F363745

General Info

Members Datasets Scaffolds Average Seq Length
253 149 253 336

Family's Representative Sequence

Representative Sequence 3300005295|Ga0065707_10109544|Ga0065707_101095442
Length 367
Sequence VIAESSSGLYCEAGGFHIDPWLPVERALVTHAHSDHASPGSRHYLSAEPARVVMQRRLPDAAIETLPYGAATRIGEVTVSFHPAGHILGSAQIRVEHRGEVWVVSGDYKRAADPTCAPFEPVRCHTFITEATFGLPIYTWDAPVTVVDEIVEWWQENRSAGHPSVLFCYVLGKAQRILAELTGRADGPIHLHGAMCALTDAYRDAGVAMAPAERITESMRGKALARSLVLAPLSARGTVWMRRLPNASHAFASGLMRVRGVRRQRAFDRGFVLSDHADWPALLATIAETGASRVLVTHGWSDALARYLSETRGLETGTIRTQYEGEIGELREAAEATPDAVKEGSEEESPEQPRNAPPASHLAPRVK

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
61 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
62 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
93 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
94 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
95 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
96 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
99 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
100 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
107 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
108 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
112 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
123 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
124 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
125 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
126 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
129 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
130 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
132 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
133 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
134 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
135 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
136 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
139 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
140 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
143 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
144 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
145 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
146 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
147 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
148 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
149 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.67
Nodule 0
Rhizoplane 3.16
Rhizosphere 86.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10182695 3300005290 Bacteria 1184
2 Ga0065707_10109544 3300005295 Bacteria 2459
3 Ga0070676_10083276 3300005328 Bacteria 1945
4 Ga0070683_100079518 3300005329 Bacteria 3068
5 Ga0070670_100008089 3300005331 Bacteria 8944
6 Ga0070670_100044984 3300005331 Bacteria 3795
7 Ga0070670_100171165 3300005331 Bacteria 1884
8 Ga0070677_10004986 3300005333 Bacteria 4359
9 Ga0070680_100022161 3300005336 Bacteria 5054
10 Ga0070660_100035955 3300005339 Bacteria 3750
11 Ga0070692_10136546 3300005345 Bacteria 1384
12 Ga0070669_100016320 3300005353 Bacteria 5298
13 Ga0070669_100029141 3300005353 Bacteria 3978
14 Ga0070675_100003967 3300005354 Bacteria 11226
15 Ga0070675_100039870 3300005354 Bacteria 3834
16 Ga0070675_100095877 3300005354 Bacteria 2492
17 Ga0070675_100104969 3300005354 Bacteria 2384
18 Ga0070671_100051424 3300005355 Bacteria 3427
19 Ga0070671_100131201 3300005355 Bacteria 2111
20 Ga0070671_100280391 3300005355 Bacteria 1417
21 Ga0070673_100063419 3300005364 Bacteria 2940
22 Ga0070673_100070143 3300005364 Bacteria 2811
23 Ga0070673_100146080 3300005364 Bacteria 1999
24 Ga0070673_100234523 3300005364 Bacteria 1593
25 Ga0070659_100159203 3300005366 Bacteria 1845
26 Ga0070713_100042822 3300005436 Bacteria 3698
27 Ga0070663_100012149 3300005455 Bacteria 5436
28 Ga0070678_100039521 3300005456 Bacteria 3330
29 Ga0070678_100148211 3300005456 Bacteria 1887
30 Ga0070678_100207865 3300005456 Bacteria 1620
31 Ga0070662_100164904 3300005457 Bacteria 1736
32 Ga0068867_100056068 3300005459 Bacteria 2915
33 Ga0068867_100136132 3300005459 Bacteria 1915
34 Ga0070698_100199127 3300005471 Bacteria 1939
35 Ga0070684_100247237 3300005535 Bacteria 1630
36 Ga0070672_100006000 3300005543 Bacteria 8109
37 Ga0070672_100012609 3300005543 Bacteria 5943
38 Ga0070672_100024715 3300005543 Bacteria 4445
39 Ga0070672_100163701 3300005543 Bacteria 1847
40 Ga0070696_100144295 3300005546 Bacteria 1743
41 Ga0070696_100236878 3300005546 Bacteria 1375
42 Ga0070693_100056611 3300005547 Bacteria 2263
43 Ga0070665_100122569 3300005548 Bacteria 2601
44 Ga0070664_100064500 3300005564 Bacteria 3124
45 Ga0068857_100232909 3300005577 Bacteria 1685
46 Ga0068857_100441854 3300005577 Bacteria 1215
47 Ga0068852_100096200 3300005616 Bacteria 2661
48 Ga0068859_100120084 3300005617 Bacteria 2695
49 Ga0068859_100127136 3300005617 Bacteria 2618
50 Ga0068866_10021626 3300005718 Bacteria 2966
51 Ga0068870_10238223 3300005840 Bacteria 1122
52 Ga0068863_100180560 3300005841 Bacteria 2026
53 Ga0068860_100020233 3300005843 Bacteria 6449
54 Ga0068860_100448985 3300005843 Bacteria 1282
55 Ga0068862_100075403 3300005844 Bacteria 2917
56 Ga0068862_100333780 3300005844 Bacteria 1403
57 Ga0070717_10010205 3300006028 Bacteria 7074
58 Ga0070717_10515722 3300006028 Unclassified 1081
59 Ga0075368_10004666 3300006042 Bacteria 4662
60 Ga0075364_10001239 3300006051 Bacteria 13691
61 Ga0075364_10024447 3300006051 Bacteria 3837
62 Ga0075364_10045914 3300006051 Bacteria 2843
63 Ga0075362_10000731 3300006177 Bacteria 9724
64 Ga0075367_10029189 3300006178 Bacteria 3153
65 Ga0075367_10030501 3300006178 Bacteria 3092
66 Ga0075367_10107223 3300006178 Bacteria 1712
67 Ga0075366_10004523 3300006195 Bacteria 7463
68 Ga0075366_10004576 3300006195 Bacteria 7430
69 Ga0075366_10004947 3300006195 Bacteria 7190
70 Ga0075366_10064676 3300006195 Bacteria 2175
71 Ga0075366_10154315 3300006195 Bacteria 1391
72 Ga0075370_10005975 3300006353 Bacteria 6093
73 Ga0075370_10053361 3300006353 Bacteria 2294
74 Ga0075428_100002973 3300006844 Bacteria 18472
75 Ga0075428_100020982 3300006844 Bacteria 7236
76 Ga0075428_100432408 3300006844 Bacteria 1410
77 Ga0075430_100005077 3300006846 Bacteria 11078
78 Ga0075430_100203754 3300006846 Bacteria 1642
79 Ga0075431_100010504 3300006847 Bacteria 9309
80 Ga0075431_100101901 3300006847 Bacteria 2963
81 Ga0075431_100120108 3300006847 Bacteria 2712
82 Ga0075431_100216999 3300006847 Bacteria 1952
83 Ga0075433_10058114 3300006852 Bacteria 3382
84 Ga0075434_100351435 3300006871 Bacteria 1495
85 Ga0075429_100007972 3300006880 Bacteria 9199
86 Ga0075429_100021259 3300006880 Bacteria 5625
87 Ga0068865_100292318 3300006881 Bacteria 1301
88 Ga0097620_100120085 3300006931 Bacteria 2695
89 Ga0097620_100127136 3300006931 Bacteria 2618
90 Ga0075435_100004190 3300007076 Bacteria 9889
91 Ga0075435_100361505 3300007076 Bacteria 1245
92 Ga0111539_10006457 3300009094 Bacteria 15105
93 Ga0111539_10009435 3300009094 Bacteria 12313
94 Ga0114129_10004414 3300009147 Bacteria 19851
95 Ga0114129_10006604 3300009147 Bacteria 16465
96 Ga0114129_10006643 3300009147 Bacteria 16424
97 Ga0114129_10039279 3300009147 Bacteria 6673
98 Ga0114129_10052831 3300009147 Bacteria 5702
99 Ga0114129_10151089 3300009147 Bacteria 3178
100 Ga0105243_10038919 3300009148 Bacteria 3705
101 Ga0105248_10141401 3300009177 Bacteria 2715
102 Ga0105238_10027139 3300009551 Bacteria 5836
103 Ga0105249_10000720 3300009553 Bacteria 30109
104 Ga0105249_10288707 3300009553 Bacteria 1641
105 Ga0105249_10361265 3300009553 Bacteria 1474
106 Ga0105246_10168053 3300011119 Bacteria 1677
107 Ga0163163_10034268 3300014325 Bacteria 4915
108 Ga0157380_10000791 3300014326 Bacteria 19859
109 Ga0157380_10041046 3300014326 Bacteria 3609
110 Ga0182008_10111656 3300014497 Bacteria 1354
111 Ga0157377_10053455 3300014745 Bacteria 2284
112 Ga0207697_10001806 3300025315 Bacteria 11469
113 Ga0207682_10006769 3300025893 Bacteria 4600
114 Ga0207688_10003534 3300025901 Bacteria 8526
115 Ga0207688_10051257 3300025901 Bacteria 2312
116 Ga0207688_10075884 3300025901 Bacteria 1914
117 Ga0207643_10221538 3300025908 Bacteria 1158
118 Ga0207662_10005333 3300025918 Bacteria 6842
119 Ga0207657_10012775 3300025919 Bacteria 8268
120 Ga0207657_10150112 3300025919 Bacteria 1899
121 Ga0207649_10235743 3300025920 Bacteria 1311
122 Ga0207681_10001584 3300025923 Bacteria 14647
123 Ga0207694_10041968 3300025924 Bacteria 3527
124 Ga0207650_10003456 3300025925 Bacteria 10855
125 Ga0207650_10072757 3300025925 Bacteria 2588
126 Ga0207659_10000982 3300025926 Bacteria 16999
127 Ga0207659_10050121 3300025926 Bacteria 2964
128 Ga0207659_10051006 3300025926 Bacteria 2941
129 Ga0207659_10070107 3300025926 Bacteria 2556
130 Ga0207659_10106624 3300025926 Bacteria 2122
131 Ga0207659_10379988 3300025926 Bacteria 1178
132 Ga0207644_10014271 3300025931 Bacteria 5314
133 Ga0207644_10077923 3300025931 Bacteria 2442
134 Ga0207644_10209080 3300025931 Bacteria 1542
135 Ga0207706_10067387 3300025933 Bacteria 3149
136 Ga0207669_10019539 3300025937 Bacteria 3530
137 Ga0207704_10247938 3300025938 Bacteria 1335
138 Ga0207691_10015563 3300025940 Bacteria 7231
139 Ga0207691_10205579 3300025940 Bacteria 1712
140 Ga0207689_10070132 3300025942 Bacteria 2879
141 Ga0207661_10022067 3300025944 Bacteria 4786
142 Ga0207679_10134568 3300025945 Bacteria 1988
143 Ga0207651_10042260 3300025960 Bacteria 3032
144 Ga0207651_10220943 3300025960 Bacteria 1531
145 Ga0207651_10312267 3300025960 Bacteria 1311
146 Ga0207678_10041205 3300026067 Bacteria 4004
147 Ga0207678_10060573 3300026067 Bacteria 3256
148 Ga0207678_10106439 3300026067 Bacteria 2393
149 Ga0207708_10005407 3300026075 Bacteria 9410
150 Ga0207648_10036891 3300026089 Bacteria 4306
151 Ga0207648_10126432 3300026089 Bacteria 2249
152 Ga0207674_10250407 3300026116 Bacteria 1719
153 Ga0207674_10538435 3300026116 Bacteria 1128
154 Ga0207675_100073552 3300026118 Bacteria 3198
155 Ga0207675_100260155 3300026118 Bacteria 1681
156 Ga0207675_100426886 3300026118 Bacteria 1310
157 Ga0207683_10024640 3300026121 Bacteria 5183
158 Ga0207698_10151234 3300026142 Bacteria 2015
159 Ga0207428_10021760 3300027907 Bacteria 5424
160 Ga0207428_10040662 3300027907 Bacteria 3769
161 Ga0268266_10372309 3300028379 Bacteria 1345
162 Ga0268264_10116303 3300028381 Bacteria 2350
163 Ga0307408_100049324 3300031548 Bacteria 3023
164 Ga0307408_100092052 3300031548 Bacteria 2291
165 Ga0307410_10206259 3300031852 Bacteria 1504
166 Ga0307406_10013506 3300031901 Bacteria 4679
167 Ga0307407_10093117 3300031903 Bacteria 1852
168 Ga0307412_10056667 3300031911 Bacteria 2613
169 Ga0307416_100331945 3300032002 Unclassified 1529
170 Ga0307416_100484754 3300032002 Bacteria 1297
171 Ga0307411_10006439 3300032005 Bacteria 5876
172 Ga0307411_10045539 3300032005 Bacteria 2822
173 Ga0307411_10099653 3300032005 Bacteria 2051
174 Ga0307415_100126307 3300032126 Bacteria 1928
175 Ga0307415_100180715 3300032126 Bacteria 1655
176 Ga0373951_0023369 3300035091 Bacteria 1428
177 Ga0373931_0055409 3300035691 Bacteria 2122
178 Ga0373947_0045578 3300035725 Bacteria 2624
179 Ga0373947_0255343 3300035725 Bacteria 1160
180 Ga0373937_0001053 3300036401 Bacteria 23283
181 Ga0373925_0003723 3300037068 Bacteria 11706
182 Ga0395905_0273756 3300037471 Bacteria 1574
183 Ga0395905_0537360 3300037471 Bacteria 1070
184 Ga0439450_002620 3300042008 Bacteria 2853
185 Ga0439435_0019190 3300042436 Bacteria 1749
186 Ga0439464_0000821 3300042439 Bacteria 6851
187 Ga0451576_0381576 3300045051 Bacteria 1477
188 Ga0495658_0068834 3300046683 Bacteria 2050
189 Ga0496104_0248686 3300048907 Bacteria 1691
190 Ga0496107_0098773 3300048910 Bacteria 2139
191 Ga0496109_0088133 3300048912 Bacteria 2868
192 Ga0496109_0105112 3300048912 Bacteria 2622
193 Ga0496109_0181350 3300048912 Bacteria 1978
194 Ga0496110_0019734 3300048913 Bacteria 5679
195 Ga0496110_0106426 3300048913 Bacteria 2517
196 Ga0496112_0313811 3300048915 Bacteria 1513
197 Ga0501032_0233781 3300049569 Bacteria 1195
198 Ga0501038_0378195 3300049574 Bacteria 1099
199 Ga0501040_0066402 3300049576 Bacteria 2486
200 Ga0501040_0255823 3300049576 Bacteria 1249
201 Ga0501042_0134473 3300049578 Bacteria 1783
202 Ga0501042_0151901 3300049578 Bacteria 1670
203 Ga0501042_0170415 3300049578 Bacteria 1571
204 Ga0501047_0029347 3300049581 Bacteria 5306
205 Ga0501047_0215570 3300049581 Bacteria 1777
206 Ga0501048_0094639 3300049582 Bacteria 2107
207 Ga0501067_0149608 3300049583 Bacteria 1301
208 Ga0501074_0127061 3300049590 Bacteria 1824
209 Ga0501074_0159738 3300049590 Bacteria 1610
210 Ga0501076_0022313 3300049592 Bacteria 4865
211 Ga0501077_0023017 3300049593 Bacteria 3951
212 Ga0501079_0048359 3300049741 Bacteria 3282
213 Ga0501079_0155242 3300049741 Bacteria 1784
214 Ga0501080_0254032 3300049742 Bacteria 1603
215 Ga0501080_0324184 3300049742 Bacteria 1394
216 Ga0501264_002310 3300049761 Bacteria 1793
217 Ga0501275_005451 3300049772 Bacteria 1222
218 Ga0501035_0187674 3300049822 Bacteria 1779
219 Ga0501045_0241630 3300049824 Bacteria 1344
220 Ga0501045_0241722 3300049824 Bacteria 1344
221 nmdc:mga00v17_120507_c1 3300050491 Bacteria 1670
222 nmdc:mga00v17_5121_c1 3300050491 Bacteria 6891
223 nmdc:mga00v17_64004_c1 3300050491 Bacteria 2266
224 nmdc:mga0k408_20028_c1 3300050493 Bacteria 3744
225 nmdc:mga0k408_5218_c1 3300050493 Bacteria 6892
226 nmdc:mga0k408_71865_c1 3300050493 Bacteria 2020
227 nmdc:mga06z11_5903_c1 3300050494 Bacteria 4946
228 nmdc:mga06z11_75004_c1 3300050494 Bacteria 1800
229 nmdc:mga06z11_86214_c1 3300050494 Bacteria 1696
230 nmdc:mga04h51_3934_c1 3300050495 Bacteria 3656
231 nmdc:mga07m45_18337_c1 3300050496 Bacteria 3775
232 nmdc:mga07m45_33891_c1 3300050496 Bacteria 2837
233 nmdc:mga05p37_18646_c1 3300050507 Bacteria 8386
234 nmdc:mga05p37_73598_c1 3300050507 Bacteria 4205
235 nmdc:mga09592_10317_c1 3300050508 Bacteria 7602
236 nmdc:mga09592_139740_c1 3300050508 Bacteria 2087
237 nmdc:mga0qj67_100507_c1 3300050509 Bacteria 2332
238 nmdc:mga0qj67_11485_c1 3300050509 Bacteria 6636
239 nmdc:mga06r32_157534_c1 3300050510 Bacteria 2253
240 nmdc:mga06r32_45396_c1 3300050510 Bacteria 4188
241 nmdc:mga06r32_91366_c1 3300050510 Bacteria 2975
242 nmdc:mga08y16_26422_c1 3300050511 Bacteria 6122
243 nmdc:mga08y16_27887_c1 3300050511 Bacteria 5954
244 nmdc:mga0n895_346274_c1 3300050512 Bacteria 1505
245 nmdc:mga0a205_193233_c1 3300050515 Bacteria 1927
246 nmdc:mga0a205_5436_c1 3300050515 Bacteria 11479
247 nmdc:mga0a205_94288_c1 3300050515 Bacteria 2892
248 Ga0495619_0019980 3300053085 Bacteria 4262
249 Ga0501084_0084786 3300054114 Bacteria 2660
250 Ga0590071_001404 3300059421 Bacteria 6378
251 Ga0590075_000377 3300059424 Bacteria 12224
252 Ga0590077_001169 3300059426 Bacteria 6387
253 Ga0530510_0210330 3300061734 Bacteria 1445

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300031852 Ga0307410_10206259 Ga0307410_102062592 271
2 3300031911 Ga0307412_10056667 Ga0307412_100566673 271
3 3300032005 Ga0307411_10006439 Ga0307411_100064395 271
4 3300048915 Ga0496112_0313811 Ga0496112_0313811_360_1382 280
5 3300006844 Ga0075428_100020982 Ga0075428_1000209824 281
6 3300006847 Ga0075431_100101901 Ga0075431_1001019013 281
7 3300006880 Ga0075429_100021259 Ga0075429_1000212596 281
8 3300009147 Ga0114129_10052831 Ga0114129_100528315 281
9 3300050507 nmdc:mga05p37_18646_c1 nmdc:mga05p37_18646_c1_5531_6538 281
10 3300050508 nmdc:mga09592_139740_c1 nmdc:mga09592_139740_c1_884_1891 281
11 3300050510 nmdc:mga06r32_91366_c1 nmdc:mga06r32_91366_c1_1656_2663 281
12 3300005543 Ga0070672_100163701 Ga0070672_1001637012 291
13 3300025940 Ga0207691_10205579 Ga0207691_102055792 291
14 3300037471 Ga0395905_0273756 Ga0395905_0273756_399_1388 296
15 3300006847 Ga0075431_100120108 Ga0075431_1001201082 299
16 3300006871 Ga0075434_100351435 Ga0075434_1003514352 299
17 3300009147 Ga0114129_10151089 Ga0114129_101510894 299
18 3300050512 nmdc:mga0n895_346274_c1 nmdc:mga0n895_346274_c1_188_1174 299
19 3300031548 Ga0307408_100049324 Ga0307408_1000493242 300
20 3300031548 Ga0307408_100092052 Ga0307408_1000920522 300
21 3300031903 Ga0307407_10093117 Ga0307407_100931172 300
22 3300032005 Ga0307411_10045539 Ga0307411_100455392 300
23 3300032126 Ga0307415_100126307 Ga0307415_1001263072 300
24 3300032126 Ga0307415_100180715 Ga0307415_1001807152 300
25 3300049761 Ga0501264_002310 Ga0501264_002310_568_1575 300
26 3300049772 Ga0501275_005451 Ga0501275_005451_24_929 300
27 3300005328 Ga0070676_10083276 Ga0070676_100832761 301
28 3300005577 Ga0068857_100232909 Ga0068857_1002329091 301
29 3300005617 Ga0068859_100120084 Ga0068859_1001200842 301
30 3300005843 Ga0068860_100448985 Ga0068860_1004489851 301
31 3300005844 Ga0068862_100075403 Ga0068862_1000754032 301
32 3300006844 Ga0075428_100002973 Ga0075428_1000029739 301
33 3300006844 Ga0075428_100432408 Ga0075428_1004324081 301
34 3300006846 Ga0075430_100005077 Ga0075430_1000050773 301
35 3300006846 Ga0075430_100203754 Ga0075430_1002037542 301
36 3300006847 Ga0075431_100010504 Ga0075431_1000105042 301
37 3300006847 Ga0075431_100216999 Ga0075431_1002169992 301
38 3300006852 Ga0075433_10058114 Ga0075433_100581143 301
39 3300006880 Ga0075429_100007972 Ga0075429_1000079726 301
40 3300006931 Ga0097620_100120085 Ga0097620_1001200852 301
41 3300009094 Ga0111539_10006457 Ga0111539_100064572 301
42 3300009094 Ga0111539_10009435 Ga0111539_100094353 301
43 3300009147 Ga0114129_10004414 Ga0114129_100044148 301
44 3300009147 Ga0114129_10006643 Ga0114129_1000664310 301
45 3300009147 Ga0114129_10039279 Ga0114129_100392794 301
46 3300009553 Ga0105249_10000720 Ga0105249_100007205 301
47 3300011119 Ga0105246_10168053 Ga0105246_101680532 301
48 3300014745 Ga0157377_10053455 Ga0157377_100534552 301
49 3300025923 Ga0207681_10001584 Ga0207681_1000158411 301
50 3300025926 Ga0207659_10379988 Ga0207659_103799881 301
51 3300026116 Ga0207674_10250407 Ga0207674_102504071 301
52 3300027907 Ga0207428_10021760 Ga0207428_100217604 301
53 3300027907 Ga0207428_10040662 Ga0207428_100406624 301
54 3300031901 Ga0307406_10013506 Ga0307406_100135064 301
55 3300032002 Ga0307416_100484754 Ga0307416_1004847541 301
56 3300032005 Ga0307411_10099653 Ga0307411_100996532 301
57 3300035725 Ga0373947_0255343 Ga0373947_0255343_38_1045 301
58 3300042008 Ga0439450_002620 Ga0439450_002620_1383_2396 301
59 3300042436 Ga0439435_0019190 Ga0439435_0019190_710_1702 301
60 3300042439 Ga0439464_0000821 Ga0439464_0000821_1891_2904 301
61 3300049574 Ga0501038_0378195 Ga0501038_0378195_55_1065 301
62 3300049576 Ga0501040_0066402 Ga0501040_0066402_907_1899 301
63 3300049576 Ga0501040_0255823 Ga0501040_0255823_63_1055 301
64 3300049578 Ga0501042_0134473 Ga0501042_0134473_208_1200 301
65 3300049578 Ga0501042_0151901 Ga0501042_0151901_505_1515 301
66 3300049590 Ga0501074_0127061 Ga0501074_0127061_107_1099 301
67 3300049590 Ga0501074_0159738 Ga0501074_0159738_542_1534 301
68 3300049593 Ga0501077_0023017 Ga0501077_0023017_1954_2946 301
69 3300049741 Ga0501079_0048359 Ga0501079_0048359_2122_3114 301
70 3300049741 Ga0501079_0155242 Ga0501079_0155242_517_1509 301
71 3300049742 Ga0501080_0324184 Ga0501080_0324184_122_1132 301
72 3300049822 Ga0501035_0187674 Ga0501035_0187674_155_1165 301
73 3300049824 Ga0501045_0241630 Ga0501045_0241630_207_1199 301
74 3300049824 Ga0501045_0241722 Ga0501045_0241722_132_1142 301
75 3300050507 nmdc:mga05p37_73598_c1 nmdc:mga05p37_73598_c1_1718_2710 301
76 3300050508 nmdc:mga09592_10317_c1 nmdc:mga09592_10317_c1_5957_6949 301
77 3300050509 nmdc:mga0qj67_100507_c1 nmdc:mga0qj67_100507_c1_150_1163 301
78 3300050509 nmdc:mga0qj67_11485_c1 nmdc:mga0qj67_11485_c1_5158_6150 301
79 3300050510 nmdc:mga06r32_157534_c1 nmdc:mga06r32_157534_c1_1316_2227 301
80 3300050510 nmdc:mga06r32_45396_c1 nmdc:mga06r32_45396_c1_391_1404 301
81 3300050511 nmdc:mga08y16_26422_c1 nmdc:mga08y16_26422_c1_3137_4144 301
82 3300050511 nmdc:mga08y16_27887_c1 nmdc:mga08y16_27887_c1_1566_2579 301
83 3300050515 nmdc:mga0a205_193233_c1 nmdc:mga0a205_193233_c1_83_1090 301
84 3300050515 nmdc:mga0a205_5436_c1 nmdc:mga0a205_5436_c1_9749_10750 301
85 3300050515 nmdc:mga0a205_94288_c1 nmdc:mga0a205_94288_c1_735_1727 301
86 3300054114 Ga0501084_0084786 Ga0501084_0084786_1085_2077 301
87 3300059421 Ga0590071_001404 Ga0590071_001404_3788_4789 301
88 3300059424 Ga0590075_000377 Ga0590075_000377_4456_5457 301
89 3300059426 Ga0590077_001169 Ga0590077_001169_3820_4821 301
90 3300005331 Ga0070670_100171165 Ga0070670_1001711652 302
91 3300005355 Ga0070671_100131201 Ga0070671_1001312013 302
92 3300005455 Ga0070663_100012149 Ga0070663_1000121495 302
93 3300005456 Ga0070678_100039521 Ga0070678_1000395212 302
94 3300005543 Ga0070672_100012609 Ga0070672_1000126097 302
95 3300005841 Ga0068863_100180560 Ga0068863_1001805602 302
96 3300009553 Ga0105249_10361265 Ga0105249_103612652 302
97 3300025931 Ga0207644_10209080 Ga0207644_102090801 302
98 3300025937 Ga0207669_10019539 Ga0207669_100195395 302
99 3300026067 Ga0207678_10060573 Ga0207678_100605732 302
100 3300026118 Ga0207675_100426886 Ga0207675_1004268861 302
101 3300026121 Ga0207683_10024640 Ga0207683_100246406 302
102 3300048910 Ga0496107_0098773 Ga0496107_0098773_363_1277 302
103 3300048912 Ga0496109_0088133 Ga0496109_0088133_436_1350 302
104 3300048913 Ga0496110_0106426 Ga0496110_0106426_1456_2370 302
105 3300005339 Ga0070660_100035955 Ga0070660_1000359552 303
106 3300005354 Ga0070675_100095877 Ga0070675_1000958771 303
107 3300006028 Ga0070717_10515722 Ga0070717_105157221 303
108 3300025901 Ga0207688_10075884 Ga0207688_100758841 303
109 3300025919 Ga0207657_10012775 Ga0207657_100127754 303
110 3300025926 Ga0207659_10070107 Ga0207659_100701072 303
111 3300025933 Ga0207706_10067387 Ga0207706_100673873 303
112 3300026067 Ga0207678_10041205 Ga0207678_100412052 303
113 3300048907 Ga0496104_0248686 Ga0496104_0248686_201_1199 303
114 3300048913 Ga0496110_0019734 Ga0496110_0019734_1583_2581 303
115 3300005331 Ga0070670_100008089 Ga0070670_1000080894 304
116 3300005353 Ga0070669_100029141 Ga0070669_1000291415 304
117 3300005354 Ga0070675_100003967 Ga0070675_1000039674 304
118 3300005354 Ga0070675_100104969 Ga0070675_1001049692 304
119 3300005364 Ga0070673_100063419 Ga0070673_1000634192 304
120 3300005364 Ga0070673_100146080 Ga0070673_1001460802 304
121 3300005459 Ga0068867_100136132 Ga0068867_1001361321 304
122 3300005548 Ga0070665_100122569 Ga0070665_1001225691 304
123 3300005617 Ga0068859_100127136 Ga0068859_1001271362 304
124 3300005843 Ga0068860_100020233 Ga0068860_1000202333 304
125 3300006178 Ga0075367_10030501 Ga0075367_100305012 304
126 3300006195 Ga0075366_10004576 Ga0075366_100045764 304
127 3300006195 Ga0075366_10004947 Ga0075366_100049475 304
128 3300006195 Ga0075366_10064676 Ga0075366_100646762 304
129 3300006195 Ga0075366_10154315 Ga0075366_101543152 304
130 3300006353 Ga0075370_10005975 Ga0075370_100059754 304
131 3300006353 Ga0075370_10053361 Ga0075370_100533612 304
132 3300006881 Ga0068865_100292318 Ga0068865_1002923182 304
133 3300006931 Ga0097620_100127136 Ga0097620_1001271362 304
134 3300009551 Ga0105238_10027139 Ga0105238_100271396 304
135 3300014325 Ga0163163_10034268 Ga0163163_100342684 304
136 3300014326 Ga0157380_10000791 Ga0157380_100007913 304
137 3300014326 Ga0157380_10041046 Ga0157380_100410462 304
138 3300025315 Ga0207697_10001806 Ga0207697_100018065 304
139 3300025924 Ga0207694_10041968 Ga0207694_100419682 304
140 3300025925 Ga0207650_10003456 Ga0207650_100034564 304
141 3300025926 Ga0207659_10000982 Ga0207659_100009827 304
142 3300025926 Ga0207659_10050121 Ga0207659_100501212 304
143 3300025931 Ga0207644_10014271 Ga0207644_100142716 304
144 3300025938 Ga0207704_10247938 Ga0207704_102479382 304
145 3300025942 Ga0207689_10070132 Ga0207689_100701322 304
146 3300025945 Ga0207679_10134568 Ga0207679_101345681 304
147 3300025960 Ga0207651_10042260 Ga0207651_100422603 304
148 3300025960 Ga0207651_10312267 Ga0207651_103122672 304
149 3300026067 Ga0207678_10106439 Ga0207678_101064392 304
150 3300026089 Ga0207648_10126432 Ga0207648_101264322 304
151 3300026118 Ga0207675_100260155 Ga0207675_1002601552 304
152 3300028379 Ga0268266_10372309 Ga0268266_103723092 304
153 3300028381 Ga0268264_10116303 Ga0268264_101163032 304
154 3300045051 Ga0451576_0381576 Ga0451576_0381576_296_1294 304
155 3300046683 Ga0495658_0068834 Ga0495658_0068834_25_1026 304
156 3300049569 Ga0501032_0233781 Ga0501032_0233781_127_1155 304
157 3300049578 Ga0501042_0170415 Ga0501042_0170415_140_1141 304
158 3300049582 Ga0501048_0094639 Ga0501048_0094639_765_1793 304
159 3300049592 Ga0501076_0022313 Ga0501076_0022313_3342_4370 304
160 3300050493 nmdc:mga0k408_20028_c1 nmdc:mga0k408_20028_c1_580_1590 304
161 3300050493 nmdc:mga0k408_71865_c1 nmdc:mga0k408_71865_c1_594_1595 304
162 3300050494 nmdc:mga06z11_5903_c1 nmdc:mga06z11_5903_c1_279_1280 304
163 3300050494 nmdc:mga06z11_75004_c1 nmdc:mga06z11_75004_c1_688_1698 304
164 3300050495 nmdc:mga04h51_3934_c1 nmdc:mga04h51_3934_c1_806_1807 304
165 3300050496 nmdc:mga07m45_18337_c1 nmdc:mga07m45_18337_c1_1385_2386 304
166 3300050496 nmdc:mga07m45_33891_c1 nmdc:mga07m45_33891_c1_1802_2812 304
167 3300005353 Ga0070669_100016320 Ga0070669_1000163202 305
168 3300005354 Ga0070675_100039870 Ga0070675_1000398702 305
169 3300005355 Ga0070671_100051424 Ga0070671_1000514243 305
170 3300005364 Ga0070673_100234523 Ga0070673_1002345231 305
171 3300005456 Ga0070678_100207865 Ga0070678_1002078652 305
172 3300005543 Ga0070672_100006000 Ga0070672_1000060002 305
173 3300005840 Ga0068870_10238223 Ga0068870_102382231 305
174 3300006042 Ga0075368_10004666 Ga0075368_100046665 305
175 3300025901 Ga0207688_10003534 Ga0207688_100035345 305
176 3300025908 Ga0207643_10221538 Ga0207643_102215382 305
177 3300025926 Ga0207659_10051006 Ga0207659_100510062 305
178 3300025960 Ga0207651_10220943 Ga0207651_102209432 305
179 3300048912 Ga0496109_0105112 Ga0496109_0105112_1054_2073 305
180 3300049583 Ga0501067_0149608 Ga0501067_0149608_226_1266 306
181 3300061734 Ga0530510_0210330 Ga0530510_0210330_56_1078 307
182 3300005355 Ga0070671_100280391 Ga0070671_1002803912 309
183 3300005364 Ga0070673_100070143 Ga0070673_1000701433 309
184 3300005543 Ga0070672_100024715 Ga0070672_1000247152 309
185 3300007076 Ga0075435_100004190 Ga0075435_1000041909 309
186 3300009177 Ga0105248_10141401 Ga0105248_101414012 309
187 3300014497 Ga0182008_10111656 Ga0182008_101116562 309
188 3300025931 Ga0207644_10077923 Ga0207644_100779233 309
189 3300025940 Ga0207691_10015563 Ga0207691_100155638 309
190 3300037471 Ga0395905_0537360 Ga0395905_0537360_47_1060 309
191 3300005336 Ga0070680_100022161 Ga0070680_1000221612 310
192 3300005471 Ga0070698_100199127 Ga0070698_1001991272 310
193 3300005616 Ga0068852_100096200 Ga0068852_1000962002 310
194 3300007076 Ga0075435_100361505 Ga0075435_1003615052 310
195 3300009147 Ga0114129_10006604 Ga0114129_100066042 310
196 3300025920 Ga0207649_10235743 Ga0207649_102357432 310
197 3300026142 Ga0207698_10151234 Ga0207698_101512342 310
198 3300049581 Ga0501047_0029347 Ga0501047_0029347_766_1794 310
199 3300049742 Ga0501080_0254032 Ga0501080_0254032_22_1050 310
200 3300005290 Ga0065712_10182695 Ga0065712_101826951 311
201 3300005295 Ga0065707_10109544 Ga0065707_101095442 311
202 3300005329 Ga0070683_100079518 Ga0070683_1000795182 311
203 3300005331 Ga0070670_100044984 Ga0070670_1000449842 311
204 3300005333 Ga0070677_10004986 Ga0070677_100049863 311
205 3300005345 Ga0070692_10136546 Ga0070692_101365461 311
206 3300005366 Ga0070659_100159203 Ga0070659_1001592032 311
207 3300005436 Ga0070713_100042822 Ga0070713_1000428222 311
208 3300005456 Ga0070678_100148211 Ga0070678_1001482112 311
209 3300005457 Ga0070662_100164904 Ga0070662_1001649042 311
210 3300005459 Ga0068867_100056068 Ga0068867_1000560682 311
211 3300005535 Ga0070684_100247237 Ga0070684_1002472371 311
212 3300005546 Ga0070696_100144295 Ga0070696_1001442951 311
213 3300005546 Ga0070696_100236878 Ga0070696_1002368782 311
214 3300005547 Ga0070693_100056611 Ga0070693_1000566112 311
215 3300005564 Ga0070664_100064500 Ga0070664_1000645003 311
216 3300005577 Ga0068857_100441854 Ga0068857_1004418541 311
217 3300005718 Ga0068866_10021626 Ga0068866_100216262 311
218 3300005844 Ga0068862_100333780 Ga0068862_1003337802 311
219 3300006028 Ga0070717_10010205 Ga0070717_100102054 311
220 3300006051 Ga0075364_10001239 Ga0075364_100012393 311
221 3300006051 Ga0075364_10024447 Ga0075364_100244472 311
222 3300006051 Ga0075364_10045914 Ga0075364_100459142 311
223 3300006177 Ga0075362_10000731 Ga0075362_100007319 311
224 3300006178 Ga0075367_10029189 Ga0075367_100291892 311
225 3300006178 Ga0075367_10107223 Ga0075367_101072232 311
226 3300006195 Ga0075366_10004523 Ga0075366_100045236 311
227 3300009148 Ga0105243_10038919 Ga0105243_100389192 311
228 3300009553 Ga0105249_10288707 Ga0105249_102887072 311
229 3300025893 Ga0207682_10006769 Ga0207682_100067693 311
230 3300025901 Ga0207688_10051257 Ga0207688_100512572 311
231 3300025918 Ga0207662_10005333 Ga0207662_100053332 311
232 3300025919 Ga0207657_10150112 Ga0207657_101501122 311
233 3300025925 Ga0207650_10072757 Ga0207650_100727572 311
234 3300025926 Ga0207659_10106624 Ga0207659_101066242 311
235 3300025944 Ga0207661_10022067 Ga0207661_100220673 311
236 3300026075 Ga0207708_10005407 Ga0207708_100054079 311
237 3300026089 Ga0207648_10036891 Ga0207648_100368914 311
238 3300026116 Ga0207674_10538435 Ga0207674_105384351 311
239 3300026118 Ga0207675_100073552 Ga0207675_1000735522 311
240 3300032002 Ga0307416_100331945 Ga0307416_1003319452 311
241 3300035091 Ga0373951_0023369 Ga0373951_0023369_120_1169 311
242 3300035691 Ga0373931_0055409 Ga0373931_0055409_476_1525 311
243 3300035725 Ga0373947_0045578 Ga0373947_0045578_234_1265 311
244 3300036401 Ga0373937_0001053 Ga0373937_0001053_14686_15720 311
245 3300037068 Ga0373925_0003723 Ga0373925_0003723_88_1116 311
246 3300048912 Ga0496109_0181350 Ga0496109_0181350_35_1108 311
247 3300049581 Ga0501047_0215570 Ga0501047_0215570_661_1692 311
248 3300050491 nmdc:mga00v17_120507_c1 nmdc:mga00v17_120507_c1_169_1191 311
249 3300050491 nmdc:mga00v17_5121_c1 nmdc:mga00v17_5121_c1_2199_3218 311
250 3300050491 nmdc:mga00v17_64004_c1 nmdc:mga00v17_64004_c1_159_1178 311
251 3300050493 nmdc:mga0k408_5218_c1 nmdc:mga0k408_5218_c1_2110_3129 311
252 3300050494 nmdc:mga06z11_86214_c1 nmdc:mga06z11_86214_c1_377_1396 311
253 3300053085 Ga0495619_0019980 Ga0495619_0019980_2870_3916 311

Structural Annotation

Top 5 Hits

ID Description Score Start End
6dn4-assembly1.cif.gz_A cronobacter sakazakii (enterobacter sakazakii) metallo-beta-lactamse harldq motif 0.8037 18 83
5ws2-assembly1.cif.gz_A crystal structure of mpy-rnase j (mutant s247a), an archaeal rnase j from methanolobus psychrophilus r15, complex with rna 0.7636 16 290
2dkf-assembly5.cif.gz_C crystal structure of ttha0252 from thermus thermophilus hb8, a rna degradation protein of the metallo-beta-lactamase superfamily 0.763 2 291
7pcr-assembly1.cif.gz_A-2 helicobacter pylori rnase j 0.7544 18 286
3af6-assembly1.cif.gz_A the crystal structure of an archaeal cpsf subunit, ph1404 from pyrococcus horikoshii complexed with rna-analog 0.7539 18 290
ID Description Score Start End Superfamily
af_Q4DTW2_23_113_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8811 37 126 3.60.15.10
af_Q4DTW2_23_113_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8633 37 126 3.60.15.10
af_O35218_6_256_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8523 18 134 3.60.15.10
af_Q60355_2_196_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8408 18 106 3.60.15.10
af_O74740_7_249_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8374 18 133 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A2R7QPZ3-F1-model_v4 DNA ligase-associated DEXH box helicase 0.9691 2 190 GO:0004521
GO:0016874
AF-A0A4Q5UZZ0-F1-model_v4 deleted 0.9663 2 149
AF-A0A4Q6E0H8-F1-model_v4 DNA ligase-associated DEXH box helicase 0.9641 2 123 GO:0004521
GO:0016874
AF-A0A2E1SUE9-F1-model_v4 DNA ligase-associated DEXH box helicase 0.9633 11 296 GO:0004521
GO:0016874
AF-A0A7V5SD65-F1-model_v4 DNA ligase-associated DEXH box helicase 0.9607 2 204 GO:0004521
GO:0016874

Feature Viewer

pLDDT pTM Quality
87.57 0.86 High
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Predicted Structure (AlphaFold2)

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