_100070047
356 Ga0307416_100196900
357 Ga0316574_0002865
358 Ga0373947_0047895
359 Ga0373937_0025614
360 Ga0373925_0007748
361 Ga0395905_0026047
362 Ga0400487_02113
363 Ga0453683_0093850
364 Ga0451576_0011794
365 Ga0451576_0058335
366 Ga0495658_0056588
367 Ga0495669_0019131
368 Ga0495669_0037883
369 Ga0496114_0264848
370 Ga0501031_0039247
371 Ga0501033_0006878
372 Ga0501033_0080068
373 Ga0501036_0033791
374 Ga0501038_0030609
375 Ga0501038_0064704
376 Ga0501039_0001823
377 Ga0501039_0016665
378 Ga0501039_0064059
379 Ga0501040_0002532
380 Ga0501040_0015242
381 Ga0501041_0007736
382 Ga0501042_0003437
383 Ga0501042_0019659
384 Ga0501042_0099495
385 Ga0501043_0024885
386 Ga0501046_0002984
387 Ga0501046_0014039
388 Ga0501046_0077660
389 Ga0501048_0002940
390 Ga0501048_0088747
391 Ga0501048_0176935
392 Ga0501067_0010461
393 Ga0501067_0107639
394 Ga0501070_0066673
395 Ga0501071_0003923
396 Ga0501071_0033854
397 Ga0501071_0050716
398 Ga0501071_0062306
399 Ga0501072_0007964
400 Ga0501072_0008115
401 Ga0501072_0017566
402 Ga0501072_0020067
403 Ga0501072_0030960
404 Ga0501072_0103449
405 Ga0501072_0156217
406 Ga0501072_0197198
407 Ga0501072_0216667
408 Ga0501072_0224674
409 Ga0501074_0028640
410 Ga0501074_0113035
411 Ga0501074_0165621
412 Ga0501075_0001772
413 Ga0501075_0010462
414 Ga0501075_0023488
415 Ga0501075_0036425
416 Ga0501075_0174219
417 Ga0501076_0003373
418 Ga0501076_0011818
419 Ga0501076_0014931
420 Ga0501076_0032259
421 Ga0501076_0033017
422 Ga0501076_0039281
423 Ga0501076_0250770
424 Ga0501077_0000213
425 Ga0501077_0011076
426 Ga0501077_0034892
427 Ga0501077_0045581
428 Ga0501077_0075667
429 Ga0501077_0096669
430 Ga0501077_0102196
431 Ga0501079_0029635
432 Ga0501079_0064249
433 Ga0501079_0069985
434 Ga0501079_0079570
435 Ga0501079_0081146
436 Ga0501080_0076768
437 Ga0501080_0102747
438 Ga0501081_0000190
439 Ga0501081_0013038
440 Ga0501081_0021808
441 Ga0501081_0038624
442 Ga0501081_0040475
443 Ga0501083_0024629
444 Ga0501035_0201535
445 Ga0501045_0010129
446 Ga0501045_0018790
447 Ga0501045_0058800
448 Ga0501045_0069698
449 Ga0501045_0146301
450 nmdc:mga05p37_11193_c1
451 nmdc:mga05p37_1204_c1
452 nmdc:mga05p37_13707_c1
453 nmdc:mga05p37_15266_c1
454 nmdc:mga05p37_2227_c1
455 nmdc:mga05p37_33781_c1
456 nmdc:mga05p37_418369_c1
457 nmdc:mga05p37_534089_c1
458 nmdc:mga05p37_5432_c1
459 nmdc:mga05p37_6179_c1
460 nmdc:mga05p37_8569_c1
461 nmdc:mga09592_148232_c1
462 nmdc:mga09592_15474_c1
463 nmdc:mga09592_4655_c1
464 nmdc:mga0qj67_16505_c1
465 nmdc:mga0qj67_32896_c1
466 nmdc:mga0qj67_53917_c1
467 nmdc:mga06r32_10756_c1
468 nmdc:mga06r32_192109_c1
469 nmdc:mga06r32_2401_c1
470 nmdc:mga06r32_252921_c1
471 nmdc:mga06r32_25664_c1
472 nmdc:mga06r32_67133_c1
473 nmdc:mga08y16_356096_c1
474 nmdc:mga0n895_1038_c1
475 nmdc:mga0n895_20660_c1
476 nmdc:mga0n895_47875_c1
477 nmdc:mga0rr50_117437_c1
478 nmdc:mga0rr50_16486_c1
479 nmdc:mga0rr50_29193_c1
480 nmdc:mga0rr50_985_c1
481 nmdc:mga08x19_102260_c1
482 nmdc:mga08x19_9497_c1
483 nmdc:mga0a205_145835_c1
484 nmdc:mga0a205_164665_c2
485 nmdc:mga0a205_228198_c1
486 nmdc:mga0a205_253428_c1
487 nmdc:mga0a205_48137_c1
488 Ga0501084_0009812
489 Ga0501084_0011345
490 Ga0501084_0057036
491 Ga0501084_0070907
492 Ga0501084_0128638
493 Ga0501084_0131404
494 Ga0501084_0141863
495 Ga0501084_0161002
496 Ga0501084_0186408
497 Ga0501084_0202523
498 Ga0501082_0005029
499 Ga0501082_0013295
500 Ga0501082_0013357
501 Ga0501082_0121479
502 Ga0530510_0000207
503 Ga0530510_0013603
504 Ga0530510_0035870
505 Ga0530510_0053208
506 Ga0530510_0055878

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00202

Aminotran_3

Aminotransferase class-III

54

486

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5kr4-assembly1.cif.gz_B directed evolution of transaminases by ancestral reconstruction. using old proteins for new chemistries 0.9481 4 459
5ghf-assembly1.cif.gz_B transaminase with l-ala 0.9461 30 459
6io1-assembly1.cif.gz_B crystal structure of a novel thermostable (s)-enantioselective omega-transaminase from thermomicrobium roseum 0.9458 1 458
6fyq-assembly1.cif.gz_A-2 the crystal structure of a new transaminase from the marine bacterium virgibacillus 0.9439 8 459
5kr6-assembly1.cif.gz_A directed evolution of transaminases by ancestral reconstruction. using old proteins for new chemistries 0.9435 6 459
ID Description Score Start End Superfamily
3gjuA01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9511 342 458 3.90.1150.10
6io1A02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9462 64 340 3.40.640.10
6fyqA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9454 64 340 3.40.640.10
af_O53379_75_342_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9423 64 333 3.40.640.10
af_Q94CE5_383_495_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9418 340 457 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A6B3I9R0-F1-model_v4 Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme 0.9745 212 331 GO:0005829
GO:0008483
GO:0030170
AF-A0A2V6U3K9-F1-model_v4 Aspartate aminotransferase family protein 0.9737 1 292 GO:0008483
GO:0030170
AF-A0A2V6U3K9-F1-model_v4 Aspartate aminotransferase family protein 0.9704 1 292 GO:0008483
GO:0030170
AF-A0A0N0I896-F1-model_v4 deleted 0.9668 213 321
AF-A0A3D3EDK3-F1-model_v4 Aspartate aminotransferase family protein 0.9613 204 390 GO:0008483
GO:0030170

Map