F363807

General Info

Members Datasets Scaffolds Average Seq Length
253 112 506 438

Family's Representative Sequence

Representative Sequence 3300005339|Ga0070660_100040469|Ga0070660_1000404692
Length 436
Sequence MIRLYDTMAREKRAFEPADPSRVTMYVCGPTVYNRAHIGNARPYVVFDLLARLLRHHYGADSLVYARNFTDVDDKIIDAARAENVDPSIVTSRYEKLFLDDMAALSVLPTTLMPRATEHIGEMIGMIARLIETGHAYEAEEHVLFHVPSDRDYGVLSRRDRDAMIAGARVEVASYKKDPADFVLWKPSAPDVIGWDSPWGRGRPGWHIECSAMIERHLGQTIDIHAGGIDLIFPHHENEIAQSRCAHGGAALARYWLHNGFLSMGGGEKMSKSLGNVVSVGELLEQGYRGEVLRLALLSAHYRQPLPWTDTLVAQAKSTLDGLYRKAGGAESGAIDEGVLEALGDDLNTPLALSRLSALDGGSLKASAQLLGLLQDSANDWFQGDADSSGIETRIAERAEAKKNRDFANADRIRSELQAEGIVLEDGPGGTTWRRE

Samples

Sample ID Description Type Environment
1 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
33 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
66 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
67 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
70 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
71 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
72 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
73 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
74 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
75 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
81 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
82 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
83 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
84 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
85 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
86 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
87 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
88 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
92 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
93 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
94 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
95 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
96 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
97 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
98 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
107 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
108 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
109 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
110 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
111 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
112 2896429255 Sphingomonas rhizophila KACC 19189 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.6
Metatranscriptomes 0
Isolates 0.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.4
Nodule 0
Rhizoplane 5.93
Rhizosphere 92.89
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070660_100040469 3300005339 Bacteria 3547
2 JGI24737J22298_10000319 3300001990 Bacteria 16081
3 JGI24735J21928_10015136 3300002067 Bacteria 2410
4 Ga0070658_10000379 3300005327 Bacteria 38762
5 Ga0070658_10003567 3300005327 Bacteria 12785
6 Ga0070658_10139645 3300005327 Bacteria 2023
7 Ga0070676_10097035 3300005328 Bacteria 1815
8 Ga0070670_100000943 3300005331 Bacteria 22839
9 Ga0070670_100005046 3300005331 Bacteria 11107
10 Ga0070670_100021347 3300005331 Bacteria 5571
11 Ga0070670_100147456 3300005331 Bacteria 2036
12 Ga0070682_100024233 3300005337 Bacteria 3610
13 Ga0070660_100010883 3300005339 Bacteria 6438
14 Ga0070660_100039108 3300005339 Bacteria 3604
15 Ga0070660_100092005 3300005339 Bacteria 2393
16 Ga0070660_100098752 3300005339 Bacteria 2311
17 Ga0070660_100173501 3300005339 Bacteria 1742
18 Ga0070691_10001627 3300005341 Bacteria 9737
19 Ga0070661_100026280 3300005344 Bacteria 4186
20 Ga0070661_100047288 3300005344 Bacteria 3148
21 Ga0070661_100120157 3300005344 Bacteria 1968
22 Ga0070692_10015545 3300005345 Bacteria 3601
23 Ga0070671_100003131 3300005355 Bacteria 12885
24 Ga0070671_100005083 3300005355 Bacteria 10477
25 Ga0070671_100022432 3300005355 Bacteria 5155
26 Ga0070671_100079582 3300005355 Bacteria 2740
27 Ga0070674_100031382 3300005356 Bacteria 3520
28 Ga0070659_100022442 3300005366 Bacteria 4818
29 Ga0070659_100059645 3300005366 Bacteria 3012
30 Ga0070659_100101399 3300005366 Bacteria 2317
31 Ga0070659_100133046 3300005366 Bacteria 2021
32 Ga0070667_100023294 3300005367 Bacteria 5136
33 Ga0070667_100068093 3300005367 Bacteria 3029
34 Ga0070714_100100269 3300005435 Bacteria 2550
35 Ga0070714_100110949 3300005435 Bacteria 2428
36 Ga0070678_100232125 3300005456 Bacteria 1539
37 Ga0070679_100039412 3300005530 Bacteria 4695
38 Ga0070679_100089947 3300005530 Bacteria 3057
39 Ga0070684_100059680 3300005535 Bacteria 3335
40 Ga0068853_100015888 3300005539 Bacteria 6184
41 Ga0070665_100053508 3300005548 Bacteria 4048
42 Ga0068855_100114952 3300005563 Bacteria 3085
43 Ga0068855_100281552 3300005563 Bacteria 1846
44 Ga0068857_100000325 3300005577 Bacteria 32762
45 Ga0068857_100132046 3300005577 Bacteria 2252
46 Ga0068854_100080157 3300005578 Bacteria 2408
47 Ga0068854_100080426 3300005578 Bacteria 2405
48 Ga0068856_100089675 3300005614 Bacteria 3057
49 Ga0068856_100091112 3300005614 Bacteria 3033
50 Ga0068852_100001024 3300005616 Bacteria 18445
51 Ga0068852_100022510 3300005616 Bacteria 5055
52 Ga0068864_100000768 3300005618 Bacteria 26958
53 Ga0068864_100012151 3300005618 Bacteria 7116
54 Ga0068863_100022025 3300005841 Bacteria 6083
55 Ga0068863_100150492 3300005841 Bacteria 2227
56 Ga0068860_100120364 3300005843 Bacteria 2514
57 Ga0070717_10005365 3300006028 Bacteria 9349
58 Ga0105240_10006013 3300009093 Bacteria 17942
59 Ga0105240_10206575 3300009093 Bacteria 2298
60 Ga0105240_10344248 3300009093 Bacteria 1693
61 Ga0105248_10001721 3300009177 Bacteria 24322
62 Ga0105248_10140523 3300009177 Bacteria 2724
63 Ga0157373_10074622 3300013100 Bacteria 2393
64 Ga0157371_10021968 3300013102 Bacteria 4683
65 Ga0157371_10066431 3300013102 Bacteria 2553
66 Ga0157371_10076938 3300013102 Bacteria 2363
67 Ga0157370_10003139 3300013104 Bacteria 19568
68 Ga0157370_10085571 3300013104 Bacteria 2962
69 Ga0157369_10017855 3300013105 Bacteria 7963
70 Ga0157369_10038034 3300013105 Bacteria 5264
71 Ga0157369_10071260 3300013105 Bacteria 3731
72 Ga0157369_10225346 3300013105 Bacteria 1961
73 Ga0163162_10321119 3300013306 Bacteria 1681
74 Ga0157372_10138070 3300013307 Bacteria 2808
75 Ga0157380_10267155 3300014326 Bacteria 1557
76 Ga0213875_10001801 3300021388 Bacteria 13365
77 Ga0207705_10000060 3300025909 Bacteria 152576
78 Ga0207705_10010678 3300025909 Bacteria 6668
79 Ga0207705_10013641 3300025909 Bacteria 5863
80 Ga0207705_10029917 3300025909 Bacteria 3884
81 Ga0207705_10037453 3300025909 Bacteria 3471
82 Ga0207705_10040748 3300025909 Bacteria 3332
83 Ga0207705_10047337 3300025909 Bacteria 3092
84 Ga0207705_10072125 3300025909 Bacteria 2504
85 Ga0207705_10103098 3300025909 Bacteria 2101
86 Ga0207707_10188827 3300025912 Bacteria 1798
87 Ga0207695_10001996 3300025913 Bacteria 31509
88 Ga0207695_10026806 3300025913 Bacteria 6427
89 Ga0207660_10098930 3300025917 Bacteria 2176
90 Ga0207660_10142409 3300025917 Bacteria 1834
91 Ga0207657_10000631 3300025919 Bacteria 37345
92 Ga0207657_10018264 3300025919 Bacteria 6705
93 Ga0207657_10144867 3300025919 Bacteria 1938
94 Ga0207649_10010537 3300025920 Bacteria 5082
95 Ga0207649_10063515 3300025920 Bacteria 2331
96 Ga0207652_10062016 3300025921 Bacteria 3230
97 Ga0207650_10096637 3300025925 Bacteria 2266
98 Ga0207659_10144613 3300025926 Bacteria 1850
99 Ga0207664_10012303 3300025929 Bacteria 6114
100 Ga0207664_10120814 3300025929 Bacteria 2192
101 Ga0207664_10138855 3300025929 Bacteria 2053
102 Ga0207644_10000664 3300025931 Bacteria 21695
103 Ga0207690_10003116 3300025932 Bacteria 9987
104 Ga0207690_10076921 3300025932 Bacteria 2318
105 Ga0207690_10085514 3300025932 Bacteria 2214
106 Ga0207706_10014531 3300025933 Bacteria 7136
107 Ga0207706_10022505 3300025933 Bacteria 5656
108 Ga0207711_10002775 3300025941 Bacteria 15413
109 Ga0207711_10034477 3300025941 Bacteria 4286
110 Ga0207679_10002922 3300025945 Bacteria 10586
111 Ga0207667_10019361 3300025949 Bacteria 7601
112 Ga0207667_10102445 3300025949 Bacteria 2953
113 Ga0207667_10215121 3300025949 Bacteria 1969
114 Ga0207667_10230496 3300025949 Bacteria 1897
115 Ga0207667_10250838 3300025949 Bacteria 1810
116 Ga0207640_10002387 3300025981 Bacteria 10045
117 Ga0207640_10067298 3300025981 Bacteria 2396
118 Ga0207640_10149547 3300025981 Bacteria 1714
119 Ga0207640_10151865 3300025981 Bacteria 1702
120 Ga0207658_10006830 3300025986 Bacteria 7778
121 Ga0207639_10014254 3300026041 Bacteria 5584
122 Ga0207678_10059113 3300026067 Bacteria 3298
123 Ga0207678_10071925 3300026067 Bacteria 2964
124 Ga0207702_10006478 3300026078 Bacteria 10096
125 Ga0207702_10036080 3300026078 Bacteria 4135
126 Ga0207702_10083941 3300026078 Bacteria 2772
127 Ga0207702_10094137 3300026078 Bacteria 2629
128 Ga0207641_10049621 3300026088 Bacteria 3547
129 Ga0207674_10000567 3300026116 Bacteria 48417
130 Ga0207674_10014781 3300026116 Bacteria 8609
131 Ga0207674_10031252 3300026116 Bacteria 5594
132 Ga0207683_10003531 3300026121 Bacteria 13640
133 Ga0207698_10000407 3300026142 Bacteria 24874
134 Ga0207698_10031594 3300026142 Bacteria 3824
135 Ga0207698_10050279 3300026142 Bacteria 3179
136 Ga0307405_10046136 3300031731 Bacteria 2675
137 Ga0307413_10045736 3300031824 Bacteria 2597
138 Ga0307413_10156781 3300031824 Bacteria 1594
139 Ga0307410_10022145 3300031852 Bacteria 3922
140 Ga0307410_10036545 3300031852 Bacteria 3199
141 Ga0307409_100024684 3300031995 Bacteria 4198
142 Ga0307409_100061949 3300031995 Bacteria 2926
143 Ga0307415_100005245 3300032126 Bacteria 6858
144 Ga0373955_0008993 3300035172 Bacteria 4663
145 Ga0373935_0005630 3300035692 Bacteria 7395
146 Ga0373933_0065952 3300035724 Bacteria 2193
147 Ga0373937_0105511 3300036401 Bacteria 2618
148 Ga0395899_0000112 3300037312 Bacteria 138389
149 Ga0395899_0000416 3300037312 Bacteria 49361
150 Ga0395899_0002666 3300037312 Bacteria 14397
151 Ga0395899_0004766 3300037312 Bacteria 10579
152 Ga0395899_0017103 3300037312 Bacteria 5524
153 Ga0395899_0027465 3300037312 Bacteria 4291
154 Ga0395899_0040131 3300037312 Bacteria 3501
155 Ga0395899_0146306 3300037312 Bacteria 1678
156 Ga0395899_0148051 3300037312 Bacteria 1665
157 Ga0395900_0000126 3300037418 Bacteria 127586
158 Ga0395900_0000969 3300037418 Bacteria 37329
159 Ga0395900_0004517 3300037418 Bacteria 14723
160 Ga0395900_0010855 3300037418 Bacteria 9316
161 Ga0395900_0035070 3300037418 Bacteria 5167
162 Ga0395900_0037243 3300037418 Bacteria 5017
163 Ga0395900_0043071 3300037418 Bacteria 4651
164 Ga0395900_0049244 3300037418 Bacteria 4340
165 Ga0395900_0133585 3300037418 Bacteria 2542
166 Ga0395900_0238007 3300037418 Bacteria 1827
167 Ga0395900_0403826 3300037418 Bacteria 1330
168 Ga0395898_0000192 3300037466 Bacteria 156121
169 Ga0395898_0003221 3300037466 Bacteria 18362
170 Ga0395898_0019865 3300037466 Bacteria 6832
171 Ga0395898_0025209 3300037466 Bacteria 5995
172 Ga0395898_0081635 3300037466 Bacteria 3117
173 Ga0395898_0161728 3300037466 Bacteria 2141
174 Ga0395905_0000066 3300037471 Bacteria 183121
175 Ga0395905_0011211 3300037471 Bacteria 8667
176 Ga0395905_0038956 3300037471 Bacteria 4459
177 Ga0395905_0049566 3300037471 Bacteria 3935
178 Ga0395905_0050500 3300037471 Bacteria 3896
179 Ga0395905_0061153 3300037471 Bacteria 3522
180 Ga0395905_0063951 3300037471 Bacteria 3442
181 Ga0395905_0141460 3300037471 Bacteria 2263
182 Ga0395905_0166499 3300037471 Bacteria 2071
183 Ga0395905_0173494 3300037471 Bacteria 2025
184 Ga0395905_0215952 3300037471 Bacteria 1796
185 Ga0436364_0179247 3300037853 Bacteria 13402
186 Ga0395901_0000203 3300038443 Bacteria 74605
187 Ga0395901_0000249 3300038443 Bacteria 66993
188 Ga0395901_0000732 3300038443 Bacteria 37201
189 Ga0395901_0005045 3300038443 Bacteria 13333
190 Ga0395901_0043249 3300038443 Bacteria 4673
191 Ga0395901_0047711 3300038443 Bacteria 4446
192 Ga0395901_0055011 3300038443 Bacteria 4137
193 Ga0395901_0137102 3300038443 Bacteria 2571
194 Ga0395901_0227653 3300038443 Bacteria 1947
195 Ga0395901_0308256 3300038443 Bacteria 1640
196 Ga0466969_0005224 3300044656 Bacteria 6910
197 Ga0466965_0031754 3300044683 Bacteria 2576
198 Ga0466966_0001204 3300044684 Bacteria 16598
199 Ga0466966_0005236 3300044684 Bacteria 8527
200 Ga0466961_0006800 3300044693 Bacteria 7279
201 Ga0466961_0084949 3300044693 Bacteria 2002
202 Ga0466961_0100014 3300044693 Bacteria 1827
203 Ga0466963_0004342 3300044694 Bacteria 8226
204 Ga0466963_0027776 3300044694 Bacteria 3627
205 Ga0466963_0055079 3300044694 Bacteria 2644
206 Ga0466963_0062647 3300044694 Bacteria 2487
207 Ga0466964_0025584 3300044706 Bacteria 2305
208 Ga0466971_0072383 3300044719 Bacteria 1566
209 Ga0466970_0015084 3300044765 Bacteria 3974
210 Ga0466970_0052451 3300044765 Bacteria 2177
211 Ga0466957_0002069 3300044842 Bacteria 10735
212 Ga0466957_0007907 3300044842 Bacteria 6031
213 Ga0466959_0134729 3300045049 Bacteria 1749
214 Ga0466959_0144181 3300045049 Bacteria 1681
215 Ga0451576_0019607 3300045051 Bacteria 7380
216 Ga0466958_0000384 3300045836 Bacteria 17986
217 Ga0466958_0000709 3300045836 Bacteria 14546
218 Ga0466958_0004090 3300045836 Bacteria 7659
219 Ga0466958_0090198 3300045836 Bacteria 1896
220 Ga0466967_0000096 3300045976 Bacteria 31385
221 Ga0466967_0015324 3300045976 Bacteria 6005
222 Ga0466967_0044781 3300045976 Bacteria 3841
223 Ga0466967_0070617 3300045976 Bacteria 3124
224 Ga0495621_0015836 3300046539 Bacteria 2411
225 Ga0495668_0008229 3300046616 Bacteria 6540
226 Ga0495668_0029873 3300046616 Bacteria 3079
227 Ga0495625_0082078 3300046660 Bacteria 2243
228 Ga0495669_0000413 3300046684 Bacteria 20774
229 Ga0495669_0001408 3300046684 Bacteria 9894
230 Ga0495669_0009849 3300046684 Bacteria 4037
231 Ga0495677_0003293 3300047445 Bacteria 6294
232 Ga0495602_0058805 3300048088 Bacteria 3362
233 Ga0496104_0079687 3300048907 Bacteria 3122
234 Ga0496108_0057952 3300048911 Bacteria 3254
235 Ga0496108_0107410 3300048911 Bacteria 2383
236 Ga0496109_0115988 3300048912 Bacteria 2492
237 Ga0496110_0024363 3300048913 Bacteria 5157
238 Ga0496110_0069430 3300048913 Bacteria 3120
239 Ga0496111_0014596 3300048914 Bacteria 5372
240 Ga0496111_0067208 3300048914 Bacteria 2604
241 Ga0496111_0103767 3300048914 Bacteria 2091
242 Ga0496112_0002151 3300048915 Bacteria 15652
243 Ga0496112_0023016 3300048915 Bacteria 5945
244 Ga0496112_0051103 3300048915 Bacteria 4054
245 Ga0496114_0000006 3300048917 Bacteria 472921
246 Ga0496114_0130310 3300048917 Bacteria 2171
247 Ga0496115_0001655 3300048918 Bacteria 16029
248 Ga0501070_0047756 3300049586 Bacteria 3557
249 Ga0501080_0054943 3300049742 Bacteria 3708
250 Ga0501268_005869 3300049765 Bacteria 1779
251 Ga0500658_0000208 3300053134 Bacteria 27756
252 Ga0466962_0011352 3300061719 Bacteria 4290
253 2896429813 2896429255 Bacteria 2557483
254 Ga0070660_100040469
255 JGI24737J22298_10000319
256 JGI24735J21928_10015136
257 Ga0070658_10000379
258 Ga0070658_10003567
259 Ga0070658_10139645
260 Ga0070676_10097035
261 Ga0070670_100000943
262 Ga0070670_100005046
263 Ga0070670_100021347
264 Ga0070670_100147456
265 Ga0070682_100024233
266 Ga0070660_100010883
267 Ga0070660_100039108
268 Ga0070660_100092005
269 Ga0070660_100098752
270 Ga0070660_100173501
271 Ga0070691_10001627
272 Ga0070661_100026280
273 Ga0070661_100047288
274 Ga0070661_100120157
275 Ga0070692_10015545
276 Ga0070671_100003131
277 Ga0070671_100005083
278 Ga0070671_100022432
279 Ga0070671_100079582
280 Ga0070674_100031382
281 Ga0070659_100022442
282 Ga0070659_100059645
283 Ga0070659_100101399
284 Ga0070659_100133046
285 Ga0070667_100023294
286 Ga0070667_100068093
287 Ga0070714_100100269
288 Ga0070714_100110949
289 Ga0070678_100232125
290 Ga0070679_100039412
291 Ga0070679_100089947
292 Ga0070684_100059680
293 Ga0068853_100015888
294 Ga0070665_100053508
295 Ga0068855_100114952
296 Ga0068855_100281552
297 Ga0068857_100000325
298 Ga0068857_100132046
299 Ga0068854_100080157
300 Ga0068854_100080426
301 Ga0068856_100089675
302 Ga0068856_100091112
303 Ga0068852_100001024
304 Ga0068852_100022510
305 Ga0068864_100000768
306 Ga0068864_100012151
307 Ga0068863_100022025
308 Ga0068863_100150492
309 Ga0068860_100120364
310 Ga0070717_10005365
311 Ga0105240_10006013
312 Ga0105240_10206575
313 Ga0105240_10344248
314 Ga0105248_10001721
315 Ga0105248_10140523
316 Ga0157373_10074622
317 Ga0157371_10021968
318 Ga0157371_10066431
319 Ga0157371_10076938
320 Ga0157370_10003139
321 Ga0157370_10085571
322 Ga0157369_10017855
323 Ga0157369_10038034
324 Ga0157369_10071260
325 Ga0157369_10225346
326 Ga0163162_10321119
327 Ga0157372_10138070
328 Ga0157380_10267155
329 Ga0213875_10001801
330 Ga0207705_10000060
331 Ga0207705_10010678
332 Ga0207705_10013641
333 Ga0207705_10029917
334 Ga0207705_10037453
335 Ga0207705_10040748
336 Ga0207705_10047337
337 Ga0207705_10072125
338 Ga0207705_10103098
339 Ga0207707_10188827
340 Ga0207695_10001996
341 Ga0207695_10026806
342 Ga0207660_10098930
343 Ga0207660_10142409
344 Ga0207657_10000631
345 Ga0207657_10018264
346 Ga0207657_10144867
347 Ga0207649_10010537
348 Ga0207649_10063515
349 Ga0207652_10062016
350 Ga0207650_10096637
351 Ga0207659_10144613
352 Ga0207664_10012303
353 Ga0207664_10120814
354 Ga0207664_10138855
355 Ga0207644_10000664
356 Ga0207690_10003116
357 Ga0207690_10076921
358 Ga0207690_10085514
359 Ga0207706_10014531
360 Ga0207706_10022505
361 Ga0207711_10002775
362 Ga0207711_10034477
363 Ga0207679_10002922
364 Ga0207667_10019361
365 Ga0207667_10102445
366 Ga0207667_10215121
367 Ga0207667_10230496
368 Ga0207667_10250838
369 Ga0207640_10002387
370 Ga0207640_10067298
371 Ga0207640_10149547
372 Ga0207640_10151865
373 Ga0207658_10006830
374 Ga0207639_10014254
375 Ga0207678_10059113
376 Ga0207678_10071925
377 Ga0207702_10006478
378 Ga0207702_10036080
379 Ga0207702_10083941
380 Ga0207702_10094137
381 Ga0207641_10049621
382 Ga0207674_10000567
383 Ga0207674_10014781
384 Ga0207674_10031252
385 Ga0207683_10003531
386 Ga0207698_10000407
387 Ga0207698_10031594
388 Ga0207698_10050279
389 Ga0307405_10046136
390 Ga0307413_10045736
391 Ga0307413_10156781
392 Ga0307410_10022145
393 Ga0307410_10036545
394 Ga0307409_100024684
395 Ga0307409_100061949
396 Ga0307415_100005245
397 Ga0373955_0008993
398 Ga0373935_0005630
399 Ga0373933_0065952
400 Ga0373937_0105511
401 Ga0395899_0000112
402 Ga0395899_0000416
403 Ga0395899_0002666
404 Ga0395899_0004766
405 Ga0395899_0017103
406 Ga0395899_0027465
407 Ga0395899_0040131
408 Ga0395899_0146306
409 Ga0395899_0148051
410 Ga0395900_0000126
411 Ga0395900_0000969
412 Ga0395900_0004517
413 Ga0395900_0010855
414 Ga0395900_0035070
415 Ga0395900_0037243
416 Ga0395900_0043071
417 Ga0395900_0049244
418 Ga0395900_0133585
419 Ga0395900_0238007
420 Ga0395900_0403826
421 Ga0395898_0000192
422 Ga0395898_0003221
423 Ga0395898_0019865
424 Ga0395898_0025209
425 Ga0395898_0081635
426 Ga0395898_0161728
427 Ga0395905_0000066
428 Ga0395905_0011211
429 Ga0395905_0038956
430 Ga0395905_0049566
431 Ga0395905_0050500
432 Ga0395905_0061153
433 Ga0395905_0063951
434 Ga0395905_0141460
435 Ga0395905_0166499
436 Ga0395905_0173494
437 Ga0395905_0215952
438 Ga0436364_0179247
439 Ga0395901_0000203
440 Ga0395901_0000249
441 Ga0395901_0000732
442 Ga0395901_0005045
443 Ga0395901_0043249
444 Ga0395901_0047711
445 Ga0395901_0055011
446 Ga0395901_0137102
447 Ga0395901_0227653
448 Ga0395901_0308256
449 Ga0466969_0005224
450 Ga0466965_0031754
451 Ga0466966_0001204
452 Ga0466966_0005236
453 Ga0466961_0006800
454 Ga0466961_0084949
455 Ga0466961_0100014
456 Ga0466963_0004342
457 Ga0466963_0027776
458 Ga0466963_0055079
459 Ga0466963_0062647
460 Ga0466964_0025584
461 Ga0466971_0072383
462 Ga0466970_0015084
463 Ga0466970_0052451
464 Ga0466957_0002069
465 Ga0466957_0007907
466 Ga0466959_0134729
467 Ga0466959_0144181
468 Ga0451576_0019607
469 Ga0466958_0000384
470 Ga0466958_0000709
471 Ga0466958_0004090
472 Ga0466958_0090198
473 Ga0466967_0000096
474 Ga0466967_0015324
475 Ga0466967_0044781
476 Ga0466967_0070617
477 Ga0495621_0015836
478 Ga0495668_0008229
479 Ga0495668_0029873
480 Ga0495625_0082078
481 Ga0495669_0000413
482 Ga0495669_0001408
483 Ga0495669_0009849
484 Ga0495677_0003293
485 Ga0495602_0058805
486 Ga0496104_0079687
487 Ga0496108_0057952
488 Ga0496108_0107410
489 Ga0496109_0115988
490 Ga0496110_0024363
491 Ga0496110_0069430
492 Ga0496111_0014596
493 Ga0496111_0067208
494 Ga0496111_0103767
495 Ga0496112_0002151
496 Ga0496112_0023016
497 Ga0496112_0051103
498 Ga0496114_0000006
499 Ga0496114_0130310
500 Ga0496115_0001655
501 Ga0501070_0047756
502 Ga0501080_0054943
503 Ga0501268_005869
504 Ga0500658_0000208
505 Ga0466962_0011352
506 2896429813

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01406

tRNA-synt_1e

tRNA synthetases class I (C) catalytic domain

14

318

0.96

PF23493

388

434

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1u0b-assembly1.cif.gz_B crystal structure of cysteinyl-trna synthetase binary complex with trnacys 0.8994 1 435
1u0b-assembly1.cif.gz_B crystal structure of cysteinyl-trna synthetase binary complex with trnacys 0.8975 1 435
1li7-assembly1.cif.gz_A crystal structure of cysteinyl-trna synthetase with cysteine substrate bound 0.8791 1 380
1li7-assembly2.cif.gz_B crystal structure of cysteinyl-trna synthetase with cysteine substrate bound 0.8726 1 380
1li5-assembly2.cif.gz_B crystal structure of cysteinyl-trna synthetase 0.8691 1 380
ID Description Score Start End Superfamily
3sp1A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9348 1 308 3.40.50.620
3sp1A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9315 1 308 3.40.50.620
af_Q2G2M6_1_304_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9307 1 308 3.40.50.620
af_Q2G2M6_1_304_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9278 1 308 3.40.50.620
af_C0PHQ1_15_336_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9222 2 308 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A2D3W6N6-F1-model_v4 Cysteine--tRNA ligase 0.9411 2 156 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-A0A2E6GAX5-F1-model_v4 Cysteine--tRNA ligase 0.9393 2 145 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-A0A7V3U4I7-F1-model_v4 Cysteine--tRNA ligase (EC 6.1.1.16) 0.9386 2 367 GO:0004817
GO:0005524
GO:0005829
GO:0006423
GO:0046872
AF-A0A7V2SJM3-F1-model_v4 Cysteine--tRNA ligase 0.9369 1 166 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-A0A849GYU2-F1-model_v4 Cysteine--tRNA ligase 0.9357 2 213 GO:0004817
GO:0005524
GO:0005829
GO:0006423

Map