F363841

General Info

Members Datasets Scaffolds Average Seq Length
253 185 248 248

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100034379|Ga0070714_1000343794
Length 280
Sequence MSVAVNRSTRSVREMELADSLSALRSRLAAAAESVGRKLDEIQLLPITKFFPATDVAILSRLGCADFGESRDQEAAAKVVEVDRLLDGQGEGDRASARRHWHMVGKIQRNKARSLAGWAHTAHSVSSTRVASALDRAVESALGEGRRTHPLRVYVQISLDGDVSRGGVDVSDTAAVDEICAQVDAAESLELVGLMGIPPLDWEPDRAFARLQSEHQRVRRAHPDAAGLSAGMSNDLEMAVKHGSTCVRVGTALLGQRPLSSPSIVTPVTSSSQTPPTPEP

Samples

Sample ID Description Type Environment
1 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
2 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
3 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
4 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
5 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
6 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
7 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
8 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
9 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
25 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
26 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
27 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
28 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
29 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
30 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
41 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
50 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
51 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
52 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
53 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
58 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
82 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
83 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
126 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
127 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
128 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
129 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
130 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
131 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
132 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
133 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
134 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
135 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
136 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
137 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
138 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
139 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
140 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
141 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
142 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
143 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
144 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
145 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
146 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
147 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
148 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
149 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
150 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
151 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
152 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
153 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
154 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
155 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
158 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
159 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
160 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
161 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
162 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
163 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
164 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
165 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
166 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
167 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
168 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
169 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
170 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
171 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
172 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
173 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
174 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
179 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
180 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
181 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
182 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
183 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
184 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
185 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.02
Metatranscriptomes 0
Isolates 1.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.53
Nodule 0.4
Rhizoplane 11.86
Rhizosphere 75.1
Stem 0
Stem Tuber 0
Unclassified 7.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24744J21845_10002581 3300002077 Bacteria 3698
2 JGI24742J22300_10002041 3300002244 Bacteria 3221
3 JGI24751J29686_10008468 3300002459 Bacteria 2106
4 Ga0055540_1001458 3300003792 Bacteria 14103
5 Ga0055540_1008302 3300003792 Bacteria 3756
6 Ga0070676_10039285 3300005328 Bacteria 2736
7 Ga0070676_10197978 3300005328 Bacteria 1315
8 Ga0068869_100087945 3300005334 Bacteria 2331
9 Ga0070666_10023757 3300005335 Bacteria 3992
10 Ga0070682_100357063 3300005337 Bacteria 1091
11 Ga0068868_100076320 3300005338 Bacteria 2679
12 Ga0068868_100270281 3300005338 Bacteria 1436
13 Ga0070691_10054312 3300005341 Bacteria 1917
14 Ga0070692_10260190 3300005345 Bacteria 1043
15 Ga0070668_100002426 3300005347 Bacteria 13715
16 Ga0070668_100007674 3300005347 Bacteria 8006
17 Ga0070668_100267558 3300005347 Bacteria 1424
18 Ga0070669_100072469 3300005353 Bacteria 2550
19 Ga0070675_100106701 3300005354 Bacteria 2364
20 Ga0070671_100004324 3300005355 Bacteria 11238
21 Ga0070671_100096896 3300005355 Bacteria 2473
22 Ga0070674_100001134 3300005356 Bacteria 14022
23 Ga0070667_100044168 3300005367 Bacteria 3741
24 Ga0070667_100171288 3300005367 Bacteria 1916
25 Ga0070714_100034379 3300005435 Bacteria 4245
26 Ga0070714_100159870 3300005435 Bacteria 2037
27 Ga0070710_10002714 3300005437 Bacteria 8415
28 Ga0070701_10028257 3300005438 Bacteria 2756
29 Ga0070711_100000477 3300005439 Bacteria 20831
30 Ga0070700_100010290 3300005441 Bacteria 5161
31 Ga0070694_100031169 3300005444 Bacteria 3494
32 Ga0070663_100180366 3300005455 Bacteria 1638
33 Ga0070678_100076605 3300005456 Bacteria 2520
34 Ga0070662_100113168 3300005457 Bacteria 2070
35 Ga0070685_10019743 3300005466 Bacteria 3640
36 Ga0068853_100035685 3300005539 Bacteria 4224
37 Ga0068853_100157831 3300005539 Bacteria 2045
38 Ga0070672_100075780 3300005543 Bacteria 2686
39 Ga0070686_100097204 3300005544 Bacteria 1982
40 Ga0070696_100012647 3300005546 Bacteria 5666
41 Ga0070693_100016777 3300005547 Bacteria 3795
42 Ga0070665_100006713 3300005548 Bacteria 11695
43 Ga0070665_100080329 3300005548 Bacteria 3266
44 Ga0070665_100341660 3300005548 Bacteria 1502
45 Ga0070704_100035775 3300005549 Bacteria 3378
46 Ga0068854_100000200 3300005578 Bacteria 40376
47 Ga0070702_100003234 3300005615 Bacteria 7248
48 Ga0068859_100122593 3300005617 Bacteria 2666
49 Ga0068866_10000476 3300005718 Bacteria 18365
50 Ga0068861_100252902 3300005719 Bacteria 1504
51 Ga0068863_100058271 3300005841 Bacteria 3655
52 Ga0068863_100085252 3300005841 Bacteria 2994
53 Ga0068858_100112038 3300005842 Bacteria 2548
54 Ga0068860_100246007 3300005843 Bacteria 1740
55 Ga0068862_100041154 3300005844 Bacteria 3931
56 Ga0081455_10044661 3300005937 Bacteria 3862
57 Ga0081455_10193727 3300005937 Bacteria 1528
58 Ga0075365_10164632 3300006038 Bacteria 1546
59 Ga0075364_10372786 3300006051 Bacteria 973
60 Ga0070716_100041071 3300006173 Bacteria 2575
61 Ga0070712_100011479 3300006175 Bacteria 5621
62 Ga0097621_100166006 3300006237 Bacteria 1901
63 Ga0075370_10126716 3300006353 Bacteria 1488
64 Ga0075428_100028776 3300006844 Bacteria 6149
65 Ga0075430_100013254 3300006846 Bacteria 7025
66 Ga0075431_100073918 3300006847 Bacteria 3517
67 Ga0068865_100006747 3300006881 Bacteria 7024
68 Ga0097620_100122593 3300006931 Bacteria 2666
69 Ga0099795_10006086 3300007788 Bacteria 3263
70 Ga0105245_10404457 3300009098 Bacteria 1365
71 Ga0105247_10000268 3300009101 Bacteria 48320
72 Ga0105243_10070929 3300009148 Bacteria 2815
73 Ga0105242_10005637 3300009176 Bacteria 9663
74 Ga0105248_10004593 3300009177 Bacteria 15285
75 Ga0105248_10007161 3300009177 Bacteria 12236
76 Ga0105237_10250321 3300009545 Bacteria 1774
77 Ga0105238_10341457 3300009551 Bacteria 1486
78 Ga0105249_10005976 3300009553 Bacteria 10546
79 Ga0105249_10415760 3300009553 Bacteria 1378
80 Ga0105239_10140553 3300010375 Bacteria 2690
81 Ga0105246_10411414 3300011119 Bacteria 1126
82 Ga0157373_10363344 3300013100 Bacteria 1034
83 Ga0157371_10040492 3300013102 Bacteria 3327
84 Ga0157378_10028123 3300013297 Bacteria 4959
85 Ga0163162_10614383 3300013306 Bacteria 1212
86 Ga0157372_10134857 3300013307 Bacteria 2843
87 Ga0163163_10078022 3300014325 Bacteria 3308
88 Ga0157380_10001781 3300014326 Bacteria 14227
89 Ga0157377_10079517 3300014745 Bacteria 1913
90 Ga0157379_10372227 3300014968 Bacteria 1310
91 Ga0157376_10026300 3300014969 Bacteria 4596
92 Ga0163161_10100909 3300017792 Bacteria 2148
93 Ga0163161_10358519 3300017792 Bacteria 1161
94 Ga0163161_10361136 3300017792 Bacteria 1157
95 Ga0209673_1005508 3300025273 Bacteria 6342
96 Ga0209051_1000594 3300025303 Bacteria 42766
97 Ga0209051_1001327 3300025303 Bacteria 21574
98 Ga0209051_1006344 3300025303 Bacteria 6691
99 Ga0207692_10028347 3300025898 Bacteria 2647
100 Ga0207688_10000202 3300025901 Bacteria 26552
101 Ga0207680_10013329 3300025903 Bacteria 4220
102 Ga0207647_10094829 3300025904 Bacteria 1777
103 Ga0207685_10086314 3300025905 Bacteria 1311
104 Ga0207699_10168619 3300025906 Bacteria 1463
105 Ga0207645_10022675 3300025907 Bacteria 4081
106 Ga0207671_10046736 3300025914 Bacteria 3203
107 Ga0207693_10000805 3300025915 Bacteria 28061
108 Ga0207693_10012335 3300025915 Bacteria 6904
109 Ga0207663_10051200 3300025916 Bacteria 2570
110 Ga0207663_10069466 3300025916 Bacteria 2266
111 Ga0207657_10043419 3300025919 Bacteria 3960
112 Ga0207681_10039714 3300025923 Bacteria 3126
113 Ga0207694_10346686 3300025924 Bacteria 1229
114 Ga0207687_10000192 3300025927 Bacteria 41036
115 Ga0207700_10110655 3300025928 Bacteria 2209
116 Ga0207644_10045917 3300025931 Bacteria 3109
117 Ga0207706_10152869 3300025933 Bacteria 2030
118 Ga0207686_10013523 3300025934 Bacteria 4518
119 Ga0207686_10468683 3300025934 Bacteria 972
120 Ga0207709_10013693 3300025935 Bacteria 4474
121 Ga0207669_10000713 3300025937 Bacteria 14367
122 Ga0207704_10000206 3300025938 Bacteria 30052
123 Ga0207665_10013671 3300025939 Bacteria 5340
124 Ga0207691_10013318 3300025940 Bacteria 7878
125 Ga0207711_10016727 3300025941 Bacteria 6091
126 Ga0207711_10039771 3300025941 Bacteria 4000
127 Ga0207712_10025536 3300025961 Bacteria 3926
128 Ga0207668_10002797 3300025972 Bacteria 10199
129 Ga0207640_10089923 3300025981 Bacteria 2123
130 Ga0207658_10004553 3300025986 Bacteria 9617
131 Ga0207677_10005007 3300026023 Bacteria 7157
132 Ga0207703_10003369 3300026035 Bacteria 13432
133 Ga0207703_10116923 3300026035 Bacteria 2284
134 Ga0207639_10031443 3300026041 Bacteria 3901
135 Ga0207639_10358955 3300026041 Bacteria 1303
136 Ga0207678_10206527 3300026067 Bacteria 1680
137 Ga0207708_10005172 3300026075 Bacteria 9623
138 Ga0207708_10190811 3300026075 Bacteria 1631
139 Ga0207641_10009724 3300026088 Bacteria 7920
140 Ga0207641_10266429 3300026088 Bacteria 1606
141 Ga0207648_10002728 3300026089 Bacteria 18757
142 Ga0207675_100165796 3300026118 Bacteria 2110
143 Ga0207675_100181147 3300026118 Bacteria 2017
144 Ga0207683_10000275 3300026121 Bacteria 46018
145 Ga0207683_10015400 3300026121 Bacteria 6511
146 Ga0207683_10103302 3300026121 Bacteria 2546
147 Ga0268266_10009283 3300028379 Bacteria 8677
148 Ga0268266_10009953 3300028379 Bacteria 8346
149 Ga0268265_10008462 3300028380 Bacteria 6949
150 Ga0268264_10003853 3300028381 Bacteria 12873
151 Ga0307407_10174144 3300031903 Bacteria 1420
152 Ga0373951_0032242 3300035091 Bacteria 1239
153 Ga0436364_0743706 3300037853 Bacteria 1538
154 Ga0436364_1300741 3300037853 Bacteria 19842
155 Ga0436365_0634291 3300039437 Bacteria 58106
156 Ga0436363_0899289 3300039450 Bacteria 1286
157 Ga0436363_1459843 3300039450 Bacteria 2151
158 Ga0439466_0011289 3300041411 Bacteria 3306
159 Ga0439431_0014077 3300041997 Bacteria 1851
160 Ga0439442_043541 3300042002 Bacteria 945
161 Ga0439445_0006135 3300042004 Bacteria 2756
162 Ga0466969_0021528 3300044656 Bacteria 3333
163 Ga0466972_0017818 3300044658 Bacteria 3554
164 Ga0466972_0063104 3300044658 Bacteria 1775
165 Ga0466966_0000230 3300044684 Bacteria 37271
166 Ga0466966_0040087 3300044684 Bacteria 3014
167 Ga0466966_0183534 3300044684 Bacteria 1269
168 Ga0466961_0006643 3300044693 Bacteria 7356
169 Ga0466961_0013303 3300044693 Bacteria 5267
170 Ga0466961_0016258 3300044693 Bacteria 4779
171 Ga0466963_0036821 3300044694 Bacteria 3192
172 Ga0466968_0000489 3300044735 Bacteria 13398
173 Ga0466968_0023452 3300044735 Bacteria 2514
174 Ga0466970_0002574 3300044765 Bacteria 8747
175 Ga0466970_0014557 3300044765 Bacteria 4040
176 Ga0466957_0053782 3300044842 Bacteria 2456
177 Ga0466957_0057704 3300044842 Bacteria 2377
178 Ga0466957_0237720 3300044842 Bacteria 1208
179 Ga0466957_0247295 3300044842 Bacteria 1185
180 Ga0466960_0047182 3300044901 Bacteria 2065
181 Ga0466959_0036474 3300045049 Bacteria 3633
182 Ga0466958_0002104 3300045836 Bacteria 9870
183 Ga0466958_0032938 3300045836 Bacteria 3085
184 Ga0466958_0100128 3300045836 Bacteria 1801
185 Ga0466967_0329285 3300045976 Bacteria 1475
186 Ga0495638_0002948 3300046460 Bacteria 13580
187 Ga0495648_0002006 3300046524 Bacteria 19281
188 Ga0495668_0055548 3300046616 Bacteria 2186
189 Ga0495611_0005267 3300046648 Bacteria 5541
190 Ga0495649_0086297 3300046694 Bacteria 1675
191 Ga0495672_0013651 3300047320 Bacteria 5592
192 Ga0495672_0055251 3300047320 Bacteria 2318
193 Ga0495673_0000367 3300047469 Bacteria 54316
194 Ga0495686_0016452 3300047472 Bacteria 5015
195 Ga0496100_0000822 3300048903 Bacteria 14896
196 Ga0496100_0001070 3300048903 Bacteria 13194
197 Ga0496100_0003331 3300048903 Bacteria 8366
198 Ga0496101_0000046 3300048904 Bacteria 155997
199 Ga0496101_0000299 3300048904 Bacteria 34617
200 Ga0496101_0000384 3300048904 Bacteria 29189
201 Ga0496102_0000025 3300048905 Bacteria 227201
202 Ga0496102_0002934 3300048905 Bacteria 14459
203 Ga0496102_0033054 3300048905 Bacteria 4647
204 Ga0496103_0000022 3300048906 Bacteria 227208
205 Ga0496103_0046438 3300048906 Bacteria 2681
206 Ga0496103_0066790 3300048906 Bacteria 2245
207 Ga0496103_0239874 3300048906 Bacteria 1166
208 Ga0496104_0000681 3300048907 Bacteria 29192
209 Ga0496104_0007938 3300048907 Bacteria 9412
210 Ga0496104_0600056 3300048907 Bacteria 1011
211 Ga0496105_0017897 3300048908 Bacteria 5687
212 Ga0496106_0000303 3300048909 Bacteria 34592
213 Ga0496106_0008726 3300048909 Bacteria 7497
214 Ga0496106_0016431 3300048909 Bacteria 5476
215 Ga0496107_0000285 3300048910 Bacteria 26858
216 Ga0496107_0002245 3300048910 Bacteria 12445
217 Ga0496107_0011491 3300048910 Bacteria 6168
218 Ga0496108_0078341 3300048911 Bacteria 2797
219 Ga0496109_0048181 3300048912 Bacteria 3877
220 Ga0496110_0443304 3300048913 Bacteria 1183
221 Ga0496114_0000581 3300048917 Bacteria 27005
222 Ga0496114_0003014 3300048917 Bacteria 12923
223 Ga0496114_0114082 3300048917 Bacteria 2317
224 Ga0496115_0015459 3300048918 Bacteria 5789
225 Ga0496116_0000059 3300048919 Bacteria 274491
226 Ga0496117_0000055 3300048920 Bacteria 274518
227 Ga0496117_0033254 3300048920 Bacteria 3902
228 Ga0496118_0000058 3300048921 Bacteria 227245
229 Ga0496118_0000571 3300048921 Bacteria 61051
230 Ga0496119_0000278 3300048922 Bacteria 71878
231 Ga0496120_0000384 3300048923 Bacteria 71475
232 Ga0496121_0000113 3300048924 Bacteria 181807
233 Ga0496126_0003617 3300048929 Bacteria 19324
234 Ga0496126_0269924 3300048929 Bacteria 1412
235 Ga0501034_0151086 3300049571 Bacteria 2298
236 Ga0501043_0405316 3300049579 Bacteria 1030
237 Ga0501047_0006046 3300049581 Bacteria 11384
238 Ga0501035_0000481 3300049822 Bacteria 44803
239 Ga0501035_0366698 3300049822 Bacteria 1203
240 Ga0501035_0405863 3300049822 Bacteria 1133
241 Ga0501044_0002173 3300049823 Bacteria 22487
242 nmdc:mga07m45_162014_c1 3300050496 Bacteria 973
243 nmdc:mga0qj67_14115_c1 3300050509 Bacteria 6034
244 nmdc:mga06r32_63642_c1 3300050510 Bacteria 3556
245 nmdc:mga0sz30_527_c1 3300050516 Bacteria 14277
246 Ga0500610_0009181 3300053079 Bacteria 4363
247 Ga0500643_052309 3300053087 Bacteria 1164
248 Ga0500642_0024201 3300053130 Bacteria 2450

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048906 Ga0496103_0066790 Ga0496103_0066790_291_1076 218
2 3300005456 Ga0070678_100076605 Ga0070678_1000766053 221
3 3300005548 Ga0070665_100341660 Ga0070665_1003416602 221
4 3300005841 Ga0068863_100085252 Ga0068863_1000852523 221
5 3300009177 Ga0105248_10007161 Ga0105248_100071615 221
6 3300011119 Ga0105246_10411414 Ga0105246_104114142 221
7 3300025941 Ga0207711_10039771 Ga0207711_100397715 221
8 3300026088 Ga0207641_10266429 Ga0207641_102664292 221
9 3300026121 Ga0207683_10103302 Ga0207683_101033023 221
10 3300048903 Ga0496100_0000822 Ga0496100_0000822_9822_10562 221
11 3300048904 Ga0496101_0000299 Ga0496101_0000299_16396_17136 221
12 3300048907 Ga0496104_0000681 Ga0496104_0000681_20049_20789 221
13 3300048908 Ga0496105_0017897 Ga0496105_0017897_868_1608 221
14 3300048909 Ga0496106_0000303 Ga0496106_0000303_9821_10561 221
15 3300048910 Ga0496107_0000285 Ga0496107_0000285_20726_21466 221
16 3300048917 Ga0496114_0000581 Ga0496114_0000581_2312_3052 221
17 3300037853 Ga0436364_1300741 Ga0436364_1300741_494_1189 225
18 3300039437 Ga0436365_0634291 Ga0436365_0634291_6931_7626 225
19 3300049579 Ga0501043_0405316 Ga0501043_0405316_277_981 225
20 3300044656 Ga0466969_0021528 Ga0466969_0021528_1785_2570 226
21 3300044684 Ga0466966_0000230 Ga0466966_0000230_18997_19782 226
22 3300044693 Ga0466961_0006643 Ga0466961_0006643_4777_5562 226
23 3300044735 Ga0466968_0023452 Ga0466968_0023452_163_948 226
24 3300044842 Ga0466957_0057704 Ga0466957_0057704_1290_2075 226
25 3300045836 Ga0466958_0002104 Ga0466958_0002104_1873_2658 226
26 3300046694 Ga0495649_0086297 Ga0495649_0086297_304_1044 231
27 3300050496 nmdc:mga07m45_162014_c1 nmdc:mga07m45_162014_c1_85_906 231
28 3300053079 Ga0500610_0009181 Ga0500610_0009181_645_1385 231
29 3300044765 Ga0466970_0014557 Ga0466970_0014557_2114_2857 236
30 3300048907 Ga0496104_0600056 Ga0496104_0600056_219_959 236
31 3300049571 Ga0501034_0151086 Ga0501034_0151086_653_1480 242
32 3300049581 Ga0501047_0006046 Ga0501047_0006046_149_976 242
33 3300049822 Ga0501035_0000481 Ga0501035_0000481_5160_5987 242
34 3300049823 Ga0501044_0002173 Ga0501044_0002173_5160_5987 242
35 iso_pu_bacteria 2643221687 2644488812 242
36 iso_pu_bacteria 2902792274 2902797078 242
37 iso_pu_bacteria 2902837492 2902838686 242
38 iso_pu_bacteria 2939582691 2939588345 242
39 3300005937 Ga0081455_10193727 Ga0081455_101937272 243
40 3300053087 Ga0500643_052309 Ga0500643_052309_223_954 243
41 3300041411 Ga0439466_0011289 Ga0439466_0011289_100_849 244
42 3300041997 Ga0439431_0014077 Ga0439431_0014077_223_972 244
43 3300042002 Ga0439442_043541 Ga0439442_043541_114_863 244
44 3300042004 Ga0439445_0006135 Ga0439445_0006135_915_1664 244
45 3300003792 Ga0055540_1001458 Ga0055540_10014583 246
46 3300003792 Ga0055540_1008302 Ga0055540_10083023 246
47 3300005347 Ga0070668_100002426 Ga0070668_1000024267 246
48 3300005539 Ga0068853_100157831 Ga0068853_1001578313 246
49 3300006038 Ga0075365_10164632 Ga0075365_101646322 246
50 3300006051 Ga0075364_10372786 Ga0075364_103727862 246
51 3300009551 Ga0105238_10341457 Ga0105238_103414572 246
52 3300025273 Ga0209673_1005508 Ga0209673_10055084 246
53 3300025303 Ga0209051_1000594 Ga0209051_100059423 246
54 3300025303 Ga0209051_1001327 Ga0209051_10013277 246
55 3300025303 Ga0209051_1006344 Ga0209051_10063446 246
56 3300025924 Ga0207694_10346686 Ga0207694_103466862 246
57 3300025972 Ga0207668_10002797 Ga0207668_100027975 246
58 3300026041 Ga0207639_10358955 Ga0207639_103589552 246
59 3300031903 Ga0307407_10174144 Ga0307407_101741442 246
60 3300046460 Ga0495638_0002948 Ga0495638_0002948_2524_3264 246
61 3300046524 Ga0495648_0002006 Ga0495648_0002006_7122_7874 246
62 3300046616 Ga0495668_0055548 Ga0495668_0055548_70_822 246
63 3300046648 Ga0495611_0005267 Ga0495611_0005267_3781_4533 246
64 3300047320 Ga0495672_0013651 Ga0495672_0013651_4794_5546 246
65 3300047469 Ga0495673_0000367 Ga0495673_0000367_52982_53734 246
66 3300047472 Ga0495686_0016452 Ga0495686_0016452_1201_1953 246
67 3300048903 Ga0496100_0001070 Ga0496100_0001070_11179_11931 246
68 3300048904 Ga0496101_0000046 Ga0496101_0000046_43273_44025 246
69 3300048905 Ga0496102_0000025 Ga0496102_0000025_89974_90726 246
70 3300048906 Ga0496103_0000022 Ga0496103_0000022_89974_90726 246
71 3300048909 Ga0496106_0016431 Ga0496106_0016431_1919_2671 246
72 3300048910 Ga0496107_0011491 Ga0496107_0011491_2590_3342 246
73 3300048919 Ga0496116_0000059 Ga0496116_0000059_183766_184518 246
74 3300048920 Ga0496117_0000055 Ga0496117_0000055_89974_90726 246
75 3300048920 Ga0496117_0033254 Ga0496117_0033254_1846_2622 246
76 3300048921 Ga0496118_0000058 Ga0496118_0000058_89974_90726 246
77 3300048921 Ga0496118_0000571 Ga0496118_0000571_39911_40687 246
78 3300048922 Ga0496119_0000278 Ga0496119_0000278_27747_28499 246
79 3300048923 Ga0496120_0000384 Ga0496120_0000384_42977_43729 246
80 3300048924 Ga0496121_0000113 Ga0496121_0000113_137777_138529 246
81 3300048929 Ga0496126_0003617 Ga0496126_0003617_5668_6420 246
82 3300048929 Ga0496126_0269924 Ga0496126_0269924_536_1288 246
83 3300049822 Ga0501035_0366698 Ga0501035_0366698_304_1089 246
84 3300050516 nmdc:mga0sz30_527_c1 nmdc:mga0sz30_527_c1_2284_3036 246
85 3300017792 Ga0163161_10358519 Ga0163161_103585192 247
86 3300044693 Ga0466961_0013303 Ga0466961_0013303_2799_3542 247
87 3300044694 Ga0466963_0036821 Ga0466963_0036821_141_932 247
88 3300045976 Ga0466967_0329285 Ga0466967_0329285_554_1345 247
89 3300049822 Ga0501035_0405863 Ga0501035_0405863_196_999 247
90 3300005435 Ga0070714_100034379 Ga0070714_1000343794 248
91 3300005435 Ga0070714_100159870 Ga0070714_1001598702 248
92 3300025928 Ga0207700_10110655 Ga0207700_101106553 248
93 3300039450 Ga0436363_0899289 Ga0436363_0899289_104_859 248
94 iso_pu_bacteria 2842134933 2842137524 248
95 3300002077 JGI24744J21845_10002581 JGI24744J21845_100025811 249
96 3300002244 JGI24742J22300_10002041 JGI24742J22300_100020413 249
97 3300002459 JGI24751J29686_10008468 JGI24751J29686_100084682 249
98 3300005328 Ga0070676_10039285 Ga0070676_100392853 249
99 3300005328 Ga0070676_10197978 Ga0070676_101979782 249
100 3300005334 Ga0068869_100087945 Ga0068869_1000879453 249
101 3300005335 Ga0070666_10023757 Ga0070666_100237573 249
102 3300005337 Ga0070682_100357063 Ga0070682_1003570631 249
103 3300005338 Ga0068868_100076320 Ga0068868_1000763203 249
104 3300005338 Ga0068868_100270281 Ga0068868_1002702812 249
105 3300005341 Ga0070691_10054312 Ga0070691_100543123 249
106 3300005345 Ga0070692_10260190 Ga0070692_102601902 249
107 3300005347 Ga0070668_100007674 Ga0070668_1000076741 249
108 3300005347 Ga0070668_100267558 Ga0070668_1002675582 249
109 3300005353 Ga0070669_100072469 Ga0070669_1000724694 249
110 3300005354 Ga0070675_100106701 Ga0070675_1001067013 249
111 3300005355 Ga0070671_100004324 Ga0070671_10000432410 249
112 3300005355 Ga0070671_100096896 Ga0070671_1000968962 249
113 3300005356 Ga0070674_100001134 Ga0070674_10000113411 249
114 3300005367 Ga0070667_100044168 Ga0070667_1000441683 249
115 3300005367 Ga0070667_100171288 Ga0070667_1001712881 249
116 3300005437 Ga0070710_10002714 Ga0070710_100027141 249
117 3300005438 Ga0070701_10028257 Ga0070701_100282573 249
118 3300005439 Ga0070711_100000477 Ga0070711_10000047715 249
119 3300005441 Ga0070700_100010290 Ga0070700_1000102905 249
120 3300005444 Ga0070694_100031169 Ga0070694_1000311695 249
121 3300005455 Ga0070663_100180366 Ga0070663_1001803662 249
122 3300005457 Ga0070662_100113168 Ga0070662_1001131681 249
123 3300005466 Ga0070685_10019743 Ga0070685_100197433 249
124 3300005539 Ga0068853_100035685 Ga0068853_1000356853 249
125 3300005543 Ga0070672_100075780 Ga0070672_1000757803 249
126 3300005544 Ga0070686_100097204 Ga0070686_1000972042 249
127 3300005546 Ga0070696_100012647 Ga0070696_1000126474 249
128 3300005547 Ga0070693_100016777 Ga0070693_1000167773 249
129 3300005548 Ga0070665_100006713 Ga0070665_10000671310 249
130 3300005548 Ga0070665_100080329 Ga0070665_1000803293 249
131 3300005549 Ga0070704_100035775 Ga0070704_1000357755 249
132 3300005578 Ga0068854_100000200 Ga0068854_10000020015 249
133 3300005615 Ga0070702_100003234 Ga0070702_1000032345 249
134 3300005617 Ga0068859_100122593 Ga0068859_1001225933 249
135 3300005718 Ga0068866_10000476 Ga0068866_1000047615 249
136 3300005719 Ga0068861_100252902 Ga0068861_1002529022 249
137 3300005841 Ga0068863_100058271 Ga0068863_1000582713 249
138 3300005842 Ga0068858_100112038 Ga0068858_1001120381 249
139 3300005843 Ga0068860_100246007 Ga0068860_1002460073 249
140 3300005844 Ga0068862_100041154 Ga0068862_1000411543 249
141 3300005937 Ga0081455_10044661 Ga0081455_100446615 249
142 3300006173 Ga0070716_100041071 Ga0070716_1000410713 249
143 3300006175 Ga0070712_100011479 Ga0070712_1000114796 249
144 3300006237 Ga0097621_100166006 Ga0097621_1001660063 249
145 3300006353 Ga0075370_10126716 Ga0075370_101267162 249
146 3300006844 Ga0075428_100028776 Ga0075428_1000287765 249
147 3300006846 Ga0075430_100013254 Ga0075430_1000132546 249
148 3300006847 Ga0075431_100073918 Ga0075431_1000739184 249
149 3300006881 Ga0068865_100006747 Ga0068865_1000067473 249
150 3300006931 Ga0097620_100122593 Ga0097620_1001225933 249
151 3300007788 Ga0099795_10006086 Ga0099795_100060862 249
152 3300009098 Ga0105245_10404457 Ga0105245_104044571 249
153 3300009101 Ga0105247_10000268 Ga0105247_1000026843 249
154 3300009148 Ga0105243_10070929 Ga0105243_100709292 249
155 3300009176 Ga0105242_10005637 Ga0105242_100056379 249
156 3300009177 Ga0105248_10004593 Ga0105248_100045933 249
157 3300009545 Ga0105237_10250321 Ga0105237_102503211 249
158 3300009553 Ga0105249_10005976 Ga0105249_100059768 249
159 3300009553 Ga0105249_10415760 Ga0105249_104157601 249
160 3300010375 Ga0105239_10140553 Ga0105239_101405533 249
161 3300013100 Ga0157373_10363344 Ga0157373_103633442 249
162 3300013102 Ga0157371_10040492 Ga0157371_100404924 249
163 3300013297 Ga0157378_10028123 Ga0157378_100281233 249
164 3300013306 Ga0163162_10614383 Ga0163162_106143832 249
165 3300013307 Ga0157372_10134857 Ga0157372_101348573 249
166 3300014325 Ga0163163_10078022 Ga0163163_100780223 249
167 3300014326 Ga0157380_10001781 Ga0157380_1000178110 249
168 3300014745 Ga0157377_10079517 Ga0157377_100795171 249
169 3300014968 Ga0157379_10372227 Ga0157379_103722272 249
170 3300014969 Ga0157376_10026300 Ga0157376_100263003 249
171 3300017792 Ga0163161_10100909 Ga0163161_101009093 249
172 3300017792 Ga0163161_10361136 Ga0163161_103611362 249
173 3300025898 Ga0207692_10028347 Ga0207692_100283472 249
174 3300025901 Ga0207688_10000202 Ga0207688_100002021 249
175 3300025903 Ga0207680_10013329 Ga0207680_100133293 249
176 3300025904 Ga0207647_10094829 Ga0207647_100948292 249
177 3300025905 Ga0207685_10086314 Ga0207685_100863142 249
178 3300025906 Ga0207699_10168619 Ga0207699_101686192 249
179 3300025907 Ga0207645_10022675 Ga0207645_100226753 249
180 3300025914 Ga0207671_10046736 Ga0207671_100467364 249
181 3300025915 Ga0207693_10000805 Ga0207693_1000080525 249
182 3300025915 Ga0207693_10012335 Ga0207693_100123351 249
183 3300025916 Ga0207663_10051200 Ga0207663_100512003 249
184 3300025916 Ga0207663_10069466 Ga0207663_100694663 249
185 3300025919 Ga0207657_10043419 Ga0207657_100434194 249
186 3300025923 Ga0207681_10039714 Ga0207681_100397143 249
187 3300025927 Ga0207687_10000192 Ga0207687_100001926 249
188 3300025931 Ga0207644_10045917 Ga0207644_100459172 249
189 3300025933 Ga0207706_10152869 Ga0207706_101528691 249
190 3300025934 Ga0207686_10013523 Ga0207686_100135236 249
191 3300025934 Ga0207686_10468683 Ga0207686_104686832 249
192 3300025935 Ga0207709_10013693 Ga0207709_100136932 249
193 3300025937 Ga0207669_10000713 Ga0207669_1000071310 249
194 3300025938 Ga0207704_10000206 Ga0207704_100002065 249
195 3300025939 Ga0207665_10013671 Ga0207665_100136711 249
196 3300025940 Ga0207691_10013318 Ga0207691_100133183 249
197 3300025941 Ga0207711_10016727 Ga0207711_100167272 249
198 3300025961 Ga0207712_10025536 Ga0207712_100255366 249
199 3300025981 Ga0207640_10089923 Ga0207640_100899232 249
200 3300025986 Ga0207658_10004553 Ga0207658_100045534 249
201 3300026023 Ga0207677_10005007 Ga0207677_100050079 249
202 3300026035 Ga0207703_10003369 Ga0207703_100033695 249
203 3300026035 Ga0207703_10116923 Ga0207703_101169233 249
204 3300026041 Ga0207639_10031443 Ga0207639_100314436 249
205 3300026067 Ga0207678_10206527 Ga0207678_102065271 249
206 3300026075 Ga0207708_10005172 Ga0207708_100051721 249
207 3300026075 Ga0207708_10190811 Ga0207708_101908111 249
208 3300026088 Ga0207641_10009724 Ga0207641_100097243 249
209 3300026089 Ga0207648_10002728 Ga0207648_100027281 249
210 3300026118 Ga0207675_100165796 Ga0207675_1001657961 249
211 3300026118 Ga0207675_100181147 Ga0207675_1001811473 249
212 3300026121 Ga0207683_10000275 Ga0207683_1000027543 249
213 3300026121 Ga0207683_10015400 Ga0207683_100154002 249
214 3300028379 Ga0268266_10009283 Ga0268266_100092836 249
215 3300028379 Ga0268266_10009953 Ga0268266_100099538 249
216 3300028380 Ga0268265_10008462 Ga0268265_100084627 249
217 3300028381 Ga0268264_10003853 Ga0268264_1000385310 249
218 3300035091 Ga0373951_0032242 Ga0373951_0032242_314_1072 249
219 3300037853 Ga0436364_0743706 Ga0436364_0743706_101_895 249
220 3300039450 Ga0436363_1459843 Ga0436363_1459843_682_1464 249
221 3300044658 Ga0466972_0017818 Ga0466972_0017818_2623_3381 249
222 3300044658 Ga0466972_0063104 Ga0466972_0063104_127_876 249
223 3300044684 Ga0466966_0040087 Ga0466966_0040087_885_1667 249
224 3300044684 Ga0466966_0183534 Ga0466966_0183534_297_1079 249
225 3300044693 Ga0466961_0016258 Ga0466961_0016258_1688_2470 249
226 3300044735 Ga0466968_0000489 Ga0466968_0000489_11848_12630 249
227 3300044765 Ga0466970_0002574 Ga0466970_0002574_2669_3451 249
228 3300044842 Ga0466957_0053782 Ga0466957_0053782_565_1323 249
229 3300044842 Ga0466957_0237720 Ga0466957_0237720_156_938 249
230 3300044842 Ga0466957_0247295 Ga0466957_0247295_174_977 249
231 3300044901 Ga0466960_0047182 Ga0466960_0047182_1188_1946 249
232 3300045049 Ga0466959_0036474 Ga0466959_0036474_1468_2250 249
233 3300045836 Ga0466958_0032938 Ga0466958_0032938_1244_2026 249
234 3300045836 Ga0466958_0100128 Ga0466958_0100128_797_1591 249
235 3300047320 Ga0495672_0055251 Ga0495672_0055251_1201_1950 249
236 3300048903 Ga0496100_0003331 Ga0496100_0003331_4079_4828 249
237 3300048904 Ga0496101_0000384 Ga0496101_0000384_26048_26797 249
238 3300048905 Ga0496102_0002934 Ga0496102_0002934_10719_11468 249
239 3300048905 Ga0496102_0033054 Ga0496102_0033054_3213_3962 249
240 3300048906 Ga0496103_0046438 Ga0496103_0046438_1323_2072 249
241 3300048906 Ga0496103_0239874 Ga0496103_0239874_208_957 249
242 3300048907 Ga0496104_0007938 Ga0496104_0007938_7634_8383 249
243 3300048909 Ga0496106_0008726 Ga0496106_0008726_477_1226 249
244 3300048910 Ga0496107_0002245 Ga0496107_0002245_10759_11508 249
245 3300048911 Ga0496108_0078341 Ga0496108_0078341_1308_2057 249
246 3300048912 Ga0496109_0048181 Ga0496109_0048181_1796_2545 249
247 3300048913 Ga0496110_0443304 Ga0496110_0443304_97_846 249
248 3300048917 Ga0496114_0003014 Ga0496114_0003014_8264_9013 249
249 3300048917 Ga0496114_0114082 Ga0496114_0114082_1462_2220 249
250 3300048918 Ga0496115_0015459 Ga0496115_0015459_1332_2081 249
251 3300050509 nmdc:mga0qj67_14115_c1 nmdc:mga0qj67_14115_c1_2843_3592 249
252 3300050510 nmdc:mga06r32_63642_c1 nmdc:mga06r32_63642_c1_1708_2457 249
253 3300053130 Ga0500642_0024201 Ga0500642_0024201_1523_2323 249

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01168

Ala_racemase_N

Alanine racemase, N-terminal domain

20

258

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3r79-assembly3.cif.gz_B crystal structure of an uncharactertized protein from agrobacterium tumefaciens 0.9407 12 242
3r79-assembly3.cif.gz_A-2 crystal structure of an uncharactertized protein from agrobacterium tumefaciens 0.9335 12 244
3sy1-assembly1.cif.gz_A crystal structure of engineered protein. northeast structural genomics consortium target or70 0.9316 12 242
7uat-assembly1.cif.gz_A the crystal structure of the k36a mutant of e. coli yggs in complex with plp 0.9312 12 240
1w8g-assembly1.cif.gz_A crystal structure of e. coli k-12 yggs 0.9296 12 242
ID Description Score Start End Superfamily
af_P9WFQ7_2_257_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9414 2 248 3.20.20.10
3r79B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9383 12 242 3.20.20.10
af_P9WFQ7_2_257_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9304 2 248 3.20.20.10
1w8gA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9296 12 242 3.20.20.10
1w8gA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9176 12 242 3.20.20.10
ID Description Score Start End GO Terms
AF-A0A520EDY3-F1-model_v4 YggS family pyridoxal phosphate enzyme 0.984 8 183 GO:0030170
AF-A0A2S9GF73-F1-model_v4 YggS family pyridoxal phosphate enzyme 0.9806 126 209
AF-A0A2S8LXB1-F1-model_v4 deleted 0.9774 1 214
AF-A0A2S9F1K0-F1-model_v4 YggS family pyridoxal phosphate enzyme 0.9764 1 165 GO:0030170
AF-A0A2S8LXB1-F1-model_v4 deleted 0.9728 1 214

Feature Viewer

pLDDT pTM Quality
92.42 0.9 High
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Predicted Structure (AlphaFold2)

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