F363856

General Info

Members Datasets Scaffolds Average Seq Length
253 191 506 161

Family's Representative Sequence

Representative Sequence 3300005440|Ga0070705_100054514|Ga0070705_1000545142
Length 179
Sequence MRIAGRFAGHNIGVTAPNVHPREGGCDCRHVRYRLESRPLFVHCCHCRWCQRETGTAFALNAMIESDRVTLLGAEPELVDTPSESGKGQKIARCPRCRIAVWSHYAGAGPAVRFVRVGTLDDPDQLPPDIHIYTASKQPWVVLPPGTPAVPAYYDRKQYWPAESLARRDALLATPKPAR

Samples

Sample ID Description Type Environment
1 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
71 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
105 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
106 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
107 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
108 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
109 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
112 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
113 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
114 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
115 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
116 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
117 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
118 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
119 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
120 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
121 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
122 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
123 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
124 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
125 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
126 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
127 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
128 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
129 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
130 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
131 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
132 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
133 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
134 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
135 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
136 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
137 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
138 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
139 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
140 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
141 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
142 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
146 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
152 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
159 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
160 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
163 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
164 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
172 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
173 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
174 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
175 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
176 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
177 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
178 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
179 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
180 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
181 2791355199
182 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
183 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
184 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
185 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
186 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
187 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
188 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
189 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
190 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
191 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.84
Metatranscriptomes 0
Isolates 5.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.98
Nodule 4.74
Rhizoplane 5.14
Rhizosphere 86.17
Stem 0
Stem Tuber 0
Unclassified 5.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070705_100054514 3300005440 Bacteria 2345
2 JGI25404J52841_10034367 3300003659 Bacteria 1080
3 JGI25405J52794_10049044 3300003911 Bacteria 903
4 Ga0070670_100026319 3300005331 Bacteria 5007
5 Ga0070666_10307460 3300005335 Bacteria 1130
6 Ga0070680_100060753 3300005336 Bacteria 3093
7 Ga0070682_100164462 3300005337 Bacteria 1536
8 Ga0070689_100224541 3300005340 Bacteria 1542
9 Ga0070661_100122129 3300005344 Bacteria 1952
10 Ga0070671_100002306 3300005355 Bacteria 14729
11 Ga0070674_100023035 3300005356 Bacteria 4024
12 Ga0070673_100089116 3300005364 Bacteria 2518
13 Ga0070673_100860999 3300005364 Bacteria 839
14 Ga0070688_100137271 3300005365 Bacteria 1657
15 Ga0070709_10087321 3300005434 Bacteria 2049
16 Ga0070714_100286705 3300005435 Bacteria 1531
17 Ga0070714_101611328 3300005435 Bacteria 634
18 Ga0070713_100219972 3300005436 Bacteria 1722
19 Ga0070711_100222456 3300005439 Bacteria 1468
20 Ga0070694_100004171 3300005444 Bacteria 8682
21 Ga0070678_100050789 3300005456 Bacteria 3002
22 Ga0070681_10303633 3300005458 Bacteria 1505
23 Ga0070681_10720754 3300005458 Bacteria 913
24 Ga0070679_100093330 3300005530 Bacteria 2997
25 Ga0070684_100898548 3300005535 Bacteria 830
26 Ga0068853_101215035 3300005539 Bacteria 728
27 Ga0070672_100283750 3300005543 Bacteria 1401
28 Ga0070672_100640210 3300005543 Bacteria 928
29 Ga0070695_100096481 3300005545 Bacteria 1984
30 Ga0070693_100057543 3300005547 Bacteria 2248
31 Ga0070665_100114342 3300005548 Bacteria 2701
32 Ga0070665_100264313 3300005548 Bacteria 1722
33 Ga0070704_100124326 3300005549 Bacteria 1987
34 Ga0068855_101219620 3300005563 Bacteria 782
35 Ga0068854_100136887 3300005578 Bacteria 1876
36 Ga0068854_101121627 3300005578 Bacteria 702
37 Ga0068859_100496031 3300005617 Bacteria 1316
38 Ga0068864_100573218 3300005618 Bacteria 1093
39 Ga0068858_100315981 3300005842 Bacteria 1492
40 Ga0081455_10001255 3300005937 Bacteria 31699
41 Ga0081455_10091968 3300005937 Bacteria 2456
42 Ga0081540_1005577 3300005983 Bacteria 9373
43 Ga0081540_1017540 3300005983 Bacteria 4428
44 Ga0081539_10096704 3300005985 Bacteria 1513
45 Ga0070717_10461450 3300006028 Bacteria 1146
46 Ga0070712_100589353 3300006175 Bacteria 940
47 Ga0075367_10202387 3300006178 Bacteria 1240
48 Ga0075366_10290602 3300006195 Bacteria 999
49 Ga0097621_100303332 3300006237 Bacteria 1411
50 Ga0075428_100028369 3300006844 Bacteria 6191
51 Ga0075428_100098062 3300006844 Bacteria 3195
52 Ga0075428_100117867 3300006844 Bacteria 2892
53 Ga0075428_100159847 3300006844 Bacteria 2446
54 Ga0075428_100249648 3300006844 Bacteria 1913
55 Ga0075428_100627885 3300006844 Bacteria 1147
56 Ga0075430_100033434 3300006846 Bacteria 4364
57 Ga0075430_100035133 3300006846 Bacteria 4254
58 Ga0075430_100053034 3300006846 Bacteria 3415
59 Ga0075431_100150320 3300006847 Bacteria 2398
60 Ga0075431_100493376 3300006847 Bacteria 1216
61 Ga0075434_100276063 3300006871 Bacteria 1700
62 Ga0075429_100011523 3300006880 Bacteria 7667
63 Ga0075429_100091763 3300006880 Bacteria 2649
64 Ga0075429_100123836 3300006880 Bacteria 2260
65 Ga0075436_100851997 3300006914 Bacteria 680
66 Ga0097620_100495983 3300006931 Bacteria 1316
67 Ga0075435_100044872 3300007076 Bacteria 3542
68 Ga0105240_10387423 3300009093 Bacteria 1577
69 Ga0105245_10094881 3300009098 Bacteria 2751
70 Ga0114129_10319233 3300009147 Bacteria 2065
71 Ga0114129_10610426 3300009147 Bacteria 1412
72 Ga0114129_10846624 3300009147 Bacteria 1163
73 Ga0114129_11142972 3300009147 Bacteria 973
74 Ga0105243_10630062 3300009148 Bacteria 1036
75 Ga0105241_10092385 3300009174 Bacteria 2389
76 Ga0105242_10822718 3300009176 Bacteria 921
77 Ga0105248_10240315 3300009177 Bacteria 2039
78 Ga0105237_11688887 3300009545 Bacteria 640
79 Ga0105238_10114056 3300009551 Bacteria 2682
80 Ga0105249_11119419 3300009553 Bacteria 858
81 Ga0105239_10119718 3300010375 Bacteria 2922
82 Ga0105239_10703216 3300010375 Bacteria 1156
83 Ga0157371_10063174 3300013102 Bacteria 2624
84 Ga0157370_10006246 3300013104 Bacteria 13195
85 Ga0157374_10969653 3300013296 Bacteria 869
86 Ga0157378_10515614 3300013297 Bacteria 1196
87 Ga0157378_12038624 3300013297 Bacteria 624
88 Ga0163162_10261426 3300013306 Bacteria 1863
89 Ga0157372_10475581 3300013307 Bacteria 1457
90 Ga0157372_11061247 3300013307 Bacteria 938
91 Ga0157372_11442739 3300013307 Bacteria 793
92 Ga0157375_10123344 3300013308 Bacteria 2703
93 Ga0157380_10944768 3300014326 Bacteria 892
94 Ga0157379_10265554 3300014968 Bacteria 1560
95 Ga0157379_11348807 3300014968 Bacteria 690
96 Ga0213876_10000819 3300021384 Bacteria 21020
97 Ga0213876_10152827 3300021384 Bacteria 1227
98 Ga0209130_1055807 3300025284 Bacteria 702
99 Ga0207685_10298544 3300025905 Bacteria 796
100 Ga0207699_10153563 3300025906 Bacteria 1526
101 Ga0207654_10397418 3300025911 Bacteria 958
102 Ga0207707_10000419 3300025912 Bacteria 44410
103 Ga0207707_10399234 3300025912 Bacteria 1180
104 Ga0207671_10173315 3300025914 Bacteria 1676
105 Ga0207671_10778301 3300025914 Bacteria 759
106 Ga0207693_10013583 3300025915 Bacteria 6563
107 Ga0207663_10187289 3300025916 Bacteria 1483
108 Ga0207660_10146190 3300025917 Bacteria 1812
109 Ga0207660_10709857 3300025917 Bacteria 820
110 Ga0207652_10033175 3300025921 Bacteria 4346
111 Ga0207694_10043332 3300025924 Bacteria 3473
112 Ga0207694_10150654 3300025924 Bacteria 1874
113 Ga0207650_10039169 3300025925 Bacteria 3463
114 Ga0207700_10152377 3300025928 Bacteria 1912
115 Ga0207664_10234400 3300025929 Bacteria 1596
116 Ga0207664_10446037 3300025929 Bacteria 1155
117 Ga0207664_11347191 3300025929 Bacteria 634
118 Ga0207644_10025095 3300025931 Bacteria 4096
119 Ga0207690_10155875 3300025932 Bacteria 1697
120 Ga0207670_10240458 3300025936 Bacteria 1394
121 Ga0207669_10478370 3300025937 Bacteria 992
122 Ga0207665_10605108 3300025939 Bacteria 856
123 Ga0207691_10097079 3300025940 Bacteria 2634
124 Ga0207691_10116688 3300025940 Bacteria 2369
125 Ga0207711_10307740 3300025941 Bacteria 1462
126 Ga0207679_10040645 3300025945 Bacteria 3331
127 Ga0207679_10333135 3300025945 Bacteria 1318
128 Ga0207667_10860285 3300025949 Bacteria 900
129 Ga0207651_10224000 3300025960 Bacteria 1522
130 Ga0207640_10103594 3300025981 Bacteria 2001
131 Ga0207658_10035423 3300025986 Bacteria 3575
132 Ga0207677_10701053 3300026023 Bacteria 898
133 Ga0207677_11190063 3300026023 Bacteria 697
134 Ga0207678_10222770 3300026067 Bacteria 1615
135 Ga0207641_11311956 3300026088 Bacteria 724
136 Ga0207683_10085029 3300026121 Bacteria 2812
137 Ga0207683_10280771 3300026121 Bacteria 1522
138 Ga0268266_10048950 3300028379 Bacteria 3623
139 Ga0268266_10139807 3300028379 Bacteria 2172
140 Ga0307513_10757717 3300031456 Bacteria 676
141 Ga0307408_100880083 3300031548 Bacteria 818
142 Ga0373936_0189479 3300035113 Unclassified 905
143 Ga0373953_0266236 3300035117 Unclassified 746
144 Ga0373954_0524212 3300035118 Unclassified 587
145 Ga0373956_0184075 3300035119 Unclassified 988
146 Ga0373935_0365246 3300035692 Unclassified 1031
147 Ga0373947_0306909 3300035725 Bacteria 1059
148 Ga0373937_0057596 3300036401 Bacteria 3570
149 Ga0316582_0122989 3300036647 Bacteria 1738
150 Ga0436360_0627327 3300039438 Bacteria 1142
151 Ga0436362_0064598 3300039453 Bacteria 1060
152 Ga0436362_1015611 3300039453 Bacteria 1329
153 Ga0439437_022076 3300042000 Bacteria 774
154 Ga0450923_003662 3300042125 Bacteria 2346
155 Ga0450896_007060 3300042133 Unclassified 1546
156 Ga0450898_016667 3300042134 Bacteria 1256
157 Ga0450889_016851 3300042144 Unclassified 791
158 Ga0450893_0070366 3300042532 Bacteria 679
159 Ga0466967_0104804 3300045976 Bacteria 2590
160 Ga0495592_0098045 3300046454 Bacteria 2092
161 Ga0495629_0107132 3300046459 Bacteria 1950
162 Ga0495651_0447237 3300046462 Unclassified 835
163 Ga0495664_0036183 3300046477 Bacteria 2909
164 Ga0495618_0034489 3300046514 Bacteria 3173
165 Ga0495630_1151010 3300046517 Unclassified 587
166 Ga0495648_0011225 3300046524 Bacteria 6763
167 Ga0495652_0249395 3300046529 Unclassified 1316
168 Ga0495587_0026200 3300046536 Bacteria 3557
169 Ga0495645_0019327 3300046543 Bacteria 4905
170 Ga0495645_0206282 3300046543 Bacteria 1330
171 Ga0495667_0049219 3300046559 Bacteria 2782
172 Ga0495634_0273032 3300046642 Bacteria 1029
173 Ga0495635_0188705 3300046663 Unclassified 1400
174 Ga0495657_0086912 3300046675 Bacteria 2013
175 Ga0495623_0018767 3300046679 Bacteria 4466
176 Ga0495623_0103499 3300046679 Bacteria 1732
177 Ga0495600_0034299 3300046809 Bacteria 3294
178 Ga0495581_0703093 3300047315 Unclassified 583
179 Ga0495604_0027709 3300047317 Bacteria 4505
180 Ga0495684_0346209 3300047471 Unclassified 1056
181 Ga0495602_0099227 3300048088 Bacteria 2394
182 Ga0495614_0404434 3300048089 Bacteria 642
183 Ga0496100_0117555 3300048903 Bacteria 1856
184 Ga0496102_0087899 3300048905 Bacteria 2872
185 Ga0496102_1172769 3300048905 Bacteria 688
186 Ga0496104_0199246 3300048907 Bacteria 1914
187 Ga0496106_0097050 3300048909 Bacteria 2281
188 Ga0496110_0182067 3300048913 Bacteria 1908
189 Ga0496111_0044258 3300048914 Bacteria 3200
190 Ga0496112_0057108 3300048915 Bacteria 3842
191 Ga0496112_0065638 3300048915 Bacteria 3582
192 Ga0496113_0352775 3300048916 Bacteria 1180
193 Ga0496113_0400862 3300048916 Bacteria 1101
194 Ga0496114_0442930 3300048917 Bacteria 1150
195 Ga0496115_0077867 3300048918 Bacteria 2697
196 Ga0501036_0117235 3300049572 Bacteria 2249
197 Ga0501038_0185291 3300049574 Bacteria 1678
198 Ga0501039_0123692 3300049575 Bacteria 2028
199 Ga0501040_0009007 3300049576 Bacteria 6492
200 Ga0501042_0109103 3300049578 Bacteria 1992
201 Ga0501042_1245498 3300049578 Bacteria 542
202 Ga0501046_0262264 3300049580 Bacteria 1269
203 Ga0501072_0158081 3300049588 Bacteria 1808
204 Ga0501074_0923147 3300049590 Bacteria 614
205 Ga0501077_0439946 3300049593 Bacteria 835
206 Ga0501035_0127859 3300049822 Bacteria 2217
207 Ga0501035_0171213 3300049822 Bacteria 1876
208 Ga0501045_0049257 3300049824 Bacteria 3071
209 Ga0501045_0117815 3300049824 Bacteria 1971
210 Ga0501045_0550191 3300049824 Bacteria 856
211 nmdc:mga0k408_206990_c1 3300050493 Bacteria 1171
212 nmdc:mga06z11_484176_c1 3300050494 Bacteria 749
213 nmdc:mga05p37_1381252_c1 3300050507 Unclassified 711
214 nmdc:mga05p37_415069_c1 3300050507 Bacteria 1568
215 nmdc:mga05p37_565451_c1 3300050507 Bacteria 1291
216 nmdc:mga09592_155676_c1 3300050508 Bacteria 1973
217 nmdc:mga09592_181925_c1 3300050508 Bacteria 1819
218 nmdc:mga09592_63286_c1 3300050508 Bacteria 3131
219 nmdc:mga09592_79366_c1 3300050508 Bacteria 2794
220 nmdc:mga09592_927873_c1 3300050508 Bacteria 731
221 nmdc:mga0qj67_121778_c1 3300050509 Bacteria 2111
222 nmdc:mga0qj67_64982_c1 3300050509 Bacteria 2904
223 nmdc:mga0qj67_9231_c1 3300050509 Bacteria 7330
224 nmdc:mga06r32_123281_c1 3300050510 Bacteria 2558
225 nmdc:mga06r32_1526840_c1 3300050510 Bacteria 608
226 nmdc:mga06r32_189963_c1 3300050510 Bacteria 2042
227 nmdc:mga06r32_748546_c1 3300050510 Bacteria 940
228 nmdc:mga08y16_1108695_c1 3300050511 Bacteria 766
229 nmdc:mga08y16_255316_c1 3300050511 Bacteria 1811
230 nmdc:mga0n895_1215211_c1 3300050512 Bacteria 727
231 nmdc:mga0n895_726665_c1 3300050512 Bacteria 987
232 nmdc:mga0rr50_84627_c1 3300050513 Bacteria 2456
233 nmdc:mga08x19_694896_c1 3300050514 Bacteria 722
234 nmdc:mga0a205_226628_c1 3300050515 Bacteria 1753
235 Ga0495601_0050699 3300053077 Bacteria 2618
236 Ga0495612_0006970 3300053078 Bacteria 4624
237 Ga0495612_0268557 3300053078 Bacteria 761
238 Ga0495595_0024404 3300053084 Bacteria 2671
239 Ga0530510_1261436 3300061734 Bacteria 567
240 2513698104 2513237101 Bacteria 7952346
241 2728750044 2728368998 Bacteria 8720350
242 2793066700 2791355197 Bacteria 8420563
243 2793083786
244 2874607407 2874604998 Bacteria 7834745
245 2885377029 2885374607 Bacteria 8927485
246 2903755293 2903748898 Bacteria 9972761
247 2908741686 2908739725 Bacteria 8628932
248 2922386822 2922386360 Bacteria 7017218
249 8006972117 8006964411 Bacteria 8966052
250 8007001363 8006994254 Bacteria 8309700
251 8019565330 8019555841 Bacteria 9642137
252 8019575429 8019565922 Bacteria 9639779
253 8056679834 8056673599 Bacteria 7871253
254 Ga0070705_100054514
255 JGI25404J52841_10034367
256 JGI25405J52794_10049044
257 Ga0070670_100026319
258 Ga0070666_10307460
259 Ga0070680_100060753
260 Ga0070682_100164462
261 Ga0070689_100224541
262 Ga0070661_100122129
263 Ga0070671_100002306
264 Ga0070674_100023035
265 Ga0070673_100089116
266 Ga0070673_100860999
267 Ga0070688_100137271
268 Ga0070709_10087321
269 Ga0070714_100286705
270 Ga0070714_101611328
271 Ga0070713_100219972
272 Ga0070711_100222456
273 Ga0070694_100004171
274 Ga0070678_100050789
275 Ga0070681_10303633
276 Ga0070681_10720754
277 Ga0070679_100093330
278 Ga0070684_100898548
279 Ga0068853_101215035
280 Ga0070672_100283750
281 Ga0070672_100640210
282 Ga0070695_100096481
283 Ga0070693_100057543
284 Ga0070665_100114342
285 Ga0070665_100264313
286 Ga0070704_100124326
287 Ga0068855_101219620
288 Ga0068854_100136887
289 Ga0068854_101121627
290 Ga0068859_100496031
291 Ga0068864_100573218
292 Ga0068858_100315981
293 Ga0081455_10001255
294 Ga0081455_10091968
295 Ga0081540_1005577
296 Ga0081540_1017540
297 Ga0081539_10096704
298 Ga0070717_10461450
299 Ga0070712_100589353
300 Ga0075367_10202387
301 Ga0075366_10290602
302 Ga0097621_100303332
303 Ga0075428_100028369
304 Ga0075428_100098062
305 Ga0075428_100117867
306 Ga0075428_100159847
307 Ga0075428_100249648
308 Ga0075428_100627885
309 Ga0075430_100033434
310 Ga0075430_100035133
311 Ga0075430_100053034
312 Ga0075431_100150320
313 Ga0075431_100493376
314 Ga0075434_100276063
315 Ga0075429_100011523
316 Ga0075429_100091763
317 Ga0075429_100123836
318 Ga0075436_100851997
319 Ga0097620_100495983
320 Ga0075435_100044872
321 Ga0105240_10387423
322 Ga0105245_10094881
323 Ga0114129_10319233
324 Ga0114129_10610426
325 Ga0114129_10846624
326 Ga0114129_11142972
327 Ga0105243_10630062
328 Ga0105241_10092385
329 Ga0105242_10822718
330 Ga0105248_10240315
331 Ga0105237_11688887
332 Ga0105238_10114056
333 Ga0105249_11119419
334 Ga0105239_10119718
335 Ga0105239_10703216
336 Ga0157371_10063174
337 Ga0157370_10006246
338 Ga0157374_10969653
339 Ga0157378_10515614
340 Ga0157378_12038624
341 Ga0163162_10261426
342 Ga0157372_10475581
343 Ga0157372_11061247
344 Ga0157372_11442739
345 Ga0157375_10123344
346 Ga0157380_10944768
347 Ga0157379_10265554
348 Ga0157379_11348807
349 Ga0213876_10000819
350 Ga0213876_10152827
351 Ga0209130_1055807
352 Ga0207685_10298544
353 Ga0207699_10153563
354 Ga0207654_10397418
355 Ga0207707_10000419
356 Ga0207707_10399234
357 Ga0207671_10173315
358 Ga0207671_10778301
359 Ga0207693_10013583
360 Ga0207663_10187289
361 Ga0207660_10146190
362 Ga0207660_10709857
363 Ga0207652_10033175
364 Ga0207694_10043332
365 Ga0207694_10150654
366 Ga0207650_10039169
367 Ga0207700_10152377
368 Ga0207664_10234400
369 Ga0207664_10446037
370 Ga0207664_11347191
371 Ga0207644_10025095
372 Ga0207690_10155875
373 Ga0207670_10240458
374 Ga0207669_10478370
375 Ga0207665_10605108
376 Ga0207691_10097079
377 Ga0207691_10116688
378 Ga0207711_10307740
379 Ga0207679_10040645
380 Ga0207679_10333135
381 Ga0207667_10860285
382 Ga0207651_10224000
383 Ga0207640_10103594
384 Ga0207658_10035423
385 Ga0207677_10701053
386 Ga0207677_11190063
387 Ga0207678_10222770
388 Ga0207641_11311956
389 Ga0207683_10085029
390 Ga0207683_10280771
391 Ga0268266_10048950
392 Ga0268266_10139807
393 Ga0307513_10757717
394 Ga0307408_100880083
395 Ga0373936_0189479
396 Ga0373953_0266236
397 Ga0373954_0524212
398 Ga0373956_0184075
399 Ga0373935_0365246
400 Ga0373947_0306909
401 Ga0373937_0057596
402 Ga0316582_0122989
403 Ga0436360_0627327
404 Ga0436362_0064598
405 Ga0436362_1015611
406 Ga0439437_022076
407 Ga0450923_003662
408 Ga0450896_007060
409 Ga0450898_016667
410 Ga0450889_016851
411 Ga0450893_0070366
412 Ga0466967_0104804
413 Ga0495592_0098045
414 Ga0495629_0107132
415 Ga0495651_0447237
416 Ga0495664_0036183
417 Ga0495618_0034489
418 Ga0495630_1151010
419 Ga0495648_0011225
420 Ga0495652_0249395
421 Ga0495587_0026200
422 Ga0495645_0019327
423 Ga0495645_0206282
424 Ga0495667_0049219
425 Ga0495634_0273032
426 Ga0495635_0188705
427 Ga0495657_0086912
428 Ga0495623_0018767
429 Ga0495623_0103499
430 Ga0495600_0034299
431 Ga0495581_0703093
432 Ga0495604_0027709
433 Ga0495684_0346209
434 Ga0495602_0099227
435 Ga0495614_0404434
436 Ga0496100_0117555
437 Ga0496102_0087899
438 Ga0496102_1172769
439 Ga0496104_0199246
440 Ga0496106_0097050
441 Ga0496110_0182067
442 Ga0496111_0044258
443 Ga0496112_0057108
444 Ga0496112_0065638
445 Ga0496113_0352775
446 Ga0496113_0400862
447 Ga0496114_0442930
448 Ga0496115_0077867
449 Ga0501036_0117235
450 Ga0501038_0185291
451 Ga0501039_0123692
452 Ga0501040_0009007
453 Ga0501042_0109103
454 Ga0501042_1245498
455 Ga0501046_0262264
456 Ga0501072_0158081
457 Ga0501074_0923147
458 Ga0501077_0439946
459 Ga0501035_0127859
460 Ga0501035_0171213
461 Ga0501045_0049257
462 Ga0501045_0117815
463 Ga0501045_0550191
464 nmdc:mga0k408_206990_c1
465 nmdc:mga06z11_484176_c1
466 nmdc:mga05p37_1381252_c1
467 nmdc:mga05p37_415069_c1
468 nmdc:mga05p37_565451_c1
469 nmdc:mga09592_155676_c1
470 nmdc:mga09592_181925_c1
471 nmdc:mga09592_63286_c1
472 nmdc:mga09592_79366_c1
473 nmdc:mga09592_927873_c1
474 nmdc:mga0qj67_121778_c1
475 nmdc:mga0qj67_64982_c1
476 nmdc:mga0qj67_9231_c1
477 nmdc:mga06r32_123281_c1
478 nmdc:mga06r32_1526840_c1
479 nmdc:mga06r32_189963_c1
480 nmdc:mga06r32_748546_c1
481 nmdc:mga08y16_1108695_c1
482 nmdc:mga08y16_255316_c1
483 nmdc:mga0n895_1215211_c1
484 nmdc:mga0n895_726665_c1
485 nmdc:mga0rr50_84627_c1
486 nmdc:mga08x19_694896_c1
487 nmdc:mga0a205_226628_c1
488 Ga0495601_0050699
489 Ga0495612_0006970
490 Ga0495612_0268557
491 Ga0495595_0024404
492 Ga0530510_1261436
493 2513698104
494 2728750044
495 2793066700
496 2793083786
497 2874607407
498 2885377029
499 2903755293
500 2908741686
501 2922386822
502 8006972117
503 8007001363
504 8019565330
505 8019575429
506 8056679834

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04828

GFA

Glutathione-dependent formaldehyde-activating enzyme

43

136

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ajq-assembly3.cif.gz_E crystal structure of pa2722 from pseudomonas aeruginosa pao1 0.837 2 134
8ajq-assembly3.cif.gz_E crystal structure of pa2722 from pseudomonas aeruginosa pao1 0.7575 2 134
1xa8-assembly1.cif.gz_A crystal structure analysis of glutathione-dependent formaldehyde-activating enzyme (gfa) 0.7447 2 111
5kqq-assembly1.cif.gz_B crystal structure of the w153f variant of catalase-peroxidase from b. pseudomallei treated 0.7275 51 83
5sx0-assembly1.cif.gz_B crystal structure of an oxoferryl species of catalase-peroxidase katg at ph7.5 0.7261 51 83
ID Description Score Start End Superfamily
af_A0A1D6EPM0_14_114_2.170.150.70 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A; 0.7695 1 101 2.170.150.70
af_A0A1D6EPM0_14_114_2.170.150.70 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A; 0.7358 1 101 2.170.150.70
af_K7MPT9_9_124_2.170.150.70 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A; 0.7319 3 112 2.170.150.70
af_A0A0P0WS15_885_954_2.40.10.480 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.7234 54 83 2.40.10.480
af_O14034_2_133_3.90.1590.10 Alpha Beta;Alpha-Beta Complex;glutathione-dependent formaldehyde- activating enzyme (gfa);glutathione-dependent formaldehyde- activating enzyme (gfa) 0.7225 2 129 3.90.1590.10
ID Description Score Start End GO Terms
AF-A0A3N5GYF3-F1-model_v4 Aldehyde-activating protein 0.9434 1 102 GO:0016846
GO:0046872
AF-A0A1G3G2D1-F1-model_v4 deleted 0.9419 2 106
AF-A0A0R3M6V1-F1-model_v4 Aldehyde-activating protein 0.9402 1 155 GO:0016846
GO:0046872
AF-A0A7Y6T5Z3-F1-model_v4 deleted 0.9392 1 157
AF-A0A536X7N7-F1-model_v4 GFA family protein 0.9357 1 153 GO:0016846
GO:0046872

Map