F363119

General Info

Members Datasets Scaffolds Average Seq Length
252 208 504 446

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10023179|Ga0081455_100231795
Length 525
Sequence MGLPDGNGTKPCDPRDVGRRSASHRHGQLTANWTTQFLAQASVGSSFWPHGRRGWDRFPLLAAQVITGPNLTAARSSCGSFMTLSITRPRITVLGTGYLGATHAICMAVLGYEVLGIDSDKQKIAALEEGRVPFYEPGLPEMLRKALDSGRLRFGTDIAEAAAFGDVHFVCVGTPQAKDSPAADLTYVNQVMTDLAQHLHRRCLVVGKSTVPVGTAVRLARLLHDTAPSGTDAELAWNPEFLREGFAVEDTMRPDRLVFGVESEWARSQLEAVFAPLLADGVPLVVTDLATAELVKVSANAFLATKISFINAMAEVCEVTGADVQALATALSHDPRIGGRFLRPGLGFGGGCLPKDIRAYIHRANELGVGQAVSFLREVDAINQRRRQRTVDLVRSQAGGALRDVPVCALGAAFKPDSDDIRDAPALDVARMLQEEGAIVRVYDPEAMDNARRAYPDLHYAGSVAEAAAGARVVALLTEWDQFRHIDPAWLGNIVEVRAIVDGRHALDPVAWRAADWDYRALGIS

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300003162 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003559 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_43 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300003579 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
77 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
78 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
79 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
80 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
81 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
82 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
83 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
84 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
85 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
86 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
87 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
91 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
92 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
93 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
94 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
95 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
96 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
97 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
98 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
99 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
100 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
101 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
102 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
103 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
104 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
105 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
106 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
110 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
111 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
112 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
113 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
114 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
115 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
116 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
117 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
118 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
119 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
120 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
121 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
122 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
123 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
126 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
127 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
128 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
129 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
130 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
131 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
132 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
133 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
134 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
135 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
136 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
137 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
138 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
139 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
140 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
141 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
142 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
143 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
150 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
151 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
152 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
153 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
167 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
168 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
169 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
170 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
175 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
176 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
177 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
178 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
179 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
180 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
181 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
182 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
183 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
184 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
185 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
186 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
187 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
188 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
189 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
190 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
191 2508501039 Frankia saprophytica CN3 Isolate Nodule
192 2517572101 Frankia sp. DC12 Isolate Nodule
193 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
194 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
195 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
196 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
197 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
198 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
199 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
200 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
201 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
202 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
203 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
204 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
205 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
206 8002775197 Frankia nepalensis CN7 Isolate Nodule
207 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
208 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.27
Metatranscriptomes 1.19
Isolates 7.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.37
Nodule 1.98
Rhizoplane 3.97
Rhizosphere 79.37
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10023179 3300005937 Bacteria 5782
2 Ga0006778J45830_1017092 3300003162 Bacteria 2070
3 Ga0007427J51700_121904 3300003559 Bacteria 1708
4 Ga0007429J51699_1020322 3300003579 Bacteria 1662
5 Ga0070690_100121850 3300005330 Bacteria 1751
6 Ga0068869_100003443 3300005334 Bacteria 9677
7 Ga0070680_100111987 3300005336 Bacteria 2272
8 Ga0070682_100003107 3300005337 Bacteria 9200
9 Ga0070689_100114604 3300005340 Bacteria 2148
10 Ga0070691_10030234 3300005341 Bacteria 2536
11 Ga0070661_100011097 3300005344 Bacteria 6274
12 Ga0070671_100006661 3300005355 Bacteria 9236
13 Ga0070673_100040061 3300005364 Bacteria 3591
14 Ga0070667_100003678 3300005367 Bacteria 13059
15 Ga0070713_100033249 3300005436 Bacteria 4129
16 Ga0070663_100002235 3300005455 Bacteria 10838
17 Ga0070678_100014341 3300005456 Bacteria 4997
18 Ga0070706_100008105 3300005467 Bacteria 9797
19 Ga0070706_100032959 3300005467 Bacteria 4779
20 Ga0070707_100003824 3300005468 Bacteria 14192
21 Ga0070707_100074021 3300005468 Bacteria 3284
22 Ga0070698_100178963 3300005471 Bacteria 2059
23 Ga0070672_100049435 3300005543 Bacteria 3271
24 Ga0070665_100319206 3300005548 Bacteria 1558
25 Ga0068855_100114460 3300005563 Bacteria 3092
26 Ga0068856_100016690 3300005614 Bacteria 7111
27 Ga0070702_100002984 3300005615 Bacteria 7477
28 Ga0068852_100004880 3300005616 Bacteria 9524
29 Ga0068864_100169394 3300005618 Bacteria 1990
30 Ga0081455_10004069 3300005937 Bacteria 16563
31 Ga0081540_1037397 3300005983 Bacteria 2574
32 Ga0070717_10008838 3300006028 Bacteria 7546
33 Ga0075432_10036486 3300006058 Bacteria 1709
34 Ga0097621_100093840 3300006237 Bacteria 2515
35 Ga0075428_100007927 3300006844 Bacteria 11778
36 Ga0075428_100115223 3300006844 Bacteria 2928
37 Ga0075433_10002124 3300006852 Bacteria 15023
38 Ga0075433_10070284 3300006852 Bacteria 3076
39 Ga0075434_100092101 3300006871 Bacteria 3033
40 Ga0075434_100117351 3300006871 Bacteria 2674
41 Ga0111539_10084969 3300009094 Bacteria 3720
42 Ga0105245_10169484 3300009098 Bacteria 2078
43 Ga0105247_10004342 3300009101 Bacteria 9060
44 Ga0114129_10004061 3300009147 Bacteria 20662
45 Ga0105243_10068956 3300009148 Bacteria 2851
46 Ga0105248_10217611 3300009177 Bacteria 2151
47 Ga0105249_10237329 3300009553 Bacteria 1801
48 Ga0105239_10117230 3300010375 Bacteria 2955
49 Ga0105246_10005768 3300011119 Bacteria 7552
50 Ga0157370_10028562 3300013104 Bacteria 5485
51 Ga0157374_10316206 3300013296 Bacteria 1547
52 Ga0157375_10052762 3300013308 Bacteria 3999
53 Ga0157377_10012372 3300014745 Bacteria 4291
54 Ga0157376_10072667 3300014969 Bacteria 2927
55 Ga0207710_10060490 3300025900 Bacteria 1717
56 Ga0207688_10001857 3300025901 Bacteria 11304
57 Ga0207699_10022731 3300025906 Bacteria 3403
58 Ga0207699_10050398 3300025906 Bacteria 2455
59 Ga0207643_10000303 3300025908 Bacteria 34008
60 Ga0207695_10274978 3300025913 Bacteria 1579
61 Ga0207693_10123689 3300025915 Bacteria 2032
62 Ga0207657_10037471 3300025919 Bacteria 4329
63 Ga0207649_10022744 3300025920 Bacteria 3622
64 Ga0207646_10013759 3300025922 Bacteria 7723
65 Ga0207650_10084839 3300025925 Bacteria 2408
66 Ga0207659_10064384 3300025926 Bacteria 2653
67 Ga0207644_10005696 3300025931 Bacteria 8108
68 Ga0207670_10150145 3300025936 Bacteria 1728
69 Ga0207691_10033769 3300025940 Bacteria 4763
70 Ga0207711_10094610 3300025941 Bacteria 2633
71 Ga0207689_10000715 3300025942 Bacteria 31759
72 Ga0207661_10080420 3300025944 Bacteria 2689
73 Ga0207661_10131436 3300025944 Bacteria 2144
74 Ga0207679_10002960 3300025945 Bacteria 10529
75 Ga0207667_10152586 3300025949 Bacteria 2377
76 Ga0207668_10083446 3300025972 Bacteria 2325
77 Ga0207677_10011463 3300026023 Bacteria 5059
78 Ga0207678_10002679 3300026067 Bacteria 16163
79 Ga0207702_10001526 3300026078 Bacteria 22913
80 Ga0207702_10003376 3300026078 Bacteria 14632
81 Ga0207676_10008983 3300026095 Bacteria 7109
82 Ga0207683_10013397 3300026121 Bacteria 6992
83 Ga0207698_10015364 3300026142 Bacteria 5124
84 Ga0209371_1008538 3300027312 Bacteria 3387
85 Ga0207428_10014226 3300027907 Bacteria 6923
86 Ga0207428_10102107 3300027907 Bacteria 2215
87 Ga0307517_10007853 3300028786 Bacteria 15452
88 Ga0307517_10012839 3300028786 Bacteria 11443
89 Ga0307517_10127354 3300028786 Bacteria 1851
90 Ga0268256_1013479 3300030500 Bacteria 2474
91 Ga0307511_10001397 3300030521 Bacteria 25465
92 Ga0307509_10044038 3300031507 Bacteria 4823
93 Ga0307508_10014063 3300031616 Bacteria 7303
94 Ga0307508_10157497 3300031616 Bacteria 1875
95 Ga0316576_10022002 3300031727 Bacteria 4420
96 Ga0307516_10030839 3300031730 Bacteria 5408
97 Ga0307518_10133149 3300031838 Bacteria 1744
98 Ga0307410_10110528 3300031852 Bacteria 1988
99 Ga0307407_10001813 3300031903 Bacteria 8008
100 Ga0307409_100167677 3300031995 Bacteria 1929
101 Ga0307416_100115001 3300032002 Bacteria 2381
102 Ga0307411_10128670 3300032005 Bacteria 1847
103 Ga0307415_100012464 3300032126 Bacteria 4918
104 Ga0307510_10079810 3300033180 Bacteria 3187
105 Ga0307510_10096768 3300033180 Bacteria 2765
106 Ga0316574_0018865 3300035398 Bacteria 4062
107 Ga0316582_0052767 3300036647 Bacteria 2585
108 Ga0451853_1429282 3300041512 Bacteria 6360
109 Ga0439463_010202 3300042016 Bacteria 2309
110 Ga0439459_0003232 3300042438 Bacteria 2569
111 Ga0466969_0000825 3300044656 Bacteria 16838
112 Ga0466972_0015699 3300044658 Bacteria 3786
113 Ga0466965_0005307 3300044683 Bacteria 5797
114 Ga0466966_0054426 3300044684 Bacteria 2536
115 Ga0466961_0000414 3300044693 Bacteria 27232
116 Ga0466961_0004405 3300044693 Bacteria 8813
117 Ga0466963_0002002 3300044694 Bacteria 11189
118 Ga0466971_0000201 3300044719 Bacteria 22995
119 Ga0466970_0008638 3300044765 Bacteria 5132
120 Ga0466959_0000238 3300045049 Bacteria 34129
121 Ga0466959_0007907 3300045049 Bacteria 7489
122 Ga0466959_0016795 3300045049 Bacteria 5355
123 Ga0466958_0008445 3300045836 Bacteria 5714
124 Ga0466967_0029216 3300045976 Bacteria 4611
125 Ga0466967_0040445 3300045976 Bacteria 4014
126 Ga0466967_0061439 3300045976 Bacteria 3333
127 Ga0495603_0063603 3300046455 Bacteria 2176
128 Ga0495603_0099833 3300046455 Bacteria 1695
129 Ga0495638_0051907 3300046460 Bacteria 2556
130 Ga0495651_0002874 3300046462 Bacteria 13339
131 Ga0495662_0013508 3300046476 Bacteria 3975
132 Ga0495594_0002205 3300046499 Bacteria 10129
133 Ga0495608_0050220 3300046511 Bacteria 2767
134 Ga0495618_0023428 3300046514 Bacteria 3817
135 Ga0495628_0011409 3300046516 Bacteria 7516
136 Ga0495637_0025841 3300046520 Bacteria 2643
137 Ga0495643_0002727 3300046522 Bacteria 13590
138 Ga0495666_0017125 3300046526 Bacteria 3609
139 Ga0495666_0091627 3300046526 Bacteria 1434
140 Ga0495652_0000725 3300046529 Bacteria 38309
141 Ga0495652_0154918 3300046529 Bacteria 1785
142 Ga0495645_0044885 3300046543 Bacteria 3223
143 Ga0495622_0002407 3300046557 Bacteria 9093
144 Ga0495667_0069743 3300046559 Bacteria 2294
145 Ga0495634_0053439 3300046642 Bacteria 2706
146 Ga0495625_0060359 3300046660 Bacteria 2687
147 Ga0495635_0017221 3300046663 Bacteria 5047
148 Ga0495635_0085408 3300046663 Bacteria 2159
149 Ga0495657_0003599 3300046675 Bacteria 12604
150 Ga0495646_0014200 3300046680 Bacteria 5064
151 Ga0495670_0014001 3300046691 Bacteria 3946
152 Ga0495671_0051058 3300046692 Bacteria 2058
153 Ga0495589_0017314 3300046794 Bacteria 3699
154 Ga0495660_0004397 3300046810 Bacteria 8536
155 Ga0495604_0045558 3300047317 Bacteria 3422
156 Ga0495676_0019534 3300047321 Bacteria 5958
157 Ga0495676_0066267 3300047321 Bacteria 2800
158 Ga0495680_0015685 3300047322 Bacteria 6525
159 Ga0495683_0032408 3300047323 Bacteria 2662
160 Ga0495687_002243 3300047443 Bacteria 15939
161 Ga0495687_005088 3300047443 Bacteria 8535
162 Ga0495687_024031 3300047443 Bacteria 2903
163 Ga0495687_053023 3300047443 Bacteria 1711
164 Ga0495685_000522 3300047447 Bacteria 11905
165 Ga0495685_005725 3300047447 Bacteria 4058
166 Ga0495685_007070 3300047447 Bacteria 3697
167 Ga0495681_0003538 3300047470 Bacteria 10866
168 Ga0495684_0098042 3300047471 Bacteria 2217
169 Ga0495593_0016575 3300047673 Bacteria 4154
170 Ga0495614_0010576 3300048089 Bacteria 4068
171 Ga0496102_0000949 3300048905 Bacteria 27333
172 Ga0496104_0245899 3300048907 Bacteria 1701
173 Ga0496107_0105404 3300048910 Bacteria 2070
174 Ga0496107_0188441 3300048910 Bacteria 1532
175 Ga0496108_0280713 3300048911 Bacteria 1450
176 Ga0496109_0143263 3300048912 Bacteria 2235
177 Ga0496110_0020912 3300048913 Bacteria 5528
178 Ga0496110_0020976 3300048913 Bacteria 5521
179 Ga0496112_0203813 3300048915 Bacteria 1936
180 Ga0496115_0018220 3300048918 Bacteria 5387
181 Ga0496116_0000109 3300048919 Bacteria 185809
182 Ga0496117_0025471 3300048920 Bacteria 4650
183 Ga0496118_0004188 3300048921 Bacteria 17350
184 Ga0496119_0010329 3300048922 Bacteria 7865
185 Ga0496126_0000006 3300048929 Bacteria 798804
186 Ga0496126_0011880 3300048929 Bacteria 8955
187 Ga0501031_0014275 3300049568 Bacteria 5166
188 Ga0501032_0142346 3300049569 Bacteria 1579
189 Ga0501033_0010480 3300049570 Bacteria 7110
190 Ga0501036_0011709 3300049572 Bacteria 7269
191 Ga0501036_0031830 3300049572 Bacteria 4456
192 Ga0501038_0066648 3300049574 Bacteria 3065
193 Ga0501039_0006029 3300049575 Bacteria 9196
194 Ga0501040_0007098 3300049576 Bacteria 7258
195 Ga0501041_0059782 3300049577 Bacteria 2332
196 Ga0501046_0103334 3300049580 Bacteria 2184
197 Ga0501047_0001403 3300049581 Bacteria 23611
198 Ga0501048_0008694 3300049582 Bacteria 7654
199 Ga0501071_0012232 3300049587 Bacteria 5813
200 Ga0501071_0018272 3300049587 Bacteria 4852
201 Ga0501072_0013753 3300049588 Bacteria 6196
202 Ga0501074_0090538 3300049590 Bacteria 2191
203 Ga0501075_0002707 3300049591 Bacteria 11851
204 Ga0501035_0008382 3300049822 Bacteria 9624
205 Ga0501035_0047136 3300049822 Bacteria 3871
206 Ga0501035_0100848 3300049822 Bacteria 2534
207 Ga0501044_0002109 3300049823 Bacteria 22868
208 Ga0501044_0011406 3300049823 Bacteria 9626
209 Ga0501044_0013656 3300049823 Bacteria 8777
210 Ga0501044_0065372 3300049823 Bacteria 3709
211 Ga0501045_0003165 3300049824 Bacteria 11246
212 nmdc:mga08y16_102497_c1 3300050511 Bacteria 2980
213 nmdc:mga08y16_252421_c1 3300050511 Bacteria 1823
214 nmdc:mga0rr50_102744_c1 3300050513 Bacteria 2249
215 nmdc:mga0a205_10539_c1 3300050515 Bacteria 8493
216 nmdc:mga0a205_8245_c1 3300050515 Bacteria 9470
217 Ga0495601_0023466 3300053077 Bacteria 3790
218 Ga0500643_000814 3300053087 Bacteria 20121
219 Ga0500646_0007403 3300053090 Bacteria 2805
220 Ga0500556_0011838 3300053104 Bacteria 2592
221 Ga0500569_000438 3300053109 Bacteria 6784
222 Ga0500628_001159 3300053129 Bacteria 4582
223 Ga0500652_000729 3300053131 Bacteria 11161
224 Ga0500579_017977 3300053143 Bacteria 4578
225 Ga0500600_0004345 3300053149 Bacteria 8319
226 Ga0500634_0001669 3300053161 Bacteria 8816
227 Ga0500656_000391 3300053732 Bacteria 3182
228 Ga0500587_000203 3300053739 Bacteria 6221
229 Ga0501084_0064680 3300054114 Bacteria 3060
230 Ga0501082_0011338 3300060353 Bacteria 7662
231 Ga0466962_0000049 3300061719 Bacteria 48219
232 Ga0466962_0002477 3300061719 Bacteria 8751
233 Ga0466962_0009760 3300061719 Bacteria 4604
234 2508671462 2508501039 Bacteria 9978592
235 2517761438 2517572101 Bacteria 6884336
236 2644438767 2643221678 Bacteria 9540101
237 2676202997 2675902999 Bacteria 9438463
238 2774847573 2773857921 Bacteria 9435764
239 2784590881 2784132148 Bacteria 8627943
240 2808848450 2808606359 Bacteria 9866990
241 2812372234 2811994882 Bacteria 4688362
242 2819427441 2818991318 Bacteria 5266538
243 2819691052 2818991462 Bacteria 4320267
244 2819727608 2818991469 Bacteria 4644110
245 2839986674 2839986021 Bacteria 3685650
246 2839988771 2839986021 Bacteria 3685650
247 2868088720 2868088558 Bacteria 7609351
248 2875394903 2875391855 Bacteria 7600475
249 2947225376 2947224130 Bacteria 9938529
250 8002779680 8002775197 Bacteria 10728764
251 8004029398 8004025490 Bacteria 4327753
252 8025483870 8025478263 Bacteria 8209203
253 Ga0081455_10023179
254 Ga0006778J45830_1017092
255 Ga0007427J51700_121904
256 Ga0007429J51699_1020322
257 Ga0070690_100121850
258 Ga0068869_100003443
259 Ga0070680_100111987
260 Ga0070682_100003107
261 Ga0070689_100114604
262 Ga0070691_10030234
263 Ga0070661_100011097
264 Ga0070671_100006661
265 Ga0070673_100040061
266 Ga0070667_100003678
267 Ga0070713_100033249
268 Ga0070663_100002235
269 Ga0070678_100014341
270 Ga0070706_100008105
271 Ga0070706_100032959
272 Ga0070707_100003824
273 Ga0070707_100074021
274 Ga0070698_100178963
275 Ga0070672_100049435
276 Ga0070665_100319206
277 Ga0068855_100114460
278 Ga0068856_100016690
279 Ga0070702_100002984
280 Ga0068852_100004880
281 Ga0068864_100169394
282 Ga0081455_10004069
283 Ga0081540_1037397
284 Ga0070717_10008838
285 Ga0075432_10036486
286 Ga0097621_100093840
287 Ga0075428_100007927
288 Ga0075428_100115223
289 Ga0075433_10002124
290 Ga0075433_10070284
291 Ga0075434_100092101
292 Ga0075434_100117351
293 Ga0111539_10084969
294 Ga0105245_10169484
295 Ga0105247_10004342
296 Ga0114129_10004061
297 Ga0105243_10068956
298 Ga0105248_10217611
299 Ga0105249_10237329
300 Ga0105239_10117230
301 Ga0105246_10005768
302 Ga0157370_10028562
303 Ga0157374_10316206
304 Ga0157375_10052762
305 Ga0157377_10012372
306 Ga0157376_10072667
307 Ga0207710_10060490
308 Ga0207688_10001857
309 Ga0207699_10022731
310 Ga0207699_10050398
311 Ga0207643_10000303
312 Ga0207695_10274978
313 Ga0207693_10123689
314 Ga0207657_10037471
315 Ga0207649_10022744
316 Ga0207646_10013759
317 Ga0207650_10084839
318 Ga0207659_10064384
319 Ga0207644_10005696
320 Ga0207670_10150145
321 Ga0207691_10033769
322 Ga0207711_10094610
323 Ga0207689_10000715
324 Ga0207661_10080420
325 Ga0207661_10131436
326 Ga0207679_10002960
327 Ga0207667_10152586
328 Ga0207668_10083446
329 Ga0207677_10011463
330 Ga0207678_10002679
331 Ga0207702_10001526
332 Ga0207702_10003376
333 Ga0207676_10008983
334 Ga0207683_10013397
335 Ga0207698_10015364
336 Ga0209371_1008538
337 Ga0207428_10014226
338 Ga0207428_10102107
339 Ga0307517_10007853
340 Ga0307517_10012839
341 Ga0307517_10127354
342 Ga0268256_1013479
343 Ga0307511_10001397
344 Ga0307509_10044038
345 Ga0307508_10014063
346 Ga0307508_10157497
347 Ga0316576_10022002
348 Ga0307516_10030839
349 Ga0307518_10133149
350 Ga0307410_10110528
351 Ga0307407_10001813
352 Ga0307409_100167677
353 Ga0307416_100115001
354 Ga0307411_10128670
355 Ga0307415_100012464
356 Ga0307510_10079810
357 Ga0307510_10096768
358 Ga0316574_0018865
359 Ga0316582_0052767
360 Ga0451853_1429282
361 Ga0439463_010202
362 Ga0439459_0003232
363 Ga0466969_0000825
364 Ga0466972_0015699
365 Ga0466965_0005307
366 Ga0466966_0054426
367 Ga0466961_0000414
368 Ga0466961_0004405
369 Ga0466963_0002002
370 Ga0466971_0000201
371 Ga0466970_0008638
372 Ga0466959_0000238
373 Ga0466959_0007907
374 Ga0466959_0016795
375 Ga0466958_0008445
376 Ga0466967_0029216
377 Ga0466967_0040445
378 Ga0466967_0061439
379 Ga0495603_0063603
380 Ga0495603_0099833
381 Ga0495638_0051907
382 Ga0495651_0002874
383 Ga0495662_0013508
384 Ga0495594_0002205
385 Ga0495608_0050220
386 Ga0495618_0023428
387 Ga0495628_0011409
388 Ga0495637_0025841
389 Ga0495643_0002727
390 Ga0495666_0017125
391 Ga0495666_0091627
392 Ga0495652_0000725
393 Ga0495652_0154918
394 Ga0495645_0044885
395 Ga0495622_0002407
396 Ga0495667_0069743
397 Ga0495634_0053439
398 Ga0495625_0060359
399 Ga0495635_0017221
400 Ga0495635_0085408
401 Ga0495657_0003599
402 Ga0495646_0014200
403 Ga0495670_0014001
404 Ga0495671_0051058
405 Ga0495589_0017314
406 Ga0495660_0004397
407 Ga0495604_0045558
408 Ga0495676_0019534
409 Ga0495676_0066267
410 Ga0495680_0015685
411 Ga0495683_0032408
412 Ga0495687_002243
413 Ga0495687_005088
414 Ga0495687_024031
415 Ga0495687_053023
416 Ga0495685_000522
417 Ga0495685_005725
418 Ga0495685_007070
419 Ga0495681_0003538
420 Ga0495684_0098042
421 Ga0495593_0016575
422 Ga0495614_0010576
423 Ga0496102_0000949
424 Ga0496104_0245899
425 Ga0496107_0105404
426 Ga0496107_0188441
427 Ga0496108_0280713
428 Ga0496109_0143263
429 Ga0496110_0020912
430 Ga0496110_0020976
431 Ga0496112_0203813
432 Ga0496115_0018220
433 Ga0496116_0000109
434 Ga0496117_0025471
435 Ga0496118_0004188
436 Ga0496119_0010329
437 Ga0496126_0000006
438 Ga0496126_0011880
439 Ga0501031_0014275
440 Ga0501032_0142346
441 Ga0501033_0010480
442 Ga0501036_0011709
443 Ga0501036_0031830
444 Ga0501038_0066648
445 Ga0501039_0006029
446 Ga0501040_0007098
447 Ga0501041_0059782
448 Ga0501046_0103334
449 Ga0501047_0001403
450 Ga0501048_0008694
451 Ga0501071_0012232
452 Ga0501071_0018272
453 Ga0501072_0013753
454 Ga0501074_0090538
455 Ga0501075_0002707
456 Ga0501035_0008382
457 Ga0501035_0047136
458 Ga0501035_0100848
459 Ga0501044_0002109
460 Ga0501044_0011406
461 Ga0501044_0013656
462 Ga0501044_0065372
463 Ga0501045_0003165
464 nmdc:mga08y16_102497_c1
465 nmdc:mga08y16_252421_c1
466 nmdc:mga0rr50_102744_c1
467 nmdc:mga0a205_10539_c1
468 nmdc:mga0a205_8245_c1
469 Ga0495601_0023466
470 Ga0500643_000814
471 Ga0500646_0007403
472 Ga0500556_0011838
473 Ga0500569_000438
474 Ga0500628_001159
475 Ga0500652_000729
476 Ga0500579_017977
477 Ga0500600_0004345
478 Ga0500634_0001669
479 Ga0500656_000391
480 Ga0500587_000203
481 Ga0501084_0064680
482 Ga0501082_0011338
483 Ga0466962_0000049
484 Ga0466962_0002477
485 Ga0466962_0009760
486 2508671462
487 2517761438
488 2644438767
489 2676202997
490 2774847573
491 2784590881
492 2808848450
493 2812372234
494 2819427441
495 2819691052
496 2819727608
497 2839986674
498 2839988771
499 2868088720
500 2875394903
501 2947225376
502 8002779680
503 8004029398
504 8025483870

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00984

UDPG_MGDP_dh

UDP-glucose/GDP-mannose dehydrogenase family, central domain

290

385

0.97

PF03720

UDPG_MGDP_dh_C

UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

408

509

0.97

PF03721

UDPG_MGDP_dh_N

UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

89

273

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4a7p-assembly2.cif.gz_B-2 se-met derivatized ugdg, udp-glucose dehydrogenase from sphingomonas elodea 0.9702 1 439
4a7p-assembly1.cif.gz_A-2 se-met derivatized ugdg, udp-glucose dehydrogenase from sphingomonas elodea 0.97 2 439
4a7p-assembly2.cif.gz_B-2 se-met derivatized ugdg, udp-glucose dehydrogenase from sphingomonas elodea 0.968 1 439
4a7p-assembly1.cif.gz_A-2 se-met derivatized ugdg, udp-glucose dehydrogenase from sphingomonas elodea 0.9611 2 439
3gg2-assembly1.cif.gz_B crystal structure of udp-glucose 6-dehydrogenase from porphyromonas gingivalis bound to product udp-glucuronate 0.9538 1 422
ID Description Score Start End Superfamily
af_O07248_235_441_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9944 235 439 3.40.50.720
af_O07248_235_441_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9801 235 439 3.40.50.720
af_O07248_1_202_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9614 1 202 3.40.50.720
af_O07248_1_202_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9568 1 202 3.40.50.720
3gg2B03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9523 235 422 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A0K8QA83-F1-model_v4 UDP-glucose 6-dehydrogenase TuaD 0.9995 307 437 GO:0016616
GO:0051287
AF-A0A7K0WDG7-F1-model_v4 UDP-glucose 6-dehydrogenase 0.9962 356 439 GO:0016616
GO:0051287
AF-A0A098BH64-F1-model_v4 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) 0.995 308 439 GO:0003979
GO:0051287
AF-A0A6G3XXZ1-F1-model_v4 UDP-glucose 6-dehydrogenase 0.9947 318 422 GO:0016616
GO:0051287
AF-A0A7X7SG19-F1-model_v4 UDP-glucose/GDP-mannose dehydrogenase family protein 0.9929 191 439 GO:0000271
GO:0003979
GO:0051287

Map