F362411

General Info

Members Datasets Scaffolds Average Seq Length
251 185 502 414

Family's Representative Sequence

Representative Sequence 3300013296|Ga0157374_10004786|Ga0157374_100047867
Length 450
Sequence LEVVACQKCQVLQKQYEKLKRQVMTKSKTILAGTIITGALAVNSNPSSGQGTSFIEDTTSEAIRPFSVHIPQAQLDDLRRRIIATNWPDREIVTDQSQGVQLSTIQALAHYWATDYDWRKIEAKLNSLPQFITTIDGVDIHFIQVKSRHKNALPMIITHGWPGSIIEQLKIIGPLTDPTAYGGNADDAFDVVIPSLPGYGFSGKPTTTGWDPVRIARAWIVLMKRLGYTRFVAQGGDWGNAVTEQMALLAAPELIGIHTNMPATVPPNIDAAAFSGAPAPSGLTDDEKHAYDQLAYFYKHGLGYANEMANRPQTLYGITDSPIGLAAWMLDHDAQSLALITRVFEGKSEGLTRDDILDNITLYWLTNTAVSSARLYWESKLPFFAPKNVPIPAAVSAFPEELYQAPRSWTEKAYPKLIYYNKLDKGGHFAAWEQPQLLVADLRAAFKSLR

Samples

Sample ID Description Type Environment
1 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
6 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
7 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
8 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
9 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
42 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
43 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
69 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
72 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
73 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
74 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
76 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
78 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
79 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
80 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
112 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
113 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
114 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
115 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
116 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
117 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
118 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
119 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
120 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
123 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
124 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
125 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
126 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
127 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
128 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
129 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
130 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
131 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
132 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
133 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
134 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
135 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
136 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
137 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
138 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
139 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
140 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
141 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
142 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
143 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
144 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
145 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
146 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
147 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
148 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
149 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
150 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
151 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
152 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
153 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
154 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
155 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
158 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
159 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
160 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
161 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
162 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
165 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
169 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
170 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
171 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
172 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
173 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
174 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
175 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
176 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
177 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
178 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
179 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
180 2643221584 Caulobacter sp. Root656 Isolate Unclassified
181 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
182 2818991457 Xanthomonas translucens 569 Isolate Unclassified
183 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
184 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
185 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.22
Metatranscriptomes 0.8
Isolates 3.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.37
Nodule 0.4
Rhizoplane 2.39
Rhizosphere 83.27
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157374_10004786 3300013296 Bacteria 11356
2 JGI25159J45721_1000476 3300002987 Bacteria 18463
3 rootH1_10216689 3300003323 Bacteria 3570
4 JGI25160J50197_1000078 3300003354 Bacteria 102092
5 JGI25407J50210_10002797 3300003373 Bacteria 4148
6 JGI25407J50210_10019862 3300003373 Bacteria 1747
7 JGI25161J50226_1000059 3300003374 Bacteria 102092
8 Ga0055543_1000058 3300004625 Bacteria 102130
9 Ga0058860_10089080 3300004801 Bacteria 1586
10 Ga0065165_1000312 3300005262 Bacteria 79663
11 Ga0065165_1000400 3300005262 Bacteria 69947
12 Ga0070676_10061352 3300005328 Bacteria 2235
13 Ga0070683_100073867 3300005329 Bacteria 3184
14 Ga0070683_100111447 3300005329 Bacteria 2581
15 Ga0070670_100159035 3300005331 Bacteria 1958
16 Ga0068869_100011356 3300005334 Bacteria 5837
17 Ga0068869_100065538 3300005334 Bacteria 2674
18 Ga0070666_10002053 3300005335 Bacteria 12219
19 Ga0070666_10054787 3300005335 Bacteria 2690
20 Ga0070682_100023855 3300005337 Bacteria 3636
21 Ga0070661_100118319 3300005344 Bacteria 1982
22 Ga0070671_100000223 3300005355 Bacteria 37776
23 Ga0070671_100034185 3300005355 Bacteria 4208
24 Ga0070671_100080265 3300005355 Bacteria 2728
25 Ga0070673_100033411 3300005364 Bacteria 3884
26 Ga0070673_100129126 3300005364 Bacteria 2118
27 Ga0070709_10000399 3300005434 Bacteria 26560
28 Ga0070700_100021225 3300005441 Bacteria 3773
29 Ga0070663_100015287 3300005455 Bacteria 4950
30 Ga0070662_100000346 3300005457 Bacteria 27732
31 Ga0070662_100066022 3300005457 Bacteria 2654
32 Ga0070685_10090327 3300005466 Bacteria 1852
33 Ga0070698_100004481 3300005471 Bacteria 15353
34 Ga0070684_100044407 3300005535 Bacteria 3844
35 Ga0070697_100023556 3300005536 Bacteria 4895
36 Ga0070695_100022010 3300005545 Bacteria 3907
37 Ga0070696_100093588 3300005546 Bacteria 2144
38 Ga0070665_100000116 3300005548 Bacteria 150141
39 Ga0070665_100061550 3300005548 Bacteria 3763
40 Ga0070704_100287456 3300005549 Bacteria 1365
41 Ga0068857_100076743 3300005577 Bacteria 2980
42 Ga0068854_100057168 3300005578 Bacteria 2813
43 Ga0068856_100169097 3300005614 Bacteria 2198
44 Ga0068852_100332982 3300005616 Bacteria 1478
45 Ga0068859_100103044 3300005617 Bacteria 2912
46 Ga0068864_100218674 3300005618 Bacteria 1757
47 Ga0068866_10022968 3300005718 Bacteria 2895
48 Ga0068866_10039385 3300005718 Bacteria 2334
49 Ga0068851_10006163 3300005834 Bacteria 5471
50 Ga0068863_100079584 3300005841 Bacteria 3103
51 Ga0081455_10018305 3300005937 Bacteria 6678
52 Ga0081538_10005674 3300005981 Bacteria 11175
53 Ga0070715_10044428 3300006163 Bacteria 1878
54 Ga0070716_100008098 3300006173 Bacteria 5204
55 Ga0075366_10003002 3300006195 Bacteria 8799
56 Ga0097621_100288765 3300006237 Bacteria 1446
57 Ga0075428_100006006 3300006844 Bacteria 13491
58 Ga0075433_10005843 3300006852 Bacteria 9692
59 Ga0075433_10008775 3300006852 Bacteria 8065
60 Ga0075433_10009501 3300006852 Bacteria 7771
61 Ga0075434_100004980 3300006871 Bacteria 12050
62 Ga0075434_100010880 3300006871 Bacteria 8553
63 Ga0075434_100120542 3300006871 Bacteria 2638
64 Ga0075436_100002603 3300006914 Bacteria 12393
65 Ga0075436_100140347 3300006914 Bacteria 1698
66 Ga0097620_100103040 3300006931 Bacteria 2912
67 Ga0075435_100008074 3300007076 Bacteria 7535
68 Ga0075435_100010412 3300007076 Bacteria 6802
69 Ga0075435_100021162 3300007076 Bacteria 4998
70 Ga0105240_10001626 3300009093 Bacteria 38125
71 Ga0111539_10003578 3300009094 Bacteria 20479
72 Ga0111539_10092776 3300009094 Bacteria 3547
73 Ga0114129_10122854 3300009147 Bacteria 3572
74 Ga0114129_10151119 3300009147 Bacteria 3178
75 Ga0114129_10289914 3300009147 Bacteria 2184
76 Ga0105243_10027108 3300009148 Bacteria 4388
77 Ga0105243_10095706 3300009148 Bacteria 2455
78 Ga0105242_10082553 3300009176 Bacteria 2690
79 Ga0105248_10201391 3300009177 Bacteria 2243
80 Ga0105237_10003557 3300009545 Bacteria 18468
81 Ga0105238_10027103 3300009551 Bacteria 5840
82 Ga0105238_10165395 3300009551 Bacteria 2188
83 Ga0105239_10003991 3300010375 Bacteria 17876
84 Ga0105239_10005751 3300010375 Bacteria 14465
85 Ga0105239_10177468 3300010375 Bacteria 2383
86 Ga0157370_10000305 3300013104 Bacteria 61632
87 Ga0157370_10000708 3300013104 Bacteria 41766
88 Ga0157374_10102408 3300013296 Bacteria 2746
89 Ga0157378_10172781 3300013297 Bacteria 2028
90 Ga0163162_10009811 3300013306 Bacteria 9318
91 Ga0163162_10035473 3300013306 Bacteria 4969
92 Ga0157372_10177510 3300013307 Bacteria 2465
93 Ga0157372_10208341 3300013307 Bacteria 2265
94 Ga0157375_10132878 3300013308 Bacteria 2610
95 Ga0163163_10170113 3300014325 Bacteria 2225
96 Ga0157380_10041642 3300014326 Bacteria 3586
97 Ga0182008_10024682 3300014497 Bacteria 3058
98 Ga0157377_10075515 3300014745 Bacteria 1957
99 Ga0157376_10017613 3300014969 Bacteria 5455
100 Ga0157376_10028159 3300014969 Bacteria 4463
101 Ga0182006_1009388 3300015261 Bacteria 4385
102 Ga0182007_10003577 3300015262 Bacteria 7304
103 Ga0163161_10027364 3300017792 Bacteria 4044
104 Ga0206351_10071352 3300020077 Bacteria 1624
105 Ga0213876_10000169 3300021384 Bacteria 68458
106 Ga0209677_100252 3300025253 Bacteria 36555
107 Ga0209233_1000139 3300025261 Bacteria 197070
108 Ga0209130_1000774 3300025284 Bacteria 27614
109 Ga0207426_1000083 3300025302 Bacteria 298770
110 Ga0207656_10033171 3300025321 Bacteria 2149
111 Ga0207688_10000790 3300025901 Bacteria 15782
112 Ga0207688_10046013 3300025901 Bacteria 2436
113 Ga0207680_10018257 3300025903 Bacteria 3724
114 Ga0207680_10073569 3300025903 Bacteria 2125
115 Ga0207699_10000272 3300025906 Bacteria 28425
116 Ga0207645_10079245 3300025907 Bacteria 2105
117 Ga0207705_10083741 3300025909 Bacteria 2327
118 Ga0207695_10000423 3300025913 Bacteria 93807
119 Ga0207671_10000148 3300025914 Bacteria 108473
120 Ga0207659_10027929 3300025926 Bacteria 3828
121 Ga0207687_10040521 3300025927 Bacteria 3193
122 Ga0207644_10000876 3300025931 Bacteria 18994
123 Ga0207644_10060960 3300025931 Bacteria 2731
124 Ga0207706_10000259 3300025933 Bacteria 57912
125 Ga0207706_10062052 3300025933 Bacteria 3292
126 Ga0207706_10276265 3300025933 Bacteria 1466
127 Ga0207670_10048196 3300025936 Bacteria 2841
128 Ga0207669_10066557 3300025937 Bacteria 2241
129 Ga0207665_10009769 3300025939 Bacteria 6300
130 Ga0207711_10011625 3300025941 Bacteria 7314
131 Ga0207711_10388409 3300025941 Bacteria 1296
132 Ga0207689_10008979 3300025942 Bacteria 8658
133 Ga0207689_10046296 3300025942 Bacteria 3595
134 Ga0207661_10065117 3300025944 Bacteria 2958
135 Ga0207679_10179381 3300025945 Bacteria 1751
136 Ga0207668_10015050 3300025972 Bacteria 4801
137 Ga0207640_10121215 3300025981 Bacteria 1874
138 Ga0207677_10011169 3300026023 Bacteria 5108
139 Ga0207678_10025696 3300026067 Bacteria 5140
140 Ga0207708_10020220 3300026075 Bacteria 5021
141 Ga0207708_10087982 3300026075 Bacteria 2393
142 Ga0207702_10049737 3300026078 Bacteria 3537
143 Ga0207648_10047060 3300026089 Bacteria 3781
144 Ga0207648_10049975 3300026089 Bacteria 3657
145 Ga0207676_10141121 3300026095 Bacteria 2063
146 Ga0207674_10064855 3300026116 Bacteria 3683
147 Ga0207675_100054626 3300026118 Bacteria 3726
148 Ga0207675_100215933 3300026118 Bacteria 1847
149 Ga0207428_10001136 3300027907 Bacteria 28891
150 Ga0207428_10002178 3300027907 Bacteria 19674
151 Ga0268266_10000064 3300028379 Bacteria 249533
152 Ga0268266_10024475 3300028379 Bacteria 5134
153 Ga0268266_10070880 3300028379 Bacteria 3020
154 Ga0307517_10006765 3300028786 Bacteria 16871
155 Ga0307515_10185943 3300028794 Bacteria 2007
156 Ga0307407_10018062 3300031903 Bacteria 3556
157 Ga0307412_10016646 3300031911 Bacteria 4386
158 Ga0307414_10099380 3300032004 Bacteria 2186
159 Ga0307510_10000766 3300033180 Bacteria 33227
160 Ga0373943_0067564 3300035170 Bacteria 1803
161 Ga0373935_0061807 3300035692 Bacteria 2398
162 Ga0373927_0022971 3300035695 Bacteria 4085
163 Ga0373925_0044739 3300037068 Bacteria 3288
164 Ga0436365_1207177 3300039437 Bacteria 90363
165 Ga0436363_0847024 3300039450 Bacteria 1416
166 Ga0439448_0001066 3300042005 Bacteria 6886
167 Ga0450890_006612 3300042127 Bacteria 1481
168 Ga0439459_0002667 3300042438 Bacteria 2769
169 Ga0495638_0001098 3300046460 Bacteria 26384
170 Ga0495650_0000007 3300046471 Bacteria 718072
171 Ga0495650_0000057 3300046471 Bacteria 303569
172 Ga0495582_0015841 3300046473 Bacteria 4134
173 Ga0495584_0103773 3300046491 Bacteria 1437
174 Ga0495606_0000012 3300046507 Bacteria 294304
175 Ga0495610_0043509 3300046512 Bacteria 2237
176 Ga0495616_0000044 3300046513 Bacteria 117255
177 Ga0495616_0002005 3300046513 Bacteria 13700
178 Ga0495620_0059050 3300046515 Bacteria 1604
179 Ga0495628_0132819 3300046516 Bacteria 1903
180 Ga0495631_0000952 3300046518 Bacteria 18022
181 Ga0495637_0062813 3300046520 Bacteria 1519
182 Ga0495643_0015831 3300046522 Bacteria 4444
183 Ga0495663_0026664 3300046525 Bacteria 1693
184 Ga0495654_0000053 3300046530 Bacteria 145014
185 Ga0495665_0098605 3300046531 Bacteria 1534
186 Ga0495640_0094097 3300046533 Bacteria 1974
187 Ga0495656_0014011 3300046615 Bacteria 2998
188 Ga0495625_0000003 3300046660 Bacteria 686847
189 Ga0495625_0002048 3300046660 Bacteria 22650
190 Ga0495661_0001005 3300046665 Bacteria 25358
191 Ga0495661_0002119 3300046665 Bacteria 15559
192 Ga0495647_0017008 3300046681 Bacteria 2569
193 Ga0495647_0081986 3300046681 Bacteria 1309
194 Ga0495658_0007445 3300046683 Bacteria 5418
195 Ga0495658_0049111 3300046683 Bacteria 2382
196 Ga0495669_0069150 3300046684 Bacteria 1607
197 Ga0495649_0000002 3300046694 Bacteria 1093458
198 Ga0495687_000320 3300047443 Bacteria 62358
199 Ga0495687_001714 3300047443 Bacteria 19419
200 Ga0495686_0000083 3300047472 Bacteria 198933
201 Ga0495686_0001186 3300047472 Bacteria 30396
202 Ga0495686_0001953 3300047472 Bacteria 20514
203 Ga0495686_0024586 3300047472 Bacteria 3956
204 Ga0495686_0033653 3300047472 Bacteria 3307
205 Ga0495686_0072744 3300047472 Bacteria 2113
206 Ga0495686_0143148 3300047472 Bacteria 1409
207 Ga0496103_0011796 3300048906 Bacteria 5184
208 Ga0496109_0090271 3300048912 Bacteria 2834
209 Ga0496110_0106824 3300048913 Bacteria 2512
210 Ga0496112_0003544 3300048915 Bacteria 12961
211 Ga0496114_0000032 3300048917 Bacteria 167029
212 Ga0496115_0000001 3300048918 Bacteria 367230
213 Ga0496116_0009342 3300048919 Bacteria 8373
214 Ga0496117_0005791 3300048920 Bacteria 12825
215 Ga0496118_0013505 3300048921 Bacteria 7716
216 Ga0496119_0004499 3300048922 Bacteria 13849
217 Ga0496121_0002069 3300048924 Bacteria 31763
218 Ga0496125_0002427 3300048928 Bacteria 24245
219 Ga0496126_0021799 3300048929 Bacteria 6250
220 Ga0501241_002063 3300049758 Bacteria 3933
221 nmdc:mga0k408_593_c1 3300050493 Bacteria 8798
222 nmdc:mga05p37_42881_c1 3300050507 Bacteria 5562
223 nmdc:mga05p37_46284_c1 3300050507 Bacteria 5350
224 nmdc:mga05p37_76725_c1 3300050507 Bacteria 4114
225 nmdc:mga08y16_8447_c1 3300050511 Bacteria 10782
226 nmdc:mga08y16_88835_c1 3300050511 Bacteria 3221
227 nmdc:mga0n895_1595_c1 3300050512 Bacteria 17073
228 nmdc:mga0n895_25226_c1 3300050512 Bacteria 5615
229 nmdc:mga0n895_5001_c1 3300050512 Bacteria 10995
230 nmdc:mga0n895_53527_c1 3300050512 Bacteria 3966
231 nmdc:mga0rr50_10474_c1 3300050513 Bacteria 5884
232 nmdc:mga0rr50_14865_c1 3300050513 Bacteria 5122
233 nmdc:mga08x19_1894_c1 3300050514 Bacteria 12814
234 nmdc:mga0a205_10152_c1 3300050515 Bacteria 8646
235 nmdc:mga0a205_138216_c1 3300050515 Bacteria 2336
236 nmdc:mga0a205_18976_c1 3300050515 Bacteria 6478
237 nmdc:mga0a205_315916_c1 3300050515 Bacteria 1434
238 Ga0500608_003726 3300053122 Bacteria 5775
239 Ga0500614_005421 3300053123 Bacteria 2677
240 Ga0500616_0005282 3300053153 Bacteria 8827
241 Ga0500627_0041987 3300053158 Bacteria 1967
242 2585282535 2582581308 Bacteria 7413247
243 2585536233 2585427527 Bacteria 7273426
244 2585557521 2585427530 Bacteria 7383882
245 2616311646 2615840626 Bacteria 7921970
246 2643931182 2643221584 Bacteria 5511711
247 2819642043 2818991453 Bacteria 7181617
248 2819664000 2818991457 Bacteria 5323295
249 2852685745 2852684882 Bacteria 5463342
250 2857509155 2857504554 Bacteria 5369913
251 2884964232 2884960567 Bacteria 5437054
252 Ga0157374_10004786
253 JGI25159J45721_1000476
254 rootH1_10216689
255 JGI25160J50197_1000078
256 JGI25407J50210_10002797
257 JGI25407J50210_10019862
258 JGI25161J50226_1000059
259 Ga0055543_1000058
260 Ga0058860_10089080
261 Ga0065165_1000312
262 Ga0065165_1000400
263 Ga0070676_10061352
264 Ga0070683_100073867
265 Ga0070683_100111447
266 Ga0070670_100159035
267 Ga0068869_100011356
268 Ga0068869_100065538
269 Ga0070666_10002053
270 Ga0070666_10054787
271 Ga0070682_100023855
272 Ga0070661_100118319
273 Ga0070671_100000223
274 Ga0070671_100034185
275 Ga0070671_100080265
276 Ga0070673_100033411
277 Ga0070673_100129126
278 Ga0070709_10000399
279 Ga0070700_100021225
280 Ga0070663_100015287
281 Ga0070662_100000346
282 Ga0070662_100066022
283 Ga0070685_10090327
284 Ga0070698_100004481
285 Ga0070684_100044407
286 Ga0070697_100023556
287 Ga0070695_100022010
288 Ga0070696_100093588
289 Ga0070665_100000116
290 Ga0070665_100061550
291 Ga0070704_100287456
292 Ga0068857_100076743
293 Ga0068854_100057168
294 Ga0068856_100169097
295 Ga0068852_100332982
296 Ga0068859_100103044
297 Ga0068864_100218674
298 Ga0068866_10022968
299 Ga0068866_10039385
300 Ga0068851_10006163
301 Ga0068863_100079584
302 Ga0081455_10018305
303 Ga0081538_10005674
304 Ga0070715_10044428
305 Ga0070716_100008098
306 Ga0075366_10003002
307 Ga0097621_100288765
308 Ga0075428_100006006
309 Ga0075433_10005843
310 Ga0075433_10008775
311 Ga0075433_10009501
312 Ga0075434_100004980
313 Ga0075434_100010880
314 Ga0075434_100120542
315 Ga0075436_100002603
316 Ga0075436_100140347
317 Ga0097620_100103040
318 Ga0075435_100008074
319 Ga0075435_100010412
320 Ga0075435_100021162
321 Ga0105240_10001626
322 Ga0111539_10003578
323 Ga0111539_10092776
324 Ga0114129_10122854
325 Ga0114129_10151119
326 Ga0114129_10289914
327 Ga0105243_10027108
328 Ga0105243_10095706
329 Ga0105242_10082553
330 Ga0105248_10201391
331 Ga0105237_10003557
332 Ga0105238_10027103
333 Ga0105238_10165395
334 Ga0105239_10003991
335 Ga0105239_10005751
336 Ga0105239_10177468
337 Ga0157370_10000305
338 Ga0157370_10000708
339 Ga0157374_10102408
340 Ga0157378_10172781
341 Ga0163162_10009811
342 Ga0163162_10035473
343 Ga0157372_10177510
344 Ga0157372_10208341
345 Ga0157375_10132878
346 Ga0163163_10170113
347 Ga0157380_10041642
348 Ga0182008_10024682
349 Ga0157377_10075515
350 Ga0157376_10017613
351 Ga0157376_10028159
352 Ga0182006_1009388
353 Ga0182007_10003577
354 Ga0163161_10027364
355 Ga0206351_10071352
356 Ga0213876_10000169
357 Ga0209677_100252
358 Ga0209233_1000139
359 Ga0209130_1000774
360 Ga0207426_1000083
361 Ga0207656_10033171
362 Ga0207688_10000790
363 Ga0207688_10046013
364 Ga0207680_10018257
365 Ga0207680_10073569
366 Ga0207699_10000272
367 Ga0207645_10079245
368 Ga0207705_10083741
369 Ga0207695_10000423
370 Ga0207671_10000148
371 Ga0207659_10027929
372 Ga0207687_10040521
373 Ga0207644_10000876
374 Ga0207644_10060960
375 Ga0207706_10000259
376 Ga0207706_10062052
377 Ga0207706_10276265
378 Ga0207670_10048196
379 Ga0207669_10066557
380 Ga0207665_10009769
381 Ga0207711_10011625
382 Ga0207711_10388409
383 Ga0207689_10008979
384 Ga0207689_10046296
385 Ga0207661_10065117
386 Ga0207679_10179381
387 Ga0207668_10015050
388 Ga0207640_10121215
389 Ga0207677_10011169
390 Ga0207678_10025696
391 Ga0207708_10020220
392 Ga0207708_10087982
393 Ga0207702_10049737
394 Ga0207648_10047060
395 Ga0207648_10049975
396 Ga0207676_10141121
397 Ga0207674_10064855
398 Ga0207675_100054626
399 Ga0207675_100215933
400 Ga0207428_10001136
401 Ga0207428_10002178
402 Ga0268266_10000064
403 Ga0268266_10024475
404 Ga0268266_10070880
405 Ga0307517_10006765
406 Ga0307515_10185943
407 Ga0307407_10018062
408 Ga0307412_10016646
409 Ga0307414_10099380
410 Ga0307510_10000766
411 Ga0373943_0067564
412 Ga0373935_0061807
413 Ga0373927_0022971
414 Ga0373925_0044739
415 Ga0436365_1207177
416 Ga0436363_0847024
417 Ga0439448_0001066
418 Ga0450890_006612
419 Ga0439459_0002667
420 Ga0495638_0001098
421 Ga0495650_0000007
422 Ga0495650_0000057
423 Ga0495582_0015841
424 Ga0495584_0103773
425 Ga0495606_0000012
426 Ga0495610_0043509
427 Ga0495616_0000044
428 Ga0495616_0002005
429 Ga0495620_0059050
430 Ga0495628_0132819
431 Ga0495631_0000952
432 Ga0495637_0062813
433 Ga0495643_0015831
434 Ga0495663_0026664
435 Ga0495654_0000053
436 Ga0495665_0098605
437 Ga0495640_0094097
438 Ga0495656_0014011
439 Ga0495625_0000003
440 Ga0495625_0002048
441 Ga0495661_0001005
442 Ga0495661_0002119
443 Ga0495647_0017008
444 Ga0495647_0081986
445 Ga0495658_0007445
446 Ga0495658_0049111
447 Ga0495669_0069150
448 Ga0495649_0000002
449 Ga0495687_000320
450 Ga0495687_001714
451 Ga0495686_0000083
452 Ga0495686_0001186
453 Ga0495686_0001953
454 Ga0495686_0024586
455 Ga0495686_0033653
456 Ga0495686_0072744
457 Ga0495686_0143148
458 Ga0496103_0011796
459 Ga0496109_0090271
460 Ga0496110_0106824
461 Ga0496112_0003544
462 Ga0496114_0000032
463 Ga0496115_0000001
464 Ga0496116_0009342
465 Ga0496117_0005791
466 Ga0496118_0013505
467 Ga0496119_0004499
468 Ga0496121_0002069
469 Ga0496125_0002427
470 Ga0496126_0021799
471 Ga0501241_002063
472 nmdc:mga0k408_593_c1
473 nmdc:mga05p37_42881_c1
474 nmdc:mga05p37_46284_c1
475 nmdc:mga05p37_76725_c1
476 nmdc:mga08y16_8447_c1
477 nmdc:mga08y16_88835_c1
478 nmdc:mga0n895_1595_c1
479 nmdc:mga0n895_25226_c1
480 nmdc:mga0n895_5001_c1
481 nmdc:mga0n895_53527_c1
482 nmdc:mga0rr50_10474_c1
483 nmdc:mga0rr50_14865_c1
484 nmdc:mga08x19_1894_c1
485 nmdc:mga0a205_10152_c1
486 nmdc:mga0a205_138216_c1
487 nmdc:mga0a205_18976_c1
488 nmdc:mga0a205_315916_c1
489 Ga0500608_003726
490 Ga0500614_005421
491 Ga0500616_0005282
492 Ga0500627_0041987
493 2585282535
494 2585536233
495 2585557521
496 2616311646
497 2643931182
498 2819642043
499 2819664000
500 2852685745
501 2857509155
502 2884964232

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06441

EHN

Epoxide hydrolase N terminus

63

168

0.97

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

154

314

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
5f4z-assembly3.cif.gz_E the crystal structure of an epoxide hydrolase from streptomyces carzinostaticus subsp. neocarzinostaticus 0.9017 47 440
5f4z-assembly3.cif.gz_E the crystal structure of an epoxide hydrolase from streptomyces carzinostaticus subsp. neocarzinostaticus 0.8972 47 440
4qa9-assembly1.cif.gz_A ensemble refinement of an epoxide hydrolase from streptomyces carzinostaticus subsp. neocarzinostaticus. 0.8879 43 440
4qa9-assembly1.cif.gz_A ensemble refinement of an epoxide hydrolase from streptomyces carzinostaticus subsp. neocarzinostaticus. 0.8857 43 440
4qla-assembly1.cif.gz_B crystal structure of juvenile hormone epoxide hydrolase from the silkworm bombyx mori 0.8794 44 438
ID Description Score Start End Superfamily
4qa9A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8879 43 440 3.40.50.1820
4qa9A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8857 43 440 3.40.50.1820
af_Q9D379_48_454_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8837 47 438 3.40.50.1820
af_Q23068_49_452_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8828 47 436 3.40.50.1820
4qlaB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8794 44 438 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A7Y8XZ70-F1-model_v4 Epoxide hydrolase 0.9804 45 437 GO:0004301
GO:0009056
GO:0097176
AF-A0A2V8PGR5-F1-model_v4 Multidrug MFS transporter 0.9804 172 438 GO:0004301
GO:0097176
AF-A0A534IK94-F1-model_v4 Epoxide hydrolase 1 0.9763 44 360 GO:0004301
GO:0009056
GO:0097176
AF-A0A1B4YV45-F1-model_v4 deleted 0.9748 32 438
AF-A0A1B4YV45-F1-model_v4 deleted 0.9701 32 438

Map