F363503

General Info

Members Datasets Scaffolds Average Seq Length
252 144 504 436

Family's Representative Sequence

Representative Sequence 3300046559|Ga0495667_0078374|Ga0495667_0078374_463_1896
Length 477
Sequence MGFVQGEGRTQGTLFPVTLEELIPDDHVCRVIDAFVARLDMAGLGFERAEAAETGRPGYDPRDLLKLYLYGYLHQIRSSRRLESECRRNIELMWLLGRLAPDHKTIAEFRRMHREGVTAAGAELVQLARSVGLVKGEWIAIDGSKFQAVSSARSVREREALERYLEQLERSDEQDEVVIDSSAVASALEKLRQHPEPEVGFMRTTQGFIPAYNMQAAVDAEHALIVAQQVTDQAADNRSLQPMAEAAKAAVGGPTQTLNVVADAGYSNGEQAEACETKGILPHVPANRGVNNHGGGTLFDRTEFTYQPESDTLLCPAGQTLTRKQLSRKDRAVLYAAQPEVCGACSLKPQCTVSPRRMITRHLHEEALQRMQQRATPEAMRLRRSTVEHPFANLKYRIFGHPRFLLRGLRGAQTEISLGVAAYNLKRMRNILGGQPTDFHTTNRLKQAESRPAFTKREKRRSGTRNVAFPSILPSVS

Samples

Sample ID Description Type Environment
1 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
25 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
43 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
44 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
62 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
63 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
64 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
68 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
69 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
70 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
71 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
72 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
73 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
74 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
75 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
76 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
77 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
78 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
79 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
80 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
81 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
82 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
83 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
84 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
85 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
86 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
87 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
88 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
89 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
90 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
92 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
96 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
97 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
98 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
101 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
102 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
103 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
104 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
105 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
106 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
110 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
111 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
112 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
113 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
114 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
115 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
118 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
119 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
120 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
121 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
122 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
123 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
124 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
125 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
126 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
129 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
132 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
133 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
134 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
135 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
138 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
139 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
140 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
141 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
142 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
143 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
144 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.6
Metatranscriptomes 0.4
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.4
Nodule 0
Rhizoplane 0.79
Rhizosphere 97.62
Stem 0
Stem Tuber 0
Unclassified 38.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495667_0078374 3300046559 Bacteria 2148
2 rootH2_10027739 3300003320 Bacteria 20912
3 Ga0070683_100299370 3300005329 Bacteria 1530
4 Ga0070680_100187059 3300005336 Bacteria 1745
5 Ga0070709_10047108 3300005434 Bacteria 2684
6 Ga0070709_10079256 3300005434 Unclassified 2139
7 Ga0070709_10136625 3300005434 Bacteria 1680
8 Ga0070709_10138914 3300005434 Bacteria 1667
9 Ga0070709_10152492 3300005434 Bacteria 1598
10 Ga0070709_10158603 3300005434 Unclassified 1571
11 Ga0070714_100159082 3300005435 Bacteria 2042
12 Ga0070714_100290469 3300005435 Unclassified 1521
13 Ga0070713_100144106 3300005436 Unclassified 2113
14 Ga0070713_100238114 3300005436 Unclassified 1656
15 Ga0070713_100244824 3300005436 Unclassified 1634
16 Ga0070713_100277255 3300005436 Bacteria 1537
17 Ga0070713_100285096 3300005436 Unclassified 1516
18 Ga0070710_10019111 3300005437 Bacteria 3537
19 Ga0070710_10073101 3300005437 Bacteria 1981
20 Ga0070711_100087618 3300005439 Unclassified 2236
21 Ga0070711_100109245 3300005439 Bacteria 2027
22 Ga0070711_100112252 3300005439 Bacteria 2002
23 Ga0070711_100121503 3300005439 Unclassified 1932
24 Ga0070711_100151661 3300005439 Bacteria 1748
25 Ga0070705_100130942 3300005440 Bacteria 1636
26 Ga0070708_100058682 3300005445 Bacteria 3429
27 Ga0070708_100242056 3300005445 Unclassified 1694
28 Ga0070681_10249864 3300005458 Bacteria 1686
29 Ga0070706_100231658 3300005467 Unclassified 1724
30 Ga0070707_100116709 3300005468 Bacteria 2590
31 Ga0070707_100132517 3300005468 Unclassified 2424
32 Ga0070698_100178042 3300005471 Bacteria 2065
33 Ga0070679_100280446 3300005530 Bacteria 1619
34 Ga0070697_100184862 3300005536 Unclassified 1767
35 Ga0068853_100179498 3300005539 Bacteria 1919
36 Ga0070696_100098742 3300005546 Bacteria 2089
37 Ga0070693_100093202 3300005547 Bacteria 1820
38 Ga0068856_100141388 3300005614 Bacteria 2414
39 Ga0068866_10098117 3300005718 Bacteria 1610
40 Ga0070717_10079911 3300006028 Unclassified 2743
41 Ga0070717_10178864 3300006028 Unclassified 1848
42 Ga0070717_10197282 3300006028 Bacteria 1761
43 Ga0070715_10010761 3300006163 Bacteria 3271
44 Ga0070715_10037143 3300006163 Bacteria 2014
45 Ga0070715_10078027 3300006163 Bacteria 1496
46 Ga0070716_100055173 3300006173 Bacteria 2273
47 Ga0070716_100098279 3300006173 Unclassified 1788
48 Ga0070716_100105834 3300006173 Bacteria 1734
49 Ga0070716_100107907 3300006173 Unclassified 1719
50 Ga0070716_100110318 3300006173 Unclassified 1704
51 Ga0070716_100145796 3300006173 Unclassified 1516
52 Ga0070712_100034011 3300006175 Bacteria 3453
53 Ga0070712_100047370 3300006175 Bacteria 2975
54 Ga0070712_100146050 3300006175 Unclassified 1810
55 Ga0070712_100151696 3300006175 Unclassified 1780
56 Ga0070712_100217536 3300006175 Unclassified 1510
57 Ga0075433_10177240 3300006852 Unclassified 1897
58 Ga0075433_10262137 3300006852 Unclassified 1532
59 Ga0075434_100057232 3300006871 Bacteria 3874
60 Ga0075434_100176256 3300006871 Unclassified 2158
61 Ga0075436_100016529 3300006914 Bacteria 5051
62 Ga0075436_100068835 3300006914 Unclassified 2445
63 Ga0075436_100079968 3300006914 Bacteria 2264
64 Ga0075435_100078571 3300007076 Unclassified 2706
65 Ga0075435_100114927 3300007076 Unclassified 2240
66 Ga0099794_10045618 3300007265 Bacteria 2097
67 Ga0099794_10072064 3300007265 Bacteria 1693
68 Ga0105240_10243568 3300009093 Bacteria 2083
69 Ga0105245_10015895 3300009098 Bacteria 6557
70 Ga0105242_10196724 3300009176 Bacteria 1788
71 Ga0105248_10303525 3300009177 Bacteria 1798
72 Ga0105238_10213226 3300009551 Bacteria 1907
73 Ga0105239_10180957 3300010375 Bacteria 2359
74 Ga0157370_10008842 3300013104 Bacteria 10826
75 Ga0157374_10180403 3300013296 Bacteria 2062
76 Ga0157374_10224427 3300013296 Bacteria 1844
77 Ga0157378_10185744 3300013297 Unclassified 1958
78 Ga0157375_10248543 3300013308 Unclassified 1939
79 Ga0224572_1009919 3300024225 Bacteria 1783
80 Ga0228598_1011667 3300024227 Bacteria 1747
81 Ga0207692_10079041 3300025898 Unclassified 1754
82 Ga0207642_10047409 3300025899 Bacteria 1921
83 Ga0207685_10043642 3300025905 Bacteria 1691
84 Ga0207685_10051482 3300025905 Bacteria 1591
85 Ga0207685_10053915 3300025905 Unclassified 1564
86 Ga0207685_10066700 3300025905 Bacteria 1445
87 Ga0207699_10110600 3300025906 Unclassified 1760
88 Ga0207699_10147623 3300025906 Unclassified 1552
89 Ga0207699_10149671 3300025906 Unclassified 1543
90 Ga0207684_10193806 3300025910 Unclassified 1753
91 Ga0207695_10209830 3300025913 Bacteria 1859
92 Ga0207693_10037810 3300025915 Bacteria 3803
93 Ga0207693_10092902 3300025915 Bacteria 2365
94 Ga0207693_10102351 3300025915 Bacteria 2246
95 Ga0207693_10141800 3300025915 Bacteria 1889
96 Ga0207663_10041491 3300025916 Unclassified 2804
97 Ga0207663_10110478 3300025916 Bacteria 1864
98 Ga0207663_10148353 3300025916 Bacteria 1642
99 Ga0207663_10152478 3300025916 Bacteria 1622
100 Ga0207663_10171795 3300025916 Unclassified 1540
101 Ga0207660_10151488 3300025917 Bacteria 1782
102 Ga0207646_10021677 3300025922 Bacteria 5931
103 Ga0207646_10115822 3300025922 Unclassified 2407
104 Ga0207687_10047275 3300025927 Bacteria 2982
105 Ga0207700_10047321 3300025928 Bacteria 3187
106 Ga0207700_10200243 3300025928 Unclassified 1682
107 Ga0207700_10212691 3300025928 Unclassified 1636
108 Ga0207664_10156544 3300025929 Unclassified 1940
109 Ga0207664_10228780 3300025929 Bacteria 1615
110 Ga0207686_10084369 3300025934 Bacteria 2081
111 Ga0207665_10021096 3300025939 Unclassified 4281
112 Ga0207665_10058021 3300025939 Unclassified 2616
113 Ga0207665_10083880 3300025939 Bacteria 2198
114 Ga0207665_10100671 3300025939 Bacteria 2017
115 Ga0207665_10135131 3300025939 Unclassified 1754
116 Ga0207665_10183616 3300025939 Unclassified 1516
117 Ga0207661_10229088 3300025944 Bacteria 1645
118 Ga0209588_1010050 3300027671 Bacteria 2839
119 Ga0209588_1013032 3300027671 Bacteria 2532
120 Ga0209588_1042243 3300027671 Bacteria 1473
121 Ga0265337_1029762 3300028556 Unclassified 1631
122 Ga0265326_10025025 3300028558 Unclassified 1702
123 Ga0265334_10016012 3300028573 Unclassified 3105
124 Ga0265336_10011086 3300028666 Unclassified 3071
125 Ga0265338_10004014 3300028800 Bacteria 20200
126 Ga0265338_10005735 3300028800 Bacteria 16058
127 Ga0265338_10070576 3300028800 Bacteria 2994
128 Ga0265338_10188494 3300028800 Bacteria 1565
129 Ga0265760_10019838 3300031090 Bacteria 1938
130 Ga0265330_10001744 3300031235 Bacteria 12241
131 Ga0265330_10062134 3300031235 Unclassified 1624
132 Ga0265328_10019431 3300031239 Bacteria 2609
133 Ga0265328_10039711 3300031239 Unclassified 1735
134 Ga0265320_10040882 3300031240 Unclassified 2308
135 Ga0265329_10013021 3300031242 Unclassified 2975
136 Ga0265340_10016653 3300031247 Bacteria 3804
137 Ga0265340_10035761 3300031247 Bacteria 2466
138 Ga0265340_10079589 3300031247 Bacteria 1544
139 Ga0265339_10003788 3300031249 Bacteria 10522
140 Ga0265331_10008220 3300031250 Bacteria 5951
141 Ga0265316_10129689 3300031344 Unclassified 1900
142 Ga0265316_10177313 3300031344 Bacteria 1587
143 Ga0307509_10177491 3300031507 Unclassified 2000
144 Ga0265313_10004586 3300031595 Bacteria 10511
145 Ga0265314_10067741 3300031711 Unclassified 2402
146 Ga0265314_10112823 3300031711 Unclassified 1724
147 Ga0265342_10045193 3300031712 Unclassified 2652
148 Ga0307510_10164201 3300033180 Bacteria 1812
149 Ga0373936_0059324 3300035113 Bacteria 1559
150 Ga0373954_0087378 3300035118 Unclassified 1494
151 Ga0373956_0007043 3300035119 Bacteria 4523
152 Ga0373956_0063394 3300035119 Unclassified 1676
153 Ga0373957_0022686 3300035120 Bacteria 2238
154 Ga0373957_0045002 3300035120 Bacteria 1671
155 Ga0373955_0021571 3300035172 Unclassified 3254
156 Ga0373955_0037674 3300035172 Unclassified 2572
157 Ga0373955_0123330 3300035172 Unclassified 1507
158 Ga0373924_0053949 3300035410 Unclassified 1670
159 Ga0373935_0056547 3300035692 Unclassified 2501
160 Ga0373935_0141513 3300035692 Bacteria 1625
161 Ga0373927_0080169 3300035695 Bacteria 2115
162 Ga0373927_0104548 3300035695 Bacteria 1843
163 Ga0373933_0082241 3300035724 Bacteria 1976
164 Ga0373933_0120077 3300035724 Bacteria 1645
165 Ga0373933_0148703 3300035724 Bacteria 1482
166 Ga0373947_0020188 3300035725 Unclassified 3845
167 Ga0373947_0088275 3300035725 Bacteria 1930
168 Ga0373947_0117873 3300035725 Bacteria 1684
169 Ga0373937_0111916 3300036401 Bacteria 2539
170 Ga0373937_0204126 3300036401 Bacteria 1858
171 Ga0373937_0235967 3300036401 Bacteria 1722
172 Ga0373925_0031907 3300037068 Unclassified 3875
173 Ga0373925_0168617 3300037068 Bacteria 1727
174 Ga0373925_0176444 3300037068 Unclassified 1689
175 Ga0436361_0318143 3300039447 Bacteria 3039
176 Ga0436361_0371263 3300039447 Unclassified 1889
177 Ga0466959_0162025 3300045049 Unclassified 1572
178 Ga0466959_0163338 3300045049 Bacteria 1565
179 Ga0466967_0314414 3300045976 Bacteria 1509
180 Ga0495592_0071441 3300046454 Bacteria 2526
181 Ga0495592_0105766 3300046454 Bacteria 1998
182 Ga0495629_0123261 3300046459 Bacteria 1805
183 Ga0495651_0149758 3300046462 Unclassified 1683
184 Ga0495653_0078124 3300046463 Bacteria 2455
185 Ga0495580_0000200 3300046472 Bacteria 45956
186 Ga0495580_0059173 3300046472 Unclassified 2692
187 Ga0495580_0192014 3300046472 Bacteria 1408
188 Ga0495582_0005944 3300046473 Bacteria 6805
189 Ga0495639_0065132 3300046475 Bacteria 1676
190 Ga0495639_0075674 3300046475 Bacteria 1561
191 Ga0495662_0071981 3300046476 Bacteria 1675
192 Ga0495664_0045049 3300046477 Bacteria 2615
193 Ga0495664_0049276 3300046477 Bacteria 2500
194 Ga0495594_0088227 3300046499 Bacteria 1736
195 Ga0495608_0135718 3300046511 Unclassified 1572
196 Ga0495618_0053579 3300046514 Bacteria 2550
197 Ga0495618_0098710 3300046514 Bacteria 1868
198 Ga0495628_0052547 3300046516 Unclassified 3218
199 Ga0495628_0192697 3300046516 Bacteria 1538
200 Ga0495630_0137112 3300046517 Bacteria 1859
201 Ga0495630_0161437 3300046517 Unclassified 1706
202 Ga0495652_0115040 3300046529 Bacteria 2156
203 Ga0495652_0150438 3300046529 Bacteria 1819
204 Ga0495665_0058400 3300046531 Unclassified 2037
205 Ga0495665_0068498 3300046531 Bacteria 1871
206 Ga0495640_0084396 3300046533 Unclassified 2106
207 Ga0495640_0130417 3300046533 Bacteria 1627
208 Ga0495586_0069553 3300046535 Unclassified 1921
209 Ga0495587_0058642 3300046536 Bacteria 2261
210 Ga0495645_0071253 3300046543 Bacteria 2506
211 Ga0495634_0111743 3300046642 Bacteria 1756
212 Ga0495635_0036205 3300046663 Unclassified 3421
213 Ga0495635_0132607 3300046663 Unclassified 1698
214 Ga0495599_0084315 3300046678 Bacteria 1984
215 Ga0495599_0107730 3300046678 Bacteria 1736
216 Ga0495599_0110261 3300046678 Unclassified 1714
217 Ga0495623_0125331 3300046679 Unclassified 1542
218 Ga0495646_0071852 3300046680 Bacteria 2035
219 Ga0495646_0073187 3300046680 Bacteria 2013
220 Ga0495658_0061286 3300046683 Unclassified 2159
221 Ga0495669_0053260 3300046684 Bacteria 1819
222 Ga0495613_0055455 3300046689 Unclassified 2912
223 Ga0495624_0134139 3300046690 Bacteria 1517
224 Ga0495600_0052525 3300046809 Bacteria 2661
225 Ga0495581_0129846 3300047315 Unclassified 1468
226 Ga0495604_0074102 3300047317 Bacteria 2567
227 Ga0495674_0113017 3300047319 Bacteria 2300
228 Ga0495680_0032835 3300047322 Unclassified 4208
229 Ga0495675_0097481 3300047444 Bacteria 1842
230 Ga0495684_0087356 3300047471 Bacteria 2363
231 Ga0495684_0175928 3300047471 Bacteria 1589
232 Ga0495593_0065609 3300047673 Bacteria 1893
233 Ga0495602_0165300 3300048088 Bacteria 1723
234 Ga0495602_0181268 3300048088 Bacteria 1624
235 Ga0496111_0304572 3300048914 Bacteria 1181
236 Ga0496114_0209838 3300048917 Bacteria 1708
237 Ga0501225_0008197 3300049705 Unclassified 3005
238 nmdc:mga0n895_216967_c1 3300050512 Unclassified 1943
239 nmdc:mga0n895_317936_c1 3300050512 Unclassified 1578
240 nmdc:mga0rr50_19888_c1 3300050513 Unclassified 4544
241 nmdc:mga0rr50_70488_c1 3300050513 Unclassified 2664
242 nmdc:mga08x19_32403_c1 3300050514 Bacteria 3293
243 nmdc:mga08x19_66947_c1 3300050514 Unclassified 2336
244 nmdc:mga08x19_81587_c1 3300050514 Bacteria 2124
245 nmdc:mga0a205_206989_c1 3300050515 Unclassified 1851
246 nmdc:mga0a205_260542_c1 3300050515 Unclassified 1612
247 Ga0495601_0148944 3300053077 Bacteria 1527
248 Ga0495612_0015883 3300053078 Bacteria 3017
249 Ga0495612_0044953 3300053078 Bacteria 1807
250 Ga0495595_0043938 3300053084 Bacteria 2051
251 Ga0495619_0093759 3300053085 Unclassified 2035
252 Ga0500661_008685 3300055283 Bacteria 1868
253 Ga0495667_0078374
254 rootH2_10027739
255 Ga0070683_100299370
256 Ga0070680_100187059
257 Ga0070709_10047108
258 Ga0070709_10079256
259 Ga0070709_10136625
260 Ga0070709_10138914
261 Ga0070709_10152492
262 Ga0070709_10158603
263 Ga0070714_100159082
264 Ga0070714_100290469
265 Ga0070713_100144106
266 Ga0070713_100238114
267 Ga0070713_100244824
268 Ga0070713_100277255
269 Ga0070713_100285096
270 Ga0070710_10019111
271 Ga0070710_10073101
272 Ga0070711_100087618
273 Ga0070711_100109245
274 Ga0070711_100112252
275 Ga0070711_100121503
276 Ga0070711_100151661
277 Ga0070705_100130942
278 Ga0070708_100058682
279 Ga0070708_100242056
280 Ga0070681_10249864
281 Ga0070706_100231658
282 Ga0070707_100116709
283 Ga0070707_100132517
284 Ga0070698_100178042
285 Ga0070679_100280446
286 Ga0070697_100184862
287 Ga0068853_100179498
288 Ga0070696_100098742
289 Ga0070693_100093202
290 Ga0068856_100141388
291 Ga0068866_10098117
292 Ga0070717_10079911
293 Ga0070717_10178864
294 Ga0070717_10197282
295 Ga0070715_10010761
296 Ga0070715_10037143
297 Ga0070715_10078027
298 Ga0070716_100055173
299 Ga0070716_100098279
300 Ga0070716_100105834
301 Ga0070716_100107907
302 Ga0070716_100110318
303 Ga0070716_100145796
304 Ga0070712_100034011
305 Ga0070712_100047370
306 Ga0070712_100146050
307 Ga0070712_100151696
308 Ga0070712_100217536
309 Ga0075433_10177240
310 Ga0075433_10262137
311 Ga0075434_100057232
312 Ga0075434_100176256
313 Ga0075436_100016529
314 Ga0075436_100068835
315 Ga0075436_100079968
316 Ga0075435_100078571
317 Ga0075435_100114927
318 Ga0099794_10045618
319 Ga0099794_10072064
320 Ga0105240_10243568
321 Ga0105245_10015895
322 Ga0105242_10196724
323 Ga0105248_10303525
324 Ga0105238_10213226
325 Ga0105239_10180957
326 Ga0157370_10008842
327 Ga0157374_10180403
328 Ga0157374_10224427
329 Ga0157378_10185744
330 Ga0157375_10248543
331 Ga0224572_1009919
332 Ga0228598_1011667
333 Ga0207692_10079041
334 Ga0207642_10047409
335 Ga0207685_10043642
336 Ga0207685_10051482
337 Ga0207685_10053915
338 Ga0207685_10066700
339 Ga0207699_10110600
340 Ga0207699_10147623
341 Ga0207699_10149671
342 Ga0207684_10193806
343 Ga0207695_10209830
344 Ga0207693_10037810
345 Ga0207693_10092902
346 Ga0207693_10102351
347 Ga0207693_10141800
348 Ga0207663_10041491
349 Ga0207663_10110478
350 Ga0207663_10148353
351 Ga0207663_10152478
352 Ga0207663_10171795
353 Ga0207660_10151488
354 Ga0207646_10021677
355 Ga0207646_10115822
356 Ga0207687_10047275
357 Ga0207700_10047321
358 Ga0207700_10200243
359 Ga0207700_10212691
360 Ga0207664_10156544
361 Ga0207664_10228780
362 Ga0207686_10084369
363 Ga0207665_10021096
364 Ga0207665_10058021
365 Ga0207665_10083880
366 Ga0207665_10100671
367 Ga0207665_10135131
368 Ga0207665_10183616
369 Ga0207661_10229088
370 Ga0209588_1010050
371 Ga0209588_1013032
372 Ga0209588_1042243
373 Ga0265337_1029762
374 Ga0265326_10025025
375 Ga0265334_10016012
376 Ga0265336_10011086
377 Ga0265338_10004014
378 Ga0265338_10005735
379 Ga0265338_10070576
380 Ga0265338_10188494
381 Ga0265760_10019838
382 Ga0265330_10001744
383 Ga0265330_10062134
384 Ga0265328_10019431
385 Ga0265328_10039711
386 Ga0265320_10040882
387 Ga0265329_10013021
388 Ga0265340_10016653
389 Ga0265340_10035761
390 Ga0265340_10079589
391 Ga0265339_10003788
392 Ga0265331_10008220
393 Ga0265316_10129689
394 Ga0265316_10177313
395 Ga0307509_10177491
396 Ga0265313_10004586
397 Ga0265314_10067741
398 Ga0265314_10112823
399 Ga0265342_10045193
400 Ga0307510_10164201
401 Ga0373936_0059324
402 Ga0373954_0087378
403 Ga0373956_0007043
404 Ga0373956_0063394
405 Ga0373957_0022686
406 Ga0373957_0045002
407 Ga0373955_0021571
408 Ga0373955_0037674
409 Ga0373955_0123330
410 Ga0373924_0053949
411 Ga0373935_0056547
412 Ga0373935_0141513
413 Ga0373927_0080169
414 Ga0373927_0104548
415 Ga0373933_0082241
416 Ga0373933_0120077
417 Ga0373933_0148703
418 Ga0373947_0020188
419 Ga0373947_0088275
420 Ga0373947_0117873
421 Ga0373937_0111916
422 Ga0373937_0204126
423 Ga0373937_0235967
424 Ga0373925_0031907
425 Ga0373925_0168617
426 Ga0373925_0176444
427 Ga0436361_0318143
428 Ga0436361_0371263
429 Ga0466959_0162025
430 Ga0466959_0163338
431 Ga0466967_0314414
432 Ga0495592_0071441
433 Ga0495592_0105766
434 Ga0495629_0123261
435 Ga0495651_0149758
436 Ga0495653_0078124
437 Ga0495580_0000200
438 Ga0495580_0059173
439 Ga0495580_0192014
440 Ga0495582_0005944
441 Ga0495639_0065132
442 Ga0495639_0075674
443 Ga0495662_0071981
444 Ga0495664_0045049
445 Ga0495664_0049276
446 Ga0495594_0088227
447 Ga0495608_0135718
448 Ga0495618_0053579
449 Ga0495618_0098710
450 Ga0495628_0052547
451 Ga0495628_0192697
452 Ga0495630_0137112
453 Ga0495630_0161437
454 Ga0495652_0115040
455 Ga0495652_0150438
456 Ga0495665_0058400
457 Ga0495665_0068498
458 Ga0495640_0084396
459 Ga0495640_0130417
460 Ga0495586_0069553
461 Ga0495587_0058642
462 Ga0495645_0071253
463 Ga0495634_0111743
464 Ga0495635_0036205
465 Ga0495635_0132607
466 Ga0495599_0084315
467 Ga0495599_0107730
468 Ga0495599_0110261
469 Ga0495623_0125331
470 Ga0495646_0071852
471 Ga0495646_0073187
472 Ga0495658_0061286
473 Ga0495669_0053260
474 Ga0495613_0055455
475 Ga0495624_0134139
476 Ga0495600_0052525
477 Ga0495581_0129846
478 Ga0495604_0074102
479 Ga0495674_0113017
480 Ga0495680_0032835
481 Ga0495675_0097481
482 Ga0495684_0087356
483 Ga0495684_0175928
484 Ga0495593_0065609
485 Ga0495602_0165300
486 Ga0495602_0181268
487 Ga0496111_0304572
488 Ga0496114_0209838
489 Ga0501225_0008197
490 nmdc:mga0n895_216967_c1
491 nmdc:mga0n895_317936_c1
492 nmdc:mga0rr50_19888_c1
493 nmdc:mga0rr50_70488_c1
494 nmdc:mga08x19_32403_c1
495 nmdc:mga08x19_66947_c1
496 nmdc:mga08x19_81587_c1
497 nmdc:mga0a205_206989_c1
498 nmdc:mga0a205_260542_c1
499 Ga0495601_0148944
500 Ga0495612_0015883
501 Ga0495612_0044953
502 Ga0495595_0043938
503 Ga0495619_0093759
504 Ga0500661_008685

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05598

DUF772

Transposase domain (DUF772)

55

125

0.94

PF13751

DDE_Tnp_1_6

Transposase DDE domain

314

429

0.82

PF01609

DDE_Tnp_1

Transposase DDE domain

171

425

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
5tsy-assembly1.cif.gz_A structure of the glycoside hydrolase domain of pela variant e218a from pseudomonas aeruginosa 0.7956 257 282
7bv8-assembly1.cif.gz_Z mature 50s ribosomal subunit from rrmj knock out e.coli strain 0.7855 149 192
6xz7-assembly1.cif.gz_Y e. coli 50s ribosomal subunit in complex with dirithromycin, fmet-phe-trna(phe) and deacylated trna(imet). 0.7784 149 192
8b0x-assembly1.cif.gz_x translating 70s ribosome in the unrotated state (p and e, trnas) 0.7764 149 192
1c1a-assembly1.cif.gz_B crystal structure of rsv two-domain integrase 0.763 213 284
ID Description Score Start End Superfamily
af_Q2FW68_1_95_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8158 212 284 3.30.420.10
af_I6X043_1_120_3.70.10.10 Alpha Beta;Box;Proliferating Cell Nuclear Antigen; 0.8117 233 289 3.70.10.10
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7907 210 284 3.30.420.10
af_P0CF56_119_291_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7591 136 287 3.30.420.10
af_P19769_115_278_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7531 211 287 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A1H8R0X5-F1-model_v4 Transposase DDE domain-containing protein 0.9553 196 287 GO:0003677
GO:0004803
GO:0006313
AF-A0A1F2WZN7-F1-model_v4 Transposase DDE domain-containing protein 0.9519 292 360
AF-A0A2V9X9Y5-F1-model_v4 IS5/IS1182 family transposase 0.9412 99 442 GO:0003677
GO:0004803
GO:0006313
AF-A0A2V9X9Y5-F1-model_v4 IS5/IS1182 family transposase 0.9334 99 442 GO:0003677
GO:0004803
GO:0006313
AF-A0A1V2DW95-F1-model_v4 Transposase DDE domain-containing protein 0.9296 212 442

Map