F363007

General Info

Members Datasets Scaffolds Average Seq Length
252 158 504 300

Family's Representative Sequence

Representative Sequence 3300005356|Ga0070674_100167876|Ga0070674_1001678761
Length 335
Sequence VTRSTLPHANRRSSSLALYRREVSVAGAIALLGVVLGFAAPGYFSRANLGDLFLANLPVLIVALGATLIVVSGEIDISVGSVFAVCSVLSGIAAKTGLPMPAVMLVVLLAGAALGAINGALVAHLRLPSIVVTLATMVILREGLRWLTQGAWVQDLPAGYQWLGLSQGAYPIAALLVSGGLFAAMAWSAAHLAAGRAIYATGSNPDAARLAGFDTGFVKWAVFTGAGALTGLAALLNSVRFNQIPSNAGLGLEMKVIAAVIVGGTAIRGGRGTFVGTLLGVILLGAIGPALTFLGVNAYWERAIQGAIILTAVAVDAWRQRPPTHARALAAGAGA

Samples

Sample ID Description Type Environment
1 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
52 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
80 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
81 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
82 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
83 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
84 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
85 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
86 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
87 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
88 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
89 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
90 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
91 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
94 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
95 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
96 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
100 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
101 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
102 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
103 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
104 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
105 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
106 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
107 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
108 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
109 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
110 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
111 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
112 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
113 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
114 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
117 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
118 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
132 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
135 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
138 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
141 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
148 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
149 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
155 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
156 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 2884215851 Edaphobacter sp. 12200R-103 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.6
Metatranscriptomes 0
Isolates 0.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.19
Nodule 0
Rhizoplane 3.17
Rhizosphere 94.84
Stem 0
Stem Tuber 0
Unclassified 5.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070674_100167876 3300005356 Bacteria 1671
2 Ga0065712_10189787 3300005290 Bacteria 1153
3 Ga0065715_10269947 3300005293 Bacteria 1114
4 Ga0070658_10039293 3300005327 Bacteria 3817
5 Ga0070683_100167791 3300005329 Bacteria 2083
6 Ga0070690_100064805 3300005330 Bacteria 2361
7 Ga0070670_100001698 3300005331 Bacteria 17918
8 Ga0068869_100117241 3300005334 Bacteria 2032
9 Ga0070689_100087876 3300005340 Bacteria 2446
10 Ga0070689_100129310 3300005340 Bacteria 2024
11 Ga0070689_100140081 3300005340 Unclassified 1945
12 Ga0070675_100271997 3300005354 Bacteria 1487
13 Ga0070714_100014264 3300005435 Bacteria 6382
14 Ga0070713_100007088 3300005436 Bacteria 7835
15 Ga0070713_100018642 3300005436 Bacteria 5276
16 Ga0070694_100194094 3300005444 Bacteria 1510
17 Ga0070708_100029100 3300005445 Bacteria 4762
18 Ga0070708_100042527 3300005445 Bacteria 3989
19 Ga0070708_100288377 3300005445 Bacteria 1545
20 Ga0070678_100415039 3300005456 Bacteria 1172
21 Ga0070685_10019358 3300005466 Bacteria 3671
22 Ga0070685_10110083 3300005466 Bacteria 1695
23 Ga0070707_100004238 3300005468 Bacteria 13424
24 Ga0070698_100133506 3300005471 Bacteria 2437
25 Ga0070699_100008670 3300005518 Bacteria 8813
26 Ga0070699_100194985 3300005518 Unclassified 1800
27 Ga0070686_100120746 3300005544 Bacteria 1799
28 Ga0070695_100018375 3300005545 Bacteria 4246
29 Ga0068855_100059534 3300005563 Bacteria 4468
30 Ga0068854_100144489 3300005578 Bacteria 1829
31 Ga0068854_100225642 3300005578 Bacteria 1484
32 Ga0068861_100033255 3300005719 Bacteria 3803
33 Ga0068861_100052871 3300005719 Bacteria 3089
34 Ga0068861_100072253 3300005719 Bacteria 2676
35 Ga0068870_10045410 3300005840 Bacteria 2300
36 Ga0068860_100124635 3300005843 Bacteria 2469
37 Ga0081539_10031129 3300005985 Bacteria 3295
38 Ga0070717_10331737 3300006028 Bacteria 1357
39 Ga0075365_10045429 3300006038 Bacteria 2881
40 Ga0075428_100017355 3300006844 Bacteria 7955
41 Ga0075428_100023034 3300006844 Bacteria 6893
42 Ga0075428_100086734 3300006844 Bacteria 3414
43 Ga0075428_100119642 3300006844 Bacteria 2867
44 Ga0075430_100029902 3300006846 Bacteria 4625
45 Ga0075430_100033734 3300006846 Bacteria 4344
46 Ga0075430_100142101 3300006846 Bacteria 1999
47 Ga0075430_100150052 3300006846 Bacteria 1941
48 Ga0075431_100000825 3300006847 Bacteria 27053
49 Ga0075431_100016115 3300006847 Bacteria 7583
50 Ga0075431_100041324 3300006847 Bacteria 4753
51 Ga0075431_100088366 3300006847 Bacteria 3198
52 Ga0075431_100169854 3300006847 Bacteria 2241
53 Ga0075431_100181023 3300006847 Bacteria 2163
54 Ga0075433_10031155 3300006852 Bacteria 4556
55 Ga0075433_10057330 3300006852 Bacteria 3404
56 Ga0075433_10060748 3300006852 Bacteria 3310
57 Ga0075434_100029845 3300006871 Bacteria 5367
58 Ga0075434_100164417 3300006871 Bacteria 2239
59 Ga0075434_100172804 3300006871 Unclassified 2181
60 Ga0075434_100195757 3300006871 Bacteria 2041
61 Ga0075429_100010903 3300006880 Bacteria 7863
62 Ga0075436_100072235 3300006914 Bacteria 2387
63 Ga0075435_100003278 3300007076 Bacteria 10965
64 Ga0075435_100041850 3300007076 Bacteria 3663
65 Ga0075435_100042779 3300007076 Bacteria 3624
66 Ga0105240_10027721 3300009093 Bacteria 7413
67 Ga0105240_10063409 3300009093 Bacteria 4597
68 Ga0111539_10000002 3300009094 Bacteria 983359
69 Ga0111539_10028702 3300009094 Bacteria 6786
70 Ga0111539_10047179 3300009094 Bacteria 5150
71 Ga0111539_10192478 3300009094 Bacteria 2379
72 Ga0111539_10220040 3300009094 Bacteria 2211
73 Ga0111539_10344777 3300009094 Bacteria 1734
74 Ga0111539_10495490 3300009094 Bacteria 1423
75 Ga0114129_10004454 3300009147 Bacteria 19770
76 Ga0114129_10004883 3300009147 Bacteria 18917
77 Ga0114129_10005068 3300009147 Bacteria 18543
78 Ga0114129_10054162 3300009147 Bacteria 5625
79 Ga0114129_10107104 3300009147 Bacteria 3861
80 Ga0114129_10112702 3300009147 Bacteria 3751
81 Ga0114129_10818406 3300009147 Unclassified 1187
82 Ga0105242_10067652 3300009176 Bacteria 2954
83 Ga0105249_10324798 3300009553 Bacteria 1551
84 Ga0105239_10268735 3300010375 Bacteria 1917
85 Ga0157378_10009878 3300013297 Bacteria 8316
86 Ga0157378_10164095 3300013297 Bacteria 2080
87 Ga0157372_10329986 3300013307 Bacteria 1776
88 Ga0157372_10354526 3300013307 Unclassified 1709
89 Ga0157375_10478444 3300013308 Bacteria 1410
90 Ga0163163_11058129 3300014325 Unclassified 874
91 Ga0157380_10353992 3300014326 Bacteria 1375
92 Ga0157379_10223990 3300014968 Bacteria 1704
93 Ga0157376_10132518 3300014969 Bacteria 2226
94 Ga0209233_1007128 3300025261 Bacteria 3563
95 Ga0207680_10321723 3300025903 Bacteria 1082
96 Ga0207643_10088178 3300025908 Bacteria 1805
97 Ga0207695_10172434 3300025913 Bacteria 2088
98 Ga0207693_10236295 3300025915 Bacteria 1435
99 Ga0207663_10013019 3300025916 Bacteria 4511
100 Ga0207646_10003793 3300025922 Bacteria 16822
101 Ga0207650_10030460 3300025925 Bacteria 3887
102 Ga0207659_10305191 3300025926 Bacteria 1309
103 Ga0207700_10004064 3300025928 Bacteria 8577
104 Ga0207664_10004814 3300025929 Bacteria 9177
105 Ga0207644_10099236 3300025931 Bacteria 2185
106 Ga0207686_10241751 3300025934 Unclassified 1314
107 Ga0207670_10019595 3300025936 Bacteria 4135
108 Ga0207670_10128605 3300025936 Unclassified 1852
109 Ga0207669_10058945 3300025937 Bacteria 2346
110 Ga0207669_10101281 3300025937 Bacteria 1905
111 Ga0207669_10141031 3300025937 Bacteria 1673
112 Ga0207689_10123343 3300025942 Bacteria 2131
113 Ga0207712_10402706 3300025961 Bacteria 1150
114 Ga0207640_10027668 3300025981 Bacteria 3458
115 Ga0207708_10274888 3300026075 Bacteria 1363
116 Ga0207675_100029796 3300026118 Bacteria 5081
117 Ga0207675_100099418 3300026118 Bacteria 2740
118 Ga0207683_10053602 3300026121 Bacteria 3537
119 Ga0207428_10000026 3300027907 Bacteria 255539
120 Ga0207428_10133441 3300027907 Bacteria 1899
121 Ga0268266_10027837 3300028379 Bacteria 4805
122 Ga0307408_100014954 3300031548 Bacteria 5164
123 Ga0307408_100095264 3300031548 Bacteria 2256
124 Ga0265314_10020905 3300031711 Bacteria 5045
125 Ga0307406_10014584 3300031901 Unclassified 4525
126 Ga0307412_10223826 3300031911 Bacteria 1444
127 Ga0307416_100035162 3300032002 Bacteria 3822
128 Ga0307411_10032786 3300032005 Bacteria 3214
129 Ga0307411_10059342 3300032005 Unclassified 2536
130 Ga0373938_0000243 3300034957 Bacteria 8516
131 Ga0373940_0004873 3300035088 Bacteria 2866
132 Ga0373949_0003330 3300035090 Bacteria 3858
133 Ga0373951_0000418 3300035091 Bacteria 12463
134 Ga0373932_0000709 3300035112 Bacteria 10043
135 Ga0373939_0000900 3300035114 Bacteria 7389
136 Ga0373941_0007338 3300035115 Bacteria 2694
137 Ga0373942_0006415 3300035207 Bacteria 2716
138 Ga0373961_0000842 3300035241 Bacteria 10387
139 Ga0373931_0000988 3300035691 Bacteria 12019
140 Ga0373927_0213589 3300035695 Bacteria 1267
141 Ga0373947_0010988 3300035725 Bacteria 5193
142 Ga0373937_0009251 3300036401 Bacteria 8554
143 Ga0373937_0018558 3300036401 Bacteria 6214
144 Ga0373937_0043646 3300036401 Bacteria 4094
145 Ga0373937_0490834 3300036401 Bacteria 1167
146 Ga0373925_0001578 3300037068 Bacteria 19285
147 Ga0439464_0001799 3300042439 Bacteria 5175
148 Ga0451576_0224027 3300045051 Bacteria 1964
149 Ga0451576_0492137 3300045051 Bacteria 1288
150 Ga0495603_0031154 3300046455 Bacteria 3211
151 Ga0495650_0001759 3300046471 Bacteria 19660
152 Ga0495628_0130348 3300046516 Bacteria 1923
153 Ga0495628_0223405 3300046516 Bacteria 1414
154 Ga0495645_0012641 3300046543 Bacteria 5953
155 Ga0495645_0347849 3300046543 Bacteria 956
156 Ga0495667_0042750 3300046559 Bacteria 3005
157 Ga0495625_0000845 3300046660 Bacteria 41840
158 Ga0495625_0065608 3300046660 Unclassified 2559
159 Ga0495623_0011035 3300046679 Bacteria 5845
160 Ga0495646_0085997 3300046680 Bacteria 1824
161 Ga0495581_0105105 3300047315 Bacteria 1641
162 Ga0495604_0009647 3300047317 Bacteria 7633
163 Ga0495674_0002222 3300047319 Bacteria 19095
164 Ga0495674_0038448 3300047319 Bacteria 4295
165 Ga0495674_0251622 3300047319 Bacteria 1454
166 Ga0495672_0009371 3300047320 Bacteria 7101
167 Ga0495684_0003834 3300047471 Bacteria 11712
168 Ga0495684_0057641 3300047471 Bacteria 2960
169 Ga0495686_0005831 3300047472 Bacteria 9606
170 Ga0495686_0021076 3300047472 Plasmid 4336
171 Ga0495686_0070058 3300047472 Bacteria 2161
172 Ga0495686_0155343 3300047472 Bacteria 1340
173 Ga0496100_0195883 3300048903 Bacteria 1470
174 Ga0496103_0024318 3300048906 Bacteria 3656
175 Ga0496104_0000031 3300048907 Bacteria 194537
176 Ga0496105_0274068 3300048908 Bacteria 1362
177 Ga0496106_0022909 3300048909 Bacteria 4639
178 Ga0496106_0100697 3300048909 Bacteria 2241
179 Ga0496109_0412601 3300048912 Bacteria 1276
180 Ga0496110_0050529 3300048913 Bacteria 3651
181 Ga0496126_0000068 3300048929 Bacteria 248663
182 Ga0496126_0001559 3300048929 Bacteria 35191
183 Ga0501031_0124504 3300049568 Bacteria 1684
184 Ga0501031_0155745 3300049568 Bacteria 1493
185 Ga0501032_0005304 3300049569 Bacteria 9587
186 Ga0501032_0355543 3300049569 Unclassified 943
187 Ga0501034_0020042 3300049571 Bacteria 6831
188 Ga0501036_0034682 3300049572 Bacteria 4268
189 Ga0501036_0463148 3300049572 Bacteria 1056
190 Ga0501037_0006587 3300049573 Bacteria 8494
191 Ga0501038_0003373 3300049574 Bacteria 14898
192 Ga0501042_0125044 3300049578 Bacteria 1852
193 Ga0501043_0003461 3300049579 Bacteria 12962
194 Ga0501046_0000496 3300049580 Bacteria 39220
195 Ga0501047_0002129 3300049581 Bacteria 18958
196 Ga0501071_0117399 3300049587 Bacteria 1970
197 Ga0501072_0015075 3300049588 Bacteria 5928
198 Ga0501072_0106943 3300049588 Bacteria 2225
199 Ga0501072_0243978 3300049588 Bacteria 1431
200 Ga0501073_0014371 3300049589 Bacteria 5752
201 Ga0501074_0023009 3300049590 Bacteria 4532
202 Ga0501075_0093028 3300049591 Bacteria 2289
203 Ga0501075_0114200 3300049591 Bacteria 2053
204 Ga0501076_0114495 3300049592 Bacteria 2182
205 Ga0501077_0068180 3300049593 Bacteria 2255
206 Ga0501217_013408 3300049661 Bacteria 1840
207 Ga0501080_0241172 3300049742 Bacteria 1650
208 Ga0501080_0420990 3300049742 Bacteria 1200
209 Ga0501080_0512313 3300049742 Unclassified 1071
210 Ga0501081_0155781 3300049743 Bacteria 1644
211 Ga0501035_0003648 3300049822 Bacteria 14684
212 Ga0501044_0002923 3300049823 Bacteria 19432
213 Ga0501044_0602755 3300049823 Bacteria 991
214 Ga0501045_0202591 3300049824 Bacteria 1478
215 nmdc:mga0yw44_10429_c1 3300050492 Bacteria 4746
216 nmdc:mga05p37_11425_c1 3300050507 Bacteria 10571
217 nmdc:mga05p37_293927_c1 3300050507 Unclassified 1933
218 nmdc:mga05p37_3754_c1 3300050507 Bacteria 17774
219 nmdc:mga05p37_381934_c1 3300050507 Bacteria 1650
220 nmdc:mga05p37_43039_c1 3300050507 Bacteria 5552
221 nmdc:mga05p37_57979_c1 3300050507 Bacteria 4769
222 nmdc:mga05p37_73612_c1 3300050507 Bacteria 4204
223 nmdc:mga09592_124722_c1 3300050508 Bacteria 2213
224 nmdc:mga09592_222362_c1 3300050508 Bacteria 1635
225 nmdc:mga09592_23348_c1 3300050508 Bacteria 5108
226 nmdc:mga0qj67_178455_c1 3300050509 Bacteria 1725
227 nmdc:mga0qj67_244392_c1 3300050509 Bacteria 1456
228 nmdc:mga06r32_161043_c1 3300050510 Bacteria 2227
229 nmdc:mga06r32_34106_c1 3300050510 Bacteria 4798
230 nmdc:mga06r32_382032_c1 3300050510 Bacteria 1391
231 nmdc:mga06r32_40998_c1 3300050510 Bacteria 4397
232 nmdc:mga08y16_130845_c1 3300050511 Bacteria 2609
233 nmdc:mga08y16_2_c1 3300050511 Bacteria 983367
234 nmdc:mga08y16_44721_c1 3300050511 Bacteria 4640
235 nmdc:mga0n895_213783_c1 3300050512 Bacteria 1958
236 nmdc:mga0n895_51960_c1 3300050512 Bacteria 4022
237 nmdc:mga0n895_616344_c1 3300050512 Bacteria 1086
238 nmdc:mga0rr50_1995_c1 3300050513 Bacteria 11348
239 nmdc:mga0rr50_27252_c1 3300050513 Bacteria 3998
240 nmdc:mga08x19_2115_c1 3300050514 Bacteria 12136
241 nmdc:mga08x19_804_c1 3300050514 Bacteria 19097
242 nmdc:mga0a205_112498_c1 3300050515 Bacteria 2622
243 nmdc:mga0a205_86320_c1 3300050515 Bacteria 3031
244 Ga0495601_0250351 3300053077 Unclassified 1157
245 Ga0495619_0170692 3300053085 Bacteria 1504
246 Ga0501084_0023326 3300054114 Bacteria 5165
247 Ga0501084_0191088 3300054114 Bacteria 1727
248 Ga0590071_001913 3300059421 Bacteria 5334
249 Ga0590074_000406 3300059423 Bacteria 6181
250 Ga0590075_000173 3300059424 Bacteria 17916
251 Ga0590077_000197 3300059426 Bacteria 17434
252 2884219100 2884215851 Bacteria 4554841
253 Ga0070674_100167876
254 Ga0065712_10189787
255 Ga0065715_10269947
256 Ga0070658_10039293
257 Ga0070683_100167791
258 Ga0070690_100064805
259 Ga0070670_100001698
260 Ga0068869_100117241
261 Ga0070689_100087876
262 Ga0070689_100129310
263 Ga0070689_100140081
264 Ga0070675_100271997
265 Ga0070714_100014264
266 Ga0070713_100007088
267 Ga0070713_100018642
268 Ga0070694_100194094
269 Ga0070708_100029100
270 Ga0070708_100042527
271 Ga0070708_100288377
272 Ga0070678_100415039
273 Ga0070685_10019358
274 Ga0070685_10110083
275 Ga0070707_100004238
276 Ga0070698_100133506
277 Ga0070699_100008670
278 Ga0070699_100194985
279 Ga0070686_100120746
280 Ga0070695_100018375
281 Ga0068855_100059534
282 Ga0068854_100144489
283 Ga0068854_100225642
284 Ga0068861_100033255
285 Ga0068861_100052871
286 Ga0068861_100072253
287 Ga0068870_10045410
288 Ga0068860_100124635
289 Ga0081539_10031129
290 Ga0070717_10331737
291 Ga0075365_10045429
292 Ga0075428_100017355
293 Ga0075428_100023034
294 Ga0075428_100086734
295 Ga0075428_100119642
296 Ga0075430_100029902
297 Ga0075430_100033734
298 Ga0075430_100142101
299 Ga0075430_100150052
300 Ga0075431_100000825
301 Ga0075431_100016115
302 Ga0075431_100041324
303 Ga0075431_100088366
304 Ga0075431_100169854
305 Ga0075431_100181023
306 Ga0075433_10031155
307 Ga0075433_10057330
308 Ga0075433_10060748
309 Ga0075434_100029845
310 Ga0075434_100164417
311 Ga0075434_100172804
312 Ga0075434_100195757
313 Ga0075429_100010903
314 Ga0075436_100072235
315 Ga0075435_100003278
316 Ga0075435_100041850
317 Ga0075435_100042779
318 Ga0105240_10027721
319 Ga0105240_10063409
320 Ga0111539_10000002
321 Ga0111539_10028702
322 Ga0111539_10047179
323 Ga0111539_10192478
324 Ga0111539_10220040
325 Ga0111539_10344777
326 Ga0111539_10495490
327 Ga0114129_10004454
328 Ga0114129_10004883
329 Ga0114129_10005068
330 Ga0114129_10054162
331 Ga0114129_10107104
332 Ga0114129_10112702
333 Ga0114129_10818406
334 Ga0105242_10067652
335 Ga0105249_10324798
336 Ga0105239_10268735
337 Ga0157378_10009878
338 Ga0157378_10164095
339 Ga0157372_10329986
340 Ga0157372_10354526
341 Ga0157375_10478444
342 Ga0163163_11058129
343 Ga0157380_10353992
344 Ga0157379_10223990
345 Ga0157376_10132518
346 Ga0209233_1007128
347 Ga0207680_10321723
348 Ga0207643_10088178
349 Ga0207695_10172434
350 Ga0207693_10236295
351 Ga0207663_10013019
352 Ga0207646_10003793
353 Ga0207650_10030460
354 Ga0207659_10305191
355 Ga0207700_10004064
356 Ga0207664_10004814
357 Ga0207644_10099236
358 Ga0207686_10241751
359 Ga0207670_10019595
360 Ga0207670_10128605
361 Ga0207669_10058945
362 Ga0207669_10101281
363 Ga0207669_10141031
364 Ga0207689_10123343
365 Ga0207712_10402706
366 Ga0207640_10027668
367 Ga0207708_10274888
368 Ga0207675_100029796
369 Ga0207675_100099418
370 Ga0207683_10053602
371 Ga0207428_10000026
372 Ga0207428_10133441
373 Ga0268266_10027837
374 Ga0307408_100014954
375 Ga0307408_100095264
376 Ga0265314_10020905
377 Ga0307406_10014584
378 Ga0307412_10223826
379 Ga0307416_100035162
380 Ga0307411_10032786
381 Ga0307411_10059342
382 Ga0373938_0000243
383 Ga0373940_0004873
384 Ga0373949_0003330
385 Ga0373951_0000418
386 Ga0373932_0000709
387 Ga0373939_0000900
388 Ga0373941_0007338
389 Ga0373942_0006415
390 Ga0373961_0000842
391 Ga0373931_0000988
392 Ga0373927_0213589
393 Ga0373947_0010988
394 Ga0373937_0009251
395 Ga0373937_0018558
396 Ga0373937_0043646
397 Ga0373937_0490834
398 Ga0373925_0001578
399 Ga0439464_0001799
400 Ga0451576_0224027
401 Ga0451576_0492137
402 Ga0495603_0031154
403 Ga0495650_0001759
404 Ga0495628_0130348
405 Ga0495628_0223405
406 Ga0495645_0012641
407 Ga0495645_0347849
408 Ga0495667_0042750
409 Ga0495625_0000845
410 Ga0495625_0065608
411 Ga0495623_0011035
412 Ga0495646_0085997
413 Ga0495581_0105105
414 Ga0495604_0009647
415 Ga0495674_0002222
416 Ga0495674_0038448
417 Ga0495674_0251622
418 Ga0495672_0009371
419 Ga0495684_0003834
420 Ga0495684_0057641
421 Ga0495686_0005831
422 Ga0495686_0021076
423 Ga0495686_0070058
424 Ga0495686_0155343
425 Ga0496100_0195883
426 Ga0496103_0024318
427 Ga0496104_0000031
428 Ga0496105_0274068
429 Ga0496106_0022909
430 Ga0496106_0100697
431 Ga0496109_0412601
432 Ga0496110_0050529
433 Ga0496126_0000068
434 Ga0496126_0001559
435 Ga0501031_0124504
436 Ga0501031_0155745
437 Ga0501032_0005304
438 Ga0501032_0355543
439 Ga0501034_0020042
440 Ga0501036_0034682
441 Ga0501036_0463148
442 Ga0501037_0006587
443 Ga0501038_0003373
444 Ga0501042_0125044
445 Ga0501043_0003461
446 Ga0501046_0000496
447 Ga0501047_0002129
448 Ga0501071_0117399
449 Ga0501072_0015075
450 Ga0501072_0106943
451 Ga0501072_0243978
452 Ga0501073_0014371
453 Ga0501074_0023009
454 Ga0501075_0093028
455 Ga0501075_0114200
456 Ga0501076_0114495
457 Ga0501077_0068180
458 Ga0501217_013408
459 Ga0501080_0241172
460 Ga0501080_0420990
461 Ga0501080_0512313
462 Ga0501081_0155781
463 Ga0501035_0003648
464 Ga0501044_0002923
465 Ga0501044_0602755
466 Ga0501045_0202591
467 nmdc:mga0yw44_10429_c1
468 nmdc:mga05p37_11425_c1
469 nmdc:mga05p37_293927_c1
470 nmdc:mga05p37_3754_c1
471 nmdc:mga05p37_381934_c1
472 nmdc:mga05p37_43039_c1
473 nmdc:mga05p37_57979_c1
474 nmdc:mga05p37_73612_c1
475 nmdc:mga09592_124722_c1
476 nmdc:mga09592_222362_c1
477 nmdc:mga09592_23348_c1
478 nmdc:mga0qj67_178455_c1
479 nmdc:mga0qj67_244392_c1
480 nmdc:mga06r32_161043_c1
481 nmdc:mga06r32_34106_c1
482 nmdc:mga06r32_382032_c1
483 nmdc:mga06r32_40998_c1
484 nmdc:mga08y16_130845_c1
485 nmdc:mga08y16_2_c1
486 nmdc:mga08y16_44721_c1
487 nmdc:mga0n895_213783_c1
488 nmdc:mga0n895_51960_c1
489 nmdc:mga0n895_616344_c1
490 nmdc:mga0rr50_1995_c1
491 nmdc:mga0rr50_27252_c1
492 nmdc:mga08x19_2115_c1
493 nmdc:mga08x19_804_c1
494 nmdc:mga0a205_112498_c1
495 nmdc:mga0a205_86320_c1
496 Ga0495601_0250351
497 Ga0495619_0170692
498 Ga0501084_0023326
499 Ga0501084_0191088
500 Ga0590071_001913
501 Ga0590074_000406
502 Ga0590075_000173
503 Ga0590077_000197
504 2884219100

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02653

BPD_transp_2

Branched-chain amino acid transport system / permease component

48

313

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4g1u-assembly1.cif.gz_B x-ray structure of the bacterial heme transporter hmuuv from yersinia pestis 0.62 4 289
4dbl-assembly1.cif.gz_B crystal structure of e159q mutant of btucdf 0.5997 3 291
4g1u-assembly1.cif.gz_B x-ray structure of the bacterial heme transporter hmuuv from yersinia pestis 0.5993 4 289
4dbl-assembly1.cif.gz_B crystal structure of e159q mutant of btucdf 0.5633 3 291
4dbl-assembly2.cif.gz_F crystal structure of e159q mutant of btucdf 0.5401 3 289
ID Description Score Start End Superfamily
af_P32720_52_318_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9365 24 288 1.10.3470.10
af_P77315_52_317_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9307 24 288 1.10.3470.10
af_P39328_55_321_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9279 26 288 1.10.3470.10
af_P32720_52_318_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9264 24 288 1.10.3470.10
af_P77315_52_317_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.924 24 288 1.10.3470.10
ID Description Score Start End GO Terms
AF-A0A831X197-F1-model_v4 Autoinducer 2 import system permease protein LsrC 0.9894 4 297 GO:0005886
GO:0022857
AF-A0A538S5P7-F1-model_v4 ABC transporter permease 0.9852 3 297 GO:0005886
GO:0022857
AF-A0A7Y5S6I7-F1-model_v4 Autoinducer 2 import system permease protein LsrC 0.9721 3 300 GO:0005886
GO:0022857
AF-A0A7W0UZS3-F1-model_v4 Autoinducer 2 import system permease protein LsrC 0.9707 50 304 GO:0005886
GO:0022857
AF-A0A7T9GJ84-F1-model_v4 deleted 0.9705 2 302

Map