F362603

General Info

Members Datasets Scaffolds Average Seq Length
251 153 242 534

Family's Representative Sequence

Representative Sequence 3300042136|Ga0450900_004096|Ga0450900_004096_91_1548
Length 485
Sequence LIHGLDARDVSLAERVRADIQQISPSTEVRLHPMSLRNPWDFEEVYGALHDFTTAYNFDTEHEDYLVHITTGTHVAQICWFLLTEARYLPARLIQTSPAKRKNDNEPACGTHALIDLDLSRYDRIASRFASKRLEGLEFLKSGIATRNPAFNRTIEQIERVALRSKAPMLLIGPTGAGKSFLARRIYELKRNRHQMQGRFVEVNCATLRGDGAMSALFGHVKGAFTGAQSSRDGLLRAANGGMLFLDEIGELGADEQAMLLKAIEEKRFFPLGSDKEVESDFLIIAGTHRDLRSRVAEGAFREDLYARINLWTFDLPGLAGRREDIEPNIDFELERHAREQGERVRFNLEARRRYLAFASSPAAAWLGNFRELSASITRMATLADSGRIDEAQVDDEIARLRYAWGLAQPSATYLPGDGESMDLFDRLQLKAVIEVCQQADSLSDAGRQLFGVSRQAKVQPNDADRLRKYLGRFGLEWGEVVGAK

Samples

Sample ID Description Type Environment
1 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
2 2643221593 Lysobacter sp. Root690 Isolate Unclassified
3 2643221645 Massilia sp. Root351 Isolate Unclassified
4 2643221664 Massilia sp. Root418 Isolate Unclassified
5 2721755523 Delftia sp. HK171 Isolate Unclassified
6 2738541307 Variovorax sp. GV008 Isolate Unclassified
7 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
8 2818991436 Collimonas arenae 515 Isolate Unclassified
9 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
10 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
11 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
12 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
13 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
14 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
15 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
16 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
17 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
18 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
19 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
20 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
21 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
22 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
23 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
24 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
25 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
26 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
27 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
37 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
38 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
39 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
40 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
45 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
46 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
47 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
48 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
50 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
51 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
57 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
59 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
70 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
74 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
75 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
76 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
80 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
81 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
82 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
83 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
84 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
85 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
86 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
87 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
88 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
89 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
90 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
91 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
92 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
93 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
94 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
95 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
96 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
97 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
98 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
99 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
100 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
101 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
102 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
103 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
104 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
105 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
106 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
107 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
108 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
109 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
110 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
111 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
112 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
113 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
114 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
115 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
116 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
117 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
118 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
119 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
120 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
121 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
122 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
123 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
124 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
125 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
126 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
127 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
128 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
129 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
130 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
135 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
136 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
137 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
138 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
141 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
142 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
143 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
144 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
145 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
149 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
150 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
151 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
152 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
153 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.41
Metatranscriptomes 0
Isolates 3.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.73
Nodule 0
Rhizoplane 1.99
Rhizosphere 70.12
Stem 0
Stem Tuber 0
Unclassified 9.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000038 3300002737 Bacteria 179049
2 JGI25150J39212_1009147 3300002774 Bacteria 1904
3 JGI25159J45721_1000331 3300002987 Bacteria 21940
4 JGI25151J46595_10000187 3300003187 Bacteria 76949
5 JGI25151J46595_10003779 3300003187 Bacteria 8213
6 JGI25165J46597_1000045 3300003214 Bacteria 257539
7 JGI25160J50197_1000226 3300003354 Bacteria 44500
8 JGI25161J50226_1000037 3300003374 Bacteria 133331
9 Ga0055538_1000022 3300003751 Bacteria 257539
10 Ga0055539_1000028 3300003752 Bacteria 257539
11 Ga0055533_1000036 3300003756 Bacteria 257539
12 Ga0055525_1000071 3300003759 Bacteria 182624
13 Ga0055537_1000165 3300003773 Bacteria 49269
14 Ga0055541_1000037 3300003841 Bacteria 182624
15 Ga0058692_1007428 3300003856 Bacteria 2906
16 Ga0055543_1002137 3300004625 Bacteria 6837
17 Ga0065165_1000578 3300005262 Bacteria 54130
18 Ga0065165_1005009 3300005262 Bacteria 7762
19 Ga0065165_1006452 3300005262 Bacteria 6141
20 Ga0070687_100030398 3300005343 Bacteria 2640
21 Ga0070661_100012631 3300005344 Bacteria 5909
22 Ga0068853_100000004 3300005539 Bacteria 405732
23 Ga0068855_100009598 3300005563 Bacteria 11676
24 Ga0068864_100140677 3300005618 Bacteria 2176
25 Ga0105250_10000703 3300009092 Bacteria 20648
26 Ga0105240_10000056 3300009093 Bacteria 224822
27 Ga0105245_10064991 3300009098 Bacteria 3298
28 Ga0105243_10032367 3300009148 Bacteria 4040
29 Ga0163162_10154643 3300013306 Bacteria 2413
30 Ga0182008_10000360 3300014497 Bacteria 35424
31 Ga0182006_1018141 3300015261 Bacteria 2978
32 Ga0182007_10017388 3300015262 Bacteria 2627
33 Ga0163161_10004447 3300017792 Bacteria 9771
34 Ga0209784_100036 3300025224 Bacteria 263689
35 Ga0209566_100044 3300025225 Bacteria 263689
36 Ga0209674_100065 3300025226 Bacteria 263689
37 Ga0209563_100063 3300025230 Bacteria 263689
38 Ga0207427_101856 3300025231 Bacteria 6671
39 Ga0209437_100082 3300025233 Bacteria 263689
40 Ga0207425_1000151 3300025245 Bacteria 59370
41 Ga0207425_1001935 3300025245 Bacteria 7798
42 Ga0209026_1006263 3300025250 Bacteria 2958
43 Ga0209677_100038 3300025253 Bacteria 263689
44 Ga0209129_1000038 3300025258 Bacteria 322778
45 Ga0209233_1000109 3300025261 Bacteria 263689
46 Ga0209565_1000102 3300025263 Bacteria 127545
47 Ga0209673_1000189 3300025273 Bacteria 123470
48 Ga0209130_1000141 3300025284 Bacteria 115378
49 Ga0209025_1000006 3300025294 Bacteria 1153444
50 Ga0209025_1005807 3300025294 Bacteria 9893
51 Ga0209564_1000129 3300025295 Bacteria 195163
52 Ga0209564_1000415 3300025295 Bacteria 75119
53 Ga0209564_1008276 3300025295 Bacteria 5163
54 Ga0209758_1000197 3300025297 Bacteria 133706
55 Ga0209758_1004434 3300025297 Bacteria 11686
56 Ga0209256_1000003 3300025299 Bacteria 1661127
57 Ga0207426_1000145 3300025302 Bacteria 191065
58 Ga0207696_1000741 3300025711 Bacteria 21824
59 Ga0207654_10009051 3300025911 Bacteria 5053
60 Ga0207695_10000103 3300025913 Bacteria 257354
61 Ga0207662_10043837 3300025918 Bacteria 2640
62 Ga0207649_10066054 3300025920 Bacteria 2292
63 Ga0207709_10000186 3300025935 Bacteria 83013
64 Ga0207709_10022034 3300025935 Bacteria 3611
65 Ga0207709_10032377 3300025935 Bacteria 3060
66 Ga0207679_10085877 3300025945 Bacteria 2418
67 Ga0207667_10003511 3300025949 Bacteria 19383
68 Ga0207639_10000002 3300026041 Bacteria 903066
69 Ga0207676_10171193 3300026095 Bacteria 1892
70 Ga0209371_1000010 3300027312 Bacteria 922021
71 Ga0268256_1000051 3300030500 Bacteria 283626
72 Ga0307408_100034948 3300031548 Bacteria 3524
73 Ga0307408_100110589 3300031548 Bacteria 2110
74 Ga0307508_10047281 3300031616 Bacteria 3839
75 Ga0307406_10006526 3300031901 Bacteria 6447
76 Ga0307406_10007656 3300031901 Bacteria 5998
77 Ga0373939_0000089 3300035114 Bacteria 29155
78 Ga0373931_0001140 3300035691 Bacteria 11290
79 Ga0395899_0005748 3300037312 Bacteria 9627
80 Ga0395900_0000094 3300037418 Bacteria 165903
81 Ga0395898_0055130 3300037466 Bacteria 3877
82 Ga0436361_1134210 3300039447 Bacteria 5084
83 Ga0439438_000842 3300041405 Bacteria 13696
84 Ga0439449_0011445 3300042007 Bacteria 3338
85 Ga0450900_004096 3300042136 Bacteria 1658
86 Ga0466972_0000132 3300044658 Bacteria 61824
87 Ga0466972_0000314 3300044658 Bacteria 27904
88 Ga0466972_0017953 3300044658 Bacteria 3538
89 Ga0466965_0005332 3300044683 Bacteria 5786
90 Ga0466965_0078727 3300044683 Bacteria 1665
91 Ga0466966_0000999 3300044684 Bacteria 18041
92 Ga0466966_0005816 3300044684 Bacteria 8130
93 Ga0466966_0011184 3300044684 Bacteria 5953
94 Ga0466964_0000189 3300044706 Bacteria 16990
95 Ga0466968_0000291 3300044735 Bacteria 15994
96 Ga0466968_0006731 3300044735 Bacteria 4343
97 Ga0466958_0001351 3300045836 Bacteria 11586
98 Ga0495617_000017 3300046452 Bacteria 253066
99 Ga0495627_000063 3300046453 Bacteria 132682
100 Ga0495627_019136 3300046453 Bacteria 2301
101 Ga0495590_0002981 3300046457 Bacteria 6941
102 Ga0495590_0003275 3300046457 Bacteria 6622
103 Ga0495638_0006417 3300046460 Bacteria 8561
104 Ga0495650_0000255 3300046471 Bacteria 103396
105 Ga0495605_0000136 3300046474 Bacteria 94494
106 Ga0495605_0005762 3300046474 Bacteria 7174
107 Ga0495605_0008992 3300046474 Bacteria 5624
108 Ga0495605_0015334 3300046474 Bacteria 4171
109 Ga0495584_0018638 3300046491 Bacteria 3528
110 Ga0495596_0000221 3300046500 Bacteria 39400
111 Ga0495596_0004065 3300046500 Bacteria 7202
112 Ga0495596_0013001 3300046500 Bacteria 3545
113 Ga0495596_0015763 3300046500 Bacteria 3154
114 Ga0495607_0001313 3300046501 Bacteria 22171
115 Ga0495607_0022268 3300046501 Bacteria 3981
116 Ga0495607_0027491 3300046501 Bacteria 3516
117 Ga0495583_0001103 3300046506 Bacteria 29860
118 Ga0495583_0001202 3300046506 Bacteria 27775
119 Ga0495583_0003869 3300046506 Bacteria 11090
120 Ga0495583_0009956 3300046506 Bacteria 5611
121 Ga0495606_0025127 3300046507 Bacteria 4274
122 Ga0495606_0060431 3300046507 Bacteria 2427
123 Ga0495610_0002798 3300046512 Bacteria 14269
124 Ga0495610_0048292 3300046512 Bacteria 2090
125 Ga0495616_0030809 3300046513 Bacteria 2814
126 Ga0495631_0001662 3300046518 Bacteria 13225
127 Ga0495631_0004508 3300046518 Bacteria 7401
128 Ga0495631_0012071 3300046518 Bacteria 4232
129 Ga0495632_0000510 3300046519 Bacteria 36555
130 Ga0495632_0000666 3300046519 Bacteria 31428
131 Ga0495632_0020138 3300046519 Bacteria 3619
132 Ga0495637_0004079 3300046520 Bacteria 7623
133 Ga0495637_0016508 3300046520 Bacteria 3450
134 Ga0495643_0000912 3300046522 Bacteria 31145
135 Ga0495643_0001978 3300046522 Bacteria 17199
136 Ga0495643_0012163 3300046522 Bacteria 5201
137 Ga0495643_0016488 3300046522 Bacteria 4339
138 Ga0495644_0000641 3300046523 Bacteria 14617
139 Ga0495644_0012612 3300046523 Bacteria 3250
140 Ga0495648_0003445 3300046524 Bacteria 13913
141 Ga0495648_0004263 3300046524 Bacteria 12266
142 Ga0495648_0006052 3300046524 Bacteria 9925
143 Ga0495663_0005397 3300046525 Bacteria 3546
144 Ga0495663_0012723 3300046525 Bacteria 2348
145 Ga0495642_0000132 3300046528 Bacteria 43042
146 Ga0495642_0003977 3300046528 Bacteria 5778
147 Ga0495642_0011030 3300046528 Bacteria 3466
148 Ga0495652_0007208 3300046529 Bacteria 10264
149 Ga0495654_0002186 3300046530 Bacteria 12696
150 Ga0495654_0008664 3300046530 Bacteria 5606
151 Ga0495609_0010030 3300046538 Bacteria 4560
152 Ga0495609_0014347 3300046538 Bacteria 3727
153 Ga0495597_0000475 3300046542 Bacteria 34029
154 Ga0495597_0002163 3300046542 Bacteria 12901
155 Ga0495597_0002188 3300046542 Bacteria 12840
156 Ga0495597_0017027 3300046542 Bacteria 3426
157 Ga0495597_0021713 3300046542 Bacteria 2984
158 Ga0495597_0027818 3300046542 Bacteria 2590
159 Ga0495656_0003050 3300046615 Bacteria 5634
160 Ga0495656_0005060 3300046615 Bacteria 4544
161 Ga0495668_0000420 3300046616 Bacteria 55257
162 Ga0495668_0000933 3300046616 Bacteria 32617
163 Ga0495668_0003671 3300046616 Bacteria 11335
164 Ga0495668_0004040 3300046616 Bacteria 10672
165 Ga0495668_0008669 3300046616 Bacteria 6323
166 Ga0495668_0016854 3300046616 Bacteria 4244
167 Ga0495668_0049296 3300046616 Bacteria 2335
168 Ga0495611_0000865 3300046648 Bacteria 16604
169 Ga0495611_0032569 3300046648 Bacteria 2297
170 Ga0495625_0000394 3300046660 Bacteria 66655
171 Ga0495625_0006702 3300046660 Bacteria 10212
172 Ga0495625_0067306 3300046660 Bacteria 2521
173 Ga0495661_0003898 3300046665 Bacteria 10898
174 Ga0495661_0007728 3300046665 Bacteria 7489
175 Ga0495661_0014076 3300046665 Bacteria 5362
176 Ga0495588_0006890 3300046674 Bacteria 5148
177 Ga0495670_0034950 3300046691 Bacteria 2504
178 Ga0495671_0000231 3300046692 Bacteria 48134
179 Ga0495671_0002585 3300046692 Bacteria 11392
180 Ga0495589_0004504 3300046794 Bacteria 7401
181 Ga0495589_0011019 3300046794 Bacteria 4693
182 Ga0495589_0016341 3300046794 Bacteria 3815
183 Ga0495589_0028346 3300046794 Bacteria 2826
184 Ga0495660_0002650 3300046810 Bacteria 11338
185 Ga0495660_0002801 3300046810 Bacteria 10983
186 Ga0495672_0000069 3300047320 Bacteria 189627
187 Ga0495672_0002616 3300047320 Bacteria 16300
188 Ga0495672_0004633 3300047320 Bacteria 11162
189 Ga0495683_0002274 3300047323 Bacteria 11720
190 Ga0495683_0028883 3300047323 Bacteria 2834
191 Ga0495683_0066389 3300047323 Bacteria 1778
192 Ga0495687_001414 3300047443 Bacteria 22102
193 Ga0495677_0000551 3300047445 Bacteria 15521
194 Ga0495677_0001902 3300047445 Bacteria 8341
195 Ga0495677_0012104 3300047445 Bacteria 3148
196 Ga0495679_000840 3300047446 Bacteria 19523
197 Ga0495685_004122 3300047447 Bacteria 4675
198 Ga0495681_0006192 3300047470 Bacteria 7891
199 Ga0495681_0020587 3300047470 Bacteria 3577
200 Ga0495686_0005557 3300047472 Bacteria 9914
201 Ga0495686_0015800 3300047472 Bacteria 5137
202 Ga0495626_0000043 3300048091 Bacteria 168109
203 Ga0495626_0004776 3300048091 Bacteria 8181
204 Ga0495626_0009297 3300048091 Bacteria 5316
205 Ga0495626_0015972 3300048091 Bacteria 3827
206 Ga0495626_0037310 3300048091 Bacteria 2310
207 Ga0496104_0035683 3300048907 Bacteria 4644
208 Ga0496106_0093061 3300048909 Bacteria 2329
209 Ga0496110_0000332 3300048913 Bacteria 31569
210 Ga0496110_0144591 3300048913 Bacteria 2150
211 Ga0496111_0013466 3300048914 Bacteria 5567
212 Ga0496117_0002186 3300048920 Bacteria 25494
213 Ga0496118_0002393 3300048921 Bacteria 25331
214 Ga0496118_0102016 3300048921 Bacteria 1935
215 Ga0496121_0011662 3300048924 Bacteria 9714
216 Ga0496122_0009140 3300048925 Bacteria 10501
217 Ga0496122_0016238 3300048925 Bacteria 7066
218 Ga0496123_0000073 3300048926 Bacteria 198307
219 Ga0496123_0000983 3300048926 Bacteria 44022
220 Ga0496123_0004855 3300048926 Bacteria 13844
221 Ga0496124_0000486 3300048927 Bacteria 68189
222 Ga0496124_0008315 3300048927 Bacteria 10860
223 Ga0496124_0009622 3300048927 Bacteria 9906
224 Ga0496124_0011639 3300048927 Bacteria 8779
225 Ga0496124_0029580 3300048927 Bacteria 4878
226 Ga0496125_0005755 3300048928 Bacteria 13628
227 Ga0495678_000051 3300049459 Bacteria 159383
228 Ga0495678_000082 3300049459 Bacteria 118148
229 Ga0495678_000367 3300049459 Bacteria 46226
230 Ga0495678_000696 3300049459 Bacteria 30577
231 Ga0495678_007630 3300049459 Bacteria 5582
232 Ga0495682_0000458 3300049460 Bacteria 28126
233 Ga0495682_0006327 3300049460 Bacteria 4798
234 Ga0495682_0006482 3300049460 Bacteria 4727
235 Ga0501080_0027145 3300049742 Bacteria 5325
236 Ga0501044_0235939 3300049823 Bacteria 1775
237 nmdc:mga0yw44_49165_c1 3300050492 Bacteria 2544
238 Ga0500635_0000041 3300053080 Bacteria 90865
239 Ga0500595_021146 3300053119 Bacteria 2328
240 Ga0500616_0002473 3300053153 Bacteria 15337
241 Ga0500619_000266 3300053154 Bacteria 10867
242 Ga0500622_0010787 3300053156 Bacteria 4997

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049823 Ga0501044_0235939 Ga0501044_0235939_12_1418 468
2 3300042136 Ga0450900_004096 Ga0450900_004096_91_1548 477
3 3300053153 Ga0500616_0002473 Ga0500616_0002473_2050_3534 493
4 3300047323 Ga0495683_0066389 Ga0495683_0066389_50_1540 496
5 3300046528 Ga0495642_0011030 Ga0495642_0011030_1929_3437 502
6 3300046500 Ga0495596_0000221 Ga0495596_0000221_5216_6817 507
7 3300048927 Ga0496124_0000486 Ga0496124_0000486_6271_7872 507
8 3300005262 Ga0065165_1005009 Ga0065165_10050096 508
9 3300049459 Ga0495678_007630 Ga0495678_007630_2250_3851 515
10 3300002987 JGI25159J45721_1000331 JGI25159J45721_10003314 518
11 3300003354 JGI25160J50197_1000226 JGI25160J50197_10002264 518
12 3300003374 JGI25161J50226_1000037 JGI25161J50226_100003737 518
13 3300004625 Ga0055543_1002137 Ga0055543_10021376 518
14 3300005262 Ga0065165_1006452 Ga0065165_10064523 518
15 3300025284 Ga0209130_1000141 Ga0209130_100014193 518
16 3300025302 Ga0207426_1000145 Ga0207426_100014590 518
17 3300003187 JGI25151J46595_10003779 JGI25151J46595_100037792 519
18 3300025294 Ga0209025_1005807 Ga0209025_10058075 519
19 3300025295 Ga0209564_1008276 Ga0209564_10082763 519
20 3300041405 Ga0439438_000842 Ga0439438_000842_11411_13009 523
21 3300003856 Ga0058692_1007428 Ga0058692_10074281 524
22 3300027312 Ga0209371_1000010 Ga0209371_100001047 524
23 3300030500 Ga0268256_1000051 Ga0268256_1000051139 524
24 iso_pu_bacteria 2643221593 2643973243 525
25 iso_pu_bacteria 2511231002 2511245864 527
26 3300053119 Ga0500595_021146 Ga0500595_021146_398_1990 528
27 iso_pu_bacteria 2643221645 2644252510 528
28 3300003187 JGI25151J46595_10000187 JGI25151J46595_1000018734 529
29 3300025245 Ga0207425_1001935 Ga0207425_10019357 529
30 3300025294 Ga0209025_1000006 Ga0209025_1000006520 529
31 3300025297 Ga0209758_1004434 Ga0209758_10044343 529
32 3300031548 Ga0307408_100034948 Ga0307408_1000349481 529
33 3300031901 Ga0307406_10006526 Ga0307406_100065263 529
34 3300046616 Ga0495668_0008669 Ga0495668_0008669_1832_3427 529
35 iso_pu_bacteria 2643221664 2644356094 529
36 3300046512 Ga0495610_0002798 Ga0495610_0002798_9093_10685 530
37 3300053156 Ga0500622_0010787 Ga0500622_0010787_2676_4268 530
38 iso_pu_bacteria 2738541307 2738880700 530
39 iso_pu_bacteria 2808606418 2809146068 530
40 3300003773 Ga0055537_1000165 Ga0055537_100016526 531
41 3300009148 Ga0105243_10032367 Ga0105243_100323672 531
42 3300025263 Ga0209565_1000102 Ga0209565_100010283 531
43 3300025273 Ga0209673_1000189 Ga0209673_100018931 531
44 3300025295 Ga0209564_1000415 Ga0209564_100041522 531
45 3300025299 Ga0209256_1000003 Ga0209256_1000003930 531
46 3300025935 Ga0207709_10032377 Ga0207709_100323772 531
47 3300031616 Ga0307508_10047281 Ga0307508_100472815 531
48 3300031901 Ga0307406_10007656 Ga0307406_100076562 531
49 3300046471 Ga0495650_0000255 Ga0495650_0000255_92635_94230 531
50 3300046660 Ga0495625_0000394 Ga0495625_0000394_47373_48968 531
51 iso_pu_bacteria 2721755523 2722886496 531
52 iso_pu_bacteria 2939622612 2939626581 531
53 3300048927 Ga0496124_0009622 Ga0496124_0009622_2295_3899 532
54 3300005563 Ga0068855_100009598 Ga0068855_10000959810 533
55 3300009093 Ga0105240_10000056 Ga0105240_10000056163 533
56 3300025913 Ga0207695_10000103 Ga0207695_10000103165 533
57 3300025949 Ga0207667_10003511 Ga0207667_1000351112 533
58 3300044658 Ga0466972_0000314 Ga0466972_0000314_5625_7229 533
59 3300044683 Ga0466965_0078727 Ga0466965_0078727_23_1627 533
60 3300046453 Ga0495627_019136 Ga0495627_019136_399_2000 533
61 3300046457 Ga0495590_0003275 Ga0495590_0003275_2280_3881 533
62 3300046491 Ga0495584_0018638 Ga0495584_0018638_1650_3251 533
63 3300046522 Ga0495643_0001978 Ga0495643_0001978_8950_10554 533
64 3300046523 Ga0495644_0012612 Ga0495644_0012612_1314_2915 533
65 3300046525 Ga0495663_0005397 Ga0495663_0005397_395_1996 533
66 3300046528 Ga0495642_0003977 Ga0495642_0003977_236_1837 533
67 3300046542 Ga0495597_0027818 Ga0495597_0027818_815_2416 533
68 3300046615 Ga0495656_0003050 Ga0495656_0003050_1601_3202 533
69 3300047320 Ga0495672_0000069 Ga0495672_0000069_181749_183353 533
70 3300047445 Ga0495677_0001902 Ga0495677_0001902_3046_4647 533
71 3300047470 Ga0495681_0020587 Ga0495681_0020587_316_1917 533
72 3300047472 Ga0495686_0005557 Ga0495686_0005557_7778_9382 533
73 3300048925 Ga0496122_0016238 Ga0496122_0016238_1850_3451 533
74 3300048926 Ga0496123_0000073 Ga0496123_0000073_5983_7590 533
75 3300048926 Ga0496123_0000983 Ga0496123_0000983_11125_12726 533
76 3300005618 Ga0068864_100140677 Ga0068864_1001406772 534
77 3300017792 Ga0163161_10004447 Ga0163161_100044471 534
78 3300026095 Ga0207676_10171193 Ga0207676_101711931 534
79 3300039447 Ga0436361_1134210 Ga0436361_1134210_1066_2670 534
80 3300044684 Ga0466966_0000999 Ga0466966_0000999_12332_13936 534
81 3300046512 Ga0495610_0048292 Ga0495610_0048292_146_1750 534
82 3300046522 Ga0495643_0016488 Ga0495643_0016488_698_2302 534
83 3300046542 Ga0495597_0017027 Ga0495597_0017027_61_1665 534
84 3300048909 Ga0496106_0093061 Ga0496106_0093061_643_2247 534
85 3300048913 Ga0496110_0144591 Ga0496110_0144591_30_1634 534
86 3300048914 Ga0496111_0013466 Ga0496111_0013466_2922_4526 534
87 3300049460 Ga0495682_0006327 Ga0495682_0006327_1608_3212 534
88 3300053080 Ga0500635_0000041 Ga0500635_0000041_36465_38072 534
89 3300005262 Ga0065165_1000578 Ga0065165_100057832 535
90 3300005344 Ga0070661_100012631 Ga0070661_1000126314 535
91 3300009092 Ga0105250_10000703 Ga0105250_100007037 535
92 3300009098 Ga0105245_10064991 Ga0105245_100649912 535
93 3300025250 Ga0209026_1006263 Ga0209026_10062631 535
94 3300025711 Ga0207696_1000741 Ga0207696_10007417 535
95 3300025911 Ga0207654_10009051 Ga0207654_100090514 535
96 3300025920 Ga0207649_10066054 Ga0207649_100660541 535
97 3300025935 Ga0207709_10000186 Ga0207709_1000018616 535
98 3300025935 Ga0207709_10022034 Ga0207709_100220342 535
99 3300025945 Ga0207679_10085877 Ga0207679_100858773 535
100 3300031548 Ga0307408_100110589 Ga0307408_1001105892 535
101 3300035114 Ga0373939_0000089 Ga0373939_0000089_6846_8453 535
102 3300035691 Ga0373931_0001140 Ga0373931_0001140_8974_10581 535
103 3300037312 Ga0395899_0005748 Ga0395899_0005748_3508_5121 535
104 3300037418 Ga0395900_0000094 Ga0395900_0000094_20076_21689 535
105 3300037466 Ga0395898_0055130 Ga0395898_0055130_1381_2994 535
106 3300042007 Ga0439449_0011445 Ga0439449_0011445_1508_3115 535
107 3300044658 Ga0466972_0017953 Ga0466972_0017953_1617_3230 535
108 3300044683 Ga0466965_0005332 Ga0466965_0005332_3907_5520 535
109 3300044684 Ga0466966_0011184 Ga0466966_0011184_3205_4818 535
110 3300044706 Ga0466964_0000189 Ga0466964_0000189_12078_13685 535
111 3300044735 Ga0466968_0000291 Ga0466968_0000291_14145_15758 535
112 3300046452 Ga0495617_000017 Ga0495617_000017_91263_92870 535
113 3300046453 Ga0495627_000063 Ga0495627_000063_85094_86701 535
114 3300046457 Ga0495590_0002981 Ga0495590_0002981_2150_3757 535
115 3300046474 Ga0495605_0000136 Ga0495605_0000136_86121_87728 535
116 3300046474 Ga0495605_0005762 Ga0495605_0005762_216_1823 535
117 3300046474 Ga0495605_0008992 Ga0495605_0008992_3808_5418 535
118 3300046500 Ga0495596_0004065 Ga0495596_0004065_2672_4282 535
119 3300046500 Ga0495596_0013001 Ga0495596_0013001_1776_3383 535
120 3300046500 Ga0495596_0015763 Ga0495596_0015763_65_1672 535
121 3300046501 Ga0495607_0001313 Ga0495607_0001313_6887_8497 535
122 3300046501 Ga0495607_0022268 Ga0495607_0022268_1524_3134 535
123 3300046501 Ga0495607_0027491 Ga0495607_0027491_1646_3253 535
124 3300046506 Ga0495583_0001103 Ga0495583_0001103_15866_17473 535
125 3300046506 Ga0495583_0001202 Ga0495583_0001202_9526_11136 535
126 3300046506 Ga0495583_0003869 Ga0495583_0003869_7422_9029 535
127 3300046506 Ga0495583_0009956 Ga0495583_0009956_1794_3401 535
128 3300046507 Ga0495606_0025127 Ga0495606_0025127_2511_4118 535
129 3300046507 Ga0495606_0060431 Ga0495606_0060431_152_1762 535
130 3300046513 Ga0495616_0030809 Ga0495616_0030809_25_1638 535
131 3300046518 Ga0495631_0001662 Ga0495631_0001662_3362_4969 535
132 3300046518 Ga0495631_0004508 Ga0495631_0004508_654_2261 535
133 3300046518 Ga0495631_0012071 Ga0495631_0012071_827_2434 535
134 3300046519 Ga0495632_0000510 Ga0495632_0000510_8526_10133 535
135 3300046519 Ga0495632_0000666 Ga0495632_0000666_7825_9435 535
136 3300046519 Ga0495632_0020138 Ga0495632_0020138_630_2240 535
137 3300046520 Ga0495637_0004079 Ga0495637_0004079_5922_7529 535
138 3300046520 Ga0495637_0016508 Ga0495637_0016508_827_2434 535
139 3300046522 Ga0495643_0000912 Ga0495643_0000912_22028_23638 535
140 3300046522 Ga0495643_0012163 Ga0495643_0012163_3531_5138 535
141 3300046523 Ga0495644_0000641 Ga0495644_0000641_417_2024 535
142 3300046524 Ga0495648_0003445 Ga0495648_0003445_5897_7504 535
143 3300046524 Ga0495648_0004263 Ga0495648_0004263_4342_5949 535
144 3300046524 Ga0495648_0006052 Ga0495648_0006052_5388_6995 535
145 3300046525 Ga0495663_0012723 Ga0495663_0012723_719_2326 535
146 3300046528 Ga0495642_0000132 Ga0495642_0000132_25228_26835 535
147 3300046530 Ga0495654_0002186 Ga0495654_0002186_5920_7527 535
148 3300046530 Ga0495654_0008664 Ga0495654_0008664_469_2076 535
149 3300046538 Ga0495609_0010030 Ga0495609_0010030_1632_3239 535
150 3300046538 Ga0495609_0014347 Ga0495609_0014347_1523_3133 535
151 3300046542 Ga0495597_0000475 Ga0495597_0000475_22085_23692 535
152 3300046542 Ga0495597_0002188 Ga0495597_0002188_722_2329 535
153 3300046542 Ga0495597_0021713 Ga0495597_0021713_1028_2635 535
154 3300046615 Ga0495656_0005060 Ga0495656_0005060_243_1850 535
155 3300046616 Ga0495668_0000420 Ga0495668_0000420_49919_51526 535
156 3300046616 Ga0495668_0000933 Ga0495668_0000933_7949_9556 535
157 3300046616 Ga0495668_0003671 Ga0495668_0003671_5630_7237 535
158 3300046616 Ga0495668_0004040 Ga0495668_0004040_4285_5892 535
159 3300046616 Ga0495668_0016854 Ga0495668_0016854_1011_2618 535
160 3300046616 Ga0495668_0049296 Ga0495668_0049296_164_1771 535
161 3300046648 Ga0495611_0032569 Ga0495611_0032569_481_2091 535
162 3300046660 Ga0495625_0006702 Ga0495625_0006702_3552_5159 535
163 3300046660 Ga0495625_0067306 Ga0495625_0067306_478_2085 535
164 3300046665 Ga0495661_0003898 Ga0495661_0003898_5292_6902 535
165 3300046665 Ga0495661_0007728 Ga0495661_0007728_4698_6305 535
166 3300046665 Ga0495661_0014076 Ga0495661_0014076_2203_3813 535
167 3300046674 Ga0495588_0006890 Ga0495588_0006890_286_1893 535
168 3300046691 Ga0495670_0034950 Ga0495670_0034950_283_1893 535
169 3300046692 Ga0495671_0000231 Ga0495671_0000231_41662_43269 535
170 3300046692 Ga0495671_0002585 Ga0495671_0002585_5376_6983 535
171 3300046794 Ga0495589_0004504 Ga0495589_0004504_246_1853 535
172 3300046794 Ga0495589_0011019 Ga0495589_0011019_866_2476 535
173 3300046794 Ga0495589_0016341 Ga0495589_0016341_212_1819 535
174 3300046794 Ga0495589_0028346 Ga0495589_0028346_553_2160 535
175 3300046810 Ga0495660_0002801 Ga0495660_0002801_4857_6464 535
176 3300047320 Ga0495672_0004633 Ga0495672_0004633_4739_6346 535
177 3300047323 Ga0495683_0002274 Ga0495683_0002274_726_2336 535
178 3300047323 Ga0495683_0028883 Ga0495683_0028883_721_2328 535
179 3300047443 Ga0495687_001414 Ga0495687_001414_6220_7827 535
180 3300047445 Ga0495677_0000551 Ga0495677_0000551_5316_7004 535
181 3300047445 Ga0495677_0012104 Ga0495677_0012104_803_2413 535
182 3300047446 Ga0495679_000840 Ga0495679_000840_8434_10041 535
183 3300047447 Ga0495685_004122 Ga0495685_004122_1724_3331 535
184 3300047470 Ga0495681_0006192 Ga0495681_0006192_5162_6769 535
185 3300047472 Ga0495686_0015800 Ga0495686_0015800_3418_5025 535
186 3300048091 Ga0495626_0000043 Ga0495626_0000043_42415_44034 535
187 3300048091 Ga0495626_0004776 Ga0495626_0004776_246_1853 535
188 3300048091 Ga0495626_0009297 Ga0495626_0009297_61_1668 535
189 3300048091 Ga0495626_0015972 Ga0495626_0015972_1133_2743 535
190 3300048091 Ga0495626_0037310 Ga0495626_0037310_33_1640 535
191 3300048907 Ga0496104_0035683 Ga0496104_0035683_2812_4425 535
192 3300048913 Ga0496110_0000332 Ga0496110_0000332_7876_9495 535
193 3300048927 Ga0496124_0029580 Ga0496124_0029580_1700_3307 535
194 3300049459 Ga0495678_000051 Ga0495678_000051_151372_152979 535
195 3300049459 Ga0495678_000082 Ga0495678_000082_109577_111184 535
196 3300049459 Ga0495678_000367 Ga0495678_000367_21872_23479 535
197 3300049459 Ga0495678_000696 Ga0495678_000696_22631_24238 535
198 3300049460 Ga0495682_0000458 Ga0495682_0000458_21946_23553 535
199 3300049460 Ga0495682_0006482 Ga0495682_0006482_1325_2932 535
200 3300005539 Ga0068853_100000004 Ga0068853_100000004211 536
201 3300013306 Ga0163162_10154643 Ga0163162_101546432 536
202 3300014497 Ga0182008_10000360 Ga0182008_100003607 536
203 3300026041 Ga0207639_10000002 Ga0207639_1000000219 536
204 3300046460 Ga0495638_0006417 Ga0495638_0006417_6426_8042 536
205 3300046810 Ga0495660_0002650 Ga0495660_0002650_1827_3437 536
206 3300048920 Ga0496117_0002186 Ga0496117_0002186_15279_16895 536
207 3300048921 Ga0496118_0002393 Ga0496118_0002393_15354_16970 536
208 3300048921 Ga0496118_0102016 Ga0496118_0102016_265_1881 536
209 3300048924 Ga0496121_0011662 Ga0496121_0011662_6214_7830 536
210 3300048925 Ga0496122_0009140 Ga0496122_0009140_2894_4510 536
211 3300048926 Ga0496123_0004855 Ga0496123_0004855_7897_9513 536
212 3300048927 Ga0496124_0008315 Ga0496124_0008315_1294_2910 536
213 3300048927 Ga0496124_0011639 Ga0496124_0011639_4558_6174 536
214 3300048928 Ga0496125_0005755 Ga0496125_0005755_7921_9537 536
215 3300049742 Ga0501080_0027145 Ga0501080_0027145_1867_3480 536
216 3300050492 nmdc:mga0yw44_49165_c1 nmdc:mga0yw44_49165_c1_346_1962 536
217 3300005343 Ga0070687_100030398 Ga0070687_1000303982 537
218 3300025918 Ga0207662_10043837 Ga0207662_100438372 537
219 3300044658 Ga0466972_0000132 Ga0466972_0000132_31111_32724 537
220 3300044684 Ga0466966_0005816 Ga0466966_0005816_3270_4883 537
221 3300044735 Ga0466968_0006731 Ga0466968_0006731_1310_2923 537
222 3300045836 Ga0466958_0001351 Ga0466958_0001351_6422_8035 537
223 3300046542 Ga0495597_0002163 Ga0495597_0002163_10631_12328 537
224 iso_pu_bacteria 2818991436 2819544181 539
225 3300002774 JGI25150J39212_1009147 JGI25150J39212_10091471 541
226 3300025245 Ga0207425_1000151 Ga0207425_100015125 541
227 3300025258 Ga0209129_1000038 Ga0209129_1000038111 541
228 3300025295 Ga0209564_1000129 Ga0209564_100012976 541
229 3300025297 Ga0209758_1000197 Ga0209758_100019776 541
230 3300046474 Ga0495605_0015334 Ga0495605_0015334_306_1934 542
231 3300046648 Ga0495611_0000865 Ga0495611_0000865_7391_9019 542
232 3300002737 JGI25162J39368_1000038 JGI25162J39368_100003824 543
233 3300003214 JGI25165J46597_1000045 JGI25165J46597_100004524 543
234 3300003751 Ga0055538_1000022 Ga0055538_100002224 543
235 3300003752 Ga0055539_1000028 Ga0055539_100002824 543
236 3300003756 Ga0055533_1000036 Ga0055533_100003624 543
237 3300003759 Ga0055525_1000071 Ga0055525_1000071141 543
238 3300003841 Ga0055541_1000037 Ga0055541_1000037141 543
239 3300015261 Ga0182006_1018141 Ga0182006_10181412 543
240 3300015262 Ga0182007_10017388 Ga0182007_100173882 543
241 3300025224 Ga0209784_100036 Ga0209784_100036210 543
242 3300025225 Ga0209566_100044 Ga0209566_100044210 543
243 3300025226 Ga0209674_100065 Ga0209674_100065210 543
244 3300025230 Ga0209563_100063 Ga0209563_100063210 543
245 3300025231 Ga0207427_101856 Ga0207427_1018563 543
246 3300025233 Ga0209437_100082 Ga0209437_100082210 543
247 3300025253 Ga0209677_100038 Ga0209677_100038210 543
248 3300025261 Ga0209233_1000109 Ga0209233_1000109210 543
249 3300046529 Ga0495652_0007208 Ga0495652_0007208_8028_9659 543
250 3300047320 Ga0495672_0002616 Ga0495672_0002616_11094_12743 543
251 3300053154 Ga0500619_000266 Ga0500619_000266_900_2531 543

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00158

Sigma54_activat

Sigma-54 interaction domain

144

315

0.94

PF06956

RtcR

Regulator of RNA terminal phosphate cyclase

1

143

0.94

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

169

308

0.86

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

143

319

0.84

PF07728

AAA_5

AAA domain (dynein-related subfamily)

168

303

0.82

PF01078

Mg_chelatase

Magnesium chelatase, subunit ChlI

152

279

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bs1-assembly1.cif.gz_B-1 mub is an aaaplus atpase that forms helical filaments to control target selection for dna transposition 0.9286 196 359
1ojl-assembly2.cif.gz_F-3 crystal structure of a sigma54-activator suggests the mechanism for the conformational switch necessary for sigma54 binding 0.9278 190 435
6jdi-assembly1.cif.gz_A central domain of fleq h287n mutant in complex with atpgs and mg 0.8965 190 440
6jdl-assembly1.cif.gz_A central domain of fleq h287a mutant in complex with atpgs and mg 0.8929 190 440
6luf-assembly4.cif.gz_D trans-acting mutant y290a of the central aaa+ domain of the flagellar regulatory protein flrc 0.8921 191 436
ID Description Score Start End Superfamily
af_P38035_362_443_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9934 363 442 1.10.8.60
af_P38035_362_443_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9577 363 442 1.10.8.60
5m7nA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.935 190 357 3.40.50.300
1ojlB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9345 195 361 3.40.50.300
af_P38035_172_361_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9197 173 361 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2V8ULU9-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.9812 243 367 GO:0005524
GO:0006355
AF-A0A485BGG0-F1-model_v4 Nitrogen regulation protein NR(I) 0.9715 256 340 GO:0000160
GO:0005524
GO:0006355
AF-A0A349BUA1-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.9469 190 348 GO:0005524
GO:0006355
AF-F3CKM8-F1-model_v4 Sigma-54 dependent transcriptional regulator 0.9468 190 328 GO:0000160
GO:0005524
GO:0006355
GO:0016887
AF-A0A3S1WR45-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.9424 198 366 GO:0003677
GO:0005524
GO:0006355
GO:0016887

Feature Viewer

pLDDT pTM Quality
83.97 0.5 Medium
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Predicted Structure (AlphaFold2)

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