F363082
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 252 | 167 | 504 | 398 |
Family's Representative Sequence
| Representative Sequence | 3300005539|Ga0068853_100084008|Ga0068853_1000840082 |
| Length | 421 |
| Sequence | MAGDGRTFDRGCVTLTGGLERGIEGSLVRTQGVTAPSGFRATGISAGIKASGNPDLALVFNEGPDYGAAAVFTRNKVKAAPVLWTQQVMTTKRLRAVILNSGGANACTGPLGFQDTHATAEAVARALSDWGTETGAIEVAVCSTGLIGDRLPMDKVLGGVKDIVHEMAGGLTGGTEAAQAIMTTDTVPKQVALHHQGSWTVGAMAKGAGMLAPSLATMLCVITTDAVADADALDSALRRAAAHTFDRLDIDGSCSTNDTVLLLASGASEIAPSQAELDAAVLAVCDDLCAQLQADAEGVTKRVAVTVKGAASDDDAVVAARVIARDSLVKTALFGSDPNWGRVLAAVGMAPVEMNPDRISVAFNGFPVCIDGVGAPGARDADLSGADVSVVVDLGVGSGEATIRTTDLSHAYVEENSAYSS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 2 | 3300002459 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 | Metagenome | Rhizosphere |
| 3 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 4 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 12 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 13 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 14 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 15 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 16 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 17 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 18 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 19 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 20 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 21 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 22 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 33 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 34 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 35 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 56 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 57 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 58 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 59 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 60 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 61 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 62 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 63 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 64 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 65 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 66 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 67 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 68 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 69 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 70 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 71 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 72 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 73 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 74 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 75 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 76 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 77 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 78 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 79 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 88 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 89 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 90 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 91 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 92 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 93 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 94 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 95 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 96 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 97 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 98 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 99 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 100 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 101 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 102 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 103 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 104 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 105 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 106 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 107 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 108 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 109 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 110 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 111 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 114 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 115 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 122 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 123 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 124 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 125 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 127 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 128 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 129 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 130 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 131 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 132 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 133 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 134 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 135 | 2547132424 | Nocardia nova SH22a | Isolate | Unclassified |
| 136 | 2551306166 | Nocardia tenerifensis NBRC 101015 | Isolate | Rhizosphere |
| 137 | 2565956761 | Rhodococcus qingshengii BKS 20-40 | Isolate | Rhizosphere |
| 138 | 2643221687 | Mycobacterium sp. Root135 | Isolate | Unclassified |
| 139 | 2643221692 | Nocardia sp. Root136 | Isolate | Unclassified |
| 140 | 2643221715 | Mycobacterium sp. Root265 | Isolate | Unclassified |
| 141 | 2738541264 | Mycobacterium sp. OK889 | Isolate | Unclassified |
| 142 | 2738541274 | Mycobacterium sp. YR708 | Isolate | Unclassified |
| 143 | 2738541356 | Mycobacterium sp. OK887 | Isolate | Unclassified |
| 144 | 2738543005 | Rhodococcus sp. OK519 | Isolate | Unclassified |
| 145 | 2738543011 | Rhodococcus sp. OK611 | Isolate | Unclassified |
| 146 | 2738543028 | Mycobacterium sp. YR782 | Isolate | Unclassified |
| 147 | 2738543034 | Rhodococcus sp. OK269 | Isolate | Unclassified |
| 148 | 2751185792 | Kitasatospora arboriphila NRRL B-24581 | Isolate | Unclassified |
| 149 | 2842888712 | Tsukamurella sp. R-71941 | Isolate | Unclassified |
| 150 | 2889300758 | Rhodococcus sp. PvR099 | Isolate | Rhizosphere |
| 151 | 2902792274 | Mycolicibacterium sp. P9-64 | Isolate | Unclassified |
| 152 | 2902799365 | Mycolicibacterium sp. P1-5 | Isolate | Unclassified |
| 153 | 2902837492 | Mycolicibacterium sp. P1-18 | Isolate | Unclassified |
| 154 | 2904535858 | Rhodococcus erythropolis 2017 | Isolate | Unclassified |
| 155 | 2904765812 | Rhodococcus fascians 1590 | Isolate | Rhizosphere |
| 156 | 2904770941 | Rhodococcus fascians 1339 | Isolate | Rhizosphere |
| 157 | 2908811453 | Rhodococcus sp. 1R11 | Isolate | Unclassified |
| 158 | 2918501144 | Streptomyces sp. PvR006 | Isolate | Rhizosphere |
| 159 | 2919420072 | Rhodococcus fascians 3241 | Isolate | Rhizosphere |
| 160 | 2919432681 | Rhodococcus sp. 3258 | Isolate | Rhizosphere |
| 161 | 2919713450 | Nocardia kruczakiae 4272 | Isolate | Rhizosphere |
| 162 | 2922554459 | Rhodococcus sp. 66b | Isolate | Unclassified |
| 163 | 2928142448 | Prescottella equi DPS 2018 | Isolate | Unclassified |
| 164 | 2939582691 | Mycolicibacterium sp. 624 | Isolate | Rhizosphere |
| 165 | 2939743619 | Rhodococcus sp. PvR044 | Isolate | Rhizosphere |
| 166 | 2974315732 | Rhodococcus sp. SORGH_AS 301 | Isolate | Unclassified |
| 167 | 2984523437 | Rhodococcus sp. SORGH_AS303 | Isolate | Aerial Root |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 86.9 |
| Metatranscriptomes | 0 |
| Isolates | 13.1 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.4 |
| Bulb | 0 |
| Endosphere | 15.08 |
| Nodule | 0 |
| Rhizoplane | 11.51 |
| Rhizosphere | 51.19 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0068853_100084008 | 3300005539 | Bacteria | 2790 |
| 2 | JGI24751J29686_10003535 | 3300002459 | Bacteria | 3149 |
| 3 | Ga0055540_1000211 | 3300003792 | Bacteria | 55318 |
| 4 | Ga0055540_1002263 | 3300003792 | Bacteria | 10381 |
| 5 | Ga0055540_1004357 | 3300003792 | Bacteria | 6421 |
| 6 | Ga0070668_100023898 | 3300005347 | Bacteria | 4628 |
| 7 | Ga0070669_100016456 | 3300005353 | Bacteria | 5276 |
| 8 | Ga0070671_100000370 | 3300005355 | Bacteria | 31140 |
| 9 | Ga0070667_100000562 | 3300005367 | Bacteria | 36767 |
| 10 | Ga0070667_100001312 | 3300005367 | Bacteria | 22360 |
| 11 | Ga0070678_100040251 | 3300005456 | Bacteria | 3306 |
| 12 | Ga0070665_100027875 | 3300005548 | Bacteria | 5687 |
| 13 | Ga0070665_100126619 | 3300005548 | Bacteria | 2557 |
| 14 | Ga0070664_100164481 | 3300005564 | Bacteria | 1965 |
| 15 | Ga0068859_100000984 | 3300005617 | Bacteria | 29203 |
| 16 | Ga0068863_100002213 | 3300005841 | Bacteria | 19310 |
| 17 | Ga0068863_100016151 | 3300005841 | Bacteria | 7162 |
| 18 | Ga0068858_100261670 | 3300005842 | Bacteria | 1644 |
| 19 | Ga0068860_100000112 | 3300005843 | Bacteria | 130953 |
| 20 | Ga0068862_100001577 | 3300005844 | Bacteria | 20769 |
| 21 | Ga0081538_10044028 | 3300005981 | Bacteria | 2791 |
| 22 | Ga0075363_100002130 | 3300006048 | Bacteria | 7956 |
| 23 | Ga0075363_100003796 | 3300006048 | Bacteria | 6514 |
| 24 | Ga0075363_100006843 | 3300006048 | Bacteria | 5213 |
| 25 | Ga0075364_10010512 | 3300006051 | Bacteria | 5592 |
| 26 | Ga0075364_10014036 | 3300006051 | Bacteria | 4940 |
| 27 | Ga0075364_10041589 | 3300006051 | Bacteria | 2984 |
| 28 | Ga0075364_10052708 | 3300006051 | Bacteria | 2659 |
| 29 | Ga0075362_10012663 | 3300006177 | Bacteria | 3357 |
| 30 | Ga0075370_10002357 | 3300006353 | Bacteria | 8736 |
| 31 | Ga0075370_10012907 | 3300006353 | Bacteria | 4427 |
| 32 | Ga0075370_10020119 | 3300006353 | Bacteria | 3643 |
| 33 | Ga0075431_100032457 | 3300006847 | Bacteria | 5380 |
| 34 | Ga0097620_100000984 | 3300006931 | Bacteria | 29203 |
| 35 | Ga0105245_10125950 | 3300009098 | Bacteria | 2398 |
| 36 | Ga0105247_10000007 | 3300009101 | Bacteria | 409490 |
| 37 | Ga0105243_10002698 | 3300009148 | Bacteria | 14743 |
| 38 | Ga0105248_10002480 | 3300009177 | Bacteria | 20511 |
| 39 | Ga0105237_10002337 | 3300009545 | Bacteria | 23560 |
| 40 | Ga0105237_10046779 | 3300009545 | Bacteria | 4351 |
| 41 | Ga0105249_10000001 | 3300009553 | Bacteria | 504948 |
| 42 | Ga0105239_10046641 | 3300010375 | Bacteria | 4748 |
| 43 | Ga0163163_10039156 | 3300014325 | Bacteria | 4624 |
| 44 | Ga0157376_10092929 | 3300014969 | Bacteria | 2617 |
| 45 | Ga0213876_10003457 | 3300021384 | Bacteria | 9031 |
| 46 | Ga0213876_10023788 | 3300021384 | Bacteria | 3234 |
| 47 | Ga0213876_10037503 | 3300021384 | Bacteria | 2557 |
| 48 | Ga0213875_10037287 | 3300021388 | Bacteria | 2291 |
| 49 | Ga0209051_1000011 | 3300025303 | Bacteria | 610828 |
| 50 | Ga0209051_1000795 | 3300025303 | Bacteria | 33193 |
| 51 | Ga0209051_1002207 | 3300025303 | Bacteria | 14376 |
| 52 | Ga0209051_1018647 | 3300025303 | Bacteria | 3062 |
| 53 | Ga0207710_10000013 | 3300025900 | Bacteria | 409402 |
| 54 | Ga0207647_10032567 | 3300025904 | Bacteria | 3347 |
| 55 | Ga0207643_10140715 | 3300025908 | Bacteria | 1441 |
| 56 | Ga0207671_10045100 | 3300025914 | Bacteria | 3260 |
| 57 | Ga0207681_10011452 | 3300025923 | Bacteria | 5449 |
| 58 | Ga0207700_10221377 | 3300025928 | Bacteria | 1604 |
| 59 | Ga0207664_10037744 | 3300025929 | Bacteria | 3742 |
| 60 | Ga0207664_10089635 | 3300025929 | Bacteria | 2519 |
| 61 | Ga0207664_10135685 | 3300025929 | Bacteria | 2076 |
| 62 | Ga0207644_10009434 | 3300025931 | Bacteria | 6407 |
| 63 | Ga0207709_10001743 | 3300025935 | Bacteria | 14632 |
| 64 | Ga0207711_10001465 | 3300025941 | Bacteria | 22000 |
| 65 | Ga0207712_10000006 | 3300025961 | Bacteria | 573204 |
| 66 | Ga0207668_10001742 | 3300025972 | Bacteria | 12748 |
| 67 | Ga0207658_10000970 | 3300025986 | Bacteria | 23684 |
| 68 | Ga0207658_10003490 | 3300025986 | Bacteria | 11099 |
| 69 | Ga0207658_10169019 | 3300025986 | Bacteria | 1799 |
| 70 | Ga0207703_10096664 | 3300026035 | Bacteria | 2494 |
| 71 | Ga0207678_10008631 | 3300026067 | Bacteria | 8982 |
| 72 | Ga0207641_10036347 | 3300026088 | Bacteria | 4111 |
| 73 | Ga0207683_10123342 | 3300026121 | Bacteria | 2327 |
| 74 | Ga0268266_10007851 | 3300028379 | Bacteria | 9561 |
| 75 | Ga0268266_10026901 | 3300028379 | Bacteria | 4894 |
| 76 | Ga0268265_10000016 | 3300028380 | Bacteria | 299380 |
| 77 | Ga0268264_10000026 | 3300028381 | Bacteria | 459088 |
| 78 | Ga0265327_10000041 | 3300031251 | Bacteria | 288506 |
| 79 | Ga0265327_10000138 | 3300031251 | Bacteria | 160313 |
| 80 | Ga0265327_10001529 | 3300031251 | Bacteria | 28541 |
| 81 | Ga0265327_10047280 | 3300031251 | Bacteria | 2271 |
| 82 | Ga0307513_10009318 | 3300031456 | Bacteria | 12429 |
| 83 | Ga0307508_10069136 | 3300031616 | Bacteria | 3102 |
| 84 | Ga0307405_10018950 | 3300031731 | Bacteria | 3811 |
| 85 | Ga0307410_10055719 | 3300031852 | Bacteria | 2685 |
| 86 | Ga0307410_10124363 | 3300031852 | Bacteria | 1886 |
| 87 | Ga0307416_100062987 | 3300032002 | Bacteria | 3035 |
| 88 | Ga0307415_100177554 | 3300032126 | Bacteria | 1667 |
| 89 | Ga0307507_10086599 | 3300033179 | Bacteria | 2715 |
| 90 | Ga0436364_0435413 | 3300037853 | Bacteria | 4275 |
| 91 | Ga0436364_1141707 | 3300037853 | Bacteria | 4683 |
| 92 | Ga0436364_1264961 | 3300037853 | Bacteria | 3608 |
| 93 | Ga0436365_0093819 | 3300039437 | Bacteria | 4441 |
| 94 | Ga0436365_0885952 | 3300039437 | Bacteria | 25510 |
| 95 | Ga0436365_1103670 | 3300039437 | Bacteria | 5126 |
| 96 | Ga0436365_1214067 | 3300039437 | Bacteria | 31173 |
| 97 | Ga0436363_1541032 | 3300039450 | Bacteria | 2785 |
| 98 | Ga0439466_0014217 | 3300041411 | Bacteria | 2901 |
| 99 | Ga0439466_0031325 | 3300041411 | Bacteria | 1820 |
| 100 | Ga0439465_0003314 | 3300041413 | Bacteria | 5261 |
| 101 | Ga0439465_0018417 | 3300041413 | Bacteria | 2181 |
| 102 | Ga0439431_0000706 | 3300041997 | Bacteria | 7181 |
| 103 | Ga0466969_0020846 | 3300044656 | Bacteria | 3391 |
| 104 | Ga0466965_0005508 | 3300044683 | Bacteria | 5708 |
| 105 | Ga0466965_0047156 | 3300044683 | Bacteria | 2133 |
| 106 | Ga0466963_0025361 | 3300044694 | Bacteria | 3781 |
| 107 | Ga0466963_0065792 | 3300044694 | Bacteria | 2431 |
| 108 | Ga0466971_0037403 | 3300044719 | Bacteria | 2175 |
| 109 | Ga0466970_0038384 | 3300044765 | Bacteria | 2540 |
| 110 | Ga0466957_0002721 | 3300044842 | Bacteria | 9561 |
| 111 | Ga0466957_0017488 | 3300044842 | Bacteria | 4200 |
| 112 | Ga0466957_0116934 | 3300044842 | Bacteria | 1697 |
| 113 | Ga0466957_0264864 | 3300044842 | Bacteria | 1146 |
| 114 | Ga0466960_0002617 | 3300044901 | Bacteria | 6774 |
| 115 | Ga0466959_0037338 | 3300045049 | Bacteria | 3589 |
| 116 | Ga0466958_0000748 | 3300045836 | Bacteria | 14254 |
| 117 | Ga0466958_0048008 | 3300045836 | Bacteria | 2578 |
| 118 | Ga0466967_0019422 | 3300045976 | Bacteria | 5463 |
| 119 | Ga0466967_0022467 | 3300045976 | Bacteria | 5147 |
| 120 | Ga0466967_0101875 | 3300045976 | Bacteria | 2625 |
| 121 | Ga0466967_0174339 | 3300045976 | Bacteria | 2025 |
| 122 | Ga0495638_0001596 | 3300046460 | Bacteria | 20236 |
| 123 | Ga0495648_0000977 | 3300046524 | Bacteria | 29486 |
| 124 | Ga0495665_0038624 | 3300046531 | Bacteria | 2545 |
| 125 | Ga0495668_0002662 | 3300046616 | Bacteria | 14339 |
| 126 | Ga0495668_0030624 | 3300046616 | Bacteria | 3037 |
| 127 | Ga0495625_0121049 | 3300046660 | Bacteria | 1781 |
| 128 | Ga0495672_0001236 | 3300047320 | Bacteria | 25663 |
| 129 | Ga0495672_0045682 | 3300047320 | Bacteria | 2619 |
| 130 | Ga0495673_0002507 | 3300047469 | Bacteria | 12853 |
| 131 | Ga0495686_0003794 | 3300047472 | Bacteria | 12835 |
| 132 | Ga0496100_0000335 | 3300048903 | Bacteria | 22955 |
| 133 | Ga0496100_0003473 | 3300048903 | Bacteria | 8222 |
| 134 | Ga0496100_0003744 | 3300048903 | Bacteria | 7962 |
| 135 | Ga0496101_0000193 | 3300048904 | Bacteria | 47493 |
| 136 | Ga0496101_0027998 | 3300048904 | Bacteria | 3932 |
| 137 | Ga0496101_0028901 | 3300048904 | Bacteria | 3875 |
| 138 | Ga0496101_0083690 | 3300048904 | Bacteria | 2362 |
| 139 | Ga0496102_0000403 | 3300048905 | Bacteria | 50292 |
| 140 | Ga0496102_0000750 | 3300048905 | Bacteria | 31716 |
| 141 | Ga0496102_0046553 | 3300048905 | Bacteria | 3939 |
| 142 | Ga0496102_0226400 | 3300048905 | Bacteria | 1763 |
| 143 | Ga0496103_0000284 | 3300048906 | Bacteria | 47531 |
| 144 | Ga0496103_0001055 | 3300048906 | Bacteria | 19218 |
| 145 | Ga0496103_0003680 | 3300048906 | Bacteria | 9321 |
| 146 | Ga0496103_0173404 | 3300048906 | Bacteria | 1385 |
| 147 | Ga0496104_0010339 | 3300048907 | Bacteria | 8333 |
| 148 | Ga0496104_0056317 | 3300048907 | Bacteria | 3717 |
| 149 | Ga0496105_0006336 | 3300048908 | Bacteria | 9088 |
| 150 | Ga0496106_0011075 | 3300048909 | Bacteria | 6668 |
| 151 | Ga0496106_0014163 | 3300048909 | Bacteria | 5892 |
| 152 | Ga0496108_0046352 | 3300048911 | Bacteria | 3632 |
| 153 | Ga0496109_0010792 | 3300048912 | Bacteria | 7822 |
| 154 | Ga0496109_0081986 | 3300048912 | Bacteria | 2972 |
| 155 | Ga0496110_0023289 | 3300048913 | Bacteria | 5266 |
| 156 | Ga0496112_0022493 | 3300048915 | Bacteria | 6008 |
| 157 | Ga0496113_0006724 | 3300048916 | Bacteria | 7325 |
| 158 | Ga0496114_0051708 | 3300048917 | Bacteria | 3421 |
| 159 | Ga0496115_0000813 | 3300048918 | Bacteria | 22917 |
| 160 | Ga0496115_0111866 | 3300048918 | Bacteria | 2244 |
| 161 | Ga0496116_0000059 | 3300048919 | Bacteria | 274491 |
| 162 | Ga0496116_0049096 | 3300048919 | Bacteria | 2825 |
| 163 | Ga0496117_0000055 | 3300048920 | Bacteria | 274518 |
| 164 | Ga0496117_0003028 | 3300048920 | Bacteria | 20155 |
| 165 | Ga0496117_0017364 | 3300048920 | Bacteria | 6009 |
| 166 | Ga0496118_0000879 | 3300048921 | Bacteria | 47364 |
| 167 | Ga0496118_0002102 | 3300048921 | Bacteria | 27974 |
| 168 | Ga0496118_0009080 | 3300048921 | Bacteria | 10128 |
| 169 | Ga0496119_0044985 | 3300048922 | Bacteria | 2773 |
| 170 | Ga0496120_0018547 | 3300048923 | Bacteria | 4479 |
| 171 | Ga0496120_0033499 | 3300048923 | Bacteria | 3086 |
| 172 | Ga0496120_0050033 | 3300048923 | Bacteria | 2395 |
| 173 | Ga0496121_0001114 | 3300048924 | Bacteria | 47347 |
| 174 | Ga0496121_0007638 | 3300048924 | Bacteria | 12989 |
| 175 | Ga0496125_0107543 | 3300048928 | Bacteria | 2032 |
| 176 | Ga0496126_0009388 | 3300048929 | Bacteria | 10394 |
| 177 | Ga0496126_0010164 | 3300048929 | Bacteria | 9907 |
| 178 | Ga0496126_0022552 | 3300048929 | Bacteria | 6122 |
| 179 | Ga0496126_0093059 | 3300048929 | Bacteria | 2647 |
| 180 | Ga0501032_0012651 | 3300049569 | Bacteria | 6018 |
| 181 | Ga0501032_0024987 | 3300049569 | Bacteria | 4121 |
| 182 | Ga0501032_0042839 | 3300049569 | Bacteria | 3069 |
| 183 | Ga0501034_0000543 | 3300049571 | Bacteria | 60025 |
| 184 | Ga0501034_0010619 | 3300049571 | Bacteria | 9583 |
| 185 | Ga0501036_0002530 | 3300049572 | Bacteria | 14358 |
| 186 | Ga0501037_0001123 | 3300049573 | Bacteria | 19813 |
| 187 | Ga0501038_0006115 | 3300049574 | Bacteria | 11140 |
| 188 | Ga0501039_0001048 | 3300049575 | Bacteria | 20241 |
| 189 | Ga0501043_0000606 | 3300049579 | Bacteria | 31710 |
| 190 | Ga0501047_0009481 | 3300049581 | Bacteria | 9198 |
| 191 | Ga0501047_0054442 | 3300049581 | Bacteria | 3870 |
| 192 | Ga0501070_0008956 | 3300049586 | Bacteria | 8464 |
| 193 | Ga0501070_0014805 | 3300049586 | Bacteria | 6564 |
| 194 | Ga0501080_0039052 | 3300049742 | Bacteria | 4430 |
| 195 | Ga0501035_0035196 | 3300049822 | Bacteria | 4545 |
| 196 | Ga0501044_0001612 | 3300049823 | Bacteria | 26422 |
| 197 | Ga0501044_0007475 | 3300049823 | Bacteria | 12017 |
| 198 | Ga0501044_0128830 | 3300049823 | Bacteria | 2526 |
| 199 | nmdc:mga03n38_2624_c1 | 3300050490 | Bacteria | 5606 |
| 200 | nmdc:mga03n38_40031_c1 | 3300050490 | Bacteria | 2035 |
| 201 | nmdc:mga00v17_3766_c1 | 3300050491 | Bacteria | 7829 |
| 202 | nmdc:mga00v17_41470_c1 | 3300050491 | Bacteria | 2765 |
| 203 | nmdc:mga00v17_52108_c1 | 3300050491 | Bacteria | 2489 |
| 204 | nmdc:mga0yw44_2056_c1 | 3300050492 | Bacteria | 8398 |
| 205 | nmdc:mga0yw44_44523_c1 | 3300050492 | Bacteria | 2655 |
| 206 | nmdc:mga07m45_12727_c1 | 3300050496 | Bacteria | 4449 |
| 207 | nmdc:mga07m45_27522_c2 | 3300050496 | Bacteria | 2579 |
| 208 | nmdc:mga06r32_35109_c1 | 3300050510 | Bacteria | 4731 |
| 209 | nmdc:mga0sz30_26573_c1 | 3300050516 | Bacteria | 2373 |
| 210 | Ga0500635_0001904 | 3300053080 | Bacteria | 5089 |
| 211 | Ga0500643_004356 | 3300053087 | Bacteria | 6436 |
| 212 | Ga0500643_011307 | 3300053087 | Bacteria | 3263 |
| 213 | Ga0500556_0002555 | 3300053104 | Bacteria | 5757 |
| 214 | Ga0500562_004810 | 3300053108 | Bacteria | 3402 |
| 215 | Ga0500573_0011541 | 3300053140 | Bacteria | 4949 |
| 216 | Ga0500604_0025124 | 3300053151 | Bacteria | 1711 |
| 217 | Ga0500616_0005278 | 3300053153 | Bacteria | 8830 |
| 218 | Ga0500616_0023959 | 3300053153 | Bacteria | 3397 |
| 219 | Ga0500645_000128 | 3300053730 | Bacteria | 59444 |
| 220 | 2548694802 | 2547132424 | Bacteria | 8348532 |
| 221 | 2552107485 | 2551306166 | Bacteria | 9731570 |
| 222 | 2566997447 | 2565956761 | Bacteria | 6601618 |
| 223 | 2644488698 | 2643221687 | Bacteria | 6500351 |
| 224 | 2644518149 | 2643221692 | Bacteria | 7282860 |
| 225 | 2644636680 | 2643221715 | Bacteria | 6671032 |
| 226 | 2738664991 | 2738541264 | Bacteria | 5935393 |
| 227 | 2738708140 | 2738541274 | Bacteria | 6909446 |
| 228 | 2739144125 | 2738541356 | Bacteria | 5935017 |
| 229 | 2739203824 | 2738543005 | Bacteria | 5278128 |
| 230 | 2739239379 | 2738543011 | Bacteria | 5731169 |
| 231 | 2739334707 | 2738543028 | Bacteria | 6917070 |
| 232 | 2739366847 | 2738543034 | Bacteria | 6084756 |
| 233 | 2753327281 | 2751185792 | Bacteria | 5739090 |
| 234 | 2842889539 | 2842888712 | Bacteria | 4279094 |
| 235 | 2889301986 | 2889300758 | Bacteria | 5690814 |
| 236 | 2902795780 | 2902792274 | Bacteria | 7270173 |
| 237 | 2902803826 | 2902799365 | Bacteria | 5419524 |
| 238 | 2902838582 | 2902837492 | Bacteria | 6697721 |
| 239 | 2904540341 | 2904535858 | Bacteria | 6308016 |
| 240 | 2904769226 | 2904765812 | Bacteria | 5369154 |
| 241 | 2904776326 | 2904770941 | Bacteria | 5580202 |
| 242 | 2908814412 | 2908811453 | Bacteria | 5478616 |
| 243 | 2918508221 | 2918501144 | Bacteria | 8668083 |
| 244 | 2919422853 | 2919420072 | Bacteria | 5390363 |
| 245 | 2919434894 | 2919432681 | Bacteria | 5390474 |
| 246 | 2919718910 | 2919713450 | Bacteria | 7431245 |
| 247 | 2922556370 | 2922554459 | Bacteria | 6683962 |
| 248 | 2928147272 | 2928142448 | Bacteria | 5288925 |
| 249 | 2939589363 | 2939582691 | Bacteria | 7088898 |
| 250 | 2939748193 | 2939743619 | Bacteria | 5762299 |
| 251 | 2974317798 | 2974315732 | Bacteria | 4602776 |
| 252 | 2984526008 | 2984523437 | Bacteria | 4508481 |
| 253 | Ga0068853_100084008 | |||
| 254 | JGI24751J29686_10003535 | |||
| 255 | Ga0055540_1000211 | |||
| 256 | Ga0055540_1002263 | |||
| 257 | Ga0055540_1004357 | |||
| 258 | Ga0070668_100023898 | |||
| 259 | Ga0070669_100016456 | |||
| 260 | Ga0070671_100000370 | |||
| 261 | Ga0070667_100000562 | |||
| 262 | Ga0070667_100001312 | |||
| 263 | Ga0070678_100040251 | |||
| 264 | Ga0070665_100027875 | |||
| 265 | Ga0070665_100126619 | |||
| 266 | Ga0070664_100164481 | |||
| 267 | Ga0068859_100000984 | |||
| 268 | Ga0068863_100002213 | |||
| 269 | Ga0068863_100016151 | |||
| 270 | Ga0068858_100261670 | |||
| 271 | Ga0068860_100000112 | |||
| 272 | Ga0068862_100001577 | |||
| 273 | Ga0081538_10044028 | |||
| 274 | Ga0075363_100002130 | |||
| 275 | Ga0075363_100003796 | |||
| 276 | Ga0075363_100006843 | |||
| 277 | Ga0075364_10010512 | |||
| 278 | Ga0075364_10014036 | |||
| 279 | Ga0075364_10041589 | |||
| 280 | Ga0075364_10052708 | |||
| 281 | Ga0075362_10012663 | |||
| 282 | Ga0075370_10002357 | |||
| 283 | Ga0075370_10012907 | |||
| 284 | Ga0075370_10020119 | |||
| 285 | Ga0075431_100032457 | |||
| 286 | Ga0097620_100000984 | |||
| 287 | Ga0105245_10125950 | |||
| 288 | Ga0105247_10000007 | |||
| 289 | Ga0105243_10002698 | |||
| 290 | Ga0105248_10002480 | |||
| 291 | Ga0105237_10002337 | |||
| 292 | Ga0105237_10046779 | |||
| 293 | Ga0105249_10000001 | |||
| 294 | Ga0105239_10046641 | |||
| 295 | Ga0163163_10039156 | |||
| 296 | Ga0157376_10092929 | |||
| 297 | Ga0213876_10003457 | |||
| 298 | Ga0213876_10023788 | |||
| 299 | Ga0213876_10037503 | |||
| 300 | Ga0213875_10037287 | |||
| 301 | Ga0209051_1000011 | |||
| 302 | Ga0209051_1000795 | |||
| 303 | Ga0209051_1002207 | |||
| 304 | Ga0209051_1018647 | |||
| 305 | Ga0207710_10000013 | |||
| 306 | Ga0207647_10032567 | |||
| 307 | Ga0207643_10140715 | |||
| 308 | Ga0207671_10045100 | |||
| 309 | Ga0207681_10011452 | |||
| 310 | Ga0207700_10221377 | |||
| 311 | Ga0207664_10037744 | |||
| 312 | Ga0207664_10089635 | |||
| 313 | Ga0207664_10135685 | |||
| 314 | Ga0207644_10009434 | |||
| 315 | Ga0207709_10001743 | |||
| 316 | Ga0207711_10001465 | |||
| 317 | Ga0207712_10000006 | |||
| 318 | Ga0207668_10001742 | |||
| 319 | Ga0207658_10000970 | |||
| 320 | Ga0207658_10003490 | |||
| 321 | Ga0207658_10169019 | |||
| 322 | Ga0207703_10096664 | |||
| 323 | Ga0207678_10008631 | |||
| 324 | Ga0207641_10036347 | |||
| 325 | Ga0207683_10123342 | |||
| 326 | Ga0268266_10007851 | |||
| 327 | Ga0268266_10026901 | |||
| 328 | Ga0268265_10000016 | |||
| 329 | Ga0268264_10000026 | |||
| 330 | Ga0265327_10000041 | |||
| 331 | Ga0265327_10000138 | |||
| 332 | Ga0265327_10001529 | |||
| 333 | Ga0265327_10047280 | |||
| 334 | Ga0307513_10009318 | |||
| 335 | Ga0307508_10069136 | |||
| 336 | Ga0307405_10018950 | |||
| 337 | Ga0307410_10055719 | |||
| 338 | Ga0307410_10124363 | |||
| 339 | Ga0307416_100062987 | |||
| 340 | Ga0307415_100177554 | |||
| 341 | Ga0307507_10086599 | |||
| 342 | Ga0436364_0435413 | |||
| 343 | Ga0436364_1141707 | |||
| 344 | Ga0436364_1264961 | |||
| 345 | Ga0436365_0093819 | |||
| 346 | Ga0436365_0885952 | |||
| 347 | Ga0436365_1103670 | |||
| 348 | Ga0436365_1214067 | |||
| 349 | Ga0436363_1541032 | |||
| 350 | Ga0439466_0014217 | |||
| 351 | Ga0439466_0031325 | |||
| 352 | Ga0439465_0003314 | |||
| 353 | Ga0439465_0018417 | |||
| 354 | Ga0439431_0000706 | |||
| 355 | Ga0466969_0020846 | |||
| 356 | Ga0466965_0005508 | |||
| 357 | Ga0466965_0047156 | |||
| 358 | Ga0466963_0025361 | |||
| 359 | Ga0466963_0065792 | |||
| 360 | Ga0466971_0037403 | |||
| 361 | Ga0466970_0038384 | |||
| 362 | Ga0466957_0002721 | |||
| 363 | Ga0466957_0017488 | |||
| 364 | Ga0466957_0116934 | |||
| 365 | Ga0466957_0264864 | |||
| 366 | Ga0466960_0002617 | |||
| 367 | Ga0466959_0037338 | |||
| 368 | Ga0466958_0000748 | |||
| 369 | Ga0466958_0048008 | |||
| 370 | Ga0466967_0019422 | |||
| 371 | Ga0466967_0022467 | |||
| 372 | Ga0466967_0101875 | |||
| 373 | Ga0466967_0174339 | |||
| 374 | Ga0495638_0001596 | |||
| 375 | Ga0495648_0000977 | |||
| 376 | Ga0495665_0038624 | |||
| 377 | Ga0495668_0002662 | |||
| 378 | Ga0495668_0030624 | |||
| 379 | Ga0495625_0121049 | |||
| 380 | Ga0495672_0001236 | |||
| 381 | Ga0495672_0045682 | |||
| 382 | Ga0495673_0002507 | |||
| 383 | Ga0495686_0003794 | |||
| 384 | Ga0496100_0000335 | |||
| 385 | Ga0496100_0003473 | |||
| 386 | Ga0496100_0003744 | |||
| 387 | Ga0496101_0000193 | |||
| 388 | Ga0496101_0027998 | |||
| 389 | Ga0496101_0028901 | |||
| 390 | Ga0496101_0083690 | |||
| 391 | Ga0496102_0000403 | |||
| 392 | Ga0496102_0000750 | |||
| 393 | Ga0496102_0046553 | |||
| 394 | Ga0496102_0226400 | |||
| 395 | Ga0496103_0000284 | |||
| 396 | Ga0496103_0001055 | |||
| 397 | Ga0496103_0003680 | |||
| 398 | Ga0496103_0173404 | |||
| 399 | Ga0496104_0010339 | |||
| 400 | Ga0496104_0056317 | |||
| 401 | Ga0496105_0006336 | |||
| 402 | Ga0496106_0011075 | |||
| 403 | Ga0496106_0014163 | |||
| 404 | Ga0496108_0046352 | |||
| 405 | Ga0496109_0010792 | |||
| 406 | Ga0496109_0081986 | |||
| 407 | Ga0496110_0023289 | |||
| 408 | Ga0496112_0022493 | |||
| 409 | Ga0496113_0006724 | |||
| 410 | Ga0496114_0051708 | |||
| 411 | Ga0496115_0000813 | |||
| 412 | Ga0496115_0111866 | |||
| 413 | Ga0496116_0000059 | |||
| 414 | Ga0496116_0049096 | |||
| 415 | Ga0496117_0000055 | |||
| 416 | Ga0496117_0003028 | |||
| 417 | Ga0496117_0017364 | |||
| 418 | Ga0496118_0000879 | |||
| 419 | Ga0496118_0002102 | |||
| 420 | Ga0496118_0009080 | |||
| 421 | Ga0496119_0044985 | |||
| 422 | Ga0496120_0018547 | |||
| 423 | Ga0496120_0033499 | |||
| 424 | Ga0496120_0050033 | |||
| 425 | Ga0496121_0001114 | |||
| 426 | Ga0496121_0007638 | |||
| 427 | Ga0496125_0107543 | |||
| 428 | Ga0496126_0009388 | |||
| 429 | Ga0496126_0010164 | |||
| 430 | Ga0496126_0022552 | |||
| 431 | Ga0496126_0093059 | |||
| 432 | Ga0501032_0012651 | |||
| 433 | Ga0501032_0024987 | |||
| 434 | Ga0501032_0042839 | |||
| 435 | Ga0501034_0000543 | |||
| 436 | Ga0501034_0010619 | |||
| 437 | Ga0501036_0002530 | |||
| 438 | Ga0501037_0001123 | |||
| 439 | Ga0501038_0006115 | |||
| 440 | Ga0501039_0001048 | |||
| 441 | Ga0501043_0000606 | |||
| 442 | Ga0501047_0009481 | |||
| 443 | Ga0501047_0054442 | |||
| 444 | Ga0501070_0008956 | |||
| 445 | Ga0501070_0014805 | |||
| 446 | Ga0501080_0039052 | |||
| 447 | Ga0501035_0035196 | |||
| 448 | Ga0501044_0001612 | |||
| 449 | Ga0501044_0007475 | |||
| 450 | Ga0501044_0128830 | |||
| 451 | nmdc:mga03n38_2624_c1 | |||
| 452 | nmdc:mga03n38_40031_c1 | |||
| 453 | nmdc:mga00v17_3766_c1 | |||
| 454 | nmdc:mga00v17_41470_c1 | |||
| 455 | nmdc:mga00v17_52108_c1 | |||
| 456 | nmdc:mga0yw44_2056_c1 | |||
| 457 | nmdc:mga0yw44_44523_c1 | |||
| 458 | nmdc:mga07m45_12727_c1 | |||
| 459 | nmdc:mga07m45_27522_c2 | |||
| 460 | nmdc:mga06r32_35109_c1 | |||
| 461 | nmdc:mga0sz30_26573_c1 | |||
| 462 | Ga0500635_0001904 | |||
| 463 | Ga0500643_004356 | |||
| 464 | Ga0500643_011307 | |||
| 465 | Ga0500556_0002555 | |||
| 466 | Ga0500562_004810 | |||
| 467 | Ga0500573_0011541 | |||
| 468 | Ga0500604_0025124 | |||
| 469 | Ga0500616_0005278 | |||
| 470 | Ga0500616_0023959 | |||
| 471 | Ga0500645_000128 | |||
| 472 | 2548694802 | |||
| 473 | 2552107485 | |||
| 474 | 2566997447 | |||
| 475 | 2644488698 | |||
| 476 | 2644518149 | |||
| 477 | 2644636680 | |||
| 478 | 2738664991 | |||
| 479 | 2738708140 | |||
| 480 | 2739144125 | |||
| 481 | 2739203824 | |||
| 482 | 2739239379 | |||
| 483 | 2739334707 | |||
| 484 | 2739366847 | |||
| 485 | 2753327281 | |||
| 486 | 2842889539 | |||
| 487 | 2889301986 | |||
| 488 | 2902795780 | |||
| 489 | 2902803826 | |||
| 490 | 2902838582 | |||
| 491 | 2904540341 | |||
| 492 | 2904769226 | |||
| 493 | 2904776326 | |||
| 494 | 2908814412 | |||
| 495 | 2918508221 | |||
| 496 | 2919422853 | |||
| 497 | 2919434894 | |||
| 498 | 2919718910 | |||
| 499 | 2922556370 | |||
| 500 | 2928147272 | |||
| 501 | 2939589363 | |||
| 502 | 2939748193 | |||
| 503 | 2974317798 | |||
| 504 | 2984526008 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3it4-assembly1.cif.gz_B | the crystal structure of ornithine acetyltransferase from mycobacterium tuberculosis (rv1653) at 1.7 a | 0.961 | 197 | 378 |
| 3it4-assembly1.cif.gz_D | the crystal structure of ornithine acetyltransferase from mycobacterium tuberculosis (rv1653) at 1.7 a | 0.9599 | 197 | 378 |
| 3it6-assembly1.cif.gz_C | the crystal structure of ornithine acetyltransferase complexed with ornithine from mycobacterium tuberculosis (rv1653) at 2.4 a | 0.9397 | 7 | 196 |
| 3it6-assembly1.cif.gz_C | the crystal structure of ornithine acetyltransferase complexed with ornithine from mycobacterium tuberculosis (rv1653) at 2.4 a | 0.9207 | 7 | 196 |
| 2yep-assembly2.cif.gz_D | structure of an n-terminal nucleophile (ntn) hydrolase, oat2, in complex with glutamate | 0.9061 | 197 | 378 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3it4D02 | Alpha Beta;Roll;Ubiquitin-like (UB roll);ArgJ beta chain, C-terminal domain | 0.9678 | 257 | 378 | 3.10.20.340 |
| 3it4D02 | Alpha Beta;Roll;Ubiquitin-like (UB roll);ArgJ beta chain, C-terminal domain | 0.9519 | 257 | 378 | 3.10.20.340 |
| af_P9WPZ3_1_199_3.60.70.12 | Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase | 0.9399 | 7 | 196 | 3.60.70.12 |
| af_P9WPZ3_1_199_3.60.70.12 | Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase | 0.8935 | 7 | 196 | 3.60.70.12 |
| af_Q54DY1_296_442_3.10.20.340 | Alpha Beta;Roll;Ubiquitin-like (UB roll);ArgJ beta chain, C-terminal domain | 0.8934 | 257 | 382 | 3.10.20.340 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A838S9W5-F1-model_v4 | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase | 0.9894 | 16 | 119 |
GO:0004042
GO:0004358 GO:0006526 GO:0006592 |
| AF-X8DTP8-F1-model_v4 | Arginine biosynthesis bifunctional protein ArgJ [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGSase)] | 0.9892 | 9 | 153 |
GO:0004042
GO:0004358 GO:0005737 GO:0006526 GO:0006592 |
| AF-A0A6B3HA74-F1-model_v4 | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase | 0.9848 | 14 | 104 |
GO:0004042
GO:0004358 GO:0006526 GO:0006592 |
| AF-A0A6B3HA74-F1-model_v4 | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase | 0.9743 | 14 | 104 |
GO:0004042
GO:0004358 GO:0006526 GO:0006592 |
| AF-A0A2S8BE12-F1-model_v4 | Arginine biosynthesis bifunctional protein ArgJ [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGSase)] | 0.9722 | 7 | 189 |
GO:0004042
GO:0004358 GO:0005737 GO:0006526 GO:0006592 |