F363637

General Info

Members Datasets Scaffolds Average Seq Length
252 232 83 201

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2508501127|2509145666
Length 227
Sequence RKPTISIQRSGQRLCENACLGQGVTTNFDELLDCFHATLETFDDALVRDAVARIGWAMPARLLEPRPLACLRQLDRIVELAPANAQPLARLLAERRGELRWGQTYSEADLGKTFIDKYGWLEVFGMRGHFVNDEVAAGLLILGPEIVYPDHHHVAEEIYVPLTGGTEWRMGEGDFGRREAGEVIHHASDVSHAMRTGKEPLLALYIWRGGPLAAKSTITGTVSQGRN

Samples

Sample ID Description Type Environment
1 2503198000 Mesorhizobium opportunistum WSM2075 Isolate Nodule
2 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
3 2508501127 Mesorhizobium sp. WSM2561 Isolate Nodule
4 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
5 2512875016 Mesorhizobium japonicum R7A Isolate Nodule
6 2512875024 Mesorhizobium loti R88b Isolate Nodule
7 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
8 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
9 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
10 2597489875 Mesorhizobium ciceri ca181 Isolate Unclassified
11 2599185301 Mesorhizobium sp. NFR06 Isolate Rhizoplane
12 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
13 2643221627 Mesorhizobium sp. Root102 Isolate Unclassified
14 2693429783 Mesorhizobium sp. LCM 4577 Isolate Rhizosphere
15 2693429784 Mesorhizobium sp. LCM 4576 Isolate Rhizosphere
16 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
17 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
18 2791355123 Mesorhizobium sophorae ICMP 19535 Isolate Unclassified
19 2841734538 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 Isolate Nodule
20 2844002411 Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 Isolate Nodule
21 2844009547 Mesorhizobium sp. M7A.F.Ce.TU.012.03.2.1 Isolate Nodule
22 2847670302 Mesorhizobium sp. M3A.F.Ca.ET.080.04.2.1 Isolate Nodule
23 2856314179 Mesorhizobium sp. M3A.F.Ca.ET.175.01.1.1 Isolate Nodule
24 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
25 2856342000 Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 Isolate Nodule
26 2856364286 Mesorhizobium sp. M00.F.Ca.ET.151.01.1.1 Isolate Nodule
27 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
28 2869234852 Mesorhizobium sp. M7A.T.Ca.US.000.02.2.1 Isolate Nodule
29 2869242130 Mesorhizobium sp. M7A.F.Ca.CA.004.11.2.1 Isolate Nodule
30 2869256925 Mesorhizobium sp. M7A.F.Ca.MR.176.00.0.0 Isolate Nodule
31 2869278585 Mesorhizobium sp. M8A.F.Ca.ET.198.01.1.1 Isolate Nodule
32 2869285874 Mesorhizobium sp. M2D.F.Ca.ET.147.01.1.1 Isolate Nodule
33 2871429161 Mesorhizobium sp. M2D.F.Ca.ET.225.01.1.1 Isolate Nodule
34 2871451962 Mesorhizobium sp. M7A.F.Ca.US.006.01.1.1 Isolate Nodule
35 2871466892 Mesorhizobium sp. M7D.F.Ca.US.004.01.2.1 Isolate Nodule
36 2871474448 Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 Isolate Nodule
37 2871481445 Mesorhizobium sp. M7A.F.Ca.CA.004.02.1.1 Isolate Nodule
38 2871495908 Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 Isolate Nodule
39 2874109183 Mesorhizobium sp. M7A.T.Ca.TU.009.02.1.1 Isolate Nodule
40 2874116593 Mesorhizobium sp. M7A.F.Ca.CA.004.08.2.1 Isolate Nodule
41 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
42 2874139085 Mesorhizobium sp. M8A.F.Ca.ET.207.01.1.1 Isolate Nodule
43 2874146452 Mesorhizobium sp. M2D.F.Ca.ET.160.01.1.1 Isolate Nodule
44 2874155637 Mesorhizobium sp. M2D.F.Ca.ET.224.01.1.1 Isolate Nodule
45 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
46 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
47 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
48 2876377896 Mesorhizobium sp. M2C.T.Ca.TU.009.01.2.1 Isolate Nodule
49 2876386047 Mesorhizobium sp. M7A.F.Ca.CA.004.07.1.1 Isolate Nodule
50 2876392853 Mesorhizobium sp. M1D.F.Ca.ET.234.01.1.1 Isolate Nodule
51 2876413966 Mesorhizobium sp. M2D.F.Ca.ET.233.01.1.1 Isolate Nodule
52 2876420981 Mesorhizobium sp. M7A.F.Ca.CA.004.08.1.1 Isolate Nodule
53 2878035449 Mesorhizobium sp. M3A.F.Ca.ET.201.01.1.1 Isolate Nodule
54 2878730984 Mesorhizobium sp. M7A.T.Ca.TU.009.01.1.1 Isolate Nodule
55 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
56 2878745973 Mesorhizobium sp. M2D.F.Ca.ET.226.01.1.1 Isolate Nodule
57 2878760144 Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 Isolate Nodule
58 2878767105 Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 Isolate Nodule
59 2878788777 Mesorhizobium sp. M6A.T.Ca.TU.002.02.2.1 Isolate Nodule
60 2881147464 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 Isolate Nodule
61 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
62 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
63 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
64 2885312484 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 Isolate Nodule
65 2885334103 Mesorhizobium sp. M1E.F.Ca.ET.063.01.1.1 Isolate Nodule
66 2888337043 Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 Isolate Nodule
67 2888343758 Mesorhizobium sp. AA22 Isolate Unclassified
68 2888350351 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 Isolate Nodule
69 2889010040 Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 Isolate Nodule
70 2889016732 Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 Isolate Nodule
71 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
72 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
73 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
74 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
75 2903540706 Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 Isolate Nodule
76 2904659560 Mesorhizobium sp. M1D.F.Ca.ET.184.01.1.1 Isolate Nodule
77 2906308376 Mesorhizobium sp. M2D.F.Ca.ET.185.01.1.1 Isolate Nodule
78 2906321335 Mesorhizobium sp. M2D.F.Ca.ET.206.01.1.1 Isolate Nodule
79 2906378014 Mesorhizobium sp. M7D.F.Ca.US.004.03.1.1 Isolate Nodule
80 2906401398 Mesorhizobium sp. M7A.F.Ca.CA.004.10.1.1 Isolate Nodule
81 2906414383 Mesorhizobium sp. M3A.F.Ca.ET.174.01.1.1 Isolate Nodule
82 2906427513 Mesorhizobium sp. M7A.F.Ca.CA.004.05.1.1 Isolate Nodule
83 2922130491 Mesorhizobium sp. M00.F.Ca.ET.038.03.1.1 Isolate Nodule
84 2922185730 Mesorhizobium sp. M2A.F.Ca.ET.037.01.1.1 Isolate Nodule
85 2924710171 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.2 Isolate Nodule
86 2924718760 Mesorhizobium sp. M8A.F.Ca.ET.023.01.1.1 Isolate Nodule
87 2924733363 Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1 Isolate Nodule
88 2924741084 Mesorhizobium sp. M7A.F.Ca.CA.004.09.1.2 Isolate Nodule
89 2924754689 Mesorhizobium sp. M5C.F.Ca.IN.020.32.2.1 Isolate Nodule
90 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
91 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
92 2937813078 Mesorhizobium sp. M2D.F.Ca.ET.223.01.1.1 Isolate Nodule
93 2937822353 Mesorhizobium neociceri CCANP35 Isolate Nodule
94 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
95 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
96 2937861824 Mesorhizobium sp. M7A.F.Ca.CA.001.07.2.1 Isolate Nodule
97 2937877337 Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 Isolate Nodule
98 2937972304 Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 Isolate Nodule
99 2937980651 Mesorhizobium sp. M7A.F.Ca.CA.004.04.2.1 Isolate Nodule
100 2937994558 Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 Isolate Nodule
101 2938014810 Mesorhizobium sp. M2C.T.Ca.TU.002.02.1.1 Isolate Nodule
102 2958034702 Mesorhizobium sp. M8A.F.Ca.ET.202.01.1.1 Isolate Nodule
103 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
104 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
105 2958071322 Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 Isolate Nodule
106 2958084443 Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 Isolate Nodule
107 2958092219 Mesorhizobium sp. M8A.F.Ca.ET.059.01.1.1 Isolate Nodule
108 2958100919 Mesorhizobium sp. M2A.F.Ca.ET.015.02.1.1 Isolate Nodule
109 2958108152 Mesorhizobium sp. M7A.F.Ca.CA.004.11.1.1 Isolate Nodule
110 2958130278 Mesorhizobium sp. M2D.F.Ca.ET.148.01.1.1 Isolate Nodule
111 2958144490 Mesorhizobium sp. M8A.F.Ca.ET.021.01.1.1 Isolate Nodule
112 2958165035 Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 Isolate Nodule
113 2958172287 Mesorhizobium sp. M2A.F.Ca.ET.029.05.1.1 Isolate Nodule
114 2958179912 Mesorhizobium sp. M2D.F.Ca.ET.171.01.1.1 Isolate Nodule
115 2961077736 Mesorhizobium sp. M2D.F.Ca.ET.178.01.1.1 Isolate Nodule
116 2961114664 Mesorhizobium sp. M1D.F.Ca.ET.231.01.1.1 Isolate Nodule
117 2961163497 Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 Isolate Nodule
118 2961183825 Mesorhizobium sp. M7A.F.Ca.CA.001.12.1.1 Isolate Nodule
119 2963644680 Mesorhizobium japonicum R7A Isolate Nodule
120 2965018300 Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 Isolate Nodule
121 2965062239 Mesorhizobium sp. M1A.F.Ca.ET.072.01.1.1 Isolate Nodule
122 2965119406 Mesorhizobium sp. M2A.F.Ca.ET.067.02.1.1 Isolate Nodule
123 2968016561 Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 Isolate Nodule
124 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
125 2968110612 Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 Isolate Nodule
126 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
127 2968128360 Mesorhizobium sp. WSM3873 Isolate Unclassified
128 2968171901 Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 Isolate Nodule
129 2970469710 Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 Isolate Nodule
130 2970510686 Mesorhizobium sp. M7A.F.Ca.MR.148.00.0.0 Isolate Nodule
131 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
132 2970532167 Mesorhizobium sp. M7A.F.Ca.CA.002.05.1.1 Isolate Nodule
133 2970540015 Mesorhizobium sp. M5C.F.Ca.IN.020.29.1.1 Isolate Nodule
134 2970554993 Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 Isolate Nodule
135 2970593180 Mesorhizobium sp. M8A.F.Ca.ET.197.01.1.1 Isolate Nodule
136 2970619444 Mesorhizobium sp. M7A.F.Ca.ET.027.02.1.1 Isolate Nodule
137 2977843712 Mesorhizobium sp. M2D.F.Ca.ET.140.01.1.1 Isolate Nodule
138 2977851361 Mesorhizobium sp. M7A.F.Ca.CA.004.06.2.1 Isolate Nodule
139 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
140 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
141 2977971508 Mesorhizobium sp. M2A.F.Ca.ET.039.01.1.1 Isolate Nodule
142 2977986579 Mesorhizobium intechi BD68 Isolate Unclassified
143 2979710463 Mesorhizobium sp. M2A.F.Ca.ET.017.03.2.1 Isolate Nodule
144 2979742915 Mesorhizobium sp. M2A.F.Ca.ET.046.02.1.1 Isolate Nodule
145 2979764755 Mesorhizobium sp. M7A.F.Ca.CA.004.05.2.1 Isolate Nodule
146 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
147 2987652177 Mesorhizobium sp. M2A.F.Ca.ET.042.01.1.1 Isolate Nodule
148 2987659509 Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 Isolate Nodule
149 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
150 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
151 2996386984 Mesorhizobium sp. M7A.F.Ca.MR.245.00.0.0 Isolate Nodule
152 3004188549 Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 Isolate Nodule
153 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule
154 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
155 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
156 3004232784 Mesorhizobium sp. M7A.T.Ca.US.000.02.1.1 Isolate Nodule
157 3004248173 Mesorhizobium sp. M7A.F.Ca.CA.004.06.1.1 Isolate Nodule
158 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
159 3004289098 Mesorhizobium sp. M8A.F.Ca.ET.023.02.2.1 Isolate Nodule
160 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
161 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
162 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
163 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
164 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
165 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
166 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
167 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
168 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
169 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
170 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
171 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
172 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
173 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
174 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
175 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
176 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
177 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
178 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
179 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
180 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
181 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
182 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
183 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
184 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
185 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
186 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
187 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
188 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
189 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
190 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
191 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
192 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
193 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
194 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
195 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
196 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
197 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
198 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
199 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
200 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
201 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
202 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
203 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
204 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
205 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
206 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
207 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
208 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
209 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
210 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
211 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
212 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
213 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
214 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
215 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
216 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
217 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
218 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
219 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
220 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
221 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
222 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
223 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
224 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
225 8004312739 Mesorhizobium sp. M7A.F.Ca.MR.362.00.0.0 Isolate Nodule
226 8004387939 Mesorhizobium sp. M2D.F.Ca.ET.232.01.1.1 Isolate Nodule
227 8004395343 Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1 Isolate Nodule
228 8004633249 Mesorhizobium sp. M6A.T.Ce.TU.002.03.1.1 Isolate Nodule
229 8004640170 Mesorhizobium sp. GbtcB19 Isolate Unclassified
230 8004714634 Mesorhizobium sp. M2D.F.Ca.ET.153.01.1.1 Isolate Nodule
231 8004727605 Mesorhizobium sp. M7A.F.Ca.CA.004.01.1.1 Isolate Nodule
232 8055617313 Mesorhizobium onobrychidis OM4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 32.94
Metatranscriptomes 0
Isolates 67.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.13
Nodule 57.94
Rhizoplane 2.38
Rhizosphere 19.84
Stem 0
Stem Tuber 0
Unclassified 10.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000062 3300003214 Bacteria 206459
2 Ga0070660_100137199 3300005339 Bacteria 1960
3 Ga0068867_100450116 3300005459 Bacteria 1097
4 Ga0068855_100321626 3300005563 Bacteria 1710
5 Ga0068857_100100712 3300005577 Bacteria 2592
6 Ga0068856_100338164 3300005614 Bacteria 1523
7 Ga0075365_10001521 3300006038 Bacteria 10608
8 Ga0075363_100003906 3300006048 Bacteria 6430
9 Ga0075363_100126201 3300006048 Bacteria 1433
10 Ga0075364_10056146 3300006051 Bacteria 2578
11 Ga0075367_10050215 3300006178 Bacteria 2462
12 Ga0075367_10135825 3300006178 Bacteria 1521
13 Ga0075370_10023779 3300006353 Bacteria 3378
14 Ga0105240_10911568 3300009093 Bacteria 945
15 Ga0105245_11691910 3300009098 Bacteria 685
16 Ga0105241_10137197 3300009174 Bacteria 1988
17 Ga0105237_10211812 3300009545 Bacteria 1938
18 Ga0105238_10003791 3300009551 Bacteria 15027
19 Ga0105249_10281255 3300009553 Bacteria 1662
20 Ga0105239_10012234 3300010375 Bacteria 9562
21 Ga0105239_10041578 3300010375 Bacteria 5037
22 Ga0105239_11066307 3300010375 Bacteria 930
23 Ga0105239_11108243 3300010375 Bacteria 911
24 Ga0105246_10132780 3300011119 Bacteria 1862
25 Ga0209233_1000129 3300025261 Bacteria 206511
26 Ga0209758_1006029 3300025297 Bacteria 8945
27 Ga0207647_10052402 3300025904 Bacteria 2519
28 Ga0207671_10330336 3300025914 Bacteria 1207
29 Ga0207671_10364616 3300025914 Bacteria 1147
30 Ga0207657_10088011 3300025919 Bacteria 2597
31 Ga0207694_10007136 3300025924 Bacteria 8491
32 Ga0207639_10010467 3300026041 Bacteria 6424
33 Ga0207702_10064589 3300026078 Bacteria 3132
34 Ga0207702_10145699 3300026078 Bacteria 2149
35 Ga0207648_10069436 3300026089 Bacteria 3070
36 Ga0207674_10099357 3300026116 Bacteria 2892
37 Ga0395899_0354768 3300037312 Bacteria 980
38 Ga0395899_0641749 3300037312 Bacteria 672
39 Ga0395900_0249597 3300037418 Bacteria 1776
40 Ga0395898_0116020 3300037466 Bacteria 2566
41 Ga0395905_0195109 3300037471 Bacteria 1898
42 Ga0395901_0032694 3300038443 Bacteria 5366
43 Ga0395901_0274634 3300038443 Bacteria 1752
44 Ga0395901_0415631 3300038443 Bacteria 1380
45 Ga0395901_0987951 3300038443 Bacteria 818
46 Ga0466972_0015966 3300044658 Bacteria 3754
47 Ga0466960_0193260 3300044901 Bacteria 1108
48 Ga0495610_0051027 3300046512 Bacteria 2016
49 Ga0495643_0086420 3300046522 Bacteria 1624
50 Ga0495660_0220379 3300046810 Bacteria 895
51 Ga0495686_0275978 3300047472 Bacteria 936
52 Ga0496102_0369050 3300048905 Bacteria 1351
53 Ga0496103_0344970 3300048906 Bacteria 958
54 Ga0496112_0328080 3300048915 Bacteria 1474
55 Ga0496113_0513618 3300048916 Bacteria 962
56 Ga0496115_0398376 3300048918 Bacteria 1117
57 Ga0496119_0104986 3300048922 Bacteria 1579
58 Ga0496119_0116300 3300048922 Bacteria 1476
59 Ga0496120_0008154 3300048923 Bacteria 7682
60 Ga0496124_0481165 3300048927 Bacteria 838
61 Ga0496125_0086661 3300048928 Bacteria 2368
62 Ga0496126_0102499 3300048929 Bacteria 2502
63 Ga0496126_0545268 3300048929 Bacteria 921
64 Ga0501032_0070076 3300049569 Bacteria 2339
65 Ga0501033_0023316 3300049570 Bacteria 4668
66 Ga0501033_0121214 3300049570 Bacteria 1898
67 Ga0501033_0387877 3300049570 Bacteria 975
68 Ga0501034_0107696 3300049571 Bacteria 2779
69 Ga0501047_0055654 3300049581 Bacteria 3825
70 Ga0501035_0024921 3300049822 Bacteria 5486
71 nmdc:mga03683_67831_c2 3300050489 Bacteria 761
72 nmdc:mga03683_74063_c1 3300050489 Bacteria 1460
73 nmdc:mga03n38_28035_c2 3300050490 Bacteria 1089
74 nmdc:mga03n38_6027_c1 3300050490 Bacteria 4179
75 nmdc:mga00v17_3640_c1 3300050491 Bacteria 7965
76 nmdc:mga0yw44_244996_c1 3300050492 Bacteria 1192
77 nmdc:mga0yw44_777_c1 3300050492 Bacteria 11835
78 nmdc:mga0yw44_99077_c1 3300050492 Bacteria 1854
79 nmdc:mga07m45_38564_c2 3300050496 Bacteria 1863
80 Ga0500610_0006143 3300053079 Bacteria 5009
81 Ga0500643_028030 3300053087 Bacteria 1745
82 Ga0500658_0080742 3300053134 Bacteria 1390
83 Ga0500620_092726 3300053155 Bacteria 1053

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048906 Ga0496103_0344970 Ga0496103_0344970_185_733 179
2 3300049570 Ga0501033_0121214 Ga0501033_0121214_754_1368 186
3 3300046810 Ga0495660_0220379 Ga0495660_0220379_94_693 191
4 3300009098 Ga0105245_11691910 Ga0105245_116919101 195
5 iso_pu_bacteria 2885334103 2885334307 196
6 iso_pu_bacteria 2503198000 2503201923 197
7 iso_pu_bacteria 2508501123 2509116025 197
8 iso_pu_bacteria 2509276022 2509396601 197
9 iso_pu_bacteria 2512875016 2512931185 197
10 iso_pu_bacteria 2512875024 2512958995 197
11 iso_pu_bacteria 2513237090 2513610854 197
12 iso_pu_bacteria 2513237164 2514038276 197
13 iso_pu_bacteria 2513237305 2514420176 197
14 iso_pu_bacteria 2599185301 2599938432 197
15 iso_pu_bacteria 2643221595 2643986985 197
16 iso_pu_bacteria 2643221627 2644158482 197
17 iso_pu_bacteria 2693429783 2694633220 197
18 iso_pu_bacteria 2693429784 2694638208 197
19 iso_pu_bacteria 2721755686 2723575691 197
20 iso_pu_bacteria 2756170246 2756675609 197
21 iso_pu_bacteria 2791355123 2792749556 197
22 iso_pu_bacteria 2841734538 2841739572 197
23 iso_pu_bacteria 2844002411 2844006111 197
24 iso_pu_bacteria 2844009547 2844014083 197
25 iso_pu_bacteria 2847670302 2847675882 197
26 iso_pu_bacteria 2856314179 2856314574 197
27 iso_pu_bacteria 2856320880 2856325556 197
28 iso_pu_bacteria 2856342000 2856347305 197
29 iso_pu_bacteria 2856364286 2856370436 197
30 iso_pu_bacteria 2857349434 2857350780 197
31 iso_pu_bacteria 2869234852 2869238741 197
32 iso_pu_bacteria 2869242130 2869245412 197
33 iso_pu_bacteria 2869256925 2869257677 197
34 iso_pu_bacteria 2869278585 2869279181 197
35 iso_pu_bacteria 2869285874 2869291837 197
36 iso_pu_bacteria 2871429161 2871435046 197
37 iso_pu_bacteria 2871451962 2871452210 197
38 iso_pu_bacteria 2871466892 2871468224 197
39 iso_pu_bacteria 2871474448 2871474789 197
40 iso_pu_bacteria 2871481445 2871486730 197
41 iso_pu_bacteria 2871495908 2871502950 197
42 iso_pu_bacteria 2874109183 2874110387 197
43 iso_pu_bacteria 2874116593 2874121746 197
44 iso_pu_bacteria 2874123672 2874123748 197
45 iso_pu_bacteria 2874139085 2874144929 197
46 iso_pu_bacteria 2874146452 2874149437 197
47 iso_pu_bacteria 2874155637 2874157700 197
48 iso_pu_bacteria 2874168670 2874174493 197
49 iso_pu_bacteria 2876363079 2876369244 197
50 iso_pu_bacteria 2876369609 2876377756 197
51 iso_pu_bacteria 2876377896 2876380586 197
52 iso_pu_bacteria 2876386047 2876392419 197
53 iso_pu_bacteria 2876392853 2876394531 197
54 iso_pu_bacteria 2876413966 2876415903 197
55 iso_pu_bacteria 2876420981 2876426860 197
56 iso_pu_bacteria 2878035449 2878039953 197
57 iso_pu_bacteria 2878730984 2878733149 197
58 iso_pu_bacteria 2878738818 2878745563 197
59 iso_pu_bacteria 2878745973 2878752181 197
60 iso_pu_bacteria 2878760144 2878766842 197
61 iso_pu_bacteria 2878767105 2878774039 197
62 iso_pu_bacteria 2878788777 2878794941 197
63 iso_pu_bacteria 2881147464 2881151828 197
64 iso_pu_bacteria 2881161766 2881167832 197
65 iso_pu_bacteria 2882632389 2882636639 197
66 iso_pu_bacteria 2885305155 2885309729 197
67 iso_pu_bacteria 2885312484 2885317698 197
68 iso_pu_bacteria 2888337043 2888339733 197
69 iso_pu_bacteria 2888343758 2888347128 197
70 iso_pu_bacteria 2888350351 2888356065 197
71 iso_pu_bacteria 2889010040 2889010998 197
72 iso_pu_bacteria 2889016732 2889017310 197
73 iso_pu_bacteria 2903448605 2903455345 197
74 iso_pu_bacteria 2903492973 2903493261 197
75 iso_pu_bacteria 2903521522 2903523149 197
76 iso_pu_bacteria 2903528002 2903534391 197
77 iso_pu_bacteria 2903540706 2903548089 197
78 iso_pu_bacteria 2904659560 2904661165 197
79 iso_pu_bacteria 2906308376 2906314575 197
80 iso_pu_bacteria 2906321335 2906327743 197
81 iso_pu_bacteria 2906378014 2906385557 197
82 iso_pu_bacteria 2906401398 2906404703 197
83 iso_pu_bacteria 2906414383 2906414527 197
84 iso_pu_bacteria 2906427513 2906427964 197
85 iso_pu_bacteria 2922130491 2922132612 197
86 iso_pu_bacteria 2922185730 2922190098 197
87 iso_pu_bacteria 2924710171 2924716910 197
88 iso_pu_bacteria 2924718760 2924721065 197
89 iso_pu_bacteria 2924733363 2924739411 197
90 iso_pu_bacteria 2924741084 2924741929 197
91 iso_pu_bacteria 2924754689 2924757329 197
92 iso_pu_bacteria 2924762789 2924764168 197
93 iso_pu_bacteria 2924776078 2924783807 197
94 iso_pu_bacteria 2937813078 2937816122 197
95 iso_pu_bacteria 2937822353 2937824786 197
96 iso_pu_bacteria 2937836603 2937838287 197
97 iso_pu_bacteria 2937848649 2937853585 197
98 iso_pu_bacteria 2937861824 2937863479 197
99 iso_pu_bacteria 2937877337 2937880507 197
100 iso_pu_bacteria 2937972304 2937975553 197
101 iso_pu_bacteria 2937980651 2937985436 197
102 iso_pu_bacteria 2937994558 2938001965 197
103 iso_pu_bacteria 2938014810 2938022526 197
104 iso_pu_bacteria 2958034702 2958035323 197
105 iso_pu_bacteria 2958041894 2958043509 197
106 iso_pu_bacteria 2958041894 2958054688 197
107 iso_pu_bacteria 2958064165 2958067726 197
108 iso_pu_bacteria 2958071322 2958072984 197
109 iso_pu_bacteria 2958084443 2958087641 197
110 iso_pu_bacteria 2958092219 2958099688 197
111 iso_pu_bacteria 2958100919 2958104279 197
112 iso_pu_bacteria 2958108152 2958114739 197
113 iso_pu_bacteria 2958130278 2958136235 197
114 iso_pu_bacteria 2958144490 2958147647 197
115 iso_pu_bacteria 2958165035 2958172020 197
116 iso_pu_bacteria 2958172287 2958178633 197
117 iso_pu_bacteria 2958179912 2958185703 197
118 iso_pu_bacteria 2961077736 2961084080 197
119 iso_pu_bacteria 2961114664 2961116316 197
120 iso_pu_bacteria 2961163497 2961170466 197
121 iso_pu_bacteria 2961183825 2961184631 197
122 iso_pu_bacteria 2963644680 2963648033 197
123 iso_pu_bacteria 2965018300 2965025212 197
124 iso_pu_bacteria 2965062239 2965063159 197
125 iso_pu_bacteria 2965119406 2965126738 197
126 iso_pu_bacteria 2968016561 2968018132 197
127 iso_pu_bacteria 2968083720 2968090855 197
128 iso_pu_bacteria 2968110612 2968112222 197
129 iso_pu_bacteria 2968117919 2968120986 197
130 iso_pu_bacteria 2968128360 2968132590 197
131 iso_pu_bacteria 2968171901 2968178853 197
132 iso_pu_bacteria 2970469710 2970471694 197
133 iso_pu_bacteria 2970510686 2970512256 197
134 iso_pu_bacteria 2970524798 2970530620 197
135 iso_pu_bacteria 2970532167 2970535597 197
136 iso_pu_bacteria 2970540015 2970540876 197
137 iso_pu_bacteria 2970554993 2970561698 197
138 iso_pu_bacteria 2970593180 2970593778 197
139 iso_pu_bacteria 2970619444 2970622965 197
140 iso_pu_bacteria 2977843712 2977846358 197
141 iso_pu_bacteria 2977851361 2977852826 197
142 iso_pu_bacteria 2977864932 2977868990 197
143 iso_pu_bacteria 2977922695 2977927375 197
144 iso_pu_bacteria 2977971508 2977978390 197
145 iso_pu_bacteria 2977986579 2977991786 197
146 iso_pu_bacteria 2979710463 2979715000 197
147 iso_pu_bacteria 2979742915 2979743588 197
148 iso_pu_bacteria 2979764755 2979769857 197
149 iso_pu_bacteria 2987636660 2987637965 197
150 iso_pu_bacteria 2987652177 2987652230 197
151 iso_pu_bacteria 2987659509 2987666707 197
152 iso_pu_bacteria 2987666974 2987668926 197
153 iso_pu_bacteria 2996348954 2996350479 197
154 iso_pu_bacteria 2996386984 2996392452 197
155 iso_pu_bacteria 3004188549 3004195709 197
156 iso_pu_bacteria 3004203850 3004205713 197
157 iso_pu_bacteria 3004211236 3004216275 197
158 iso_pu_bacteria 3004218560 3004224025 197
159 iso_pu_bacteria 3004232784 3004235640 197
160 iso_pu_bacteria 3004248173 3004250915 197
161 iso_pu_bacteria 3004275668 3004277177 197
162 iso_pu_bacteria 3004289098 3004295146 197
163 iso_pu_bacteria 637000159 637074287 197
164 iso_pu_bacteria 8004312739 8004316235 197
165 iso_pu_bacteria 8004387939 8004394437 197
166 iso_pu_bacteria 8004395343 8004396402 197
167 iso_pu_bacteria 8004633249 8004636683 197
168 iso_pu_bacteria 8004640170 8004640507 197
169 iso_pu_bacteria 8004714634 8004720836 197
170 iso_pu_bacteria 8004727605 8004728555 197
171 iso_pu_bacteria 8055617313 8055621066 197
172 3300049569 Ga0501032_0070076 Ga0501032_0070076_1021_1626 199
173 3300049570 Ga0501033_0023316 Ga0501033_0023316_2692_3297 199
174 3300049571 Ga0501034_0107696 Ga0501034_0107696_2082_2687 199
175 3300049581 Ga0501047_0055654 Ga0501047_0055654_902_1507 199
176 3300049822 Ga0501035_0024921 Ga0501035_0024921_805_1410 199
177 3300003214 JGI25165J46597_1000062 JGI25165J46597_1000062167 201
178 3300005339 Ga0070660_100137199 Ga0070660_1001371992 201
179 3300005459 Ga0068867_100450116 Ga0068867_1004501161 201
180 3300005563 Ga0068855_100321626 Ga0068855_1003216262 201
181 3300005577 Ga0068857_100100712 Ga0068857_1001007122 201
182 3300005614 Ga0068856_100338164 Ga0068856_1003381642 201
183 3300006038 Ga0075365_10001521 Ga0075365_1000152111 201
184 3300006048 Ga0075363_100003906 Ga0075363_1000039065 201
185 3300006048 Ga0075363_100126201 Ga0075363_1001262012 201
186 3300006051 Ga0075364_10056146 Ga0075364_100561462 201
187 3300006178 Ga0075367_10050215 Ga0075367_100502152 201
188 3300006178 Ga0075367_10135825 Ga0075367_101358252 201
189 3300006353 Ga0075370_10023779 Ga0075370_100237792 201
190 3300009093 Ga0105240_10911568 Ga0105240_109115681 201
191 3300009174 Ga0105241_10137197 Ga0105241_101371972 201
192 3300009545 Ga0105237_10211812 Ga0105237_102118122 201
193 3300009551 Ga0105238_10003791 Ga0105238_1000379110 201
194 3300009553 Ga0105249_10281255 Ga0105249_102812552 201
195 3300010375 Ga0105239_10012234 Ga0105239_1001223410 201
196 3300010375 Ga0105239_10041578 Ga0105239_100415786 201
197 3300010375 Ga0105239_11066307 Ga0105239_110663071 201
198 3300010375 Ga0105239_11108243 Ga0105239_111082431 201
199 3300011119 Ga0105246_10132780 Ga0105246_101327802 201
200 3300025261 Ga0209233_1000129 Ga0209233_100012926 201
201 3300025297 Ga0209758_1006029 Ga0209758_10060293 201
202 3300025904 Ga0207647_10052402 Ga0207647_100524022 201
203 3300025914 Ga0207671_10330336 Ga0207671_103303362 201
204 3300025914 Ga0207671_10364616 Ga0207671_103646161 201
205 3300025919 Ga0207657_10088011 Ga0207657_100880112 201
206 3300025924 Ga0207694_10007136 Ga0207694_100071364 201
207 3300026041 Ga0207639_10010467 Ga0207639_100104674 201
208 3300026078 Ga0207702_10064589 Ga0207702_100645893 201
209 3300026078 Ga0207702_10145699 Ga0207702_101456992 201
210 3300026089 Ga0207648_10069436 Ga0207648_100694363 201
211 3300026116 Ga0207674_10099357 Ga0207674_100993572 201
212 3300037312 Ga0395899_0354768 Ga0395899_0354768_310_927 201
213 3300037312 Ga0395899_0641749 Ga0395899_0641749_49_654 201
214 3300037418 Ga0395900_0249597 Ga0395900_0249597_549_1166 201
215 3300037466 Ga0395898_0116020 Ga0395898_0116020_1343_1948 201
216 3300037471 Ga0395905_0195109 Ga0395905_0195109_98_703 201
217 3300038443 Ga0395901_0032694 Ga0395901_0032694_4438_5055 201
218 3300038443 Ga0395901_0274634 Ga0395901_0274634_951_1568 201
219 3300038443 Ga0395901_0415631 Ga0395901_0415631_66_680 201
220 3300038443 Ga0395901_0987951 Ga0395901_0987951_151_756 201
221 3300044658 Ga0466972_0015966 Ga0466972_0015966_544_1149 201
222 3300044901 Ga0466960_0193260 Ga0466960_0193260_406_1011 201
223 3300046512 Ga0495610_0051027 Ga0495610_0051027_661_1293 201
224 3300046522 Ga0495643_0086420 Ga0495643_0086420_515_1147 201
225 3300047472 Ga0495686_0275978 Ga0495686_0275978_293_925 201
226 3300048905 Ga0496102_0369050 Ga0496102_0369050_348_962 201
227 3300048915 Ga0496112_0328080 Ga0496112_0328080_140_757 201
228 3300048916 Ga0496113_0513618 Ga0496113_0513618_243_857 201
229 3300048918 Ga0496115_0398376 Ga0496115_0398376_207_821 201
230 3300048922 Ga0496119_0104986 Ga0496119_0104986_53_667 201
231 3300048922 Ga0496119_0116300 Ga0496119_0116300_78_695 201
232 3300048923 Ga0496120_0008154 Ga0496120_0008154_6972_7589 201
233 3300048927 Ga0496124_0481165 Ga0496124_0481165_40_654 201
234 3300048928 Ga0496125_0086661 Ga0496125_0086661_323_937 201
235 3300048929 Ga0496126_0102499 Ga0496126_0102499_1535_2149 201
236 3300048929 Ga0496126_0545268 Ga0496126_0545268_293_907 201
237 3300049570 Ga0501033_0387877 Ga0501033_0387877_68_682 201
238 3300050489 nmdc:mga03683_67831_c2 nmdc:mga03683_67831_c2_136_744 201
239 3300050489 nmdc:mga03683_74063_c1 nmdc:mga03683_74063_c1_283_897 201
240 3300050490 nmdc:mga03n38_28035_c2 nmdc:mga03n38_28035_c2_425_1039 201
241 3300050490 nmdc:mga03n38_6027_c1 nmdc:mga03n38_6027_c1_1014_1628 201
242 3300050491 nmdc:mga00v17_3640_c1 nmdc:mga00v17_3640_c1_6541_7155 201
243 3300050492 nmdc:mga0yw44_244996_c1 nmdc:mga0yw44_244996_c1_353_967 201
244 3300050492 nmdc:mga0yw44_777_c1 nmdc:mga0yw44_777_c1_8883_9497 201
245 3300050492 nmdc:mga0yw44_99077_c1 nmdc:mga0yw44_99077_c1_540_1154 201
246 3300050496 nmdc:mga07m45_38564_c2 nmdc:mga07m45_38564_c2_701_1315 201
247 3300053079 Ga0500610_0006143 Ga0500610_0006143_411_1043 201
248 3300053087 Ga0500643_028030 Ga0500643_028030_351_965 201
249 3300053134 Ga0500658_0080742 Ga0500658_0080742_232_864 201
250 3300053155 Ga0500620_092726 Ga0500620_092726_351_983 201
251 iso_pu_bacteria 2508501127 2509145666 201
252 iso_pu_bacteria 2597489875 2597813448 201

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16867

DMSP_lyase

Dimethlysulfonioproprionate lyase

57

203

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5jsp-assembly1.cif.gz_A new mechanistic insight from substrate and product bound structures of the metal-dependent dimethylsulfoniopropionate lyase dddq 0.928 5 196
4b29-assembly1.cif.gz_A crystal structures of dmsp lyases rddddp and rndddqii 0.9194 4 197
5jsp-assembly1.cif.gz_A new mechanistic insight from substrate and product bound structures of the metal-dependent dimethylsulfoniopropionate lyase dddq 0.9097 5 196
5cu1-assembly1.cif.gz_A crystal structure of dmsp lyase dddq from ruegeria pomeroyi dss-3 0.9043 4 201
2d40-assembly1.cif.gz_B crystal structure of z3393 from escherichia coli o157:h7 0.9006 111 185
ID Description Score Start End Superfamily
5jspB00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9245 5 196 2.60.120.10
4b29A00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9194 4 197 2.60.120.10
5jspB00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9106 5 196 2.60.120.10
5cu1A00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9043 4 201 2.60.120.10
af_Q8CD15_27_263_2.60.120.650 Mainly Beta;Sandwich;Jelly Rolls;Cupin 0.8986 112 185 2.60.120.650
ID Description Score Start End GO Terms
AF-A0A531KBX3-F1-model_v4 Transcriptional regulator 0.995 42 184 GO:0047869
AF-A0A7R7E8E3-F1-model_v4 Dimethlysulfonioproprionate lyase DddQ 0.9933 1 196 GO:0047869
AF-A0A5R2N4C4-F1-model_v4 Transcriptional regulator 0.9926 59 176 GO:0047869
AF-A0A529XGE3-F1-model_v4 Transcriptional regulator 0.9899 1 167 GO:0047869
AF-A0A531KBX3-F1-model_v4 Transcriptional regulator 0.9881 42 184 GO:0047869

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pLDDT pTM Quality
91.12 0.88 High
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Predicted Structure (AlphaFold2)

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