F362160

General Info

Members Datasets Scaffolds Average Seq Length
251 181 250 412

Family's Representative Sequence

Representative Sequence 3300005330|Ga0070690_100051682|Ga0070690_1000516823
Length 462
Sequence LAGVVAVAGGASPLSWPIGIGPYNTTLPVNRIALVTHTTSYGAAGFVEACRRAGSEVVLASDRCHVLDRSWHWPANSLVIDFSDPDEAAAVIAAADAREAPIAAVLPVGGELPAQVAASAARRLGLPANAPAAMASAGNKLLMRTRLASASDPAVRQPRYFAVACGTAPEVVAERVRAPGGVGFPCVVKPLTLSGSRGVMRADDGPSLAVALARLERLLADPALRRPDPDAAGQILVESFVRGPEYALEGILTRGELHVLALFDKPDPLDGPTFEETIYVTPSRRPLPDQRRISEAVAAAARALGLETGPVHAELRWDEDAGAPVLIEMAARPIGGLCARSLRFESGFSLEDVVVRHALGAADVPTRIGGASGVMMIPIPARVPSALRAVDGLEAARAVAGVDDVVISVRVGETLVPLPEGASYTGFIFATGEDAAAVERSLRTAHAHLRFTVAPLVPVMRR

Samples

Sample ID Description Type Environment
1 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
51 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
52 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
53 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
110 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
111 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
112 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
113 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
114 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
115 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
116 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
117 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
118 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
119 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
120 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
121 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
122 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
123 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
124 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
125 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
126 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
127 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
128 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
129 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
130 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
131 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
132 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
133 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
134 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
135 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
136 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
137 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
141 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
142 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
147 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
148 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
161 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
166 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
167 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
168 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
175 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
176 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
177 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
178 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
179 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
180 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
181 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.8
Metatranscriptomes 0.8
Isolates 0.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.79
Rhizosphere 96.81
Stem 0
Stem Tuber 0
Unclassified 0.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10004983 3300005328 Bacteria 7030
2 Ga0070683_100017667 3300005329 Bacteria 6302
3 Ga0070683_100073064 3300005329 Bacteria 3203
4 Ga0070690_100027805 3300005330 Bacteria 3499
5 Ga0070690_100051682 3300005330 Unclassified 2624
6 Ga0068869_100039917 3300005334 Bacteria 3353
7 Ga0070666_10000401 3300005335 Bacteria 27229
8 Ga0070680_100002169 3300005336 Bacteria 14460
9 Ga0070680_100088540 3300005336 Bacteria 2561
10 Ga0070680_100260900 3300005336 Bacteria 1466
11 Ga0068868_100085428 3300005338 Bacteria 2536
12 Ga0070689_100009778 3300005340 Bacteria 6815
13 Ga0070689_100019782 3300005340 Bacteria 4982
14 Ga0070691_10017599 3300005341 Bacteria 3288
15 Ga0070691_10026811 3300005341 Bacteria 2687
16 Ga0070691_10070202 3300005341 Unclassified 1699
17 Ga0070668_100059571 3300005347 Unclassified 2955
18 Ga0070674_100003378 3300005356 Bacteria 8947
19 Ga0070673_100003684 3300005364 Bacteria 9602
20 Ga0070673_100008153 3300005364 Bacteria 6950
21 Ga0070673_100008813 3300005364 Bacteria 6735
22 Ga0070667_100001393 3300005367 Bacteria 21626
23 Ga0070709_10005252 3300005434 Bacteria 7008
24 Ga0070709_10033739 3300005434 Bacteria 3098
25 Ga0070714_100009438 3300005435 Bacteria 7672
26 Ga0070714_100206754 3300005435 Bacteria 1798
27 Ga0070713_100000816 3300005436 Bacteria 20007
28 Ga0070711_100000738 3300005439 Bacteria 17042
29 Ga0070711_100022542 3300005439 Bacteria 4083
30 Ga0070705_100004737 3300005440 Bacteria 6621
31 Ga0070705_100008095 3300005440 Bacteria 5199
32 Ga0070694_100010217 3300005444 Bacteria 5780
33 Ga0070694_100051327 3300005444 Bacteria 2783
34 Ga0070708_100028601 3300005445 Bacteria 4798
35 Ga0070708_100043367 3300005445 Bacteria 3953
36 Ga0070663_100004637 3300005455 Bacteria 8097
37 Ga0070681_10183769 3300005458 Bacteria 2012
38 Ga0068867_100028236 3300005459 Bacteria 4039
39 Ga0070685_10036421 3300005466 Unclassified 2781
40 Ga0070706_100004009 3300005467 Bacteria 14313
41 Ga0070706_100017767 3300005467 Bacteria 6563
42 Ga0070706_100023667 3300005467 Bacteria 5654
43 Ga0070707_100000027 3300005468 Bacteria 124211
44 Ga0070707_100052797 3300005468 Bacteria 3897
45 Ga0070698_100050630 3300005471 Bacteria 4233
46 Ga0070699_100027809 3300005518 Bacteria 4877
47 Ga0070699_100031865 3300005518 Bacteria 4553
48 Ga0070699_100075742 3300005518 Unclassified 2929
49 Ga0070699_100102715 3300005518 Bacteria 2506
50 Ga0070699_100234529 3300005518 Bacteria 1637
51 Ga0070679_100010950 3300005530 Bacteria 8619
52 Ga0070684_100011179 3300005535 Bacteria 7145
53 Ga0070697_100028795 3300005536 Bacteria 4450
54 Ga0070697_100255742 3300005536 Bacteria 1498
55 Ga0070672_100006550 3300005543 Bacteria 7834
56 Ga0070672_100031699 3300005543 Bacteria 3982
57 Ga0070686_100005264 3300005544 Bacteria 7148
58 Ga0070695_100002463 3300005545 Bacteria 10660
59 Ga0070696_100064507 3300005546 Bacteria 2566
60 Ga0070696_100065389 3300005546 Bacteria 2549
61 Ga0070693_100029368 3300005547 Bacteria 2999
62 Ga0070665_100246974 3300005548 Bacteria 1785
63 Ga0070704_100103844 3300005549 Bacteria 2148
64 Ga0070704_100125644 3300005549 Bacteria 1979
65 Ga0070664_100038038 3300005564 Bacteria 4048
66 Ga0068857_100004093 3300005577 Bacteria 12290
67 Ga0068857_100046110 3300005577 Bacteria 3868
68 Ga0068857_100171694 3300005577 Bacteria 1971
69 Ga0068856_100001107 3300005614 Bacteria 28449
70 Ga0070702_100085622 3300005615 Bacteria 1899
71 Ga0068859_100005595 3300005617 Bacteria 12802
72 Ga0068859_100209577 3300005617 Bacteria 2035
73 Ga0068864_100079176 3300005618 Bacteria 2877
74 Ga0068863_100024269 3300005841 Bacteria 5783
75 Ga0068863_100079468 3300005841 Bacteria 3106
76 Ga0068858_100004424 3300005842 Bacteria 13782
77 Ga0068858_100053235 3300005842 Bacteria 3745
78 Ga0068860_100000666 3300005843 Bacteria 39791
79 Ga0068862_100018942 3300005844 Bacteria 5736
80 Ga0081455_10095449 3300005937 Bacteria 2400
81 Ga0081538_10006384 3300005981 Bacteria 10392
82 Ga0070717_10013534 3300006028 Bacteria 6256
83 Ga0070716_100000649 3300006173 Bacteria 14759
84 Ga0075428_100002295 3300006844 Bacteria 20695
85 Ga0075431_100078805 3300006847 Bacteria 3401
86 Ga0075433_10002436 3300006852 Bacteria 14166
87 Ga0075433_10134206 3300006852 Bacteria 2200
88 Ga0075434_100001124 3300006871 Bacteria 21997
89 Ga0075434_100036200 3300006871 Bacteria 4882
90 Ga0068865_100002325 3300006881 Bacteria 11208
91 Ga0097620_100005594 3300006931 Bacteria 12802
92 Ga0097620_100209586 3300006931 Bacteria 2035
93 Ga0075435_100071359 3300007076 Bacteria 2836
94 Ga0105240_10003958 3300009093 Bacteria 22879
95 Ga0111539_10000380 3300009094 Bacteria 54772
96 Ga0111539_10002907 3300009094 Bacteria 22722
97 Ga0111539_10005283 3300009094 Bacteria 16723
98 Ga0114129_10067425 3300009147 Bacteria 4991
99 Ga0114129_10115212 3300009147 Bacteria 3705
100 Ga0105248_10001797 3300009177 Bacteria 23850
101 Ga0105237_10084293 3300009545 Bacteria 3169
102 Ga0105249_10233712 3300009553 Bacteria 1814
103 Ga0157378_10004886 3300013297 Bacteria 11754
104 Ga0157375_10005962 3300013308 Bacteria 10626
105 Ga0157379_10002746 3300014968 Bacteria 14845
106 Ga0157376_10005030 3300014969 Bacteria 9218
107 Ga0206351_10259439 3300020077 Bacteria 1683
108 Ga0224712_10003520 3300022467 Unclassified 4084
109 Ga0207680_10028439 3300025903 Unclassified 3127
110 Ga0207699_10009542 3300025906 Bacteria 4838
111 Ga0207684_10006996 3300025910 Bacteria 10202
112 Ga0207684_10042317 3300025910 Bacteria 3861
113 Ga0207684_10065557 3300025910 Bacteria 3084
114 Ga0207707_10025683 3300025912 Bacteria 5152
115 Ga0207695_10005912 3300025913 Bacteria 16043
116 Ga0207663_10000116 3300025916 Bacteria 38574
117 Ga0207663_10004584 3300025916 Bacteria 6886
118 Ga0207660_10001570 3300025917 Bacteria 15315
119 Ga0207660_10071380 3300025917 Bacteria 2526
120 Ga0207662_10016565 3300025918 Bacteria 4161
121 Ga0207652_10041994 3300025921 Bacteria 3890
122 Ga0207646_10000035 3300025922 Bacteria 209056
123 Ga0207646_10019830 3300025922 Bacteria 6241
124 Ga0207681_10001585 3300025923 Bacteria 14639
125 Ga0207650_10006448 3300025925 Bacteria 7992
126 Ga0207664_10004461 3300025929 Bacteria 9480
127 Ga0207670_10046140 3300025936 Bacteria 2893
128 Ga0207670_10053832 3300025936 Unclassified 2713
129 Ga0207669_10002133 3300025937 Bacteria 8387
130 Ga0207691_10013532 3300025940 Bacteria 7803
131 Ga0207691_10018217 3300025940 Bacteria 6651
132 Ga0207711_10003018 3300025941 Bacteria 14717
133 Ga0207689_10005504 3300025942 Bacteria 11324
134 Ga0207689_10028993 3300025942 Bacteria 4627
135 Ga0207661_10001719 3300025944 Bacteria 14980
136 Ga0207661_10160563 3300025944 Bacteria 1950
137 Ga0207679_10025326 3300025945 Bacteria 4078
138 Ga0207651_10007872 3300025960 Bacteria 5707
139 Ga0207651_10007889 3300025960 Bacteria 5702
140 Ga0207712_10032489 3300025961 Bacteria 3523
141 Ga0207658_10003804 3300025986 Bacteria 10630
142 Ga0207703_10009670 3300026035 Bacteria 7568
143 Ga0207703_10087692 3300026035 Unclassified 2610
144 Ga0207678_10017124 3300026067 Bacteria 6363
145 Ga0207702_10011052 3300026078 Bacteria 7536
146 Ga0207641_10034541 3300026088 Bacteria 4207
147 Ga0207641_10066396 3300026088 Bacteria 3088
148 Ga0207648_10008013 3300026089 Bacteria 10295
149 Ga0207648_10010107 3300026089 Bacteria 8971
150 Ga0207676_10103883 3300026095 Bacteria 2362
151 Ga0207674_10058400 3300026116 Bacteria 3908
152 Ga0207674_10079690 3300026116 Bacteria 3278
153 Ga0207675_100003944 3300026118 Bacteria 14402
154 Ga0207683_10035263 3300026121 Bacteria 4350
155 Ga0207428_10000226 3300027907 Bacteria 77924
156 Ga0207428_10004521 3300027907 Bacteria 13191
157 Ga0268266_10112635 3300028379 Bacteria 2412
158 Ga0268265_10011998 3300028380 Bacteria 5864
159 Ga0268264_10004847 3300028381 Bacteria 11402
160 Ga0268264_10155801 3300028381 Unclassified 2053
161 Ga0265338_10011591 3300028800 Bacteria 10163
162 Ga0373923_0039805 3300035111 Unclassified 1932
163 Ga0373946_0031561 3300035171 Bacteria 2123
164 Ga0373955_0028559 3300035172 Bacteria 2893
165 Ga0373927_0000124 3300035695 Bacteria 58788
166 Ga0373927_0071168 3300035695 Bacteria 2251
167 Ga0373927_0084396 3300035695 Bacteria 2060
168 Ga0373933_0007913 3300035724 Bacteria 5801
169 Ga0373947_0022186 3300035725 Bacteria 3679
170 Ga0451577_0004365 3300042876 Bacteria 14961
171 Ga0451577_0222904 3300042876 Bacteria 1704
172 Ga0466972_0037389 3300044658 Unclassified 2374
173 Ga0453683_0033547 3300044673 Bacteria 3238
174 Ga0453683_0073961 3300044673 Bacteria 2133
175 Ga0466966_0040693 3300044684 Bacteria 2990
176 Ga0466964_0001661 3300044706 Archaea 7690
177 Ga0453684_0017077 3300044712 Bacteria 11268
178 Ga0466971_0013736 3300044719 Unclassified 3560
179 Ga0466968_0024726 3300044735 Unclassified 2456
180 Ga0466970_0006414 3300044765 Archaea 5883
181 Ga0466957_0020527 3300044842 Bacteria 3887
182 Ga0466957_0056405 3300044842 Bacteria 2402
183 Ga0466959_0015930 3300045049 Bacteria 5484
184 Ga0451576_0026068 3300045051 Bacteria 6289
185 Ga0451576_0143598 3300045051 Bacteria 2489
186 Ga0466958_0001521 3300045836 Bacteria 11109
187 Ga0495592_0048482 3300046454 Bacteria 3160
188 Ga0495580_0129070 3300046472 Unclassified 1754
189 Ga0495628_0080048 3300046516 Bacteria 2540
190 Ga0495652_0056040 3300046529 Bacteria 3350
191 Ga0495652_0188178 3300046529 Bacteria 1578
192 Ga0495667_0003590 3300046559 Bacteria 10435
193 Ga0495634_0040771 3300046642 Bacteria 3155
194 Ga0495635_0076646 3300046663 Bacteria 2291
195 Ga0495657_0103940 3300046675 Bacteria 1807
196 Ga0495581_0117415 3300047315 Bacteria 1547
197 Ga0495674_0092769 3300047319 Bacteria 2577
198 Ga0495680_0023038 3300047322 Bacteria 5183
199 Ga0495680_0073701 3300047322 Bacteria 2594
200 Ga0495684_0061382 3300047471 Bacteria 2860
201 Ga0495684_0069015 3300047471 Bacteria 2687
202 Ga0496100_0010501 3300048903 Bacteria 5244
203 Ga0496101_0079711 3300048904 Bacteria 2418
204 Ga0496102_0010255 3300048905 Bacteria 8056
205 Ga0496106_0000582 3300048909 Bacteria 26115
206 Ga0496108_0010595 3300048911 Bacteria 7479
207 Ga0496110_0003355 3300048913 Bacteria 12224
208 Ga0496114_0000258 3300048917 Bacteria 38413
209 Ga0501031_0026937 3300049568 Bacteria 3747
210 Ga0501032_0003089 3300049569 Bacteria 12840
211 Ga0501034_0041336 3300049571 Bacteria 4664
212 Ga0501036_0000197 3300049572 Bacteria 39908
213 Ga0501037_0003205 3300049573 Bacteria 11860
214 Ga0501037_0033038 3300049573 Bacteria 3822
215 Ga0501038_0007107 3300049574 Bacteria 10339
216 Ga0501039_0004023 3300049575 Bacteria 11047
217 Ga0501040_0064866 3300049576 Bacteria 2515
218 Ga0501043_0005041 3300049579 Bacteria 10681
219 Ga0501046_0009134 3300049580 Bacteria 8587
220 Ga0501047_0061974 3300049581 Bacteria 3608
221 Ga0501047_0086197 3300049581 Bacteria 3018
222 Ga0501048_0025234 3300049582 Bacteria 4332
223 Ga0501067_0011297 3300049583 Bacteria 4944
224 Ga0501068_0009210 3300049584 Bacteria 5517
225 Ga0501072_0000088 3300049588 Bacteria 66821
226 Ga0501073_0002932 3300049589 Bacteria 12802
227 Ga0501074_0003505 3300049590 Bacteria 11137
228 Ga0501076_0022448 3300049592 Bacteria 4849
229 Ga0501076_0294605 3300049592 Bacteria 1329
230 Ga0501079_0001711 3300049741 Bacteria 15653
231 Ga0501080_0036738 3300049742 Bacteria 4572
232 Ga0501083_0005322 3300049744 Bacteria 9102
233 Ga0501035_0019713 3300049822 Bacteria 6196
234 Ga0501044_0040515 3300049823 Bacteria 4854
235 nmdc:mga05p37_137274_c1 3300050507 Bacteria 2512
236 nmdc:mga05p37_312027_c1 3300050507 Bacteria 1864
237 nmdc:mga0qj67_220554_c1 3300050509 Bacteria 1539
238 nmdc:mga08y16_17303_c1 3300050511 Bacteria 7589
239 nmdc:mga08y16_22660_c1 3300050511 Bacteria 6631
240 nmdc:mga08y16_3296_c1 3300050511 Bacteria 16720
241 nmdc:mga08y16_7252_c1 3300050511 Bacteria 11638
242 nmdc:mga0n895_4362_c1 3300050512 Bacteria 11598
243 nmdc:mga08x19_17608_c1 3300050514 Bacteria 4375
244 nmdc:mga0a205_150187_c1 3300050515 Bacteria 2230
245 Ga0495601_0047641 3300053077 Unclassified 2699
246 Ga0495601_0073422 3300053077 Bacteria 2187
247 Ga0495612_0045846 3300053078 Unclassified 1790
248 Ga0501084_0006059 3300054114 Bacteria 9945
249 Ga0501082_0041762 3300060353 Bacteria 3954
250 Ga0466962_0021907 3300061719 Bacteria 3068

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035695 Ga0373927_0084396 Ga0373927_0084396_18_1127 340
2 3300049592 Ga0501076_0294605 Ga0501076_0294605_236_1294 344
3 3300005329 Ga0070683_100073064 Ga0070683_1000730643 349
4 3300025944 Ga0207661_10160563 Ga0207661_101605632 351
5 3300005458 Ga0070681_10183769 Ga0070681_101837692 353
6 3300046675 Ga0495657_0103940 Ga0495657_0103940_701_1780 354
7 3300035171 Ga0373946_0031561 Ga0373946_0031561_139_1464 356
8 3300035172 Ga0373955_0028559 Ga0373955_0028559_1455_2780 356
9 3300046516 Ga0495628_0080048 Ga0495628_0080048_1153_2478 356
10 3300046642 Ga0495634_0040771 Ga0495634_0040771_1320_2645 356
11 3300053077 Ga0495601_0073422 Ga0495601_0073422_115_1440 356
12 3300035725 Ga0373947_0022186 Ga0373947_0022186_2072_3454 359
13 3300005330 Ga0070690_100027805 Ga0070690_1000278053 364
14 3300005340 Ga0070689_100009778 Ga0070689_1000097786 364
15 3300005841 Ga0068863_100079468 Ga0068863_1000794683 364
16 3300026088 Ga0207641_10066396 Ga0207641_100663962 364
17 3300047315 Ga0495581_0117415 Ga0495581_0117415_20_1216 369
18 3300049568 Ga0501031_0026937 Ga0501031_0026937_2191_3438 371
19 3300049569 Ga0501032_0003089 Ga0501032_0003089_11548_12795 371
20 3300049571 Ga0501034_0041336 Ga0501034_0041336_36_1283 371
21 3300049572 Ga0501036_0000197 Ga0501036_0000197_27768_29015 371
22 3300049573 Ga0501037_0033038 Ga0501037_0033038_1770_3017 371
23 3300049574 Ga0501038_0007107 Ga0501038_0007107_6544_7791 371
24 3300049575 Ga0501039_0004023 Ga0501039_0004023_8330_9577 371
25 3300049579 Ga0501043_0005041 Ga0501043_0005041_8446_9693 371
26 3300049580 Ga0501046_0009134 Ga0501046_0009134_2261_3508 371
27 3300049581 Ga0501047_0061974 Ga0501047_0061974_789_2036 371
28 3300049582 Ga0501048_0025234 Ga0501048_0025234_1205_2452 371
29 3300049583 Ga0501067_0011297 Ga0501067_0011297_1864_3111 371
30 3300049584 Ga0501068_0009210 Ga0501068_0009210_3064_4311 371
31 3300049588 Ga0501072_0000088 Ga0501072_0000088_2537_3784 371
32 3300049589 Ga0501073_0002932 Ga0501073_0002932_2409_3656 371
33 3300049590 Ga0501074_0003505 Ga0501074_0003505_1573_2820 371
34 3300049592 Ga0501076_0022448 Ga0501076_0022448_2709_3956 371
35 3300049741 Ga0501079_0001711 Ga0501079_0001711_1864_3111 371
36 3300049742 Ga0501080_0036738 Ga0501080_0036738_1855_3102 371
37 3300049744 Ga0501083_0005322 Ga0501083_0005322_1312_2559 371
38 3300049822 Ga0501035_0019713 Ga0501035_0019713_3192_4439 371
39 3300049823 Ga0501044_0040515 Ga0501044_0040515_1346_2593 371
40 3300054114 Ga0501084_0006059 Ga0501084_0006059_7386_8633 371
41 3300060353 Ga0501082_0041762 Ga0501082_0041762_1471_2718 371
42 3300009094 Ga0111539_10005283 Ga0111539_1000528311 372
43 3300050511 nmdc:mga08y16_17303_c1 nmdc:mga08y16_17303_c1_6186_7493 374
44 3300006847 Ga0075431_100078805 Ga0075431_1000788053 375
45 3300047319 Ga0495674_0092769 Ga0495674_0092769_700_1845 376
46 3300005364 Ga0070673_100008153 Ga0070673_1000081533 377
47 3300005615 Ga0070702_100085622 Ga0070702_1000856221 377
48 3300025960 Ga0207651_10007889 Ga0207651_100078893 377
49 3300045051 Ga0451576_0143598 Ga0451576_0143598_1059_2267 377
50 3300005336 Ga0070680_100002169 Ga0070680_1000021695 381
51 3300005341 Ga0070691_10026811 Ga0070691_100268112 381
52 3300005981 Ga0081538_10006384 Ga0081538_1000638410 381
53 3300025917 Ga0207660_10001570 Ga0207660_100015708 381
54 3300046529 Ga0495652_0188178 Ga0495652_0188178_154_1371 381
55 3300005937 Ga0081455_10095449 Ga0081455_100954491 384
56 3300050511 nmdc:mga08y16_22660_c1 nmdc:mga08y16_22660_c1_2277_3596 385
57 3300025925 Ga0207650_10006448 Ga0207650_100064488 388
58 3300046454 Ga0495592_0048482 Ga0495592_0048482_1633_2814 388
59 3300046529 Ga0495652_0056040 Ga0495652_0056040_836_2017 388
60 3300046559 Ga0495667_0003590 Ga0495667_0003590_432_1613 388
61 3300046663 Ga0495635_0076646 Ga0495635_0076646_585_1766 388
62 3300047471 Ga0495684_0069015 Ga0495684_0069015_585_1766 388
63 3300005364 Ga0070673_100008813 Ga0070673_1000088133 390
64 3300025936 Ga0207670_10053832 Ga0207670_100538322 390
65 3300044719 Ga0466971_0013736 Ga0466971_0013736_1319_2536 391
66 3300044842 Ga0466957_0020527 Ga0466957_0020527_2390_3607 391
67 3300045049 Ga0466959_0015930 Ga0466959_0015930_3422_4639 391
68 3300045836 Ga0466958_0001521 Ga0466958_0001521_5838_7055 391
69 3300048904 Ga0496101_0079711 Ga0496101_0079711_814_2181 391
70 3300048917 Ga0496114_0000258 Ga0496114_0000258_2165_3532 391
71 3300061719 Ga0466962_0021907 Ga0466962_0021907_1708_2925 391
72 iso_pu_bacteria 2837183177 2837183843 391
73 3300035695 Ga0373927_0000124 Ga0373927_0000124_22492_23724 394
74 3300047322 Ga0495680_0073701 Ga0495680_0073701_21_1232 395
75 3300005434 Ga0070709_10033739 Ga0070709_100337392 396
76 3300005435 Ga0070714_100009438 Ga0070714_1000094382 396
77 3300005436 Ga0070713_100000816 Ga0070713_1000008165 396
78 3300005439 Ga0070711_100022542 Ga0070711_1000225423 396
79 3300009093 Ga0105240_10003958 Ga0105240_100039587 396
80 3300009545 Ga0105237_10084293 Ga0105237_100842934 396
81 3300025913 Ga0207695_10005912 Ga0207695_100059124 396
82 3300025916 Ga0207663_10004584 Ga0207663_100045845 396
83 3300025929 Ga0207664_10004461 Ga0207664_100044615 396
84 3300028379 Ga0268266_10112635 Ga0268266_101126353 396
85 3300035695 Ga0373927_0071168 Ga0373927_0071168_730_1965 396
86 3300046472 Ga0495580_0129070 Ga0495580_0129070_46_1281 396
87 3300047471 Ga0495684_0061382 Ga0495684_0061382_960_2195 396
88 3300005335 Ga0070666_10000401 Ga0070666_1000040121 397
89 3300005336 Ga0070680_100260900 Ga0070680_1002609001 397
90 3300005549 Ga0070704_100125644 Ga0070704_1001256441 397
91 3300005564 Ga0070664_100038038 Ga0070664_1000380384 397
92 3300005577 Ga0068857_100171694 Ga0068857_1001716943 397
93 3300005841 Ga0068863_100024269 Ga0068863_1000242692 397
94 3300005843 Ga0068860_100000666 Ga0068860_10000066622 397
95 3300013297 Ga0157378_10004886 Ga0157378_100048869 397
96 3300025912 Ga0207707_10025683 Ga0207707_100256832 397
97 3300025921 Ga0207652_10041994 Ga0207652_100419942 397
98 3300025986 Ga0207658_10003804 Ga0207658_100038044 397
99 3300048905 Ga0496102_0010255 Ga0496102_0010255_2584_3852 397
100 3300048909 Ga0496106_0000582 Ga0496106_0000582_4349_5617 397
101 3300048913 Ga0496110_0003355 Ga0496110_0003355_514_1782 397
102 3300005338 Ga0068868_100085428 Ga0068868_1000854283 398
103 3300005340 Ga0070689_100019782 Ga0070689_1000197825 398
104 3300005367 Ga0070667_100001393 Ga0070667_1000013939 398
105 3300005455 Ga0070663_100004637 Ga0070663_1000046375 398
106 3300005459 Ga0068867_100028236 Ga0068867_1000282361 398
107 3300005471 Ga0070698_100050630 Ga0070698_1000506304 398
108 3300005543 Ga0070672_100006550 Ga0070672_1000065506 398
109 3300005547 Ga0070693_100029368 Ga0070693_1000293682 398
110 3300005548 Ga0070665_100246974 Ga0070665_1002469742 398
111 3300005614 Ga0068856_100001107 Ga0068856_1000011076 398
112 3300005617 Ga0068859_100005595 Ga0068859_10000559510 398
113 3300005618 Ga0068864_100079176 Ga0068864_1000791762 398
114 3300005842 Ga0068858_100004424 Ga0068858_1000044246 398
115 3300006931 Ga0097620_100005594 Ga0097620_10000559410 398
116 3300009177 Ga0105248_10001797 Ga0105248_1000179711 398
117 3300013308 Ga0157375_10005962 Ga0157375_100059625 398
118 3300014968 Ga0157379_10002746 Ga0157379_100027467 398
119 3300014969 Ga0157376_10005030 Ga0157376_100050305 398
120 3300020077 Ga0206351_10259439 Ga0206351_102594391 398
121 3300025936 Ga0207670_10046140 Ga0207670_100461403 398
122 3300025940 Ga0207691_10018217 Ga0207691_100182174 398
123 3300025941 Ga0207711_10003018 Ga0207711_100030186 398
124 3300025945 Ga0207679_10025326 Ga0207679_100253264 398
125 3300026035 Ga0207703_10009670 Ga0207703_100096706 398
126 3300026067 Ga0207678_10017124 Ga0207678_100171247 398
127 3300026078 Ga0207702_10011052 Ga0207702_100110524 398
128 3300026088 Ga0207641_10034541 Ga0207641_100345412 398
129 3300026089 Ga0207648_10010107 Ga0207648_100101079 398
130 3300026095 Ga0207676_10103883 Ga0207676_101038833 398
131 3300028381 Ga0268264_10004847 Ga0268264_100048478 398
132 3300048903 Ga0496100_0010501 Ga0496100_0010501_120_1388 398
133 3300006028 Ga0070717_10013534 Ga0070717_100135344 399
134 3300050509 nmdc:mga0qj67_220554_c1 nmdc:mga0qj67_220554_c1_179_1435 399
135 3300005329 Ga0070683_100017667 Ga0070683_1000176675 400
136 3300005364 Ga0070673_100003684 Ga0070673_1000036844 400
137 3300005440 Ga0070705_100008095 Ga0070705_1000080953 400
138 3300005466 Ga0070685_10036421 Ga0070685_100364213 400
139 3300005535 Ga0070684_100011179 Ga0070684_1000111792 400
140 3300005543 Ga0070672_100031699 Ga0070672_1000316993 400
141 3300005544 Ga0070686_100005264 Ga0070686_1000052642 400
142 3300005545 Ga0070695_100002463 Ga0070695_1000024636 400
143 3300005546 Ga0070696_100065389 Ga0070696_1000653892 400
144 3300005617 Ga0068859_100209577 Ga0068859_1002095772 400
145 3300005842 Ga0068858_100053235 Ga0068858_1000532351 400
146 3300006881 Ga0068865_100002325 Ga0068865_1000023258 400
147 3300006931 Ga0097620_100209586 Ga0097620_1002095862 400
148 3300025918 Ga0207662_10016565 Ga0207662_100165653 400
149 3300025923 Ga0207681_10001585 Ga0207681_100015856 400
150 3300025937 Ga0207669_10002133 Ga0207669_100021333 400
151 3300025940 Ga0207691_10013532 Ga0207691_100135327 400
152 3300025942 Ga0207689_10028993 Ga0207689_100289933 400
153 3300025944 Ga0207661_10001719 Ga0207661_1000171914 400
154 3300025960 Ga0207651_10007872 Ga0207651_100078723 400
155 3300026035 Ga0207703_10087692 Ga0207703_100876922 400
156 3300026089 Ga0207648_10008013 Ga0207648_100080138 400
157 3300026121 Ga0207683_10035263 Ga0207683_100352632 400
158 3300028381 Ga0268264_10155801 Ga0268264_101558012 400
159 3300005434 Ga0070709_10005252 Ga0070709_100052526 401
160 3300005435 Ga0070714_100206754 Ga0070714_1002067542 401
161 3300005439 Ga0070711_100000738 Ga0070711_1000007384 401
162 3300005440 Ga0070705_100004737 Ga0070705_1000047373 401
163 3300005444 Ga0070694_100051327 Ga0070694_1000513272 401
164 3300005445 Ga0070708_100028601 Ga0070708_1000286016 401
165 3300005445 Ga0070708_100043367 Ga0070708_1000433673 401
166 3300005467 Ga0070706_100017767 Ga0070706_1000177673 401
167 3300005467 Ga0070706_100023667 Ga0070706_1000236678 401
168 3300005468 Ga0070707_100000027 Ga0070707_10000002741 401
169 3300005468 Ga0070707_100052797 Ga0070707_1000527974 401
170 3300005518 Ga0070699_100031865 Ga0070699_1000318653 401
171 3300005518 Ga0070699_100075742 Ga0070699_1000757422 401
172 3300005518 Ga0070699_100102715 Ga0070699_1001027153 401
173 3300005536 Ga0070697_100028795 Ga0070697_1000287953 401
174 3300005546 Ga0070696_100064507 Ga0070696_1000645073 401
175 3300005549 Ga0070704_100103844 Ga0070704_1001038442 401
176 3300006844 Ga0075428_100002295 Ga0075428_10000229520 401
177 3300009094 Ga0111539_10002907 Ga0111539_1000290712 401
178 3300025906 Ga0207699_10009542 Ga0207699_100095423 401
179 3300025910 Ga0207684_10065557 Ga0207684_100655573 401
180 3300025916 Ga0207663_10000116 Ga0207663_1000011616 401
181 3300025922 Ga0207646_10000035 Ga0207646_1000003576 401
182 3300027907 Ga0207428_10004521 Ga0207428_100045218 401
183 3300035111 Ga0373923_0039805 Ga0373923_0039805_24_1316 401
184 3300042876 Ga0451577_0222904 Ga0451577_0222904_281_1555 401
185 3300044673 Ga0453683_0073961 Ga0453683_0073961_56_1285 401
186 3300047322 Ga0495680_0023038 Ga0495680_0023038_666_1958 401
187 3300049576 Ga0501040_0064866 Ga0501040_0064866_170_1399 401
188 3300050511 nmdc:mga08y16_3296_c1 nmdc:mga08y16_3296_c1_9511_10740 401
189 3300050514 nmdc:mga08x19_17608_c1 nmdc:mga08x19_17608_c1_525_1784 401
190 3300005336 Ga0070680_100088540 Ga0070680_1000885403 402
191 3300005518 Ga0070699_100027809 Ga0070699_1000278093 402
192 3300005530 Ga0070679_100010950 Ga0070679_1000109508 402
193 3300009553 Ga0105249_10233712 Ga0105249_102337122 402
194 3300025917 Ga0207660_10071380 Ga0207660_100713802 402
195 3300025961 Ga0207712_10032489 Ga0207712_100324892 402
196 3300048911 Ga0496108_0010595 Ga0496108_0010595_2557_3861 402
197 3300005577 Ga0068857_100046110 Ga0068857_1000461103 403
198 3300026116 Ga0207674_10058400 Ga0207674_100584002 403
199 3300005341 Ga0070691_10017599 Ga0070691_100175992 404
200 3300005577 Ga0068857_100004093 Ga0068857_10000409315 404
201 3300022467 Ga0224712_10003520 Ga0224712_100035202 404
202 3300026116 Ga0207674_10079690 Ga0207674_100796902 404
203 3300028800 Ga0265338_10011591 Ga0265338_100115914 404
204 3300035724 Ga0373933_0007913 Ga0373933_0007913_2432_3703 405
205 3300044658 Ga0466972_0037389 Ga0466972_0037389_382_1659 405
206 3300044684 Ga0466966_0040693 Ga0466966_0040693_1643_2920 405
207 3300044706 Ga0466964_0001661 Ga0466964_0001661_1269_2546 405
208 3300044735 Ga0466968_0024726 Ga0466968_0024726_406_1683 405
209 3300044765 Ga0466970_0006414 Ga0466970_0006414_3867_5144 405
210 3300005467 Ga0070706_100004009 Ga0070706_1000040096 406
211 3300005518 Ga0070699_100234529 Ga0070699_1002345291 406
212 3300006852 Ga0075433_10134206 Ga0075433_101342062 406
213 3300025910 Ga0207684_10006996 Ga0207684_100069967 406
214 3300005334 Ga0068869_100039917 Ga0068869_1000399173 407
215 3300009147 Ga0114129_10067425 Ga0114129_100674251 407
216 3300025942 Ga0207689_10005504 Ga0207689_100055046 407
217 3300044842 Ga0466957_0056405 Ga0466957_0056405_149_1426 407
218 3300050507 nmdc:mga05p37_137274_c1 nmdc:mga05p37_137274_c1_1071_2342 407
219 3300005844 Ga0068862_100018942 Ga0068862_1000189425 410
220 3300006871 Ga0075434_100036200 Ga0075434_1000362002 410
221 3300007076 Ga0075435_100071359 Ga0075435_1000713592 410
222 3300009094 Ga0111539_10000380 Ga0111539_1000038011 410
223 3300027907 Ga0207428_10000226 Ga0207428_1000022656 410
224 3300028380 Ga0268265_10011998 Ga0268265_100119985 410
225 3300042876 Ga0451577_0004365 Ga0451577_0004365_6664_7926 410
226 3300044673 Ga0453683_0033547 Ga0453683_0033547_1008_2270 410
227 3300044712 Ga0453684_0017077 Ga0453684_0017077_3920_5182 410
228 3300045051 Ga0451576_0026068 Ga0451576_0026068_746_2008 410
229 3300050511 nmdc:mga08y16_7252_c1 nmdc:mga08y16_7252_c1_5957_7219 410
230 3300050512 nmdc:mga0n895_4362_c1 nmdc:mga0n895_4362_c1_9039_10301 410
231 3300050515 nmdc:mga0a205_150187_c1 nmdc:mga0a205_150187_c1_883_2145 410
232 3300049573 Ga0501037_0003205 Ga0501037_0003205_3504_4796 412
233 3300049581 Ga0501047_0086197 Ga0501047_0086197_1045_2337 412
234 3300025910 Ga0207684_10042317 Ga0207684_100423172 413
235 3300053077 Ga0495601_0047641 Ga0495601_0047641_609_1970 413
236 3300053078 Ga0495612_0045846 Ga0495612_0045846_53_1414 413
237 3300005536 Ga0070697_100255742 Ga0070697_1002557421 414
238 3300005330 Ga0070690_100051682 Ga0070690_1000516823 421
239 3300005341 Ga0070691_10070202 Ga0070691_100702021 421
240 3300005347 Ga0070668_100059571 Ga0070668_1000595712 421
241 3300005356 Ga0070674_100003378 Ga0070674_1000033785 421
242 3300025903 Ga0207680_10028439 Ga0207680_100284392 421
243 3300026118 Ga0207675_100003944 Ga0207675_1000039449 421
244 3300005444 Ga0070694_100010217 Ga0070694_1000102172 425
245 3300005328 Ga0070676_10004983 Ga0070676_100049832 426
246 3300006173 Ga0070716_100000649 Ga0070716_1000006499 426
247 3300006852 Ga0075433_10002436 Ga0075433_100024369 426
248 3300006871 Ga0075434_100001124 Ga0075434_10000112411 426
249 3300009147 Ga0114129_10115212 Ga0114129_101152122 426
250 3300025922 Ga0207646_10019830 Ga0207646_100198303 426
251 3300050507 nmdc:mga05p37_312027_c1 nmdc:mga05p37_312027_c1_28_1338 426

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18603

LAL_C2

L-amino acid ligase C-terminal domain 2

379

454

0.95

PF13535

ATP-grasp_4

ATP-grasp domain

182

341

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vot-assembly2.cif.gz_B crystal structure of l-amino acid ligase from bacillus licheniformis 0.8526 23 426
3vot-assembly1.cif.gz_A crystal structure of l-amino acid ligase from bacillus licheniformis 0.8433 23 426
3vot-assembly2.cif.gz_B crystal structure of l-amino acid ligase from bacillus licheniformis 0.8405 23 426
3vot-assembly1.cif.gz_A crystal structure of l-amino acid ligase from bacillus licheniformis 0.8278 23 426
3ax6-assembly1.cif.gz_B crystal structure of n5-carboxyaminoimidazole ribonucleotide synthetase from thermotoga maritima 0.8026 22 426
ID Description Score Start End Superfamily
3df7A02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.8622 212 307 3.30.470.20
3votB02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.8464 119 426 3.30.470.20
af_Q4CSN5_223_453_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.8424 211 422 3.30.470.20
3wo0A03 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.8423 212 330 3.30.470.20
3votB02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.841 119 426 3.30.470.20
ID Description Score Start End GO Terms
AF-A0A535FU80-F1-model_v4 ATP-grasp domain-containing protein 0.9836 211 426 GO:0005524
GO:0016874
GO:0046872
AF-A0A7C2WB21-F1-model_v4 Phosphoribosylglycinamide synthetase 0.9816 344 426
AF-A0A3L7XMP5-F1-model_v4 ATP-grasp domain-containing protein 0.9726 22 426 GO:0005524
GO:0016874
GO:0046872
AF-A0A2V3HHI1-F1-model_v4 L-amino acid ligase C-terminal domain-containing protein 0.9673 350 426
AF-A0A7V9GHI9-F1-model_v4 ATP-grasp domain-containing protein 0.9655 71 426 GO:0005524
GO:0016874
GO:0046872

Feature Viewer

pLDDT pTM Quality
90.22 0.89 High
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Predicted Structure (AlphaFold2)

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